Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	TranscriptID	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov_SOL	TVarCov_SOL	NTotCov_SOL	NVarCov_SOL	dbSNPPopFreq	COSMIC_Gene_Freq
A1BG	1	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	58864542	58864542	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	A1BG	NM_130786	exon3	c.T92A	p.L31Q	.	.	73	39	104	0	.	90
ABCA12	26154	broad.mit.edu;bcgsc.ca;mdanderson.org	37	2	215815649	215815649	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ABCA12	NM_173076	exon45	c.A6806G	p.K2269R	.	.	219	21	302	1	.	99
ABCC5	10057	bcgsc.ca	37	3	183655698	183655698	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ABCC5	NM_005688	exon26	c.G3845A	p.G1282D	.	.	151	6	125	0	.	137
ABCD2	225	bcgsc.ca	37	12	39998721	39998721	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ABCD2	NM_005164	exon4	c.A1248G	p.L416L	.	.	109	5	125	0	.	95
ABCG8	64241	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	44073332	44073332	+	Silent	SNP	G	G	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ABCG8	NM_022437	exon3	c.G204T	p.L68L	.	.	115	44	157	1	.	94
ACACA	31	bcgsc.ca	37	17	35506836	35506836	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ACACA	NM_198834	exon45	c.G5631A	p.Q1877Q	.	.	69	4	116	0	.	154
ACAT2	39	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	160196246	160196246	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ACAT2	NM_005891	exon5	c.G535C	p.D179H	.	.	118	73	70	0	.	91
ACSF2	80221	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	48551103	48551103	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ACSF2	NM_025149	exon13	c.A1553G	p.E518G	.	.	96	40	109	0	.	68
ACTA1	58	bcgsc.ca	37	1	229567639	229567639	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ACTA1	NM_001100	exon6	c.G819A	p.S273S	.	.	75	4	79	0	.	90
ACTL8	81569	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	18152300	18152300	+	Silent	SNP	G	G	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ACTL8	NM_030812	exon3	c.G387C	p.L129L	.	.	123	52	120	0	.	72
ADAM18	8749	bcgsc.ca	37	8	39535050	39535050	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ADAM18	NM_014237	exon15	c.A1626G	p.E542E	.	.	89	4	90	1	.	228
ADAM2	2515	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	39644537	39644537	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ADAM2	NM_001464	exon10	c.C847A	p.Q283K	.	.	308	110	392	0	.	227
ADAM7	8756	bcgsc.ca	37	8	24346800	24346800	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ADAM7	NM_003817	exon12	c.A1220G	p.N407S	.	.	147	5	179	0	.	230
ADAMTS10	81794	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	8651042	8651042	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ADAMTS10	NM_030957	exon22	c.G2624A	p.R875K	.	.	63	22	71	0	.	229
ADAMTS8	11095	bcgsc.ca	37	11	130278363	130278363	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ADAMTS8	NM_007037	exon8	c.A2095G	p.T699A	.	.	51	4	46	0	.	226
ADAMTSL3	57188	bcgsc.ca	37	15	84539681	84539681	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ADAMTSL3	NM_207517	exon9	c.A930G	p.P310P	.	.	62	4	98	0	.	1153
ADGB	79747	bcgsc.ca	37	6	146993545	146993545	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_024694	exon8	c.A1029G	p.K343K	.	.	121	5	208	0	.	.
ADORA2B	136	bcgsc.ca	37	17	15878415	15878415	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ADORA2B	NM_000676	exon2	c.T758C	p.V253A	.	.	143	5	281	0	.	228
AHNAK	79026	bcgsc.ca	37	11	62294980	62294980	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	AHNAK	NM_001620	exon5	c.T6909C	p.P2303P	.	.	187	6	236	1	.	109
AKT2	208	ucsc.edu	37	19	40741974	40741974	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	AKT2	NM_001626	exon11	c.G998A	p.W333X	.	.	52	4	72	0	.	978
AMPD2	271	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	110171048	110171048	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	AMPD2	NM_004037	exon11	c.C1500T	p.S500S	.	.	40	4	51	0	.	292
ANAPC4	29945	bcgsc.ca	37	4	25418068	25418068	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ANAPC4	NM_013367	exon27	c.A1923G	p.A641A	.	.	171	5	218	0	.	293
ANGEL1	23357	bcgsc.ca	37	14	77275553	77275553	+	Silent	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ANGEL1	NM_015305	exon2	c.G498T	p.V166V	.	.	56	4	83	0	.	93
ANK1	286	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	41559138	41559138	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ANK1	NM_001142446	exon22	c.A2490G	p.L830L	.	.	85	31	148	0	.	716
ANKRD44	91526	bcgsc.ca	37	2	197866494	197866494	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ANKRD44	NM_001195144	exon22	c.T2418C	p.T806T	.	.	54	4	85	0	.	230
ANKRD7	56311	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	7	117865018	117865018	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ANKRD7	NM_019644	exon1	c.T134C	p.L45P	.	.	187	8	177	0	.	90
ANKS1B	56899	bcgsc.ca	37	12	100200477	100200477	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_152788	exon4	c.A374G	p.N125S	.	.	104	6	139	0	.	.
APMAP	57136	broad.mit.edu;bcgsc.ca	37	20	24952125	24952125	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_020531	exon5	c.A509G	p.K170R	.	.	83	4	108	0	.	.
AQP9	366	bcgsc.ca	37	15	58471329	58471329	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	AQP9	NM_020980	exon5	c.G498A	p.V166V	.	.	79	4	127	0	.	91
ARHGAP10	79658	bcgsc.ca	37	4	148968102	148968102	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ARHGAP10	NM_024605	exon20	c.T1927C	p.S643P	.	.	104	8	95	3	.	229
ARHGEF7	8874	bcgsc.ca	37	13	111932653	111932653	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ARHGEF7	NM_001113511	exon15	c.A1604G	p.K535R	.	.	78	4	138	2	.	232
ARMC8	25852	bcgsc.ca	37	3	138003278	138003278	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ARMC8	NM_015396	exon20	c.G1689A	p.L563L	.	.	80	6	96	0	.	90
ASXL3	80816	bcgsc.ca	37	18	31325770	31325770	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ASXL3	NM_030632	exon12	c.A5958G	p.L1986L	.	.	92	4	121	0	.	49
ATF7IP	55729	bcgsc.ca	37	12	14609508	14609508	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ATF7IP	NM_018179	exon7	c.C2009T	p.P670L	.	.	13	3	21	0	.	252
ATM	472	broad.mit.edu	37	11	108216510	108216510	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ATM	NM_000051	exon58	c.T8459C	p.F2820S	.	.	215	6	243	0	.	3419
ATP2B3	492	bcgsc.ca	37	X	152807860	152807860	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ATP2B3	NM_001001344	exon4	c.T744C	p.S248S	.	.	140	5	204	0	.	109
ATP2B4	493	broad.mit.edu;bcgsc.ca	37	1	203667458	203667481	+	In_Frame_Del	DEL	CGCCCTGCTGGTGAAGAAAATGAA	CGCCCTGCTGGTGAAGAAAATGAA	-	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	CGCCCTGCTGGTGAAGAAAATGAA	CGCCCTGCTGGTGAAGAAAATGAA	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ATP2B4	NM_001001396	exon3	c.367_390del	p.123_130del	.	.	254	12	278	0	.	517
ATP7A	538	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	77243771	77243771	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ATP7A	NM_000052	exon3	c.T154A	p.Y52N	.	.	232	66	292	0	.	130
AURKB	9212	bcgsc.ca	37	17	8109934	8109934	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	AURKB	NM_004217	exon7	c.T561C	p.A187A	.	.	74	4	180	1	.	1508
AVL9	23080	bcgsc.ca	37	7	32584319	32584319	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	AVL9	NM_015060	exon3	c.T228C	p.F76F	.	.	182	6	162	1	.	90
AVL9	23080	broad.mit.edu	37	7	32598586	32598586	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	AVL9	NM_015060	exon10	c.G725T	p.R242L	.	.	232	6	214	0	.	90
AZIN1	51582	ucsc.edu	37	8	103841636	103841636	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	AZIN1	NM_015878	exon12	c.A1099G	p.S367G	.	.	207	1	260	1	.	90
BCL7A	605	bcgsc.ca	37	12	122473253	122473253	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	BCL7A	NM_020993	exon3	c.A191G	p.K64R	.	.	106	5	257	2	.	685
BDP1	55814	bcgsc.ca	37	5	70763305	70763305	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	BDP1	NM_018429	exon6	c.T910C	p.S304P	.	.	86	4	87	0	.	92
BDP1	55814	bcgsc.ca	37	5	70782317	70782317	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	BDP1	NM_018429	exon9	c.A1076G	p.K359R	.	.	272	7	217	1	.	92
BDP1	55814	bcgsc.ca	37	5	70855844	70855844	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	BDP1	NM_018429	exon37	c.T7276C	p.S2426P	.	.	193	6	178	1	.	92
BEND3	57673	bcgsc.ca	37	6	107390221	107390221	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	BEND3	NM_001080450	exon5	c.A2174G	p.E725G	.	.	119	6	161	0	.	71
BLM	641	bcgsc.ca	37	15	91310172	91310172	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	BLM	NM_000057	exon10	c.T2226C	p.T742T	.	.	234	8	262	0	.	664
BMPER	168667	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	34097695	34097695	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	BMPER	NM_133468	exon11	c.A952T	p.N318Y	.	.	422	125	346	0	.	92
BPTF	2186	broad.mit.edu	37	17	65889673	65889673	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	BPTF	NM_004459	exon8	c.G2621A	p.R874K	.	.	542	13	576	0	.	94
BRD1	23774	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	50169282	50169282	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	BRD1	NM_014577	exon11	c.G2950C	p.E984Q	.	.	105	28	124	1	.	91
BZRAP1	9256	bcgsc.ca	37	17	56400052	56400052	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	BZRAP1	NM_004758	exon9	c.T1280C	p.L427P	.	.	73	6	117	0	.	229
C10orf105	414152	bcgsc.ca	37	10	73475941	73475941	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_001168390	exon2	c.T154C	p.C52R	.	.	56	4	85	0	.	.
C10orf62	414157	bcgsc.ca	37	10	99349684	99349684	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	C10orf62	NM_001009997	exon1	c.A30G	p.R10R	.	.	88	4	117	0	.	90
C11orf16	56673	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	8947426	8947426	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	C11orf16	NM_020643	exon5	c.T788C	p.F263S	.	.	49	19	66	0	.	92
C11orf80	79703	bcgsc.ca	37	11	66526518	66526518	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_024650	exon4	c.T474C	p.A158A	.	.	72	4	96	0	.	.
C12orf40	283461	bcgsc.ca	37	12	40078695	40078695	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	C12orf40	NM_001031748	exon10	c.A1313G	p.H438R	.	.	61	4	82	0	.	96
C16orf82	162083	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	27078698	27078698	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_001145545	exon1	c.G382T	p.G128C	.	.	35	14	36	0	.	.
C18orf8	29919	bcgsc.ca	37	18	21106620	21106620	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	C18orf8	NM_013326	exon13	c.A1080G	p.Q360Q	.	.	92	4	111	0	.	91
C21orf90	114043	broad.mit.edu;ucsc.edu;bcgsc.ca	37	21	45937720	45937720	+	RNA	SNP	T	T	A	rs183543214	by1000genomes	TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NR_026548	exon1	c.621+2T>A	.	.	.	124	45	203	0	T|0.999;A|0.000	.
C2orf74	339804	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	61389694	61389694	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_001143959	exon1	c.A66G	p.L22L	.	.	420	196	421	0	.	.
C5	727	bcgsc.ca	37	9	123776302	123776302	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	C5	NM_001735	exon17	c.A2106G	p.G702G	.	.	136	6	114	0	.	92
C9orf96	169436	bcgsc.ca	37	9	136260822	136260822	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	C9orf96	NM_153710	exon9	c.T798C	p.D266D	.	.	48	4	71	0	.	334
CA5B	11238	bcgsc.ca	37	X	15768240	15768240	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CA5B	NM_007220	exon2	c.A94G	p.R32G	.	.	94	7	98	1	.	130
CACNA1B	774	broad.mit.edu;bcgsc.ca	37	9	140991060	140991060	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CACNA1B	NM_001243812	exon36	c.C5219A	p.A1740E	.	.	75	6	81	0	.	138
CACNA1E	777	bcgsc.ca	37	1	181725092	181725092	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CACNA1E	NM_001205293	exon29	c.A3990G	p.I1330M	.	.	128	5	103	0	.	95
CACNA1H	8912	broad.mit.edu;mdanderson.org	37	16	1263819	1263819	+	Missense_Mutation	SNP	C	C	T	rs59286323		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CACNA1H	NM_021098	exon27	c.C4817T	p.T1606M	.	.	75	28	55	0	C|0.998;T|0.002	67
CACNB2	783	bcgsc.ca	37	10	18439884	18439884	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CACNB2	NM_201596	exon2	c.T193C	p.S65P	.	.	162	5	216	0	.	154
CADM3	57863	bcgsc.ca	37	1	159161835	159161835	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CADM3	NM_021189	exon3	c.T300C	p.A100A	.	.	63	4	57	0	.	92
CARD10	29775	bcgsc.ca	37	22	37900256	37900256	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CARD10	NM_014550	exon9	c.T1571C	p.F524S	.	.	118	10	105	1	.	662
CASP7	840	bcgsc.ca	37	10	115451775	115451775	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CASP7	NM_033338	exon2	c.A45G	p.E15E	.	.	68	5	87	0	.	660
CASZ1	54897	ucsc.edu;bcgsc.ca	37	1	10699837	10699837	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CASZ1	NM_001079843	exon21	c.A4442G	p.H1481R	.	.	43	4	100	1	.	113
CAV2	858	bcgsc.ca	37	7	116139963	116139963	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CAV2	NM_001233	exon1	c.A128G	p.H43R	.	.	102	6	82	0	.	90
CCDC43	124808	bcgsc.ca	37	17	42761292	42761292	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_001099225	exon2	c.T240C	p.I80I	.	.	159	5	189	0	.	.
CCDC63	160762	bcgsc.ca	37	12	111345198	111345198	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CCDC63	NM_152591	exon12	c.A1610G	p.E537G	.	.	49	4	53	0	.	134
CCDC93	54520	bcgsc.ca	37	2	118766163	118766163	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CCDC93	NM_019044	exon2	c.G114A	p.G38G	.	.	139	5	175	1	.	154
CCT6A	908	bcgsc.ca	37	7	56120153	56120153	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CCT6A	NM_001762	exon2	c.A176G	p.D59G	.	.	198	7	241	0	.	91
CD248	57124	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	66082959	66082959	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CD248	NM_020404	exon1	c.C1540G	p.P514A	.	.	160	68	189	0	.	154
CDHR4	389118	bcgsc.ca	37	3	49832133	49832133	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_001007540	exon10	c.T1187C	p.V396A	.	.	145	7	190	1	.	.
CDK5RAP1	51654	bcgsc.ca	37	20	31967330	31967330	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CDK5RAP1	NM_016408	exon8	c.C1044T	p.S348S	.	.	65	4	76	0	.	230
CELF1	10658	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	11	47504291	47504291	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CELF1	NM_001172639	exon9	c.G721T	p.G241X	.	.	206	89	274	0	.	92
CEP164	22897	bcgsc.ca	37	11	117263796	117263796	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CEP164	NM_001271933	exon19	c.A2579G	p.E860G	.	.	68	5	80	0	.	69
CHD3	1107	bcgsc.ca	37	17	7811325	7811325	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CHD3	NM_001005271	exon34	c.G5317A	p.G1773S	.	.	65	4	158	0	.	228
CHD5	26038	bcgsc.ca	37	1	6173045	6173045	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CHD5	NM_015557	exon34	c.T4926C	p.P1642P	.	.	53	4	99	0	.	719
CHEK2	11200	broad.mit.edu;bcgsc.ca	37	22	29120997	29120997	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CHEK2	NM_001005735	exon5	c.C689T	p.S230F	.	.	310	8	273	0	.	1515
CHGB	1114	bcgsc.ca	37	20	5902990	5902990	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CHGB	NM_001819	exon4	c.A200G	p.D67G	.	.	83	4	116	0	.	96
CHIA	27159	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	111861754	111861754	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CHIA	NM_201653	exon10	c.C928T	p.L310L	.	.	219	69	273	2	.	91
CHMP6	79643	bcgsc.ca	37	17	78968866	78968866	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CHMP6	NM_024591	exon3	c.T221C	p.L74P	.	.	133	6	132	1	.	91
CHN2	1124	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	29519792	29519792	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CHN2	NM_001039936	exon1	c.G66A	p.Q22Q	.	.	257	70	212	1	.	229
CHST6	4166	bcgsc.ca	37	16	75513482	75513482	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CHST6	NM_021615	exon3	c.A245G	p.Q82R	.	.	100	5	97	2	.	90
CKMT2	1160	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	80548514	80548514	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CKMT2	NM_001825	exon4	c.C153A	p.S51R	.	.	51	36	42	0	.	90
CLCA1	1179	bcgsc.ca	37	1	86954850	86954850	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CLCA1	NM_001285	exon8	c.A1354G	p.T452A	.	.	83	5	103	0	.	91
CLCN6	1185	bcgsc.ca	37	1	11893696	11893696	+	Splice_Site	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CLCN6	NM_001286	exon14	c.1372+1G>A	.	.	.	62	4	86	0	.	90
CLEC4G	339390	ucsc.edu	37	19	7795272	7795272	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CLEC4G	NM_198492	exon6	c.T443C	p.L148P	.	.	47	4	64	0	.	90
CLPS	1208	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	35762977	35762977	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CLPS	NM_001832	exon3	c.C285T	p.S95S	.	.	192	49	248	0	.	90
CLSTN2	64084	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	140178531	140178531	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CLSTN2	NM_022131	exon7	c.T1142C	p.I381T	.	.	90	39	84	0	.	157
CLTB	1212	bcgsc.ca	37	5	175823497	175823497	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CLTB	NM_007097	exon5	c.T501C	p.A167A	.	.	179	7	126	0	.	90
CMPK1	51727	broad.mit.edu;bcgsc.ca	37	1	47834285	47834285	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CMPK1	NM_016308	exon2	c.A316G	p.R106G	.	.	110	7	128	0	.	116
CMTM2	146225	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	66613710	66613710	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CMTM2	NM_001199317	exon1	c.G200T	p.G67V	.	.	95	41	111	0	.	91
CNBD2	140894	ucsc.edu	37	20	34568520	34568520	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_080834	exon4	c.T383C	p.L128P	.	.	43	4	66	0	.	.
CNGB1	1258	bcgsc.ca	37	16	57931334	57931334	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CNGB1	NM_001297	exon31	c.C3209T	p.P1070L	.	.	69	4	97	0	.	137
CNTN5	53942	bcgsc.ca	37	11	100211251	100211251	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CNTN5	NM_001243270	exon21	c.A2787G	p.R929R	.	.	119	6	132	0	.	366
COL18A1	80781	bcgsc.ca	37	21	46931080	46931080	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	COL18A1	NM_030582	exon41	c.T4280C	p.L1427P	.	.	116	5	154	0	.	90
COL18A1	80781	ucsc.edu;bcgsc.ca	37	21	46917553	46917553	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	COL18A1	NM_030582	exon31	c.A3201G	p.E1067E	.	.	38	4	48	0	.	90
COL19A1	1310	bcgsc.ca	37	6	70897841	70897841	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	COL19A1	NM_001858	exon47	c.A2919G	p.T973T	.	.	92	5	151	1	.	156
COL4A4	1286	broad.mit.edu;mdanderson.org	37	2	227892673	227892673	+	Silent	SNP	A	A	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	COL4A4	NM_000092	exon42	c.T4026A	p.P1342P	.	.	68	34	72	0	.	142
COL5A3	50509	bcgsc.ca	37	19	10116335	10116335	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	COL5A3	NM_015719	exon4	c.T493C	p.C165R	.	.	91	5	83	0	.	99
COPS7B	64708	bcgsc.ca	37	2	232663642	232663642	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	COPS7B	NM_022730	exon6	c.C604T	p.H202Y	.	.	176	6	245	1	.	228
COX2	5743	bcgsc.ca	37	MT	7727	7727	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	ENST00000361739	exon1	c.A142G	p.T48A	.	.	71	4	353	3	.	.
CPNE9	151835	bcgsc.ca	37	3	9754685	9754685	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CPNE9	.	.	.	.	.	.	51	4	59	0	.	70
CPT2	1376	bcgsc.ca	37	1	53675750	53675750	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CPT2	NM_000098	exon4	c.T404C	p.M135T	.	.	82	4	124	0	.	90
CSMD1	64478	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	8	3565967	3565967	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CSMD1	NM_033225	exon7	c.978delC	p.P326fs	.	.	158	56	171	0	.	86
CTNNB1	1499	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	3	41266124	41266124	+	Missense_Mutation	SNP	A	A	G	rs121913412	bycluster	TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	CTNNB1,gallbladder,other,0	CTNNB1	NM_001098209	exon3	c.A121G	p.T41A	.	.	200	13	239	1	.	24361
CUBN	8029	bcgsc.ca	37	10	16960689	16960689	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CUBN	NM_001081	exon45	c.T6932C	p.V2311A	.	.	90	4	112	0	.	166
CUL7	9820	bcgsc.ca	37	6	43017229	43017229	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CUL7	NM_001168370	exon7	c.T1993C	p.S665P	.	.	147	8	152	1	.	229
CYP11A1	1583	bcgsc.ca	37	15	74637425	74637425	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CYP11A1	NM_000781	exon3	c.G585A	p.S195S	.	.	80	6	101	1	.	92
CYP2W1	54905	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	1026794	1026794	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CYP2W1	NM_017781	exon6	c.C871A	p.L291M	.	.	80	34	86	0	.	90
CYP4F22	126410	bcgsc.ca	37	19	15662164	15662164	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	CYP4F22	NM_173483	exon14	c.T1478C	p.L493P	.	.	206	8	292	0	.	92
CYTB	0	bcgsc.ca	37	MT	15346	15346	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	ENST00000361789	exon1	c.G600A	p.L200L	.	.	63	4	338	1	.	.
DACT1	51339	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	59112430	59112430	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	DACT1	NM_016651	exon4	c.C1089G	p.N363K	.	.	75	29	72	0	.	291
DARC	2532	ucsc.edu;bcgsc.ca;mdanderson.org	37	1	159175494	159175494	+	Missense_Mutation	SNP	C	C	A	rs34599082	byfrequency;alternate_allele	TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	DARC	NM_001122951	exon1	c.C271A	p.R91S	.	.	285	91	239	1	C|0.991;T|0.009	659
DCHS2	54798	bcgsc.ca	37	4	155256186	155256186	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	DCHS2	NM_001142552	exon4	c.A2547G	p.Q849Q	.	.	89	4	112	0	.	94
DCHS2	54798	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	155156800	155156800	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	DCHS2	NM_017639	exon25	c.T7639G	p.F2547V	.	.	157	61	192	0	.	94
DDHD2	23259	bcgsc.ca	37	8	38092054	38092054	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	DDHD2	NM_001164232	exon3	c.A363G	p.K121K	.	.	166	7	256	2	.	91
DENND4A	10260	broad.mit.edu;bcgsc.ca	37	15	66030225	66030225	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	DENND4A	NM_001144823	exon7	c.A860G	p.K287R	.	.	211	7	213	2	.	229
DHCR7	1717	bcgsc.ca	37	11	71149962	71149962	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	DHCR7	NM_001163817	exon7	c.A794T	p.H265L	.	.	53	4	54	0	.	228
DHRS12	79758	bcgsc.ca	37	13	52351214	52351214	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	DHRS12	NM_001270424	exon6	c.A492G	p.K164K	.	.	47	4	47	0	.	90
DHTKD1	55526	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	12131171	12131171	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	DHTKD1	NM_018706	exon5	c.C904T	p.R302C	.	.	49	12	57	0	.	515
DIS3	22894	ucsc.edu;bcgsc.ca	37	13	73355910	73355910	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	DIS3	NM_001128226	exon1	c.C61T	p.R21C	.	.	40	4	59	0	.	90
DLG5	9231	bcgsc.ca	37	10	79584212	79584212	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	DLG5	NM_004747	exon14	c.A2312G	p.N771S	.	.	85	4	122	1	.	98
DNAH10	196385	bcgsc.ca	37	12	124256199	124256199	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	DNAH10	NM_207437	exon3	c.A167G	p.E56G	.	.	83	4	150	0	.	95
DNAH11	8701	bcgsc.ca	37	7	21677263	21677263	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	DNAH11	.	.	.	.	.	.	274	7	251	1	.	146
DNAH1	25981	bcgsc.ca	37	3	52391915	52391915	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	DNAH1	NM_015512	exon24	c.T3982C	p.F1328L	.	.	115	6	137	1	.	67
DNAH1	25981	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	3	52394057	52394057	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	DNAH1	NM_015512	exon27	c.4533delG	p.V1511fs	.	.	93	20	99	0	.	67
DNAH2	146754	ucsc.edu	37	17	7679433	7679433	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	DNAH2	NM_020877	exon30	c.A4913G	p.K1638R	.	.	34	4	47	0	.	102
DNAH6	1768	bcgsc.ca	37	2	84928343	84928343	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	DNAH6	NM_001370	exon49	c.C7941T	p.S2647S	.	.	93	5	114	0	.	69
DNAH8	1769	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	38738285	38738285	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	DNAH8	NM_001206927	exon12	c.G1714A	p.E572K	.	.	112	11	102	0	.	615
DNAJA2	10294	bcgsc.ca	37	16	46993036	46993036	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	DNAJA2	NM_005880	exon8	c.T926C	p.V309A	.	.	57	4	61	0	.	226
DNMT3B	1789	bcgsc.ca	37	20	31375220	31375220	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	DNMT3B	NM_175850	exon6	c.A653G	p.E218G	.	.	160	7	185	1	.	660
DNPEP	23549	bcgsc.ca	37	2	220246306	220246306	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	DNPEP	NM_012100	exon12	c.G1098A	p.L366L	.	.	112	5	130	0	.	90
DOCK10	55619	bcgsc.ca	37	2	225651808	225651808	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	DOCK10	NM_014689	exon50	c.A5586G	p.K1862K	.	.	129	6	140	1	.	92
DOCK10	55619	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	225721666	225721666	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	DOCK10	NM_014689	exon15	c.C1719G	p.D573E	.	.	161	61	230	0	.	92
DROSHA	29102	bcgsc.ca	37	5	31448688	31448688	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	DROSHA	NM_013235	exon22	c.T2848C	p.S950P	.	.	49	4	46	0	.	227
DSCAM	1826	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	21	41725559	41725559	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	DSCAM	NM_001271534	exon5	c.A767G	p.Y256C	.	.	56	24	74	0	.	101
DSG4	147409	bcgsc.ca	37	18	28968449	28968449	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	DSG4	NM_001134453	exon4	c.T336C	p.T112T	.	.	128	5	136	0	.	177
DUS3L	56931	ucsc.edu;bcgsc.ca	37	19	5789643	5789643	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	DUS3L	NM_020175	exon3	c.G475A	p.G159S	.	.	48	4	39	0	.	90
DUSP22	56940	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	348816	348816	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	DUSP22	NM_020185	exon7	c.T483A	p.D161E	.	.	161	50	175	1	.	252
ECE2	9718	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	183976322	183976322	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ECE2	NM_032331	exon3	c.G727T	p.D243Y	.	.	101	35	113	1	.	94
EDA	1896	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	69249366	69249366	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	EDA	NM_001399	exon5	c.A719T	p.K240I	.	.	143	56	216	0	.	195
EFCAB13	124989	bcgsc.ca	37	17	45452025	45452025	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_152347	exon12	c.T1065C	p.L355L	.	.	149	5	200	0	.	.
EFCAB13	124989	broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	45479548	45479548	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_152347	exon18	c.C1996T	p.R666C	.	.	98	43	133	2	.	.
EFCAB13	124989	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	17	45479563	45479563	+	Nonsense_Mutation	DEL	T	T	-	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_152347	exon18	c.2011delT	p.L671X	.	.	97	39	120	0	.	.
EIF5B	9669	bcgsc.ca	37	2	99988179	99988179	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	EIF5B	NM_015904	exon9	c.A1538G	p.E513G	.	.	89	4	89	1	.	93
ELMO2	63916	bcgsc.ca	37	20	45021758	45021758	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ELMO2	NM_182764	exon5	c.A217G	p.T73A	.	.	93	4	122	1	.	91
EML4	27436	bcgsc.ca	37	2	42472814	42472814	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	EML4	NM_001145076	exon2	c.A195G	p.S65S	.	.	120	5	150	0	.	3734
ENPP7	339221	ucsc.edu	37	17	77709040	77709040	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ENPP7	NM_178543	exon3	c.T598C	p.S200P	.	.	38	4	41	0	.	92
EPB41L4B	54566	bcgsc.ca	37	9	112020559	112020559	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	EPB41L4B	NM_019114	exon7	c.A650G	p.E217G	.	.	61	4	68	0	.	92
EPHB1	2047	bcgsc.ca	37	3	134881020	134881020	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	EPHB1	NM_004441	exon7	c.A1583G	p.D528G	.	.	68	4	74	1	.	1492
ERBB2IP	55914	bcgsc.ca	37	5	65349642	65349642	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ERBB2IP	NM_001253699	exon21	c.T2496C	p.S832S	.	.	125	5	141	1	.	653
ERCC8	1161	bcgsc.ca	37	5	60194224	60194224	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ERCC8	NM_000082	exon9	c.A722G	p.N241S	.	.	112	5	96	0	.	227
ERRFI1	54206	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	1	8074176	8074182	+	Frame_Shift_Del	DEL	GGCTTCA	GGCTTCA	-	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	GGCTTCA	GGCTTCA	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ERRFI1	NM_018948	exon4	c.477_483del	p.159_161del	.	.	41	18	138	0	.	91
ETHE1	23474	bcgsc.ca	37	19	44030790	44030790	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ETHE1	NM_014297	exon2	c.A103G	p.T35A	.	.	58	4	60	0	.	90
EXT1	2131	bcgsc.ca	37	8	118842494	118842494	+	Missense_Mutation	SNP	T	T	C	rs147847222		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	EXT1	NM_000127	exon4	c.A1259G	p.E420G	.	.	88	5	110	1	T|1.000;C|0.000	660
EYA3	2140	bcgsc.ca	37	1	28320047	28320047	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	EYA3	NM_001990	exon14	c.T1167C	p.G389G	.	.	74	4	88	0	.	93
EYA4	2070	bcgsc.ca	37	6	133769314	133769314	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	EYA4	NM_172105	exon5	c.A274G	p.T92A	.	.	160	5	208	0	.	578
FAM129C	199786	bcgsc.ca	37	19	17660293	17660293	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	FAM129C	NM_001098524	exon15	c.T1800C	p.T600T	.	.	67	4	94	0	.	90
FAM135A	57579	bcgsc.ca	37	6	71235440	71235440	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	FAM135A	NM_001162529	exon13	c.A2653G	p.T885A	.	.	52	4	83	0	.	90
FAM160A1	729830	bcgsc.ca	37	4	152570808	152570808	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_001109977	exon11	c.C1615A	p.L539M	.	.	48	4	46	0	.	.
FAM27L	284123	ucsc.edu;bcgsc.ca	37	17	21826327	21826327	+	RNA	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	.	.	.	.	.	.	47	4	40	0	.	.
FAM65A	79567	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	16	67572365	67572365	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	FAM65A	NM_001193523	exon2	c.G76A	p.V26M	.	.	128	59	156	0	.	92
FAM65C	140876	bcgsc.ca	37	20	49227722	49227722	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	FAM65C	NM_080829	exon5	c.A356G	p.D119G	.	.	95	4	150	1	.	92
FAN1	22909	bcgsc.ca	37	15	31197594	31197594	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	FAN1	NM_001146095	exon2	c.A728G	p.K243R	.	.	103	6	123	0	.	90
FANCM	57697	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	45665463	45665463	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	FANCM	NM_020937	exon21	c.G5429T	p.R1810I	.	.	134	62	195	0	.	569
FAT2	2196	bcgsc.ca	37	5	150908836	150908836	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	FAT2	NM_001447	exon14	c.A9929G	p.N3310S	.	.	129	5	126	0	.	96
FAT4	79633	bcgsc.ca	37	4	126389682	126389682	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	FAT4	NM_024582	exon11	c.A11915G	p.H3972R	.	.	72	4	72	0	.	108
FER1L6	654463	bcgsc.ca	37	8	125015462	125015462	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	FER1L6	NM_001039112	exon13	c.T1575C	p.A525A	.	.	169	5	206	0	.	100
FER	2241	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	108203627	108203627	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	FER	NM_005246	exon6	c.T641C	p.M214T	.	.	237	126	237	0	.	946
FGF14	2259	bcgsc.ca	37	13	103053829	103053829	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	FGF14	NM_175929	exon1	c.A200G	p.N67S	.	.	138	5	179	0	.	586
FOXP3	50943	bcgsc.ca	37	X	49112235	49112235	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	FOXP3	NM_014009	exon7	c.G676A	p.E226K	.	.	146	6	151	0	.	226
FRAS1	80144	bcgsc.ca	37	4	79410178	79410178	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	FRAS1	NM_025074	exon59	c.T8902C	p.F2968L	.	.	89	5	84	0	.	68
FREM1	158326	broad.mit.edu;bcgsc.ca;mdanderson.org	37	9	14868953	14868953	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	FREM1	NM_144966	exon3	c.C23A	p.A8D	.	.	10	5	17	0	.	138
FRMD5	84978	bcgsc.ca	37	15	44202095	44202095	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	FRMD5	NM_032892	exon5	c.G412A	p.A138T	.	.	26	3	48	0	.	91
FRRS1L	23732	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	111899753	111899753	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_014334	exon5	c.A1017G	p.L339L	.	.	91	34	141	0	.	.
FRS2	10818	bcgsc.ca	37	12	69965067	69965067	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	FRS2	NM_001042555	exon8	c.T265C	p.F89L	.	.	61	4	93	0	.	658
FRS3	10817	bcgsc.ca	37	6	41739679	41739679	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	FRS3	NM_006653	exon6	c.T439C	p.F147L	.	.	35	4	34	0	.	92
FTCD	10841	bcgsc.ca	37	21	47570437	47570437	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	FTCD	NM_206965	exon6	c.A639G	p.P213P	.	.	92	5	125	0	.	92
FYCO1	79443	bcgsc.ca	37	3	46014600	46014600	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	FYCO1	NM_024513	exon6	c.T519C	p.A173A	.	.	66	4	97	0	.	91
GABRA3	2556	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	X	151424438	151424438	+	Silent	SNP	T	T	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	GABRA3	NM_000808	exon5	c.A363T	p.T121T	.	.	139	10	191	0	.	131
GAD1	2571	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	171715379	171715379	+	Silent	SNP	T	T	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	GAD1	NM_000817	exon16	c.T1587A	p.P529P	.	.	152	61	217	0	.	91
GADL1	339896	bcgsc.ca	37	3	30842405	30842405	+	Missense_Mutation	SNP	A	A	G	rs146013145	alternate_allele	TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	GADL1	NM_207359	exon12	c.T1226C	p.V409A	.	.	59	4	64	0	A|1.000;C|0.000	90
GALNT8	26290	bcgsc.ca	37	12	4848458	4848458	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	GALNT8	NM_017417	exon3	c.G639A	p.L213L	.	.	77	5	83	0	.	230
GAREML	150946	bcgsc.ca	37	2	26407424	26407424	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_001168241	exon4	c.G707T	p.R236L	.	.	69	4	97	0	.	.
GGA2	23062	ucsc.edu;bcgsc.ca	37	16	23504772	23504772	+	Missense_Mutation	SNP	T	T	C	rs145830611		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	GGA2	NM_015044	exon4	c.A260G	p.E87G	.	.	39	4	79	0	T|1.000;C|0.000	91
GGT7	2686	bcgsc.ca	37	20	33444658	33444658	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	GGT7	NM_178026	exon8	c.C1053A	p.F351L	.	.	61	4	80	0	.	91
GIT1	28964	bcgsc.ca	37	17	27903640	27903640	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	GIT1	NM_001085454	exon14	c.T1307A	p.L436Q	.	.	103	6	135	0	.	251
GJA10	84694	bcgsc.ca	37	6	90605155	90605155	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	GJA10	NM_032602	exon1	c.C968A	p.S323Y	.	.	86	5	138	0	.	90
GLB1	2720	bcgsc.ca	37	3	33110426	33110426	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	GLB1	NM_000404	exon3	c.A282G	p.G94G	.	.	110	7	105	2	.	135
GLI2	2736	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	121740293	121740293	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	GLI2	NM_005270	exon10	c.T1520C	p.F507S	.	.	68	22	77	1	.	954
GLO1	2739	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	6	38650627	38650627	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	GLO1	NM_006708	exon4	c.G333A	p.E111E	.	.	119	11	151	0	.	227
GLO1	2739	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	38650599	38650599	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	GLO1	NM_006708	exon4	c.G361C	p.D121H	.	.	120	17	135	0	.	227
GLRA4	441509	bcgsc.ca	37	X	102979519	102979519	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	GLRA4	NM_001024452	exon3	c.A220G	p.T74A	.	.	205	6	221	0	.	108
GMDS	2762	bcgsc.ca	37	6	1742766	1742766	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	GMDS	NM_001500	exon8	c.G826A	p.G276R	.	.	73	4	95	0	.	90
GNB1	2782	ucsc.edu;bcgsc.ca	37	1	1721849	1721849	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	GNB1	NM_002074	exon9	c.C684T	p.D228D	.	.	66	6	104	0	.	227
GNPNAT1	64841	bcgsc.ca	37	14	53251344	53251344	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	GNPNAT1	NM_198066	exon2	c.T25C	p.F9L	.	.	126	5	169	0	.	90
GPATCH2	55105	bcgsc.ca	37	1	217783709	217783709	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	GPATCH2	NM_018040	exon5	c.T1052C	p.M351T	.	.	144	6	150	1	.	91
GPATCH2L	55668	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	76662254	76662254	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_017926	exon9	c.A1227G	p.S409S	.	.	53	17	81	0	.	.
GPATCH8	23131	bcgsc.ca	37	17	42478294	42478294	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	GPATCH8	NM_001002909	exon8	c.A1151G	p.E384G	.	.	97	5	144	0	.	94
GPD1L	23171	bcgsc.ca	37	3	32169681	32169681	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	GPD1L	NM_015141	exon2	c.A161G	p.D54G	.	.	112	6	146	0	.	90
GPR114	221188	bcgsc.ca	37	16	57608907	57608907	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	GPR114	NM_153837	exon11	c.C1389T	p.T463T	.	.	62	4	91	0	.	90
GPR179	440435	bcgsc.ca	37	17	36499246	36499246	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	GPR179	NM_001004334	exon1	c.A427G	p.R143G	.	.	72	4	101	0	.	93
GPR85	54329	bcgsc.ca	37	7	112724418	112724418	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	GPR85	NM_001146265	exon3	c.A359G	p.Y120C	.	.	129	5	128	0	.	91
GRIA3	2892	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	122616686	122616686	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	GRIA3	NM_000828	exon15	c.G2476A	p.G826S	.	.	171	73	216	0	.	134
GRIK2	2898	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	6	102516324	102516324	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	GRIK2	NM_021956	exon16	c.G2665A	p.E889K	.	.	161	14	161	0	.	157
GTDC1	79712	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	144903285	144903285	+	Silent	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	GTDC1	NM_001006636	exon5	c.G201T	p.V67V	.	.	66	19	103	0	.	91
HARS2	23438	bcgsc.ca	37	5	140071250	140071250	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	HARS2	NM_012208	exon1	c.T17C	p.L6P	.	.	162	7	161	0	.	90
HAUS2	55142	ucsc.edu;bcgsc.ca	37	15	42853492	42853492	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	HAUS2	NM_018097	exon4	c.G281T	p.S94I	.	.	39	4	63	0	.	90
HBP1	26959	bcgsc.ca	37	7	106840637	106840637	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	HBP1	NM_001244262	exon10	c.A1448G	p.K483R	.	.	142	5	144	0	.	91
HEBP2	23593	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	138734131	138734131	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	HEBP2	NM_014320	exon4	c.C534T	p.G178G	.	.	133	33	166	0	.	90
HIF3A	64344	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	46832675	46832675	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	HIF3A,brain,glioma,0	HIF3A	NM_152795	exon12	c.G1652T	p.C551F	.	.	56	25	59	0	.	228
HIVEP1	3096	bcgsc.ca	37	6	12164308	12164308	+	Missense_Mutation	SNP	G	G	T	rs181056704	alternate_allele	TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	HIVEP1	NM_002114	exon9	c.G7771T	p.A2591S	.	.	83	4	119	0	G|0.999;A|0.001	139
HK3	3101	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	176308382	176308382	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	HK3	NM_002115	exon18	c.A2548G	p.K850E	.	.	152	40	124	4	.	294
HMCN1	83872	bcgsc.ca	37	1	185966647	185966647	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	HMCN1	NM_031935	exon25	c.C3865A	p.P1289T	.	.	73	4	66	0	.	113
HOXC5	3222	bcgsc.ca	37	12	54428263	54428263	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	HOXC5	NM_018953	exon2	c.A656G	p.K219R	.	.	71	4	85	0	.	90
HPR	3250	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	72110626	72110626	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	HPR	NM_020995	exon5	c.C693T	p.N231N	.	.	148	70	229	0	.	515
HSD17B11	51170	hgsc.bcm.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	88293884	88293884	+	Silent	SNP	C	C	A	rs114331860	byfrequency;alternate_allele	TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	HSD17B11	NM_016245	exon4	c.G534T	p.S178S	.	.	131	60	186	0	C|0.995;T|0.005	92
HTR2A	3356	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	47409332	47409332	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	HTR2A	NM_000621	exon4	c.C1056T	p.S352S	.	.	154	48	202	0	.	519
HTRA2	27429	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	2	74757336	74757336	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	HTRA2	NM_013247	exon1	c.C203G	p.P68R	.	.	77	31	73	0	.	91
HTT	3064	hgsc.bcm.edu;bcgsc.ca	37	4	3209019	3209019	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	HTT	NM_002111	exon45	c.6087delC	p.A2029fs	.	.	65	0	93	0	.	281
HTT	3064	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	4	3209018	3209019	+	Frame_Shift_Ins	INS	-	-	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	HTT	NM_002111	exon45	c.6086_6087insA	p.A2029fs	.	.	65	19	93	0	.	281
IFIH1	64135	bcgsc.ca	37	2	163174367	163174367	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	IFIH1	NM_022168	exon1	c.C451T	p.R151W	.	.	49	4	67	0	.	91
IFT88	8100	broad.mit.edu;bcgsc.ca	37	13	21264933	21264933	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	IFT88	NM_175605	exon27	c.A2359G	p.S787G	.	.	86	5	140	0	.	91
IGDCC4	57722	bcgsc.ca	37	15	65681207	65681207	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	IGDCC4	NM_020962	exon15	c.G2646A	p.L882L	.	.	108	5	100	0	.	93
IGF2BP1	10642	bcgsc.ca	37	17	47119611	47119611	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	IGF2BP1	NM_006546	exon9	c.G949T	p.D317Y	.	.	112	5	119	0	.	226
IL1RAPL1	11141	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	29973331	29973331	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	IL1RAPL1	NM_014271	exon11	c.A1485T	p.R495S	.	.	243	91	340	0	.	134
IL20RA	53832	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	137323493	137323493	+	Splice_Site	SNP	C	C	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	IL20RA	NM_014432	exon8	c.865-1G>C	.	.	.	49	7	61	0	.	94
INO80	54617	bcgsc.ca	37	15	41377783	41377783	+	Splice_Site	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	INO80	NM_017553	exon8	c.659-2A>G	.	.	.	254	8	409	1	.	72
INTS1	26173	bcgsc.ca	37	7	1513956	1513956	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_001080453	exon41	c.C5677T	p.H1893Y	.	.	62	4	63	0	.	.
INTS1	26173	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	1539152	1539152	+	Silent	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_001080453	exon6	c.G801T	p.L267L	.	.	55	38	51	0	.	.
INTS6	26512	bcgsc.ca	37	13	51969554	51969554	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	INTS6	NM_012141	exon5	c.T495C	p.D165D	.	.	88	4	124	0	.	227
IPO4	79711	bcgsc.ca	37	14	24653057	24653057	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	IPO4	NM_024658	exon19	c.T1917C	p.S639S	.	.	155	5	193	0	.	226
IQCA1	79781	bcgsc.ca	37	2	237272451	237272451	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	IQCA1	NM_001270585	exon15	c.T1865C	p.L622P	.	.	146	6	184	2	.	23
IRS4	8471	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	107977031	107977031	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	IRS4	NM_003604	exon1	c.C2544A	p.N848K	.	.	230	72	301	1	.	623
ISX	91464	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	35463259	35463259	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ISX	NM_001008494	exon1	c.C179T	p.A60V	.	.	101	37	83	0	.	95
ITGAM	3684	bcgsc.ca	37	16	31273026	31273026	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ITGAM	NM_000632	exon2	c.T42C	p.C14C	.	.	82	4	107	0	.	226
ITIH1	3697	bcgsc.ca	37	3	52819080	52819080	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ITIH1	NM_002215	exon12	c.C1428T	p.A476A	.	.	78	4	95	0	.	93
ITPRIPL1	150771	bcgsc.ca	37	2	96992826	96992826	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ITPRIPL1	NM_178495	exon1	c.G481A	p.V161I	.	.	157	6	176	0	.	69
KAT6B	23522	bcgsc.ca	37	10	76789577	76789577	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_012330	exon18	c.T4995C	p.S1665S	.	.	63	4	94	1	.	.
KCNAB2	8514	bcgsc.ca	37	1	6150478	6150478	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	KCNAB2	NM_001199862	exon9	c.C544T	p.L182L	.	.	51	4	108	0	.	514
KIAA0319L	79932	bcgsc.ca	37	1	35919228	35919228	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	KIAA0319L	NM_024874	exon12	c.A1843G	p.S615G	.	.	198	6	267	0	.	92
KIAA0368	23392	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	114213731	114213731	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	KIAA0368	NM_001080398	exon4	c.A661G	p.S221G	.	.	165	66	243	0	.	68
KIAA1549L	25758	bcgsc.ca	37	11	33564526	33564526	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_012194	exon1	c.T526C	p.S176P	.	.	63	4	75	1	.	.
KIF13A	63971	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	17828535	17828535	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	KIF13A	NM_001105567	exon14	c.C1468G	p.Q490E	.	.	192	54	268	0	.	137
KIR2DL1	3802	bcgsc.ca	37	19	55286869	55286869	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	KIR2DL1	NM_014218	exon4	c.A623G	p.E208G	.	.	85	4	124	0	.	90
KIT	3815	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	55598063	55598063	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	KIT	NM_000222	exon16	c.C2260T	p.P754S	.	.	138	50	182	0	.	20166
KLC2	64837	bcgsc.ca	37	11	66031165	66031165	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	KLC2	NM_022822	exon6	c.C787T	p.L263F	.	.	58	4	66	0	.	90
KY	339855	bcgsc.ca	37	3	134348516	134348516	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	KY	NM_178554	exon4	c.T284C	p.V95A	.	.	149	6	186	0	.	24
LAMA3	3909	bcgsc.ca	37	18	21495254	21495254	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	LAMA3	NM_198129	exon59	c.T7646C	p.L2549P	.	.	194	6	239	0	.	100
LAMB1	3912	bcgsc.ca	37	7	107591725	107591725	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	LAMB1	NM_002291	exon24	c.A3337G	p.T1113A	.	.	121	7	117	0	.	97
LAMB4	22798	bcgsc.ca	37	7	107745056	107745056	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	LAMB4	NM_007356	exon9	c.T879C	p.G293G	.	.	133	6	90	0	.	140
LAMC3	10319	bcgsc.ca	37	9	133963138	133963138	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	LAMC3	NM_006059	exon27	c.A4411G	p.I1471V	.	.	60	4	82	0	.	93
LCN8	138307	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	139651621	139651621	+	Splice_Site	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	LCN8	NM_178469	exon3	c.25-1G>T	.	.	.	52	21	79	0	.	91
LINC00152	112597	broad.mit.edu;ucsc.edu	37	2	87779835	87779835	+	RNA	SNP	G	G	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	.	.	.	.	.	.	100	35	167	0	.	.
LOC100996307	0	bcgsc.ca	37	19	43064659	43064659	+	RNA	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	.	.	.	.	.	.	75	4	113	0	.	.
LOC646813	0	ucsc.edu	37	11	50375381	50375381	+	RNA	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	.	.	.	.	.	.	156	56	223	1	.	.
LOC729739	0	ucsc.edu	37	15	74654111	74654111	+	RNA	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	.	.	.	.	.	.	24	4	43	0	.	.
LPAR6	10161	bcgsc.ca	37	13	48985904	48985904	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	LPAR6	NM_001162497	exon5	c.G656T	p.R219I	.	.	90	4	99	0	.	1138
LRIG3	121227	bcgsc.ca	37	12	59308046	59308046	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	LRIG3	NM_153377	exon2	c.T308C	p.V103A	.	.	63	4	98	0	.	229
LRRC37BP1	147172	broad.mit.edu	37	17	28960380	28960380	+	RNA	SNP	A	A	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	.	.	.	.	.	.	152	62	228	0	.	.
LRRC8D	55144	broad.mit.edu	37	1	90399966	90399966	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	LRRC8D	NM_018103	exon3	c.A1339G	p.R447G	.	.	37	3	44	0	.	92
LRRC8D	55144	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	90399468	90399468	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	LRRC8D	NM_018103	exon3	c.G841A	p.G281R	.	.	52	17	75	0	.	92
LZTS3	0	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	20	3147349	3147349	+	Splice_Site	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_014731	exon2	c.459+2T>C	.	.	.	70	23	95	0	.	.
LZTS3	0	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	3146846	3146846	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_014731	exon2	c.C620T	p.T207I	.	.	108	41	131	0	.	.
MACC1	346389	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	20199316	20199316	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MACC1	NM_182762	exon5	c.G668T	p.G223V	.	.	257	74	225	0	.	93
MAGEC1	9947	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	X	140993822	140993822	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MAGEC1	NM_005462	exon4	c.T632C	p.L211S	.	.	780	108	998	0	.	133
MAGOHB	55110	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	10766087	10766087	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MAGOHB	NM_018048	exon1	c.C45T	p.H15H	.	.	74	32	88	0	.	153
MAP1B	4131	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	71491564	71491564	+	Silent	SNP	T	T	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MAP1B	NM_005909	exon5	c.T2382A	p.A794A	.	.	77	42	66	0	.	155
MAP1B	4131	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	71494133	71494133	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MAP1B	NM_005909	exon5	c.C4951A	p.Q1651K	.	.	138	33	128	0	.	155
MAP3K10	4294	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	40704415	40704415	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MAP3K10	NM_002446	exon2	c.G816A	p.P272P	.	.	63	20	111	0	.	981
MAP3K19	80122	bcgsc.ca	37	2	135744006	135744006	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_025052	exon7	c.A2436G	p.E812E	.	.	85	4	100	0	.	.
MAP3K4	4216	bcgsc.ca	37	6	161507465	161507465	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MAP3K4	NM_006724	exon8	c.A2427G	p.R809R	.	.	90	4	92	0	.	548
MAP4K3	8491	broad.mit.edu	37	2	39542531	39542531	+	Splice_Site	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MAP4K3	NM_003618	exon14	c.919-2A>G	.	.	.	256	8	263	0	.	550
MARCH7	64844	bcgsc.ca	37	2	160619442	160619442	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MARCH7	NM_022826	exon8	c.T1945C	p.L649L	.	.	122	6	107	0	.	68
MBOAT1	154141	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	20151445	20151445	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MBOAT1	NM_001080480	exon3	c.G294T	p.M98I	.	.	75	32	128	0	.	68
MBTPS1	8720	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	84124541	84124541	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MBTPS1	NM_003791	exon8	c.G970A	p.E324K	.	.	151	66	189	0	.	92
MCM10	55388	bcgsc.ca	37	10	13246274	13246274	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MCM10	NM_182751	exon18	c.A2411G	p.Y804C	.	.	176	6	268	1	.	653
MCM3AP	8888	bcgsc.ca	37	21	47663561	47663561	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MCM3AP	NM_003906	exon24	c.T5114C	p.V1705A	.	.	92	4	135	0	.	291
MCM8	84515	bcgsc.ca	37	20	5932775	5932775	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MCM8	NM_032485	exon2	c.T114C	p.P38P	.	.	62	4	55	0	.	227
MED24	9862	bcgsc.ca	37	17	38191585	38191585	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MED24	NM_014815	exon6	c.A344G	p.E115G	.	.	61	5	58	1	.	187
MELK	9833	bcgsc.ca	37	9	36589573	36589573	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MELK	NM_001256688	exon4	c.A185G	p.K62R	.	.	70	5	126	0	.	760
MEP1A	4224	bcgsc.ca	37	6	46777243	46777243	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MEP1A	NM_005588	exon6	c.A349G	p.S117G	.	.	150	6	196	0	.	183
METTL9	51108	bcgsc.ca	37	16	21636384	21636384	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	METTL9	NM_016025	exon4	c.A699G	p.R233R	.	.	123	5	145	0	.	91
MGAT5B	146664	bcgsc.ca	37	17	74936576	74936576	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MGAT5B	NM_198955	exon12	c.1704delG	p.P568fs	.	.	91	0	124	0	.	93
MGAT5B	146664	bcgsc.ca	37	17	74936577	74936577	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MGAT5B	NM_198955	exon12	c.C1705A	p.P569T	.	.	90	0	121	1	.	93
MGAT5B	146664	hgsc.bcm.edu	37	17	74936580	74936580	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MGAT5B	NM_198955	exon12	c.1708delC	p.H570fs	.	.	90	0	122	0	.	93
MINOS1	440574	bcgsc.ca	37	1	19950011	19950011	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_001032363	exon3	c.A156G	p.G52G	.	.	148	5	158	0	.	.
MIOS	54468	bcgsc.ca	37	7	7613818	7613818	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MIOS	NM_019005	exon5	c.T1384C	p.S462P	.	.	113	5	124	0	.	90
MLL3	58508	bcgsc.ca	37	7	151843754	151843754	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MLL3	NM_170606	exon53	c.T13961C	p.F4654S	.	.	83	4	63	0	.	1398
MMP10	4319	bcgsc.ca	37	11	102650406	102650406	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MMP10	NM_002425	exon2	c.T176C	p.I59T	.	.	214	6	216	0	.	713
MON1B	22879	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	77228415	77228415	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MON1B	NM_014940	exon4	c.G659A	p.R220H	.	.	94	34	111	0	.	90
MORN5	254956	bcgsc.ca	37	9	124936908	124936908	+	Splice_Site	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MORN5	NM_198469	exon4	c.439+2T>C	.	.	.	45	4	73	0	.	90
MOSPD1	56180	bcgsc.ca	37	X	134025553	134025553	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MOSPD1	NM_019556	exon5	c.T566C	p.L189P	.	.	240	7	329	2	.	194
MPZL3	196264	bcgsc.ca	37	11	118111080	118111080	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MPZL3	NM_198275	exon2	c.T86C	p.V29A	.	.	120	5	130	0	.	68
MRPL1	65008	bcgsc.ca	37	4	78873722	78873722	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MRPL1	NM_020236	exon9	c.A939G	p.K313K	.	.	117	5	152	0	.	90
MRPS14	63931	bcgsc.ca	37	1	174983957	174983957	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MRPS14	NM_022100	exon3	c.C235T	p.P79S	.	.	95	5	70	0	.	186
MSANTD3-TMEFF1	100526694	bcgsc.ca	37	9	103271328	103271328	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_001198812	exon3	c.C570T	p.D190D	.	.	159	6	254	0	.	.
MTRR	4552	broad.mit.edu;bcgsc.ca	37	5	7900138	7900138	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MTRR	NM_024010	exon15	c.A2145G	p.E715E	.	.	214	6	225	0	.	91
MUC6	4588	bcgsc.ca	37	11	1016628	1016628	+	Missense_Mutation	SNP	G	G	A	rs202039948		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MUC6	NM_005961	exon31	c.C6173T	p.T2058I	.	.	892	26	976	23	.	23
MYCBPAP	84073	bcgsc.ca	37	17	48604665	48604665	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MYCBPAP	NM_032133	exon15	c.T2316C	p.P772P	.	.	100	5	157	0	.	230
MYCN	4613	bcgsc.ca	37	2	16082440	16082440	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MYCN	NM_005378	exon2	c.A254G	p.N85S	.	.	28	4	27	0	.	1271
MYL6	4637	bcgsc.ca	37	12	56554056	56554056	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MYL6	NM_079423	exon5	c.A379G	p.M127V	.	.	105	5	135	0	.	91
MYO1H	283446	bcgsc.ca	37	12	109848570	109848570	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_001101421	exon12	c.T1359C	p.I453I	.	.	61	4	77	0	.	.
MYO7B	4648	bcgsc.ca	37	2	128341768	128341768	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MYO7B	NM_001080527	exon13	c.T1415C	p.M472T	.	.	127	5	156	0	.	47
MYOC	4653	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	171621608	171621608	+	Missense_Mutation	SNP	C	C	A	rs74315339	bycluster	TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	MYOC	NM_000261	exon1	c.G144T	p.Q48H	.	.	239	81	246	1	.	226
MYRF	745	bcgsc.ca	37	11	61551034	61551034	+	Silent	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_001127392	exon23	c.C3081A	p.S1027S	.	.	54	4	89	0	.	.
NBEAL1	65065	bcgsc.ca	37	2	204016207	204016207	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	NBEAL1	NM_001114132	exon34	c.T5395C	p.W1799R	.	.	90	4	100	0	.	92
ND5	0	bcgsc.ca	37	MT	12705	12705	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	ENST00000361567	exon1	c.C369T	p.I123I	.	.	73	4	321	0	.	.
ND5	0	broad.mit.edu;bcgsc.ca	37	MT	12684	12684	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	ENST00000361567	exon1	c.G348A	p.Q116Q	.	.	77	5	341	0	.	.
NEB	4703	bcgsc.ca	37	2	152514559	152514559	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	NEB	NM_004543	exon48	c.G6121A	p.D2041N	.	.	157	5	184	0	.	145
NEDD4	4734	bcgsc.ca	37	15	56134151	56134151	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	NEDD4	NM_198400	exon12	c.T2860C	p.L954L	.	.	78	4	109	1	.	723
NEFH	4744	bcgsc.ca	37	22	29879381	29879381	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	NEFH	NM_021076	exon2	c.T901C	p.S301P	.	.	113	5	109	1	.	90
NEUROD4	58158	bcgsc.ca	37	12	55420615	55420615	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	NEUROD4	NM_021191	exon2	c.T392C	p.L131P	.	.	57	4	76	0	.	94
NFX1	4799	bcgsc.ca	37	9	33319117	33319117	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	NFX1	NM_147134	exon9	c.G1898A	p.G633D	.	.	40	4	56	0	.	91
NFYA	4800	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	41051832	41051832	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	NFYA	NM_002505	exon4	c.C210G	p.I70M	.	.	126	49	143	0	.	226
NID1	4811	bcgsc.ca	37	1	236195902	236195902	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	NID1	NM_002508	exon6	c.A1336G	p.S446G	.	.	175	8	177	1	.	154
NLRC4	58484	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	32475575	32475575	+	Missense_Mutation	SNP	C	C	T	rs200929188		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	NLRC4,NS,carcinoma,-1	NLRC4	NM_001199138	exon4	c.G1358A	p.R453Q	.	.	158	60	188	0	C|0.999;T|0.000	276
NLRP13	126204	bcgsc.ca	37	19	56407331	56407331	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	NLRP13	NM_176810	exon11	c.A3112G	p.R1038G	.	.	134	6	181	0	.	211
NLRP14	338323	bcgsc.ca	37	11	7065071	7065071	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	NLRP14	NM_176822	exon4	c.T1814C	p.V605A	.	.	168	6	152	0	.	295
NLRP3	114548	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	247588697	247588697	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	NLRP3	NM_183395	exon3	c.C1952A	p.P651H	.	.	261	85	243	0	.	674
NOL10	79954	bcgsc.ca	37	2	10811781	10811781	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_001261394	exon6	c.T363C	p.F121F	.	.	156	5	190	0	.	.
NOL4	8715	bcgsc.ca	37	18	31463280	31463280	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	NOL4	NM_003787	exon10	c.G1651T	p.G551W	.	.	191	5	198	0	.	93
NOL6	65083	bcgsc.ca	37	9	33463862	33463862	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	NOL6	NM_022917	exon23	c.G2961A	p.Q987Q	.	.	63	4	106	0	.	92
NOP14	8602	ucsc.edu;bcgsc.ca	37	4	2948151	2948151	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	NOP14	NM_003703	exon11	c.A1623G	p.P541P	.	.	54	8	80	7	.	91
NOP56	10528	bcgsc.ca	37	20	2638576	2638576	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	NOP56	NM_006392	exon12	c.A1421G	p.E474G	.	.	182	6	249	0	.	92
NOSTRIN	115677	bcgsc.ca	37	2	169721365	169721365	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	NOSTRIN	NM_001171631	exon21	c.A1577G	p.E526G	.	.	76	4	90	0	.	90
NPAP1	23742	broad.mit.edu	37	15	24921405	24921405	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_018958	exon1	c.C391A	p.R131S	.	.	34	6	43	0	.	.
NPC1	4864	bcgsc.ca	37	18	21120455	21120455	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	NPC1	NM_000271	exon17	c.A2561G	p.N854S	.	.	78	4	81	0	.	92
NR2F2	7026	bcgsc.ca	37	15	96877826	96877826	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	NR2F2	NM_021005	exon2	c.A964G	p.T322A	.	.	74	6	87	0	.	228
NRP2	8828	bcgsc.ca	37	2	206605246	206605246	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	NRP2	NM_201279	exon8	c.T1150C	p.F384L	.	.	76	4	102	0	.	93
NT5C1B	93034	bcgsc.ca	37	2	18765882	18765882	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	NT5C1B	NM_001199087	exon5	c.G852T	p.Q284H	.	.	49	4	56	0	.	47
NTRK2	4915	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	87570246	87570246	+	Silent	SNP	G	G	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	NTRK2	NM_006180	exon19	c.G1986T	p.T662T	.	.	38	14	41	0	.	1404
NUP188	23511	bcgsc.ca	37	9	131721380	131721380	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	NUP188	NM_015354	exon8	c.A552G	p.E184E	.	.	63	4	128	0	.	207
NUP205	23165	bcgsc.ca	37	7	135303342	135303342	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	NUP205	NM_015135	exon28	c.G3954A	p.V1318V	.	.	90	4	64	0	.	207
NXNL2	158046	bcgsc.ca	37	9	91159296	91159296	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	NXNL2	NM_001161625	exon2	c.A305G	p.E102G	.	.	78	4	98	0	.	46
OFD1	8481	bcgsc.ca	37	X	13773318	13773318	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	OFD1	NM_003611	exon12	c.A1178G	p.K393R	.	.	95	4	106	0	.	108
OGFRL1	79627	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	6	72003250	72003250	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	OGFRL1	NM_024576	exon3	c.C336G	p.I112M	.	.	216	16	232	0	.	68
OPRM1	4988	bcgsc.ca	37	6	154439816	154439816	+	Splice_Site	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	OPRM1	NM_001145280	exon4	c.865-2A>G	.	.	.	117	5	168	0	.	69
OR10G8	219869	ucsc.edu;bcgsc.ca;mdanderson.org	37	11	123900577	123900577	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	OR10G8	NM_001004464	exon1	c.T248C	p.L83S	.	.	861	312	1006	5	.	92
OR2J3	442186	bcgsc.ca	37	6	29079992	29079992	+	Missense_Mutation	SNP	G	G	A	rs201612570	byfrequency	TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	OR2J3	NM_001005216	exon1	c.G325A	p.A109T	.	.	480	25	590	17	G|0.988;A|0.013	90
OR2L3	391192	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	1	248224574	248224574	+	Silent	SNP	A	A	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	OR2L3	NM_001004687	exon1	c.A591T	p.T197T	.	.	1251	67	1021	0	.	68
OR2L8	391190	ucsc.edu;bcgsc.ca	37	1	248112750	248112750	+	Silent	SNP	A	A	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	OR2L8	NM_001001963	exon1	c.A591T	p.T197T	.	.	324	60	315	0	.	70
OR51T1	401665	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	4903945	4903945	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	OR51T1	NM_001004759	exon1	c.G897T	p.R299S	.	.	178	69	238	0	.	115
OR5P3	120066	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	7846818	7846818	+	Silent	SNP	G	G	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	OR5P3	NM_153445	exon1	c.C702A	p.R234R	.	.	144	63	179	0	.	69
OR7A17	26333	bcgsc.ca	37	19	14991603	14991603	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	OR7A17	NM_030901	exon1	c.T565C	p.C189R	.	.	157	5	176	0	.	68
OR8J1	219477	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	56127796	56127796	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	OR8J1	NM_001005205	exon1	c.T74C	p.I25T	.	.	173	71	167	0	.	70
OR8U1	219417	hgsc.bcm.edu;broad.mit.edu;mdanderson.org	37	11	56143382	56143382	+	Missense_Mutation	SNP	G	G	T	rs77605314	alternate_allele	TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	OR8U1	NM_001005204	exon1	c.G283T	p.D95Y	.	.	66	33	118	0	G|0.500;A|0.500	72
OS9	10956	bcgsc.ca	37	12	58112029	58112029	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	OS9	NM_001261420	exon11	c.A1238G	p.E413G	.	.	115	5	164	2	.	493
OSGEP	55644	bcgsc.ca	37	14	20920152	20920152	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	OSGEP	NM_017807	exon3	c.T392C	p.V131A	.	.	103	5	133	0	.	68
OTOGL	283310	bcgsc.ca	37	12	80764372	80764372	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_173591	exon55	c.A6611G	p.N2204S	.	.	71	4	113	0	.	.
OVCH1	341350	broad.mit.edu;bcgsc.ca	37	12	29649135	29649142	+	Frame_Shift_Del	DEL	TGTGCTGC	TGTGCTGC	-	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	TGTGCTGC	TGTGCTGC	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	OVCH1	NM_183378	exon3	c.253_260del	p.85_87del	.	.	64	8	80	0	.	210
P2RX5	5026	bcgsc.ca	37	17	3591989	3591989	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	P2RX5	NM_002561	exon8	c.A818G	p.H273R	.	.	78	4	159	0	.	22
PACSIN2	11252	bcgsc.ca	37	22	43308075	43308075	+	Silent	SNP	T	T	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PACSIN2	NM_007229	exon2	c.A12T	p.T4T	.	.	79	4	81	0	.	68
PAK6	56924	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	15	40565801	40565801	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PAK6	NM_020168	exon9	c.G1667A	p.W556X	.	.	198	56	243	0	.	996
PARK7	11315	bcgsc.ca	37	1	8031012	8031012	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PARK7	NM_007262	exon5	c.C311A	p.A104D	.	.	128	7	296	0	.	226
PASD1	139135	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	150840760	150840760	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PASD1	NM_173493	exon14	c.A1543T	p.M515L	.	.	253	74	308	0	.	133
PAX1	5075	ucsc.edu;mdanderson.org	37	20	21695194	21695194	+	Missense_Mutation	SNP	C	C	G	rs17861059	byfrequency;alternate_allele	TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PAX1	NM_006192	exon5	c.C1358G	p.P453R	.	.	26	10	18	0	C|0.993;T|0.007	227
PCDH7	5099	broad.mit.edu;mdanderson.org	37	4	30723824	30723824	+	Silent	SNP	G	G	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PCDH7	NM_032457	exon1	c.G780T	p.L260L	.	.	11	7	14	0	.	229
PCDHA1	56147	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	140167846	140167846	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PCDHA1	NM_031410	exon1	c.G1971A	p.P657P	.	.	175	102	163	0	.	23
PCDHA6	56142	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	5	140209428	140209428	+	Silent	SNP	A	A	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PCDHA6	NM_018909	exon1	c.A1752T	p.S584S	.	.	376	19	284	0	.	92
PCGF1	84759	bcgsc.ca	37	2	74732710	74732710	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PCGF1	NM_032673	exon7	c.T620C	p.L207P	.	.	64	4	100	1	.	659
PCNX	22990	bcgsc.ca	37	14	71570336	71570336	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PCNX	NM_014982	exon32	c.T6045C	p.G2015G	.	.	92	5	116	0	.	91
PDE3B	5140	bcgsc.ca	37	11	14882881	14882881	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PDE3B	NM_000922	exon14	c.C2855T	p.T952I	.	.	138	5	110	0	.	90
PDE3B	5140	bcgsc.ca	37	11	14891061	14891061	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PDE3B	NM_000922	exon16	c.T3194C	p.L1065P	.	.	85	4	138	0	.	90
PDE4B	5142	bcgsc.ca	37	1	66713323	66713323	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PDE4B	NM_001037341	exon4	c.T462C	p.S154S	.	.	77	5	86	1	.	92
PDE4DIP	9659	bcgsc.ca	37	1	144886260	144886260	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PDE4DIP	NM_001198832	exon26	c.T3172C	p.S1058P	.	.	179	6	205	0	.	663
PDHX	8050	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	11	35016491	35016491	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PDHX	NM_003477	exon11	c.C1278T	p.D426D	.	.	143	9	182	0	.	226
PDXDC1	23042	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	15103555	15103555	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PDXDC1	NM_015027	exon8	c.G666A	p.E222E	.	.	410	85	582	0	.	91
PDZRN3	23024	bcgsc.ca	37	3	73437126	73437126	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PDZRN3	NM_015009	exon8	c.A1511G	p.E504G	.	.	52	4	51	0	.	232
PECR	55825	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	216930060	216930060	+	Silent	SNP	C	C	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PECR	NM_018441	exon3	c.G399C	p.T133T	.	.	126	55	157	0	.	90
PGP	283871	bcgsc.ca	37	16	2263739	2263739	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PGP	NM_001042371	exon2	c.T956C	p.L319P	.	.	95	4	96	0	.	23
PGR	5241	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	11	100998683	100998683	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PGR	NM_000926	exon1	c.G1119A	p.A373A	.	.	111	42	148	0	.	652
PHEX	5251	broad.mit.edu;bcgsc.ca	37	X	22231077	22231077	+	Splice_Site	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PHEX	NM_000444	exon16	c.1700+2T>C	.	.	.	202	8	272	0	.	132
PHKA1	5255	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	71855112	71855112	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PHKA1	NM_001172436	exon16	c.A1607G	p.N536S	.	.	160	70	189	0	.	134
PHOSPHO2	493911	bcgsc.ca	37	2	170558034	170558034	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PHOSPHO2	NM_001199286	exon4	c.T553C	p.C185R	.	.	50	4	51	0	.	91
PIK3C2B	5287	bcgsc.ca	37	1	204415127	204415127	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PIK3C2B	NM_002646	exon17	c.A2635G	p.T879A	.	.	162	5	145	0	.	1310
PIWIL1	9271	bcgsc.ca	37	12	130834462	130834462	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PIWIL1	NM_004764	exon9	c.T994C	p.F332L	.	.	100	6	110	0	.	92
PIWIL1	9271	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	130842075	130842075	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PIWIL1	NM_004764	exon14	c.A1642G	p.K548E	.	.	185	25	225	0	.	92
PIWIL3	440822	bcgsc.ca	37	22	25121447	25121447	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PIWIL3	NM_001008496	exon17	c.A2072G	p.E691G	.	.	62	4	53	0	.	93
PKD1L2	114780	bcgsc.ca	37	16	81181782	81181782	+	RNA	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PKD1L2	.	.	.	.	.	.	79	5	118	0	.	92
PKHD1L1	93035	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	110454292	110454292	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PKHD1L1	NM_177531	exon35	c.A4261G	p.T1421A	.	.	200	76	245	0	.	145
PKNOX1	5316	bcgsc.ca	37	21	44441510	44441510	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PKNOX1	NM_004571	exon8	c.T818C	p.V273A	.	.	83	4	120	0	.	153
PLEK	5341	bcgsc.ca	37	2	68615551	68615551	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PLEK	NM_002664	exon6	c.C690T	p.S230S	.	.	124	5	121	0	.	91
PLXNA1	5361	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	126708420	126708420	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PLXNA1	NM_032242	exon1	c.G984A	p.L328L	.	.	66	24	83	0	.	93
PLXNA2	5362	bcgsc.ca	37	1	208257765	208257765	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PLXNA2	NM_025179	exon10	c.T2258C	p.L753P	.	.	163	6	121	1	.	92
PLXNB1	5364	broad.mit.edu;bcgsc.ca	37	3	48465123	48465123	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PLXNB1	NM_001130082	exon3	c.898delG	p.A300fs	.	.	28	8	44	0	.	293
PNKD	25953	ucsc.edu;bcgsc.ca	37	2	219204528	219204528	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PNKD	NM_015488	exon3	c.T259C	p.W87R	.	.	61	6	82	0	.	90
POLD1	5424	bcgsc.ca	37	19	50905724	50905724	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	POLD1	NM_002691	exon7	c.A772G	p.T258A	.	.	55	4	111	2	.	840
POLR2G	5436	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	11	62532653	62532653	+	Splice_Site	SNP	G	G	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	POLR2G	NM_002696	exon4	c.283-1G>T	.	.	.	191	13	264	0	.	90
POMGNT1	55624	bcgsc.ca	37	1	46661697	46661697	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	POMGNT1	NM_017739	exon5	c.T407C	p.L136P	.	.	95	4	119	0	.	91
POTEJ	653781	bcgsc.ca;mdanderson.org	37	2	131414451	131414451	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	.	.	.	.	.	.	167	99	253	0	.	.
POU3F2	5454	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	99283990	99283990	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	POU3F2	NM_005604	exon1	c.C1241T	p.P414L	.	.	35	19	56	0	.	90
PPFIA3	8541	broad.mit.edu;bcgsc.ca;mdanderson.org	37	19	49631685	49631685	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PPFIA3	NM_003660	exon3	c.A302G	p.E101G	.	.	94	43	118	16	.	226
PPM1H	57460	bcgsc.ca	37	12	63182099	63182099	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PPM1H	NM_020700	exon4	c.A776G	p.E259G	.	.	85	4	84	0	.	637
PPP1R12A	4659	bcgsc.ca	37	12	80226248	80226248	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PPP1R12A	NM_002480	exon4	c.A511G	p.K171E	.	.	93	4	161	0	.	273
PPP1R2P3	153743	ucsc.edu;bcgsc.ca	37	5	156277794	156277794	+	RNA	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	.	.	.	.	.	.	359	203	302	0	.	.
PPP1R42	286187	bcgsc.ca	37	8	67922951	67922951	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_001013626	exon5	c.A551G	p.K184R	.	.	79	5	141	0	.	.
PPP6C	5537	bcgsc.ca	37	9	127915949	127915949	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PPP6C	NM_001123355	exon7	c.A643G	p.T215A	.	.	54	4	53	0	.	227
PRDM16	63976	bcgsc.ca	37	1	3348654	3348654	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PRDM16	NM_022114	exon16	c.T3646C	p.L1216L	.	.	70	4	148	0	.	660
PRDX1	5052	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	45977037	45977037	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PRDX1	NM_181696	exon6	c.C564T	p.V188V	.	.	105	43	126	1	.	514
PREX2	80243	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	69104677	69104677	+	Silent	SNP	G	G	A	rs138983574	byfrequency	TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PREX2	NM_024870	exon37	c.G4521A	p.G1507G	.	.	79	21	88	0	G|0.999;A|0.001	390
PRKAR2A	5576	bcgsc.ca	37	3	48810482	48810482	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PRKAR2A	NM_004157	exon6	c.A602G	p.D201G	.	.	153	6	201	1	.	1108
PRPF40B	25766	bcgsc.ca	37	12	50037660	50037660	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PRPF40B	NM_001031698	exon25	c.A2459G	p.E820G	.	.	89	4	113	0	.	95
PSME4	23198	bcgsc.ca	37	2	54120827	54120827	+	Missense_Mutation	SNP	C	C	T	rs201669390		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PSME4	NM_014614	exon35	c.G4022A	p.R1341H	.	.	194	6	270	0	C|0.999;T|0.001	275
PSME4	23198	broad.mit.edu	37	2	54159004	54159004	+	Silent	SNP	T	T	C	rs141014596		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PSME4	NM_014614	exon10	c.A1284G	p.R428R	.	.	127	5	165	1	T|1.000;C|0.000	275
PTPRM	5797	ucsc.edu	37	18	8113742	8113742	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PTPRM	NM_001105244	exon12	c.T2115C	p.A705A	.	.	44	5	68	0	.	228
PTPRQ	374462	ucsc.edu;bcgsc.ca	37	12	81004255	81004255	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_001145026	exon25	c.C4253T	p.S1418L	.	.	41	4	34	0	.	.
PTPRS	5802	bcgsc.ca	37	19	5231475	5231475	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PTPRS	NM_002850	exon14	c.A2001G	p.E667E	.	.	59	6	62	0	.	357
PXT1	222659	bcgsc.ca	37	6	36359628	36359628	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PXT1	NM_152990	exon5	c.T324C	p.D108D	.	.	59	4	84	0	.	90
PYGM	5837	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	64520562	64520562	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	PYGM	NM_005609	exon12	c.G1501T	p.A501S	.	.	134	50	195	0	.	92
PYY2	23615	bcgsc.ca	37	17	26554420	26554420	+	RNA	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	.	.	.	.	.	.	101	5	104	0	.	.
RABEP1	9135	ucsc.edu;bcgsc.ca	37	17	5235401	5235401	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	RABEP1	NM_004703	exon3	c.A321G	p.K107K	.	.	33	4	55	0	.	659
RALGAPB	57148	bcgsc.ca	37	20	37182682	37182682	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	RALGAPB	NM_020336	exon22	c.T3335C	p.L1112P	.	.	167	5	178	0	.	92
RAPGEF2	9693	bcgsc.ca	37	4	160251548	160251548	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	RAPGEF2	NM_014247	exon7	c.C882A	p.F294L	.	.	127	5	155	0	.	637
RARS	5917	broad.mit.edu	37	5	167937679	167937679	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	RARS	NM_002887	exon12	c.A1440G	p.K480K	.	.	249	6	226	1	.	93
RBM19	9904	bcgsc.ca	37	12	114384268	114384268	+	Missense_Mutation	SNP	G	G	A	rs150497537	byfrequency	TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	RBM19	NM_001146699	exon12	c.C1420T	p.H474Y	.	.	65	4	134	0	G|0.999;A|0.001	95
RCBTB1	55213	bcgsc.ca	37	13	50118885	50118885	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	RCBTB1	NM_018191	exon10	c.T1160C	p.V387A	.	.	82	4	100	0	.	91
RCSD1	92241	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	167663459	167663459	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	RCSD1	NM_052862	exon5	c.T394A	p.S132T	.	.	161	47	102	0	.	517
RFX5	5993	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	1	151314816	151314816	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	RFX5	NM_000449	exon11	c.G1697T	p.S566I	.	.	489	33	465	0	.	91
RGMB	285704	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	98115463	98115463	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_001012761	exon4	c.C439G	p.H147D	.	.	86	50	94	0	.	.
RGMB	285704	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	5	98129453	98129453	+	Nonsense_Mutation	SNP	T	T	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_001012761	exon5	c.T1433A	p.L478X	.	.	247	135	204	0	.	.
RGS9	8787	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	63198195	63198195	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	RGS9	NM_003835	exon14	c.A1061T	p.Y354F	.	.	85	23	97	0	.	94
RNASET2	8635	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	6	167366035	167366035	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	RNASET2	NM_003730	exon2	c.G88A	p.D30N	.	.	231	27	265	0	.	90
RNF123	63891	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	49738946	49738946	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	RNF123	NM_022064	exon16	c.G1300T	p.V434F	.	.	101	53	126	0	.	584
RNF139	11236	bcgsc.ca	37	8	125499543	125499543	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	RNF139	NM_007218	exon2	c.T1653C	p.Y551Y	.	.	89	4	76	0	.	226
RNF8	9025	bcgsc.ca	37	6	37336766	37336766	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	RNF8	NM_003958	exon3	c.T747C	p.F249F	.	.	109	6	129	0	.	227
RNFT2	84900	bcgsc.ca	37	12	117204638	117204638	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_001109903	exon6	c.T647C	p.V216A	.	.	131	5	264	0	.	.
RPGRIP1	57096	bcgsc.ca	37	14	21816378	21816378	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	RPGRIP1	NM_020366	exon23	c.A3665G	p.E1222G	.	.	168	6	217	0	.	140
RRBP1	6238	bcgsc.ca	37	20	17623651	17623651	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	RRBP1	NM_004587	exon4	c.T735C	p.A245A	.	.	92	5	121	0	.	92
RYR3	6263	bcgsc.ca	37	15	34152829	34152829	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	RYR3	NM_001036	exon101	c.A14333G	p.D4778G	.	.	122	7	151	0	.	520
S100A9	6280	broad.mit.edu;bcgsc.ca	37	1	153330848	153330848	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	S100A9	NM_002965	exon2	c.A89G	p.D30G	.	.	375	10	298	0	.	90
SAMSN1	64092	bcgsc.ca	37	21	15882678	15882678	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SAMSN1	NM_001256370	exon6	c.A718G	p.T240A	.	.	160	5	231	1	.	94
SAV1	60485	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	51107527	51107527	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SAV1	NM_021818	exon4	c.T891A	p.N297K	.	.	258	84	333	0	.	658
SCN3B	55800	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	123516374	123516374	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SCN3B	NM_018400	exon2	c.C140T	p.S47F	.	.	105	42	122	0	.	156
SCRN2	90507	bcgsc.ca	37	17	45916938	45916938	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SCRN2	NM_138355	exon4	c.G428A	p.G143E	.	.	85	4	110	0	.	91
SCRN3	79634	bcgsc.ca	37	2	175264747	175264747	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SCRN3	NM_024583	exon3	c.A257G	p.H86R	.	.	172	5	212	2	.	91
SCYL2	55681	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	100728028	100728028	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SCYL2	NM_017988	exon14	c.A1846G	p.M616V	.	.	36	20	55	0	.	336
SELO	0	bcgsc.ca	37	22	50655118	50655118	+	Splice_Site	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_031454	exon7	c.1503-2A>G	.	.	.	46	6	33	0	.	.
SEPT2	4735	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	242289532	242289532	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SEPT2	NM_001008491	exon13	c.G1029A	p.M343I	.	.	288	60	386	1	.	68
SERPINB8	5271	bcgsc.ca	37	18	61645687	61645687	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SERPINB8	NM_001031848	exon2	c.A145G	p.S49G	.	.	97	4	123	0	.	226
SF3A1	10291	bcgsc.ca	37	22	30736203	30736203	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SF3A1	NM_005877	exon9	c.G1357T	p.D453Y	.	.	59	4	54	0	.	157
SIK2	23235	bcgsc.ca	37	11	111591753	111591753	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SIK2	NM_015191	exon12	c.T1911C	p.P637P	.	.	91	5	126	5	.	783
SIK3	23387	bcgsc.ca	37	11	116717141	116717141	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SIK3	NM_025164	exon23	c.T3763C	p.S1255P	.	.	128	5	155	0	.	919
SKIDA1	387640	hgsc.bcm.edu	37	10	21805486	21805486	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_207371	exon4	c.G1266A	p.E422E	.	.	43	7	67	0	.	.
SLC16A12	387700	bcgsc.ca	37	10	91196073	91196073	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SLC16A12	NM_213606	exon7	c.T1032C	p.C344C	.	.	59	4	108	1	.	69
SLC22A12	116085	bcgsc.ca	37	11	64359019	64359019	+	Splice_Site	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SLC22A12	.	.	.	.	.	.	41	4	49	0	.	91
SLC22A12	116085	bcgsc.ca	37	11	64361204	64361204	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SLC22A12	NM_144585	exon4	c.C759T	p.Y253Y	.	.	63	4	76	0	.	91
SLC25A21	89874	bcgsc.ca	37	14	37153994	37153994	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SLC25A21	NM_030631	exon8	c.A740G	p.Y247C	.	.	232	6	269	0	.	91
SLC26A8	116369	bcgsc.ca	37	6	35943257	35943257	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SLC26A8	NM_052961	exon10	c.A1182G	p.I394M	.	.	75	4	106	0	.	92
SLC27A5	10998	bcgsc.ca	37	19	59010959	59010959	+	Missense_Mutation	SNP	C	C	T	rs138279870		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SLC27A5	NM_012254	exon7	c.G1567A	p.V523M	.	.	75	4	82	0	C|1.000;T|0.000	90
SLC29A3	55315	bcgsc.ca	37	10	73115924	73115924	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SLC29A3	NM_018344	exon5	c.T697C	p.F233L	.	.	128	7	167	0	.	90
SLC6A20	54716	broad.mit.edu;bcgsc.ca	37	3	45807036	45807036	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SLC6A20	NM_020208	exon8	c.C1296T	p.A432A	.	.	88	12	131	0	.	92
SLC9A6	10479	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	135080330	135080330	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SLC9A6	NM_001042537	exon3	c.T589A	p.Y197N	.	.	436	164	576	0	.	131
SLCO1A2	6579	bcgsc.ca	37	12	21448587	21448587	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SLCO1A2	NM_134431	exon11	c.T1215C	p.S405S	.	.	187	6	264	0	.	157
SMYD3	64754	bcgsc.ca	37	1	246091324	246091324	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SMYD3	NM_001167740	exon7	c.T611C	p.L204P	.	.	48	4	47	0	.	226
SNRNP200	23020	bcgsc.ca	37	2	96956530	96956530	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SNRNP200	NM_014014	exon19	c.A2445G	p.L815L	.	.	166	5	190	0	.	162
SORL1	6653	bcgsc.ca	37	11	121428080	121428080	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SORL1	NM_003105	exon19	c.C2629T	p.R877C	.	.	94	4	175	0	.	228
SP140	11262	bcgsc.ca	37	2	231177381	231177381	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SP140	NM_007237	exon27	c.A2586G	p.E862E	.	.	217	6	241	0	.	90
SPAG9	9043	bcgsc.ca	37	17	49091679	49091679	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SPAG9	NM_001130528	exon9	c.A1127G	p.D376G	.	.	260	8	338	0	.	659
SPATA8	145946	bcgsc.ca	37	15	97328236	97328236	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	SPATA8,NS,carcinoma,+2	SPATA8	NM_173499	exon3	c.T207C	p.C69C	.	.	99	5	138	0	.	92
SPDYE3	441272	broad.mit.edu	37	7	99913460	99913460	+	Silent	SNP	A	A	G	rs201349757		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SPDYE3	NM_001004351	exon7	c.A1254G	p.S418S	.	.	5	3	16	0	A|0.998;G|0.002	22
SPECC1	92521	bcgsc.ca	37	17	20108903	20108903	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SPECC1	NM_001033553	exon4	c.A1541G	p.E514G	.	.	89	4	98	0	.	639
SPRR3	6707	mdanderson.org	37	1	152975715	152975715	+	Silent	SNP	C	C	T	rs63405761	byfrequency	TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SPRR3	NM_001097589	exon2	c.C219T	p.G73G	.	.	96	47	87	1	A|0.000;C|0.697;T|0.303	45
SPRR3	6707	mdanderson.org	37	1	152975739	152975739	+	Silent	SNP	T	T	A	rs17851565	byfrequency	TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SPRR3	NM_001097589	exon2	c.T243A	p.G81G	.	.	94	25	105	2	A|0.010;C|0.001;T|0.988	45
SPTAN1	6709	bcgsc.ca	37	9	131337015	131337015	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SPTAN1	NM_003127	exon4	c.G425T	p.G142V	.	.	65	4	101	0	.	158
SPTB	6710	bcgsc.ca	37	14	65263354	65263354	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SPTB	NM_001024858	exon10	c.A1262G	p.E421G	.	.	74	4	82	0	.	100
SRGAP1	57522	bcgsc.ca	37	12	64536109	64536109	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SRGAP1	NM_020762	exon22	c.A2915G	p.E972G	.	.	56	4	91	0	.	653
SRRM5	100170229	ucsc.edu;bcgsc.ca	37	19	44116676	44116676	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_001145641	exon1	c.T403C	p.S135P	.	.	38	5	42	0	.	.
STAG1	10274	bcgsc.ca	37	3	136057100	136057100	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	STAG1	NM_005862	exon34	c.T3773C	p.F1258S	.	.	166	6	173	0	.	228
STAG1	10274	broad.mit.edu	37	3	136240089	136240089	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	STAG1	NM_005862	exon7	c.G642A	p.Q214Q	.	.	185	4	258	0	.	228
STAT2	6773	bcgsc.ca	37	12	56750303	56750303	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	STAT2	NM_198332	exon2	c.T53C	p.L18P	.	.	87	4	94	1	.	847
STK17A	9263	bcgsc.ca	37	7	43664352	43664352	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	STK17A	NM_004760	exon7	c.A1156G	p.K386E	.	.	108	5	117	0	.	335
STOX2	56977	bcgsc.ca	37	4	184931466	184931466	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	STOX2	NM_020225	exon3	c.G1475T	p.R492M	.	.	63	4	99	0	.	22
SUGP2	10147	bcgsc.ca	37	19	19136307	19136307	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SUGP2	NM_014884	exon3	c.A850G	p.T284A	.	.	112	6	170	0	.	91
SYNE2	23224	bcgsc.ca	37	14	64469490	64469490	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SYNE2	NM_182914	exon30	c.A3839G	p.E1280G	.	.	134	5	191	0	.	164
SYNJ1	8867	bcgsc.ca	37	21	34053826	34053826	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	SYNJ1	NM_203446	exon11	c.G1450A	p.A484T	.	.	142	5	176	0	.	232
TAF2	6873	bcgsc.ca	37	8	120809244	120809244	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TAF2	NM_003184	exon8	c.A1077G	p.I359M	.	.	74	4	77	0	.	274
TANC2	26115	bcgsc.ca	37	17	61315327	61315327	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TANC2	NM_025185	exon6	c.G700A	p.A234T	.	.	118	5	179	0	.	24
TANGO2	128989	bcgsc.ca	37	22	20052139	20052139	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_152906	exon9	c.T785C	p.L262P	.	.	108	5	85	0	.	.
TARDBP	23435	bcgsc.ca	37	1	11077051	11077051	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TARDBP	NM_007375	exon3	c.T389C	p.V130A	.	.	99	7	124	0	.	92
TAS1R3	83756	bcgsc.ca	37	1	1267911	1267911	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TAS1R3	NM_152228	exon3	c.T1000C	p.F334L	.	.	84	4	89	0	.	22
TBX20	57057	bcgsc.ca	37	7	35288369	35288369	+	Silent	SNP	C	C	T	rs183435583		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TBX20	NM_001077653	exon3	c.G465A	p.V155V	.	.	113	5	138	0	C|0.999;T|0.000	90
TBX4	9496	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	59560737	59560737	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TBX4	NM_018488	exon8	c.G1498A	p.G500R	.	.	82	29	120	0	.	227
TESK1	7016	bcgsc.ca	37	9	35608432	35608432	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TESK1	NM_006285	exon9	c.A926G	p.Q309R	.	.	54	4	44	0	.	641
TEX14	56155	bcgsc.ca	37	17	56699092	56699092	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TEX14	NM_198393	exon5	c.T473C	p.F158S	.	.	77	4	87	0	.	810
TFPI2	7980	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	93516721	93516721	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TFPI2	NM_006528	exon4	c.A483G	p.P161P	.	.	118	70	102	0	.	515
TGFB3	7043	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	14	76437499	76437499	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TGFB3	NM_003239	exon3	c.G616C	p.D206H	.	.	42	10	62	0	.	524
TGS1	96764	bcgsc.ca	37	8	56711494	56711494	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TGS1	NM_024831	exon8	c.G1564A	p.V522I	.	.	55	4	80	0	.	227
TINAG	27283	ucsc.edu;bcgsc.ca	37	6	54254594	54254594	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TINAG	NM_014464	exon11	c.T1302C	p.A434A	.	.	46	4	51	0	.	93
TLE4	7091	bcgsc.ca	37	9	82321664	82321664	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TLE4	NM_007005	exon11	c.T786C	p.D262D	.	.	89	4	129	0	.	524
TLR1	7096	broad.mit.edu	37	4	38798514	38798514	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TLR1	NM_003263	exon4	c.G1939A	p.D647N	.	.	176	6	200	0	.	524
TMED6	146456	bcgsc.ca	37	16	69383445	69383445	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TMED6	NM_144676	exon2	c.T323C	p.F108S	.	.	78	4	79	0	.	91
TMEM108	66000	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	3	133099005	133099005	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TMEM108	NM_023943	exon4	c.C450T	p.T150T	.	.	52	24	41	0	.	94
TMEM165	55858	bcgsc.ca	37	4	56277892	56277892	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TMEM165	NM_018475	exon2	c.T319C	p.S107P	.	.	200	6	249	1	.	514
TMEM30A	55754	bcgsc.ca	37	6	75969126	75969126	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TMEM30A	NM_018247	exon5	c.A622G	p.T208A	.	.	336	8	434	1	.	90
TNIK	23043	bcgsc.ca	37	3	170789047	170789047	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TNIK	NM_015028	exon29	c.G3514A	p.A1172T	.	.	62	5	69	0	.	550
TOMM34	10953	bcgsc.ca	37	20	43577493	43577493	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TOMM34	NM_006809	exon5	c.A576G	p.K192K	.	.	234	6	300	0	.	90
TOP3A	7156	bcgsc.ca	37	17	18181007	18181007	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TOP3A	NM_004618	exon18	c.G2809T	p.D937Y	.	.	59	4	82	0	.	228
TP53BP1	7158	bcgsc.ca	37	15	43701126	43701126	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TP53BP1	NM_001141980	exon26	c.T5569C	p.Y1857H	.	.	77	4	105	0	.	294
TPH1	7166	bcgsc.ca	37	11	18045501	18045501	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TPH1	NM_004179	exon8	c.A960G	p.L320L	.	.	90	4	102	0	.	90
TPP1	1200	bcgsc.ca	37	11	6638075	6638075	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TPP1	NM_000391	exon7	c.T703C	p.F235L	.	.	71	4	94	0	.	90
TPP2	7174	bcgsc.ca	37	13	103317205	103317205	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TPP2	NM_003291	exon26	c.G3262T	p.D1088Y	.	.	82	4	136	0	.	92
TPPP2	122664	bcgsc.ca	37	14	21500100	21500100	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TPPP2	NM_173846	exon4	c.A377G	p.Y126C	.	.	110	5	161	0	.	90
TPX2	22974	bcgsc.ca	37	20	30366748	30366748	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TPX2	NM_012112	exon10	c.C1015T	p.P339S	.	.	66	4	86	0	.	290
TRAF7	84231	mdanderson.org	37	16	2226345	2226345	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TRAF7	NM_032271	exon20	c.G1958A	p.R653Q	.	.	61	9	75	2	.	661
TRERF1	55809	broad.mit.edu;bcgsc.ca	37	6	42196208	42196208	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TRERF1	NM_033502	exon18	c.G3478A	p.D1160N	.	.	85	6	108	0	.	230
TRIM25	7706	bcgsc.ca	37	17	54969541	54969541	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TRIM25	NM_005082	exon9	c.T1413C	p.A471A	.	.	63	4	68	0	.	289
TRIM69	140691	bcgsc.ca	37	15	45051048	45051048	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TRIM69	NM_182985	exon4	c.T809C	p.L270P	.	.	79	4	106	0	.	90
TRIM6-TRIM34	445372	broad.mit.edu	37	11	5624607	5624607	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TRIM6-TRIM34	NM_001003819	exon2	c.T149C	p.L50P	.	.	143	6	178	2	.	45
TRIML2	205860	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	189026083	189026083	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	TRIML2,brain,glioma,0	TRIML2	NM_173553	exon2	c.T43C	p.L15L	.	.	164	45	216	1	.	90
TSFM	10102	bcgsc.ca	37	12	58190320	58190320	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TSFM	NM_001172696	exon7	c.T995C	p.V332A	.	.	173	6	167	1	.	492
TSPAN18	90139	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	44931287	44931287	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TSPAN18	NM_130783	exon4	c.T95C	p.I32T	.	.	60	27	70	1	.	68
TST	7263	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	37414432	37414432	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TST	NM_003312	exon2	c.G342T	p.W114C	.	.	96	22	96	0	.	90
TTC17	55761	bcgsc.ca	37	11	43400859	43400859	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TTC17	NM_018259	exon2	c.T236C	p.L79P	.	.	81	6	52	0	.	95
TTC24	164118	bcgsc.ca	37	1	156552135	156552135	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TTC24	NM_001105669	exon3	c.C819T	p.A273A	.	.	75	4	71	0	.	46
TTN	7273	bcgsc.ca	37	2	179498230	179498230	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TTN	NM_001267550	exon232	c.T42856C	p.L14286L	.	.	118	5	133	1	.	636
TTN	7273	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	179434262	179434262	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	TTN	NM_001267550	exon326	c.C76597A	p.P25533T	.	.	246	90	270	0	.	636
UBE2T	29089	bcgsc.ca	37	1	202302655	202302655	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	UBE2T	NM_014176	exon4	c.T208C	p.F70L	.	.	216	6	171	0	.	90
UBE3A	7337	bcgsc.ca	37	15	25605565	25605565	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	UBE3A	NM_000462	exon8	c.A1727G	p.Q576R	.	.	134	6	105	0	.	660
UBR2	23304	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	6	42619803	42619803	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	UBR2	NM_015255	exon24	c.G2608C	p.D870H	.	.	174	13	234	0	.	94
UBR3	130507	bcgsc.ca	37	2	170815024	170815024	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	UBR3	NM_172070	exon24	c.G3622A	p.A1208T	.	.	83	5	108	0	.	68
UBR4	23352	bcgsc.ca	37	1	19472333	19472333	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	UBR4	NM_020765	exon53	c.T7899C	p.H2633H	.	.	86	4	149	0	.	612
USP18	11274	bcgsc.ca	37	22	18640450	18640450	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	USP18	NM_017414	exon2	c.T20C	p.L7P	.	.	170	6	196	1	.	658
USP6NL	9712	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	11532861	11532861	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	USP6NL	NM_001080491	exon8	c.T564A	p.H188Q	.	.	152	64	203	0	.	628
UTP15	84135	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	72866457	72866457	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	UTP15	NM_032175	exon6	c.G594T	p.E198D	.	.	246	67	227	0	.	90
UTP3	57050	bcgsc.ca	37	4	71554524	71554524	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	UTP3	NM_020368	exon1	c.T130C	p.Y44H	.	.	155	5	175	1	.	226
UTP3	57050	bcgsc.ca	37	4	71555621	71555621	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	UTP3	NM_020368	exon1	c.A1227G	p.R409R	.	.	132	6	137	0	.	226
VKORC1L1	154807	bcgsc.ca	37	7	65338465	65338465	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	VKORC1L1	NM_173517	exon1	c.T107C	p.V36A	.	.	65	4	55	0	.	90
VPS13B	157680	bcgsc.ca	37	8	100866195	100866195	+	Silent	SNP	C	C	T	rs148265212	alternate_allele	TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	VPS13B	NM_017890	exon56	c.C10653T	p.N3551N	.	.	79	5	80	0	C|1.000;G|0.000	301
VPS13D	55187	bcgsc.ca	37	1	12336905	12336905	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	VPS13D	NM_015378	exon19	c.T3260C	p.V1087A	.	.	86	5	162	0	.	95
VWDE	221806	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	12414712	12414712	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	VWDE	NM_001135924	exon8	c.G1166T	p.R389I	.	.	232	110	255	0	.	68
WDR83OS	51398	ucsc.edu;bcgsc.ca	37	19	12779996	12779996	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_016145	exon2	c.G102A	p.P34P	.	.	41	4	81	0	.	.
WDR90	197335	ucsc.edu	37	16	709105	709105	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	WDR90	NM_145294	exon25	c.G3031C	p.A1011P	.	.	49	4	60	3	.	92
XRRA1	143570	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	74617459	74617459	+	Silent	SNP	G	G	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	XRRA1	NM_182969	exon10	c.C804A	p.I268I	.	.	251	116	355	0	.	68
ZBTB4	57659	ucsc.edu;bcgsc.ca	37	17	7369945	7369945	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ZBTB4	NM_001128833	exon3	c.T176C	p.L59P	.	.	46	5	62	0	.	93
ZDHHC3	51304	bcgsc.ca	37	3	44975442	44975442	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ZDHHC3	NM_016598	exon4	c.C466T	p.H156Y	.	.	87	4	143	0	.	90
ZDHHC4	55146	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	6624765	6624765	+	Silent	SNP	T	T	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ZDHHC4	NM_018106	exon7	c.T615G	p.A205A	.	.	349	175	255	1	.	154
ZFAND3	60685	bcgsc.ca	37	6	38029448	38029448	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ZFAND3	NM_021943	exon3	c.C192T	p.T64T	.	.	88	4	136	0	.	91
ZFP37	7539	bcgsc.ca	37	9	115812150	115812150	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ZFP37	NM_003408	exon2	c.A135G	p.E45E	.	.	249	7	348	0	.	92
ZFP62	643836	bcgsc.ca	37	5	180277412	180277412	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_001172638	exon2	c.A1083G	p.G361G	.	.	118	6	107	0	.	.
ZFYVE9	9372	bcgsc.ca	37	1	52810564	52810564	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ZFYVE9	NM_004799	exon18	c.A4064G	p.K1355R	.	.	146	5	154	0	.	230
ZIK1	284307	bcgsc.ca	37	19	58102206	58102206	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ZIK1	NM_001010879	exon4	c.A1027G	p.R343G	.	.	82	4	102	0	.	91
ZNF177	7730	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	9492041	9492041	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ZNF177	NM_001172651	exon6	c.G1034A	p.C345Y	.	.	71	30	125	0	.	91
ZNF195	7748	bcgsc.ca	37	11	3381617	3381617	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ZNF195	NM_001130520	exon6	c.T621C	p.C207C	.	.	66	5	69	0	.	90
ZNF236	7776	bcgsc.ca	37	18	74589979	74589979	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ZNF236	NM_007345	exon7	c.T849C	p.P283P	.	.	69	4	63	0	.	94
ZNF239	8187	hgsc.bcm.edu	37	10	44052346	44052346	+	Silent	SNP	G	G	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ZNF239	NM_001099284	exon3	c.C1182G	p.L394L	.	.	226	10	289	0	.	90
ZNF239	8187	hgsc.bcm.edu;bcgsc.ca	37	10	44052345	44052346	+	Frame_Shift_Del	DEL	TG	TG	-	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	TG	TG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ZNF239	NM_001099284	exon3	c.1182_1183del	p.394_395del	.	.	224	65	287	0	.	90
ZNF267	10308	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	16	31926035	31926035	+	Silent	SNP	T	T	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ZNF267	NM_003414	exon4	c.T465G	p.S155S	.	.	209	76	215	0	.	138
ZNF280B	140883	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	22842866	22842866	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ZNF280B	NM_080764	exon4	c.T858C	p.S286S	.	.	180	51	174	0	.	70
ZNF33A	7581	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	38343322	38343322	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ZNF33A	NM_006954	exon5	c.C270T	p.H90H	.	.	110	52	181	0	.	93
ZNF404	342908	bcgsc.ca	37	19	44376855	44376855	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	NM_001033719	exon2	c.T1502C	p.F501S	.	.	149	5	197	0	.	.
ZNF408	79797	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	46726465	46726465	+	Silent	SNP	G	G	T	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ZNF408	NM_024741	exon5	c.G1215T	p.G405G	.	.	91	12	140	0	.	90
ZNF430	80264	bcgsc.ca	37	19	21239989	21239989	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ZNF430	NM_025189	exon5	c.A875G	p.E292G	.	.	49	4	53	0	.	516
ZNF530	348327	bcgsc.ca	37	19	58117266	58117266	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ZNF530	NM_020880	exon3	c.A373G	p.R125G	.	.	92	4	125	0	.	90
ZNF534	147658	bcgsc.ca	37	19	52942491	52942491	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ZNF534	NM_001143939	exon4	c.T1817C	p.L606P	.	.	90	4	120	0	.	68
ZNF536	9745	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	30934910	30934910	+	Silent	SNP	G	G	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ZNF536	NM_014717	exon2	c.G441C	p.L147L	.	.	72	16	68	1	.	144
ZNF559	84527	bcgsc.ca	37	19	9453277	9453277	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ZNF559	NM_001202406	exon6	c.A1342G	p.K448E	.	.	67	4	125	0	.	91
ZNF572	137209	bcgsc.ca	37	8	125988778	125988778	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ZNF572	NM_152412	exon3	c.G268A	p.G90S	.	.	65	5	86	0	.	154
ZNF618	114991	bcgsc.ca	37	9	116794953	116794953	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ZNF618	NM_133374	exon11	c.A834G	p.E278E	.	.	124	5	169	0	.	22
ZNF750	79755	bcgsc.ca	37	17	80789290	80789290	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ZNF750	NM_024702	exon2	c.T1041C	p.S347S	.	.	77	4	115	1	.	90
ZNF76	7629	bcgsc.ca	37	6	35248987	35248987	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ZNF76	NM_003427	exon2	c.A59G	p.Q20R	.	.	75	4	132	0	.	90
ZNF772	400720	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	19	57987070	57987075	+	In_Frame_Del	DEL	GGTACA	GGTACA	-	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	GGTACA	GGTACA	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ZNF772	NM_001144068	exon3	c.152_157del	p.51_53del	.	.	188	34	328	0	.	90
ZNF812	729648	bcgsc.ca	37	19	9801220	9801220	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ZNF812	NM_001199814	exon6	c.T959C	p.L320P	.	.	238	6	297	0	.	1
ZNF831	128611	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	57829455	57829455	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ZNF831	NM_178457	exon5	c.A4691C	p.K1564T	.	.	128	45	159	0	.	126
ZNF83	55769	bcgsc.ca	37	19	53117180	53117180	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	ZNF83	NM_018300	exon3	c.T638C	p.V213A	.	.	130	5	183	2	.	91
C19orf21	126353	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	758698	758699	+	Missense_Mutation	DNP	GA	GA	TG	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	GA	GA	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	.	.	.	p.QN584HD	.	.	.	.	.	.	.	
NEK2P2	100379667	bcgsc.ca	37	22	16365507	16365508	+	RNA	DNP	CC	CC	AT	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	CC	CC	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	.	.	.	.	.	.	.	.	.	.	.	
PLXNB1	5364	bcgsc.ca	37	3	48465124	48465125	+	Missense_Mutation	DNP	CG	CG	AA	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	CG	CG	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	.	.	.	p.S299F	.	.	.	.	.	.	.	
ZNF292	23036	bcgsc.ca	37	6	87967352	87967353	+	Missense_Mutation	DNP	CC	CC	TA	novel		TCGA-DD-A11D-01A-11D-A12Z-10	TCGA-DD-A11D-11A-12D-A12Z-10	CC	CC	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	ef36ae28-ea74-4d7d-9fe3-df3b7ee12a58	6509e096-9af2-4933-9691-7463020c7f8d	.	.	.	.	.	p.Q1336K	.	.	.	.	.	.	.	
