Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	TranscriptID	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov_SOL	TVarCov_SOL	NTotCov_SOL	NVarCov_SOL	dbSNPPopFreq	COSMIC_Gene_Freq
A2ML1	144568	bcgsc.ca	37	12	9006793	9006793	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	A2ML1	NM_144670	exon21	c.T2660C	p.F887S	.	.	69	4	33	0	.	93
ABCA13	154664	bcgsc.ca	37	7	48311690	48311690	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ABCA13	NM_152701	exon17	c.T2427C	p.S809S	.	.	79	4	46	0	.	521
ABCG8	64241	bcgsc.ca	37	2	44101047	44101047	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ABCG8	NM_022437	exon9	c.T1333C	p.F445L	.	.	250	8	107	0	.	94
ACTN2	88	bcgsc.ca	37	1	236900479	236900479	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ACTN2	NM_001103	exon9	c.A841G	p.R281G	.	.	278	8	74	0	.	95
ACTR3C	653857	broad.mit.edu;ucsc.edu	37	7	149983565	149983565	+	Missense_Mutation	SNP	T	T	C	rs76400975		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_001164459	exon5	c.A362G	p.Q121R	.	.	180	46	59	0	T|0.500;C|0.500	.
ADAM21P1	145241	broad.mit.edu	37	14	70713742	70713742	+	RNA	SNP	G	G	T	rs78990308		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	.	.	.	.	.	.	292	19	99	0	G|1.000;|0.000	.
ADAM29	11086	bcgsc.ca	37	4	175896848	175896848	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ADAM29	NM_001130703	exon4	c.T172C	p.F58L	.	.	179	7	77	0	.	729
ADAM33	80332	bcgsc.ca	37	20	3649633	3649640	+	Frame_Shift_Del	DEL	TCTGGACT	TCTGGACT	-	rs146576636		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	TCTGGACT	TCTGGACT	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ADAM33	NM_025220	exon22	c.2412_2419del	p.804_807del	.	.	80	17	40	0	TCTGGACT|0.925;-|0.075	291
ADAMTSL1	92949	bcgsc.ca	37	9	18892393	18892393	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ADAMTSL1	NM_001040272	exon26	c.G4650T	p.M1550I	.	.	76	4	51	0	.	230
ADGB	79747	bcgsc.ca	37	6	146993517	146993517	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_024694	exon8	c.A1001G	p.K334R	.	.	149	6	90	1	.	.
ADNP	23394	bcgsc.ca	37	20	49510207	49510207	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ADNP	NM_015339	exon5	c.A1044G	p.R348R	.	.	79	4	47	0	.	92
AFF2	2334	hgsc.bcm.edu	37	X	148038047	148038048	+	Frame_Shift_Ins	INS	-	-	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	AFF2	NM_002025	exon11	c.2472_2473insA	p.A824fs	.	.	116	3	27	0	.	135
AGAP6	414189	bcgsc.ca	37	10	51767807	51767807	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	AGAP6	NM_001077665	exon7	c.A556G	p.I186V	.	.	125	5	72	0	.	1
AGFG1	3267	bcgsc.ca	37	2	228418433	228418433	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	AGFG1	NM_001135187	exon13	c.A1617G	p.A539A	.	.	154	5	98	0	.	228
AGR3	155465	bcgsc.ca	37	7	16900176	16900176	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	AGR3	NM_176813	exon7	c.T399C	p.A133A	.	.	137	6	71	0	.	90
AKAP11	11215	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	13	42877120	42877120	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	AKAP11	NM_016248	exon8	c.C4238A	p.S1413X	.	.	56	17	54	0	.	227
AKAP17A	8227	bcgsc.ca	37	X	1712519	1712519	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	AKAP17A	NM_005088	exon2	c.T164C	p.L55P	.	.	200	6	78	0	.	40
AKAP9	10142	bcgsc.ca	37	7	91726574	91726574	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	AKAP9	NM_005751	exon41	c.A10301G	p.Q3434R	.	.	155	6	65	0	.	755
ALG1L9P	285407	broad.mit.edu	37	11	71507232	71507232	+	RNA	SNP	C	C	G	rs7114001	bycluster	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	.	.	.	.	.	.	141	8	56	2	G|1.000;|0.000	.
ALG1L9P	285407	ucsc.edu	37	11	71507261	71507261	+	RNA	SNP	A	A	G	rs111708284		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	.	.	.	.	.	.	88	13	43	2	A|0.832;G|0.168	.
ALG8	79053	bcgsc.ca	37	11	77825406	77825406	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ALG8	NM_024079	exon6	c.T579C	p.A193A	.	.	108	5	57	0	.	93
AMOTL1	154810	bcgsc.ca	37	11	94532824	94532824	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	AMOTL1	NM_130847	exon3	c.A468G	p.A156A	.	.	69	4	39	0	.	91
AMY2A	279	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	104160673	104160673	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	AMY2A	NM_000699	exon2	c.G266C	p.G89A	.	.	1040	372	189	0	.	92
ANK2	287	bcgsc.ca	37	4	114276333	114276333	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ANK2	NM_001148	exon38	c.T6559C	p.F2187L	.	.	136	6	71	0	.	583
ANKK1	255239	bcgsc.ca	37	11	113266105	113266105	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ANKK1	NM_178510	exon4	c.A657G	p.L219L	.	.	161	6	73	1	.	628
ANKRD11	29123	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	16	89349770	89349770	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ANKRD11	NM_001256183	exon9	c.A3180G	p.K1060K	.	.	277	115	124	0	.	139
ANKRD13C	81573	bcgsc.ca	37	1	70766490	70766490	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ANKRD13C	NM_030816	exon7	c.T878C	p.V293A	.	.	81	4	51	0	.	90
ANKRD36B	57730	ucsc.edu	37	2	98167941	98167941	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_025190	exon17	c.T1276C	p.S426P	.	.	36	4	10	0	.	.
ANKRD36BP2	645784	broad.mit.edu	37	2	89102392	89102392	+	RNA	SNP	C	C	A	rs77689030		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	.	.	.	.	.	.	143	8	64	0	A|1.000;|0.000	.
ANO6	196527	bcgsc.ca	37	12	45744492	45744492	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ANO6	NM_001204803	exon8	c.C861T	p.Y287Y	.	.	121	5	60	0	.	516
APOB	338	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	2	21245890	21245891	+	Frame_Shift_Ins	INS	-	-	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	APOB	NM_000384	exon18	c.2629_2630insA	p.P877fs	.	.	137	48	79	0	.	175
APOB	338	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	21231053	21231053	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	APOB	NM_000384	exon26	c.C8687T	p.P2896L	.	.	232	100	110	0	.	175
AQP7	364	bcgsc.ca	37	9	33386146	33386146	+	Missense_Mutation	SNP	C	C	A	rs76608797	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	AQP7	NM_001170	exon6	c.G454T	p.V152F	.	.	220	23	81	0	C|0.785;A|0.215	90
AQR	9716	bcgsc.ca	37	15	35224582	35224582	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	AQR	NM_014691	exon11	c.T837C	p.L279L	.	.	106	5	54	0	.	135
AQR	9716	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	35198872	35198872	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	AQR	NM_014691	exon18	c.C1705A	p.P569T	.	.	100	39	58	0	.	135
ARHGAP12	94134	bcgsc.ca	37	10	32132465	32132465	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ARHGAP12	NM_001270696	exon7	c.T1220C	p.L407P	.	.	116	5	66	0	.	227
ARHGAP32	9743	bcgsc.ca	37	11	128993383	128993383	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ARHGAP32	NM_001142685	exon4	c.T360C	p.C120C	.	.	200	6	108	1	.	231
ARHGAP44	9912	bcgsc.ca	37	17	12812229	12812229	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ARHGAP44	NM_014859	exon4	c.A214G	p.T72A	.	.	55	4	48	0	.	90
ARHGAP5	394	bcgsc.ca	37	14	32563229	32563229	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ARHGAP5	NM_001173	exon2	c.T3354C	p.R1118R	.	.	95	4	59	0	.	94
ARHGEF12	23365	bcgsc.ca	37	11	120328830	120328830	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ARHGEF12	NM_015313	exon25	c.A2267G	p.E756G	.	.	175	6	89	0	.	661
ARMC10	83787	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	7	102738867	102738867	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ARMC10	NM_031905	exon7	c.A899G	p.Q300R	.	.	614	165	175	0	.	91
ARMC5	79798	hgsc.bcm.edu	37	16	31475858	31475858	+	Missense_Mutation	SNP	G	G	T	rs200852513		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ARMC5	NM_024742	exon4	c.G1514T	p.R505L	.	.	16	9	0	0	.	24
ARSD	414	ucsc.edu	37	X	2835985	2835985	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ARSD	NM_001669	exon5	c.C723T	p.F241F	.	.	142	35	38	3	.	130
ASB4	51666	bcgsc.ca	37	7	95157343	95157343	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ASB4	NM_016116	exon3	c.C706T	p.R236C	.	.	141	5	62	0	.	226
ATAD2	29028	bcgsc.ca	37	8	124371544	124371544	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ATAD2	NM_014109	exon11	c.T1299C	p.N433N	.	.	250	6	98	0	.	92
ATCAY	85300	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	3910853	3910853	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ATCAY	NM_033064	exon8	c.C832T	p.R278W	.	.	137	63	64	0	.	67
ATF7	11016	bcgsc.ca	37	12	53928309	53928309	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ATF7	NM_006856	exon6	c.T537C	p.A179A	.	.	262	8	88	1	.	455
ATP13A1	57130	bcgsc.ca	37	19	19767696	19767696	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ATP13A1	NM_020410	exon6	c.T936G	p.I312M	.	.	67	4	40	0	.	138
ATP13A3	79572	bcgsc.ca	37	3	194158083	194158083	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ATP13A3	NM_024524	exon18	c.A1956G	p.K652K	.	.	119	5	62	0	.	69
ATP13A3	79572	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	194126804	194126804	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ATP13A3	NM_024524	exon32	c.C3525T	p.A1175A	.	.	198	79	96	0	.	69
ATP1A1	476	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	116933025	116933025	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ATP1A1	NM_001160233	exon9	c.A1214C	p.N405T	.	.	191	66	88	0	.	91
ATP2B2	491	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	10443888	10443888	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ATP2B2	NM_001683	exon4	c.G542T	p.G181V	.	.	95	40	45	0	.	95
ATP2C1	27032	bcgsc.ca	37	3	130688159	130688159	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ATP2C1	NM_001199181	exon16	c.A1434G	p.Q478Q	.	.	336	8	130	0	.	91
ATP4A	495	bcgsc.ca	37	19	36042466	36042466	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ATP4A	NM_000704	exon19	c.T2768C	p.L923P	.	.	72	4	40	0	.	91
ATP5G3	518	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	176044872	176044872	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ATP5G3	NM_001190329	exon3	c.T74A	p.I25N	.	.	92	35	62	1	.	91
ATP5L	10632	bcgsc.ca	37	11	118277757	118277757	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ATP5L	NM_006476	exon2	c.T158C	p.L53P	.	.	56	4	46	0	.	90
ATP7A	538	bcgsc.ca	37	X	77294412	77294412	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ATP7A	NM_000052	exon18	c.A3590G	p.N1197S	.	.	131	5	43	0	.	130
AURKC	6795	bcgsc.ca	37	19	57742489	57742489	+	Splice_Site	SNP	C	C	T	rs58264281		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	AURKC	.	.	.	.	.	.	61	14	27	0	C|0.239;T|0.761	1560
BAG6	7917	bcgsc.ca	37	6	31609948	31609948	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	BAG6	NM_004639	exon15	c.T2186C	p.F729S	.	.	171	5	74	0	.	154
BAGE4	85317	bcgsc.ca	37	21	11098729	11098729	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_181704	exon1	c.C9T	p.A3A	.	.	182	15	47	0	.	.
BAI2	576	bcgsc.ca	37	1	32198611	32198611	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	BAI2	NM_001703	exon26	c.T3586C	p.F1196L	.	.	118	5	52	0	.	526
BCDIN3D	144233	ucsc.edu;bcgsc.ca	37	12	50232284	50232284	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	BCDIN3D	NM_181708	exon2	c.T749C	p.F250S	.	.	48	4	36	0	.	69
BCLAF1	9774	ucsc.edu	37	6	136582401	136582401	+	Splice_Site	SNP	A	A	T	rs62431282		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	BCLAF1	NM_014739	exon13	c.2757+2T>A	.	.	.	286	41	126	5	.	228
BSN	8927	bcgsc.ca	37	3	49680451	49680451	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	BSN	NM_003458	exon3	c.A1384G	p.R462G	.	.	83	5	36	1	.	97
C11orf30	56946	bcgsc.ca	37	11	76234309	76234309	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	C11orf30	NM_020193	exon12	c.G1795A	p.V599I	.	.	80	4	43	0	.	232
C11orf63	79864	bcgsc.ca	37	11	122805498	122805498	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	C11orf63	NM_024806	exon5	c.A1349G	p.D450G	.	.	70	4	51	0	.	93
C16orf70	80262	bcgsc.ca	37	16	67179294	67179294	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	C16orf70	NM_025187	exon13	c.A1022G	p.Q341R	.	.	61	4	44	0	.	70
C1RL	51279	bcgsc.ca	37	12	7260932	7260932	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	C1RL	NM_016546	exon2	c.A215G	p.K72R	.	.	188	6	99	0	.	91
C20orf111	51526	bcgsc.ca	37	20	42826237	42826237	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	C20orf111	NM_016470	exon4	c.A334G	p.T112A	.	.	151	5	67	0	.	90
C2CD3	26005	bcgsc.ca	37	11	73850811	73850811	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	C2CD3	NM_015531	exon4	c.T546C	p.T182T	.	.	379	8	141	1	.	75
C4orf40	401137	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	4	71024317	71024318	+	Frame_Shift_Ins	INS	-	-	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	C4orf40	NM_214711	exon3	c.348_349insT	p.R116fs	.	.	108	28	46	0	.	68
C5	727	bcgsc.ca	37	9	123752015	123752015	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	C5	NM_001735	exon24	c.A2985G	p.E995E	.	.	108	5	53	0	.	92
C5AR1	728	bcgsc.ca	37	19	47823896	47823896	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	C5AR1	.	.	.	.	.	.	132	6	78	0	.	93
C5orf42	65250	bcgsc.ca	37	5	37183705	37183705	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	C5orf42	NM_023073	exon26	c.T4578C	p.D1526D	.	.	133	6	62	0	.	94
C8orf34	116328	broad.mit.edu	37	8	69699727	69699727	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	C8orf34	NM_052958	exon12	c.C1505T	p.P502L	.	.	277	9	109	0	.	153
C9orf135	138255	bcgsc.ca	37	9	72472855	72472855	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	C9orf135	NM_001010940	exon4	c.A411G	p.G137G	.	.	75	4	45	0	.	69
CAB39	51719	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	231624746	231624746	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CAB39	NM_001130849	exon2	c.A30G	p.K10K	.	.	267	114	100	0	.	226
CACNA1B	774	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	140880982	140880982	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CACNA1B	NM_001243812	exon14	c.G1887T	p.Q629H	.	.	298	110	109	0	.	138
CACNB4	785	bcgsc.ca	37	2	152830188	152830188	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CACNB4	NM_001005747	exon1	c.G40A	p.E14K	.	.	84	4	43	0	.	24
CCDC117	150275	bcgsc.ca	37	22	29179571	29179571	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CCDC117	NM_173510	exon4	c.C540A	p.T180T	.	.	93	4	78	0	.	91
CCDC146	57639	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	76909777	76909777	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CCDC146	NM_020879	exon14	c.A1726G	p.N576D	.	.	126	50	92	0	.	70
CCDC67	159989	bcgsc.ca	37	11	93148214	93148214	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CCDC67	NM_181645	exon13	c.A1572G	p.P524P	.	.	342	8	141	0	.	91
CD40	958	bcgsc.ca	37	20	44757588	44757588	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CD40	NM_001250	exon9	c.C743T	p.A248V	.	.	67	4	33	0	.	659
CDC27	996	bcgsc.ca	37	17	45234625	45234625	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CDC27	NM_001114091	exon6	c.G601T	p.V201F	.	.	300	32	100	0	.	291
CDCA7	83879	bcgsc.ca	37	2	174231133	174231133	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CDCA7	NM_031942	exon8	c.A1158G	p.E386E	.	.	142	6	66	0	.	91
CDH1	999	bcgsc.ca	37	16	68857323	68857323	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CDH1	NM_004360	exon13	c.A1958G	p.K653R	.	.	64	4	42	0	.	3377
CDH3	1001	bcgsc.ca	37	16	68729170	68729170	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CDH3	NM_001793	exon14	c.T2015C	p.V672A	.	.	136	6	69	1	.	950
CEP164	22897	bcgsc.ca	37	11	117261779	117261779	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CEP164	NM_001271933	exon16	c.A2140G	p.R714G	.	.	203	7	93	0	.	69
CEP350	9857	bcgsc.ca	37	1	180062964	180062964	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CEP350	NM_014810	exon34	c.A7724G	p.D2575G	.	.	158	5	56	0	.	26
CES4A	283848	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	67038121	67038121	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CES4A	NM_173815	exon9	c.G1074T	p.L358F	.	.	210	76	79	0	.	91
CFL1	1072	bcgsc.ca	37	11	65623133	65623133	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CFL1	NM_005507	exon3	c.A380G	p.K127R	.	.	114	5	67	0	.	90
CHD6	84181	bcgsc.ca	37	20	40120438	40120438	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CHD6	NM_032221	exon11	c.T1336C	p.W446R	.	.	78	4	44	0	.	238
CHD7	55636	bcgsc.ca	37	8	61655558	61655558	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CHD7	NM_017780	exon2	c.T1567C	p.L523L	.	.	132	5	63	0	.	141
CHD9	80205	bcgsc.ca	37	16	53190975	53190975	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CHD9	NM_025134	exon2	c.T974C	p.I325T	.	.	87	4	56	0	.	272
CHRM3	1131	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	240071370	240071370	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CHRM3	NM_000740	exon5	c.T619A	p.W207R	.	.	571	353	124	0	.	95
CHRNB1	1140	bcgsc.ca	37	17	7359995	7359995	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CHRNB1	NM_000747	exon11	c.T1459C	p.F487L	.	.	103	5	76	0	.	92
CHRNB3	1142	bcgsc.ca	37	8	42565539	42565539	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CHRNB3	NM_000749	exon3	c.A211G	p.K71E	.	.	80	4	50	0	.	91
CLK4	57396	bcgsc.ca	37	5	178030723	178030723	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CLK4	NM_020666	exon13	c.A1341G	p.K447K	.	.	210	6	88	0	.	359
CLSTN1	22883	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	9795606	9795606	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CLSTN1	NM_001009566	exon13	c.C1802A	p.A601D	.	.	215	92	98	0	.	523
CLTCL1	8218	bcgsc.ca	37	22	19220946	19220946	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CLTCL1	NM_001835	exon8	c.A1367G	p.K456R	.	.	75	4	48	0	.	230
CMYA5	202333	bcgsc.ca	37	5	79032116	79032116	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CMYA5	NM_153610	exon2	c.G7528T	p.A2510S	.	.	91	4	40	0	.	77
CNKSR2	22866	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	21545015	21545015	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CNKSR2	NM_001168647	exon10	c.G988A	p.V330I	.	.	177	163	60	0	.	625
CNOT11	55571	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	101885756	101885756	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_017546	exon7	c.A1414T	p.I472L	.	.	188	74	94	0	.	.
CNTNAP4	85445	bcgsc.ca	37	16	76523709	76523709	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CNTNAP4	NM_138994	exon12	c.T1790C	p.I597T	.	.	150	5	67	0	.	70
COG3	83548	bcgsc.ca	37	13	46077398	46077400	+	In_Frame_Del	DEL	AAG	AAG	-	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	AAG	AAG	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	COG3	NM_031431	exon14	c.1508_1510del	p.503_504del	.	.	106	13	74	0	.	154
COG3	83548	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	13	46077408	46077408	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	COG3	NM_031431	exon14	c.1518delG	p.Q506fs	.	.	118	16	80	0	.	154
COL12A1	1303	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	75884785	75884785	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	COL12A1	NM_004370	exon13	c.C2679A	p.D893E	.	.	170	68	75	0	.	142
COL15A1	1306	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	9	101749575	101749575	+	Splice_Site	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	COL15A1	NM_001855	exon4	c.649-1G>A	.	.	.	65	27	25	0	.	96
COL22A1	169044	bcgsc.ca	37	8	139890073	139890073	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	COL22A1	NM_152888	exon3	c.A578G	p.K193R	.	.	109	10	61	0	.	103
COL4A5	1287	bcgsc.ca	37	X	107850076	107850076	+	Silent	SNP	G	G	T	rs3747408	byfrequency;alternate_allele	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	COL4A5	NM_000495	exon29	c.G2349T	p.P783P	.	.	191	7	53	0	G|0.866;A|0.134	133
COL6A5	256076	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	130113755	130113755	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_153264	exon8	c.C3015T	p.D1005D	.	.	124	47	73	0	.	.
COPS2	9318	bcgsc.ca	37	15	49447753	49447753	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	COPS2	NM_004236	exon1	c.T23C	p.F8S	.	.	79	4	53	0	.	227
CORO2B	10391	bcgsc.ca	37	15	69011820	69011820	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CORO2B	NM_006091	exon11	c.A1240G	p.K414E	.	.	113	5	60	0	.	158
CPA6	57094	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	68419048	68419048	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CPA6	NM_020361	exon6	c.G610A	p.A204T	.	.	158	60	80	1	.	92
CPE	1363	bcgsc.ca	37	4	166389003	166389003	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CPE	NM_001873	exon3	c.C668T	p.T223I	.	.	97	5	56	0	.	155
CPSF3	51692	bcgsc.ca	37	2	9580748	9580748	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CPSF3	NM_016207	exon8	c.A889G	p.I297V	.	.	144	5	77	0	.	153
CREB3L1	90993	bcgsc.ca	37	11	46331600	46331600	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CREB3L1	NM_052854	exon4	c.T577C	p.F193L	.	.	80	4	50	0	.	92
CREBBP	1387	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	3778620	3778620	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CREBBP	NM_004380	exon31	c.A6428G	p.N2143S	.	.	63	18	23	0	.	1807
CRSP8P	0	ucsc.edu;bcgsc.ca	37	5	79647167	79647167	+	RNA	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	.	.	.	.	.	.	215	67	78	0	.	.
CSDE1	7812	bcgsc.ca	37	1	115282495	115282495	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CSDE1	NM_001130523	exon4	c.A155G	p.N52S	.	.	64	4	42	0	.	227
CSF2RB	1439	bcgsc.ca	37	22	37334391	37334391	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CSF2RB	NM_000395	exon14	c.G2541A	p.E847E	.	.	55	4	34	0	.	93
CSGALNACT1	55790	bcgsc.ca	37	8	19277857	19277857	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CSGALNACT1	NM_018371	exon7	c.C1126A	p.Q376K	.	.	64	5	40	0	.	70
CSMD3	114788	bcgsc.ca	37	8	113323261	113323261	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CSMD3	NM_198123	exon50	c.A7831G	p.R2611G	.	.	138	7	79	1	.	1132
CSRP2BP	57325	bcgsc.ca	37	20	18143168	18143168	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CSRP2BP	NM_020536	exon6	c.A1250G	p.E417G	.	.	103	5	72	0	.	525
CT49	404663	bcgsc.ca	37	5	12794486	12794486	+	RNA	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	.	.	.	.	.	.	119	6	33	0	.	.
CTNNAL1	8727	bcgsc.ca	37	9	111746702	111746702	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CTNNAL1	NM_003798	exon5	c.A654G	p.E218E	.	.	64	5	63	0	.	228
CTNNB1	1499	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	3	41266093	41266107	+	In_Frame_Del	DEL	CCTGGACTCTGGAAT	CCTGGACTCTGGAAT	-	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	CCTGGACTCTGGAAT	CCTGGACTCTGGAAT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	CTNNB1,NS,carcinoma,+1	CTNNB1	NM_001098209	exon3	c.90_104del	p.30_35del	.	.	191	23	107	0	.	24361
CUL7	9820	bcgsc.ca	37	6	43020162	43020162	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CUL7	NM_001168370	exon2	c.T521C	p.L174P	.	.	60	4	36	0	.	229
CYBRD1	79901	bcgsc.ca	37	2	172411154	172411154	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CYBRD1	NM_001127383	exon3	c.T469C	p.S157P	.	.	357	9	131	1	.	90
CYP11B1	1584	bcgsc.ca	37	8	143955809	143955809	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CYP11B1	NM_000497	exon9	c.A1492G	p.T498A	.	.	197	7	101	0	.	94
CYP11B1	1584	ucsc.edu	37	8	143956693	143956693	+	Missense_Mutation	SNP	G	G	A	rs76151760	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CYP11B1	NM_000497	exon7	c.C1157T	p.A386V	.	.	64	19	34	13	G|0.500;A|0.500	94
CYP11B2	1585	ucsc.edu	37	8	143994279	143994279	+	Silent	SNP	A	A	G	rs61757295	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CYP11B2	NM_000498	exon7	c.T1144C	p.L382L	.	.	109	19	59	12	A|0.992;G|0.008	90
CYP17A1	1586	bcgsc.ca	37	10	104595039	104595039	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CYP17A1	NM_000102	exon2	c.G408A	p.K136K	.	.	56	4	30	0	.	90
CYP2B6	1555	ucsc.edu	37	19	41515263	41515263	+	Missense_Mutation	SNP	A	A	G	rs28399497	bycluster;byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CYP2B6	NM_000767	exon5	c.A785G	p.K262R	.	.	250	84	93	25	A|0.731;G|0.269	92
CYP4B1	1580	bcgsc.ca	37	1	47283804	47283804	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CYP4B1	NM_001099772	exon11	c.T1274C	p.V425A	.	.	156	5	85	0	.	92
CYP4F22	126410	ucsc.edu	37	19	15648434	15648434	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	CYP4F22	NM_173483	exon6	c.T510C	p.P170P	.	.	39	4	20	0	.	92
CYTB	0	broad.mit.edu;bcgsc.ca	37	MT	14813	14813	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	ENST00000361789	exon1	c.A67G	p.T23A	.	.	296	26	91	0	.	.
DAAM1	23002	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	59820665	59820665	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	DAAM1	NM_014992	exon19	c.T2369A	p.V790E	.	.	112	46	69	0	.	227
DARS	1615	bcgsc.ca	37	2	136681982	136681982	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	DARS	NM_001349	exon8	c.A651G	p.E217E	.	.	151	6	76	0	.	91
DAZL	1618	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	16639045	16639045	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	DAZL	NM_001190811	exon4	c.T306C	p.Y102Y	.	.	198	68	112	0	.	90
DDHD2	23259	bcgsc.ca	37	8	38090615	38090615	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	DDHD2	NM_001164232	exon2	c.A103G	p.S35G	.	.	162	7	98	0	.	91
DDX59	83479	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	200635118	200635118	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	DDX59	NM_001031725	exon2	c.T751A	p.S251T	.	.	442	102	114	0	.	155
DENND2A	27147	bcgsc.ca	37	7	140257963	140257963	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	DENND2A	NM_015689	exon9	c.G1939A	p.G647S	.	.	81	4	51	0	.	138
DGAT2	84649	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	75508294	75508294	+	Silent	SNP	T	T	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	DGAT2	NM_032564	exon6	c.T726G	p.A242A	.	.	101	36	40	0	.	226
DGKH	160851	bcgsc.ca	37	13	42773985	42773985	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	DGKH	NM_001204504	exon21	c.T2433C	p.L811L	.	.	61	4	33	0	.	652
DGKZ	8525	ucsc.edu;bcgsc.ca	37	11	46397126	46397126	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	DGKZ	NM_001105540	exon21	c.C2419A	p.Q807K	.	.	44	4	28	0	.	676
DHRS4	10901	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	14	24435604	24435604	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	DHRS4	NM_021004	exon6	c.T644G	p.I215S	.	.	1264	258	182	0	.	91
DHTKD1	55526	bcgsc.ca	37	10	12160833	12160833	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	DHTKD1	NM_018706	exon15	c.T2488C	p.F830L	.	.	86	5	54	0	.	515
DIP2C	22982	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	10	390969	390969	+	Missense_Mutation	SNP	C	C	A	rs200340134	alternate_allele	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	DIP2C	NM_014974	exon27	c.G3313T	p.V1105F	.	.	54	23	29	0	C|0.999;T|0.000	156
DIS3L	115752	bcgsc.ca	37	15	66624287	66624287	+	Silent	SNP	C	C	A	rs150002143	alternate_allele	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	DIS3L	NM_001143688	exon15	c.C2610A	p.T870T	.	.	81	4	48	0	C|1.000;T|0.000	92
DKK2	27123	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	107845310	107845310	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	DKK2	NM_014421	exon4	c.G581A	p.C194Y	.	.	179	79	84	0	.	661
DLC1	10395	bcgsc.ca	37	8	12952417	12952417	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	DLC1	NM_182643	exon12	c.G3377T	p.R1126L	.	.	76	5	35	0	.	657
DNAH8	1769	bcgsc.ca	37	6	38889263	38889263	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	DNAH8	NM_001206927	exon71	c.C10643T	p.A3548V	.	.	72	4	44	0	.	615
DNAH9	1770	bcgsc.ca	37	17	11514988	11514988	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	DNAH9	NM_001372	exon4	c.C795A	p.I265I	.	.	68	4	48	0	.	168
DNAJB12	54788	bcgsc.ca	37	10	74095679	74095679	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	DNAJB12	NM_017626	exon8	c.G1119A	p.L373L	.	.	221	6	87	0	.	226
DNHD1	144132	bcgsc.ca	37	11	6588927	6588927	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	DNHD1	NM_144666	exon36	c.T12188C	p.L4063P	.	.	68	4	41	0	.	24
DOCK11	139818	bcgsc.ca	37	X	117788574	117788574	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	DOCK11	NM_144658	exon43	c.T4705C	p.F1569L	.	.	120	5	38	0	.	93
DOCK9	23348	bcgsc.ca	37	13	99538788	99538788	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	DOCK9	NM_001130049	exon19	c.G2137A	p.E713K	.	.	64	4	30	0	.	90
DPF3	8110	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	73159816	73159816	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	DPF3	NM_012074	exon7	c.C710T	p.S237F	.	.	462	175	159	0	.	1
DRP2	1821	bcgsc.ca	37	X	100503529	100503529	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	DRP2	NM_001939	exon14	c.T1481C	p.L494S	.	.	75	4	30	0	.	132
DSEL	92126	bcgsc.ca	37	18	65179169	65179169	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	DSEL	NM_032160	exon2	c.A2707G	p.T903A	.	.	78	4	48	0	.	157
DTNB	1838	bcgsc.ca	37	2	25678325	25678325	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	DTNB	NM_021907	exon11	c.A1118G	p.D373G	.	.	66	4	35	0	.	137
DTX2P1-UPK3BP1-PMS2P11	441263	ucsc.edu	37	7	76610212	76610212	+	RNA	SNP	A	A	G	rs2270252		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	.	.	.	.	.	.	87	23	29	8	.	.
DYRK3	8444	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	206820946	206820946	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	DYRK3	NM_003582	exon3	c.G403T	p.A135S	.	.	287	177	79	0	.	333
EHBP1	23301	bcgsc.ca	37	2	62974567	62974567	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	EHBP1	NM_001142616	exon3	c.A142G	p.S48G	.	.	193	6	110	0	.	154
EHMT1	79813	broad.mit.edu	37	9	140637837	140637837	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	EHMT1	NM_001145527	exon5	c.G838T	p.V280F	.	.	33	10	12	0	.	154
EIF4A2	1974	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	186504304	186504304	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	EIF4A2	NM_001967	exon7	c.C641T	p.S214F	.	.	405	154	138	0	.	291
ELSPBP1	64100	bcgsc.ca	37	19	48517464	48517464	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ELSPBP1	NM_022142	exon3	c.A107G	p.K36R	.	.	287	7	97	0	.	90
ENO1	2023	bcgsc.ca	37	1	8934928	8934928	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ENO1	NM_001428	exon2	c.T40C	p.S14P	.	.	72	5	38	0	.	652
ENTPD6	955	bcgsc.ca	37	20	25199239	25199239	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ENTPD6	NM_001247	exon10	c.A932G	p.E311G	.	.	87	8	38	0	.	90
EPHA6	285220	bcgsc.ca	37	3	97467517	97467517	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	EPHA6	NM_001080448	exon18	c.A3365G	p.H1122R	.	.	165	5	71	0	.	1561
EPS8L3	79574	bcgsc.ca	37	1	110300134	110300134	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	EPS8L3	NM_139053	exon11	c.T941C	p.L314P	.	.	84	5	41	0	.	93
EPS8L3	79574	bcgsc.ca	37	1	110300165	110300165	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	EPS8L3	NM_139053	exon11	c.A910G	p.T304A	.	.	86	4	36	0	.	93
ESPNL	339768	broad.mit.edu;mdanderson.org	37	2	239009145	239009145	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ESPNL	NM_194312	exon1	c.C85T	p.P29S	.	.	24	11	9	0	.	69
FAF1	11124	bcgsc.ca	37	1	51061864	51061864	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FAF1	NM_007051	exon9	c.T769C	p.S257P	.	.	115	5	75	1	.	652
FAM135B	51059	bcgsc.ca	37	8	139164129	139164129	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FAM135B	NM_015912	exon13	c.T2589C	p.P863P	.	.	178	6	80	0	.	31
FAM169A	26049	bcgsc.ca	37	5	74100423	74100423	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FAM169A	NM_015566	exon8	c.T807C	p.S269S	.	.	146	5	57	0	.	22
FAM205A	259308	ucsc.edu	37	9	34724059	34724059	+	Missense_Mutation	SNP	G	G	A	rs472644	bycluster;by2hit2allele;byhapmap	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_001141917	exon4	c.C3178T	p.H1060Y	.	.	76	16	36	0	A|1.000;|0.000	.
FAM205B	389715	broad.mit.edu	37	9	34835480	34835480	+	RNA	SNP	C	C	T	rs75725332	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	.	.	.	.	.	.	46	3	35	0	C|0.500;T|0.500	.
FAM45B	55855	ucsc.edu	37	10	120897151	120897151	+	RNA	SNP	C	C	T	rs34073025		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FAM45B	.	.	.	.	.	.	196	80	100	28	.	63
FAM83G	644815	bcgsc.ca	37	17	18881726	18881726	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FAM83G	NM_001039999	exon5	c.A1253G	p.D418G	.	.	95	6	71	0	.	69
FAM86C1	55199	ucsc.edu	37	11	71504475	71504475	+	Missense_Mutation	SNP	T	T	C	rs80206030	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FAM86C1	NM_018172	exon3	c.T209C	p.V70A	.	.	234	99	73	21	T|0.375;C|0.625	90
FAM8A1	51439	hgsc.bcm.edu	37	6	17602826	17602826	+	Nonsense_Mutation	SNP	G	G	T	rs74444948	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FAM8A1	NM_016255	exon2	c.G718T	p.E240X	.	.	101	10	54	0	G|0.992;T|0.008	90
FARP1	10160	bcgsc.ca	37	13	99098435	99098435	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FARP1	NM_005766	exon25	c.C2880T	p.C960C	.	.	90	5	56	0	.	290
FAT4	79633	bcgsc.ca	37	4	126373203	126373203	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FAT4	NM_024582	exon9	c.A11032G	p.T3678A	.	.	135	5	80	0	.	108
FBN1	2200	bcgsc.ca	37	15	48729972	48729972	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FBN1	NM_000138	exon51	c.A6306G	p.E2102E	.	.	86	4	48	0	.	92
FBXO4	26272	hgsc.bcm.edu	37	5	41925435	41925435	+	Missense_Mutation	SNP	C	C	G	rs2231917		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FBXO4	NM_033484	exon1	c.C24G	p.S8R	.	.	36	22	2	0	C|0.977;G|0.023	227
FBXW4	6468	bcgsc.ca	37	10	103436105	103436105	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FBXW4	NM_022039	exon2	c.A349G	p.R117G	.	.	44	4	35	0	.	226
FCGBP	8857	ucsc.edu	37	19	40408268	40408268	+	Missense_Mutation	SNP	G	G	T	rs34938990	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FCGBP	NM_003890	exon8	c.C4571A	p.T1524N	.	.	213	41	72	0	G|0.782;T|0.218	98
FEM1C	56929	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	114861063	114861063	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FEM1C	NM_020177	exon3	c.T796G	p.L266V	.	.	223	64	95	0	.	155
FLG	2312	bcgsc.ca	37	1	152280614	152280614	+	Missense_Mutation	SNP	C	C	G	rs3120645	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FLG	NM_002016	exon3	c.G6748C	p.E2250Q	.	.	967	83	154	0	C|0.985;G|0.014;T|0.000	106
FLG	2312	ucsc.edu	37	1	152280685	152280685	+	Missense_Mutation	SNP	C	C	A	rs71585892	alternate_allele	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FLG	NM_002016	exon3	c.G6677T	p.G2226V	.	.	1197	133	163	0	ACTGC|0.500;CCGGA|0.500	106
FLG	2312	ucsc.edu	37	1	152280688	152280688	+	Missense_Mutation	SNP	A	A	G	rs116918835		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FLG	NM_002016	exon3	c.T6674C	p.V2225A	.	.	1217	151	164	2	A|1.000;G|0.000	106
FLG	2312	ucsc.edu;bcgsc.ca	37	1	152280597	152280597	+	Silent	SNP	A	A	G	rs3126077	bycluster;byfrequency;by2hit2allele	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FLG	NM_002016	exon3	c.T6765C	p.D2255D	.	.	1003	124	154	1	A|0.985;G|0.015	106
FLG2	388698	ucsc.edu	37	1	152328411	152328411	+	Silent	SNP	A	A	G	rs6679449	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FLG2	NM_001014342	exon3	c.T1851C	p.S617S	.	.	469	71	69	0	A|0.598;G|0.402	151
FLNB	2317	broad.mit.edu;bcgsc.ca	37	3	58097919	58097919	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FLNB	NM_001457	exon18	c.G2619T	p.K873N	.	.	118	6	66	0	.	593
FLT4	2324	broad.mit.edu;mdanderson.org	37	5	180045886	180045886	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FLT4	NM_182925	exon21	c.C2885A	p.A962D	.	.	33	7	11	0	.	1490
FNDC7	163479	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	109270564	109270564	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FNDC7	NM_001144937	exon7	c.G1246A	p.D416N	.	.	200	91	96	0	.	92
FOXG1	2290	hgsc.bcm.edu;broad.mit.edu;mdanderson.org	37	14	29237348	29237348	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FOXG1	NM_005249	exon1	c.G863A	p.R288H	.	.	37	16	9	0	.	660
FRG1	2483	bcgsc.ca	37	4	190878577	190878577	+	Missense_Mutation	SNP	A	A	G	rs75883191	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FRG1	NM_004477	exon6	c.A457G	p.N153D	.	.	607	40	134	4	A|0.700;G|0.300	90
FRG1B	284802	bcgsc.ca	37	20	29628233	29628233	+	RNA	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FRG1B	.	.	.	.	.	.	3103	93	200	3	.	22
FRG1B	284802	bcgsc.ca	37	20	29628236	29628236	+	RNA	SNP	G	G	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FRG1B	.	.	.	.	.	.	3131	87	199	3	.	22
FRG1B	284802	mdanderson.org	37	20	29628278	29628278	+	RNA	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FRG1B	.	.	.	.	.	.	2274	97	159	2	.	22
FRG1B	284802	ucsc.edu	37	20	29625935	29625935	+	RNA	SNP	A	A	G	rs62198354	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FRG1B	.	.	.	.	.	.	257	127	73	0	A|0.417;G|0.583	22
FUT9	10690	bcgsc.ca	37	6	96651496	96651496	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FUT9	NM_006581	exon3	c.T465C	p.T155T	.	.	121	5	66	0	.	95
FUZ	80199	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	50314913	50314913	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	FUZ	NM_025129	exon4	c.T362C	p.V121A	.	.	195	73	102	0	.	90
GALNT4	8693	bcgsc.ca	37	12	89916882	89916882	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_003774	exon1	c.G1445A	p.G482D	.	.	99	5	60	0	.	.
GCN1L1	10985	bcgsc.ca	37	12	120611886	120611886	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	GCN1L1	NM_006836	exon13	c.T1181C	p.L394P	.	.	82	4	56	0	.	94
GDPD4	220032	bcgsc.ca	37	11	76982351	76982351	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	GDPD4	NM_182833	exon5	c.C295T	p.L99L	.	.	149	5	96	0	.	69
GFRAL	389400	bcgsc.ca	37	6	55266630	55266630	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	GFRAL	NM_207410	exon9	c.C1164T	p.I388I	.	.	184	6	80	0	.	154
GGA2	23062	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	23489767	23489767	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	GGA2	NM_015044	exon13	c.C1214T	p.P405L	.	.	101	44	58	0	.	91
GJA1	2697	bcgsc.ca	37	6	121768900	121768900	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	GJA1	NM_000165	exon2	c.A907G	p.K303E	.	.	59	4	39	0	.	92
GLB1	2720	ucsc.edu	37	3	33063108	33063108	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	GLB1	NM_000404	exon12	c.T1183C	p.S395P	.	.	41	4	21	0	.	135
GLYR1	84656	ucsc.edu	37	16	4863829	4863829	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	GLYR1	NM_032569	exon12	c.G1028A	p.G343D	.	.	46	4	20	0	.	90
GNAO1	2775	bcgsc.ca	37	16	56374836	56374836	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	GNAO1	NM_138736	exon7	c.A814G	p.K272E	.	.	141	5	69	0	.	659
GNL2	29889	bcgsc.ca	37	1	38047826	38047826	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	GNL2	NM_013285	exon8	c.A907G	p.K303E	.	.	83	5	48	0	.	91
GNPTAB	79158	bcgsc.ca	37	12	102153919	102153919	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	GNPTAB	NM_024312	exon16	c.T3138C	p.D1046D	.	.	67	4	40	0	.	92
GNRHR	2798	bcgsc.ca	37	4	68606394	68606394	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	GNRHR	NM_000406	exon3	c.A791G	p.K264R	.	.	149	7	71	0	.	523
GOLGA8B	440270	broad.mit.edu	37	15	34819943	34819943	+	Missense_Mutation	SNP	C	C	T	rs347877	bycluster	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_001023567	exon16	c.G1702A	p.V568I	.	.	261	47	79	1	T|1.000;|0.000	.
GPAM	57678	bcgsc.ca	37	10	113920562	113920562	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	GPAM	NM_020918	exon16	c.A1559G	p.D520G	.	.	171	6	82	1	.	92
GPRIN3	285513	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	90170546	90170546	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	GPRIN3	NM_198281	exon2	c.C716T	p.T239I	.	.	101	39	59	0	.	71
GRID1	2894	bcgsc.ca	37	10	87487674	87487674	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	GRID1	NM_017551	exon10	c.A1471G	p.R491G	.	.	157	5	68	0	.	142
GRID2	2895	bcgsc.ca	37	4	94159531	94159531	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	GRID2	NM_001510	exon8	c.A1135T	p.S379C	.	.	80	4	55	0	.	159
GRIN2A	2903	bcgsc.ca	37	16	9892144	9892144	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	GRIN2A	NM_000833	exon12	c.T2346C	p.F782F	.	.	63	4	30	0	.	349
GTF2I	2969	bcgsc.ca	37	7	74133207	74133207	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	GTF2I	NM_032999	exon12	c.A890G	p.Q297R	.	.	92	4	67	0	.	90
GTF2IRD2P1	401375	broad.mit.edu	37	7	72658179	72658179	+	RNA	SNP	T	T	C	rs62464331		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	.	.	.	.	.	.	229	8	85	0	.	.
GYPE	2996	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	144801632	144801632	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_198682	exon2	c.C68A	p.T23N	.	.	1142	206	188	0	.	.
H6PD	9563	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	1	9305494	9305494	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	H6PD	NM_004285	exon2	c.G501A	p.W167X	.	.	42	20	30	0	.	90
HBP1	26959	hgsc.bcm.edu	37	7	106826381	106826381	+	Frame_Shift_Del	DEL	C	C	-	rs199499040		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	HBP1	NM_001244262	exon4	c.564delC	p.H188fs	.	.	76	0	40	0	-|0.989;TT|0.011	91
HEATR5B	54497	bcgsc.ca	37	2	37234301	37234301	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	HEATR5B	NM_019024	exon29	c.G4669A	p.G1557S	.	.	219	7	108	1	.	142
HERC1	8925	bcgsc.ca	37	15	63926951	63926951	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	HERC1	NM_003922	exon66	c.A12551G	p.E4184G	.	.	210	6	112	0	.	666
HERC2	8924	bcgsc.ca	37	15	28511069	28511069	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	HERC2,NS,carcinoma,-2	HERC2	NM_004667	exon13	c.G1650A	p.G550G	.	.	70	4	35	0	.	234
HERC2	8924	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	28446674	28446674	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	HERC2	NM_004667	exon48	c.C7644G	p.S2548R	.	.	378	146	135	0	.	234
HERC2P2	400322	ucsc.edu	37	15	23300033	23300033	+	RNA	SNP	T	T	C	rs1058831	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	.	.	.	.	.	.	231	58	94	14	T|0.716;C|0.284	.
HERC6	55008	bcgsc.ca	37	4	89361110	89361110	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	HERC6	NM_017912	exon21	c.T2640C	p.Y880Y	.	.	122	6	65	0	.	658
HINT3	135114	bcgsc.ca	37	6	126288115	126288115	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	HINT3	NM_138571	exon2	c.A284G	p.N95S	.	.	94	6	45	0	.	90
HLA-A	3105	bcgsc.ca	37	6	29912373	29912373	+	Missense_Mutation	SNP	T	T	G	rs1137110	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	HLA-A	NM_001242758	exon5	c.T992G	p.M331R	.	.	479	52	142	0	T|0.947;G|0.053	92
HLA-DRB1	3123	bcgsc.ca	37	6	32549587	32549587	+	Silent	SNP	T	T	G	rs201597010	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	HLA-DRB1	NM_002124	exon3	c.A399C	p.S133S	.	.	218	20	80	0	T|0.991;G|0.008	1
HLA-DRB5	3127	bcgsc.ca	37	6	32487353	32487353	+	Missense_Mutation	SNP	T	T	C	rs114293611	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	HLA-DRB5	NM_002125	exon3	c.A446G	p.N149S	.	.	59	34	40	12	T|0.525;C|0.475	90
HNRNPC	3183	bcgsc.ca	37	14	21679583	21679583	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	HNRNPC	NM_031314	exon8	c.A819G	p.E273E	.	.	242	8	107	0	.	90
HSD17B3	3293	bcgsc.ca	37	9	99007639	99007639	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	HSD17B3	NM_000197	exon8	c.C594T	p.Y198Y	.	.	73	4	51	0	.	90
HSPA6	3310	ucsc.edu	37	1	161496178	161496178	+	Missense_Mutation	SNP	G	G	A	rs368844	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	HSPA6	NM_002155	exon1	c.G1730A	p.R577Q	.	.	314	54	70	15	G|0.906;A|0.094	226
HSPG2	3339	bcgsc.ca	37	1	22191341	22191341	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	HSPG2	NM_005529	exon36	c.T4621C	p.C1541R	.	.	83	4	38	0	.	141
ICAM5	7087	broad.mit.edu;bcgsc.ca;mdanderson.org	37	19	10404754	10404754	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ICAM5	NM_003259	exon8	c.T1750C	p.W584R	.	.	83	23	42	1	.	153
ICMT	23463	bcgsc.ca	37	1	6285245	6285245	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ICMT	NM_012405	exon5	c.A750G	p.E250E	.	.	118	5	62	0	.	650
IFIT3	3437	bcgsc.ca	37	10	91099035	91099035	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	IFIT3	NM_001549	exon2	c.A623G	p.Y208C	.	.	146	5	91	0	.	90
IFNA17	3451	ucsc.edu	37	9	21227622	21227622	+	Missense_Mutation	SNP	A	A	C	rs9298814	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	IFNA17	NM_021268	exon1	c.T551G	p.I184R	.	.	738	265	176	12	A|0.719;C|0.281	90
IFNA17	3451	ucsc.edu	37	9	21227651	21227651	+	Silent	SNP	A	A	G	rs7025879		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	IFNA17	NM_021268	exon1	c.T522C	p.S174S	.	.	624	233	166	14	A|0.753;G|0.247	90
IFNA8	3445	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	21409564	21409564	+	Missense_Mutation	SNP	T	T	C	rs28383787	alternate_allele	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	IFNA8	NM_002170	exon1	c.T389C	p.I130T	.	.	258	110	102	0	.	90
IL12RB2	3595	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	67861669	67861669	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	IL12RB2	NM_001559	exon16	c.T2486C	p.L829P	.	.	335	124	130	0	.	92
IL21R	50615	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	27460101	27460101	+	Missense_Mutation	SNP	G	G	T	rs36031126	alternate_allele	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	IL21R	NM_181079	exon10	c.G1180T	p.G394C	.	.	56	19	19	0	G|0.986;A|0.014	660
IMPA1	3612	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	82591405	82591405	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	IMPA1	NM_001144878	exon5	c.A435G	p.T145T	.	.	169	66	106	1	.	226
IQCG	84223	bcgsc.ca	37	3	197665462	197665462	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	IQCG	NM_032263	exon5	c.A472G	p.T158A	.	.	279	7	117	0	.	90
IRS4	8471	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	X	107976586	107976586	+	Missense_Mutation	SNP	G	G	A	rs189095515		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	IRS4	NM_003604	exon1	c.C2989T	p.L997F	.	.	112	103	35	0	G|0.999;A|0.001	623
ITCH	83737	bcgsc.ca	37	20	33077682	33077682	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ITCH	NM_001257137	exon23	c.T2393C	p.I798T	.	.	119	6	50	0	.	659
ITGAD	3681	bcgsc.ca	37	16	31435810	31435810	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ITGAD	NM_005353	exon29	c.A3284G	p.D1095G	.	.	133	5	78	0	.	226
ITLN2	142683	bcgsc.ca	37	1	160920863	160920863	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ITLN2	NM_080878	exon4	c.T411C	p.S137S	.	.	400	10	89	0	.	91
ITSN1	6453	bcgsc.ca	37	21	35254706	35254706	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ITSN1	NM_003024	exon35	c.A4501G	p.T1501A	.	.	95	4	65	0	.	94
JAKMIP1	152789	ucsc.edu	37	4	6042424	6042424	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	JAKMIP1	NM_001099433	exon18	c.A2117G	p.K706R	.	.	39	4	20	0	.	292
KALRN	8997	bcgsc.ca	37	3	124193508	124193508	+	Splice_Site	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	KALRN	NM_003947	exon26	c.4026-2A>G	.	.	.	131	5	83	0	.	738
KBTBD3	143879	bcgsc.ca	37	11	105924127	105924127	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	KBTBD3	NM_152433	exon3	c.T1289C	p.L430P	.	.	78	4	48	0	.	91
KCNB2	9312	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	73848335	73848335	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	KCNB2	NM_004770	exon3	c.C745G	p.L249V	.	.	294	111	124	0	.	158
KCNJ11	3767	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	17409285	17409285	+	Silent	SNP	C	C	T	rs140636367	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	KCNJ11	NM_000525	exon1	c.G354A	p.S118S	.	.	71	13	42	0	C|0.999;T|0.001	91
KCNJ18	100134444	bcgsc.ca	37	17	21318948	21318948	+	Silent	SNP	C	C	T	rs112314728		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_001194958	exon3	c.C294T	p.F98F	.	.	157	30	84	3	C|0.500;T|0.500	.
KCNJ18	100134444	bcgsc.ca	37	17	21318951	21318951	+	Silent	SNP	C	C	T	rs75757803		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_001194958	exon3	c.C297T	p.G99G	.	.	156	29	81	2	C|0.500;T|0.500	.
KCNJ3	3760	bcgsc.ca	37	2	155555815	155555815	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	KCNJ3	NM_001260509	exon1	c.C528T	p.L176L	.	.	110	5	60	0	.	92
KCNJ5	3762	broad.mit.edu	37	11	128781573	128781573	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	KCNJ5	NM_000890	exon2	c.C405T	p.G135G	.	.	497	10	145	0	.	91
KCNT2	343450	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	196309631	196309631	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	KCNT2	NM_198503	exon16	c.A1623G	p.R541R	.	.	199	42	70	0	.	159
KCTD18	130535	bcgsc.ca	37	2	201355016	201355016	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	KCTD18	NM_152387	exon7	c.A1088G	p.K363R	.	.	145	5	65	0	.	91
KDM5A	5927	bcgsc.ca	37	12	464391	464391	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	KDM5A	NM_001042603	exon7	c.T803C	p.V268A	.	.	87	5	60	0	.	227
KDM5B	10765	bcgsc.ca	37	1	202702994	202702994	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	KDM5B	NM_006618	exon23	c.T3444C	p.A1148A	.	.	204	6	57	0	.	273
KERA	11081	bcgsc.ca	37	12	91449976	91449976	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	KERA	NM_007035	exon2	c.A83G	p.E28G	.	.	115	5	60	1	.	91
KIAA0586	9786	bcgsc.ca	37	14	58958863	58958863	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	KIAA0586	NM_001244189	exon28	c.A4019G	p.E1340G	.	.	202	6	102	0	.	23
KIAA2026	158358	bcgsc.ca	37	9	5924816	5924816	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	KIAA2026	NM_001017969	exon7	c.T2528C	p.F843S	.	.	149	6	68	0	.	92
KIAA2026	158358	bcgsc.ca	37	9	5969222	5969222	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	KIAA2026	NM_001017969	exon3	c.T1009C	p.C337R	.	.	146	5	86	0	.	92
KIDINS220	57498	bcgsc.ca	37	2	8930035	8930035	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	KIDINS220	NM_020738	exon14	c.C1596A	p.F532L	.	.	74	4	64	0	.	93
KLRC2	3822	hgsc.bcm.edu	37	12	10588444	10588444	+	Missense_Mutation	SNP	G	G	C	rs34194304		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	KLRC2	NM_002260	exon1	c.C142G	p.P48A	.	.	568	39	139	0	.	514
KRT73	319101	bcgsc.ca	37	12	53008367	53008367	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	KRT73	NM_175068	exon4	c.A815G	p.E272G	.	.	112	5	62	0	.	157
KRTAP16-1	100505753	bcgsc.ca	37	17	39464562	39464562	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_001146182	exon1	c.A944G	p.E315G	.	.	131	5	57	0	.	.
KRTAP9-2	83899	ucsc.edu	37	17	39382942	39382942	+	Silent	SNP	C	C	A	rs79961737		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	KRTAP9-2	NM_031961	exon1	c.C36A	p.T12T	.	.	249	101	67	23	C|0.125;A|0.875	23
LAMA1	284217	bcgsc.ca	37	18	7050891	7050891	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	LAMA1	NM_005559	exon4	c.T390C	p.P130P	.	.	102	5	60	0	.	149
LAMA4	3910	bcgsc.ca	37	6	112486446	112486446	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	LAMA4	NM_001105206	exon13	c.A1584G	p.E528E	.	.	221	7	104	0	.	140
LGALS9B	284194	broad.mit.edu	37	17	20363690	20363690	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	LGALS9B	NM_001042685	exon2	c.G106A	p.A36T	.	.	838	15	185	0	.	23
LHFPL1	340596	bcgsc.ca	37	X	111903911	111903911	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	LHFPL1	NM_178175	exon3	c.G425T	p.W142L	.	.	137	5	41	0	.	130
LILRA6	79168	ucsc.edu	37	19	54745989	54745989	+	Missense_Mutation	SNP	G	G	C	rs16985555	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	LILRA6	NM_024318	exon3	c.C268G	p.Q90E	.	.	976	412	146	18	G|0.667;C|0.333	24
LILRB1	10859	broad.mit.edu	37	19	55145453	55145453	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	LILRB1	NM_001081637	exon9	c.C1344T	p.T448T	.	.	303	14	96	0	.	137
LIN7A	8825	bcgsc.ca	37	12	81283073	81283073	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	LIN7A	NM_004664	exon2	c.T158C	p.L53P	.	.	142	6	89	0	.	516
LINGO2	158038	bcgsc.ca	37	9	27950311	27950311	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	LINGO2	NM_001258282	exon7	c.T359C	p.V120A	.	.	140	5	92	0	.	516
LMOD2	442721	bcgsc.ca	37	7	123302275	123302275	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	LMOD2	NM_207163	exon2	c.A635G	p.D212G	.	.	102	5	65	0	.	68
LNX1	84708	bcgsc.ca	37	4	54440062	54440062	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	LNX1	NM_001126328	exon2	c.T108A	p.D36E	.	.	132	5	65	0	.	229
LOC389033	0	ucsc.edu	37	2	130681211	130681211	+	RNA	SNP	C	C	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	.	.	.	.	.	.	26	4	11	0	.	.
LOC728323	0	broad.mit.edu;ucsc.edu	37	2	243061143	243061143	+	RNA	SNP	A	A	G	rs2722531		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	.	.	.	.	.	.	396	46	122	1	.	.
LRP12	29967	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	105510097	105510097	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	LRP12	NM_013437	exon5	c.A683G	p.K228R	.	.	221	105	110	0	.	90
LRP6	4040	bcgsc.ca	37	12	12284964	12284964	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	LRP6	NM_002336	exon18	c.T3761C	p.F1254S	.	.	195	6	78	0	.	661
LRPPRC	10128	bcgsc.ca	37	2	44203370	44203370	+	Splice_Site	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	LRPPRC	NM_133259	exon7	c.651-2A>G	.	.	.	64	4	39	0	.	93
LRRIQ1	84125	bcgsc.ca	37	12	85450584	85450584	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	LRRIQ1	NM_001079910	exon8	c.A2013G	p.R671R	.	.	110	5	56	0	.	95
LTBP2	4053	bcgsc.ca	37	14	74969370	74969370	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	LTBP2	NM_000428	exon34	c.T5156C	p.V1719A	.	.	109	6	54	0	.	92
LTBP2	4053	hgsc.bcm.edu	37	14	74976564	74976565	+	Splice_Site	INS	-	-	GAAATAGGGCATTGCATTCTGTGTG	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	LTBP2	NM_000428	exon22	c.3152-2->CACACAGAATGCAATGCCCTATTTC	.	.	.	54	0	40	0	.	92
LUZP6	767558	ucsc.edu;bcgsc.ca	37	7	135612338	135612338	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	.	.	.	.	.	.	46	4	42	0	.	.
MAGEC1	9947	ucsc.edu	37	X	140994115	140994115	+	Missense_Mutation	SNP	T	T	C	rs138660605	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MAGEC1	NM_005462	exon4	c.T925C	p.S309P	.	.	516	67	130	1	T|0.983;C|0.017	133
MAK	4117	bcgsc.ca	37	6	10803968	10803968	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MAK	NM_005906	exon7	c.A648G	p.L216L	.	.	78	5	41	0	.	335
MAPK10	5602	bcgsc.ca	37	4	87115492	87115492	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MAPK10	NM_002753	exon3	c.T63C	p.C21C	.	.	90	4	64	0	.	1402
MAPK8IP3	23162	ucsc.edu;bcgsc.ca	37	16	1816752	1816752	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MAPK8IP3	NM_015133	exon24	c.T2965C	p.W989R	.	.	48	6	27	0	.	1109
MARK2	2011	broad.mit.edu;bcgsc.ca	37	11	63665732	63665732	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MARK2	NM_001163296	exon4	c.T317C	p.V106A	.	.	197	8	109	1	.	766
MAST2	23139	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	46488584	46488584	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MAST2	NM_015112	exon13	c.A1426G	p.M476V	.	.	337	143	121	1	.	581
MBD5	55777	bcgsc.ca	37	2	149247711	149247711	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MBD5	NM_018328	exon12	c.A3811G	p.R1271G	.	.	97	4	48	0	.	95
MCM2	4171	hgsc.bcm.edu	37	3	127323589	127323589	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MCM2	NM_004526	exon3	c.C375A	p.G125G	.	.	55	21	8	0	.	230
MCM2	4171	ucsc.edu;bcgsc.ca	37	3	127323790	127323790	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MCM2	NM_004526	exon4	c.A464G	p.E155G	.	.	44	4	33	0	.	230
MCM3AP	8888	bcgsc.ca	37	21	47664906	47664906	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MCM3AP	NM_003906	exon23	c.T4853C	p.F1618S	.	.	87	5	55	0	.	291
MCRS1	10445	bcgsc.ca	37	12	49957300	49957300	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MCRS1	NM_001012300	exon6	c.A626G	p.H209R	.	.	54	4	35	0	.	289
MED12	9968	bcgsc.ca	37	X	70360483	70360483	+	Splice_Site	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MED12	NM_005120	exon42	c.6045-2A>G	.	.	.	121	6	31	0	.	272
MED13	9969	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	60088347	60088347	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MED13	NM_005121	exon9	c.A1531G	p.I511V	.	.	539	148	155	0	.	136
MED13L	23389	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	116429410	116429410	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MED13L	NM_015335	exon17	c.G3349A	p.D1117N	.	.	128	48	57	0	.	232
MEIS1	4211	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	2	66667100	66667100	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MEIS1	NM_002398	exon3	c.C365A	p.A122D	.	.	87	26	45	0	.	226
MGA	23269	bcgsc.ca	37	15	41961925	41961925	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MGA	NM_001080541	exon2	c.A833G	p.D278G	.	.	77	4	54	0	.	522
MGA	23269	bcgsc.ca	37	15	41988934	41988934	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MGA	NM_001080541	exon3	c.T1726C	p.S576P	.	.	80	5	60	0	.	522
MICAL1	64780	bcgsc.ca	37	6	109766654	109766654	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MICAL1	NM_022765	exon21	c.A2752G	p.K918E	.	.	83	5	53	0	.	154
MICAL2	9645	bcgsc.ca	37	11	12183724	12183724	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MICAL2	NM_014632	exon3	c.A22G	p.K8E	.	.	79	4	38	0	.	92
MICAL3	57553	bcgsc.ca	37	22	18376583	18376583	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MICAL3	NM_015241	exon11	c.A1537G	p.T513A	.	.	78	4	44	0	.	68
MIR30B	407030	bcgsc.ca	37	8	135812835	135812835	+	RNA	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	.	.	.	.	.	.	61	4	47	0	.	.
MLH1	4292	broad.mit.edu;bcgsc.ca	37	3	37048518	37048518	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MLH1	NM_000249	exon5	c.T417C	p.P139P	.	.	92	5	58	0	.	2559
MLL3	58508	ucsc.edu;bcgsc.ca	37	7	151935910	151935910	+	Missense_Mutation	SNP	C	C	T	rs4024419	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MLL3	NM_170606	exon15	c.G2534A	p.G845E	.	.	178	36	82	0	C|0.967;T|0.033	1398
MLL3	58508	bcgsc.ca	37	7	151935853	151935853	+	Missense_Mutation	SNP	T	T	C	rs77064988	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MLL3	NM_170606	exon15	c.A2591G	p.E864G	.	.	225	57	92	1	T|0.300;C|0.700	1398
MLL3	58508	bcgsc.ca	37	7	151949776	151949776	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MLL3	NM_170606	exon10	c.G1324T	p.G442C	.	.	98	5	48	0	.	1398
MLLT4	4301	bcgsc.ca	37	6	168352255	168352255	+	Silent	SNP	G	G	A	rs145659193	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MLLT4	NM_001040000	exon29	c.G4200A	p.P1400P	.	.	78	4	37	0	G|1.000;A|0.000	685
MLXIP	22877	ucsc.edu	37	12	122618441	122618441	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MLXIP	NM_014938	exon9	c.A1639G	p.T547A	.	.	36	4	22	0	.	92
MMP19	4327	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	12	56231749	56231750	+	Frame_Shift_Del	DEL	CA	CA	-	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	CA	CA	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MMP19	NM_002429	exon7	c.937_938del	p.313_313del	.	.	84	33	53	0	.	227
MPP5	64398	bcgsc.ca	37	14	67787934	67787934	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MPP5	NM_022474	exon13	c.G1698T	p.V566V	.	.	127	5	76	0	.	91
MRE11A	4361	bcgsc.ca	37	11	94204847	94204847	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MRE11A	NM_005591	exon8	c.A738G	p.E246E	.	.	258	7	117	0	.	722
MRPL49	740	broad.mit.edu;bcgsc.ca;mdanderson.org	37	11	64889822	64889822	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MRPL49	NM_004927	exon1	c.G4C	p.A2P	.	.	58	18	30	1	.	90
MRPS18C	51023	bcgsc.ca	37	4	84379528	84379528	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MRPS18C	NM_016067	exon3	c.A180G	p.E60E	.	.	128	6	71	0	.	90
MRPS22	56945	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	139062911	139062911	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MRPS22	NM_020191	exon1	c.A43T	p.R15W	.	.	64	18	26	0	.	93
MST1L	11223	ucsc.edu	37	1	17085564	17085564	+	Missense_Mutation	SNP	A	A	G	rs80308386	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_001271733	exon9	c.T1157C	p.L386P	.	.	137	34	38	6	A|0.625;G|0.375	.
MST1P2	11209	ucsc.edu	37	1	16975994	16975994	+	RNA	SNP	T	T	C	rs61772255	bycluster;byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	.	.	.	.	.	.	200	41	84	8	T|0.250;C|0.750	.
MTFR2	113115	broad.mit.edu	37	6	136560840	136560840	+	Silent	SNP	A	A	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_138419	exon6	c.T633A	p.P211P	.	.	164	5	73	0	.	.
MTHFD2L	441024	bcgsc.ca	37	4	75040269	75040269	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MTHFD2L	NM_001144978	exon2	c.C190A	p.Q64K	.	.	90	4	53	0	.	91
MTMR14	64419	ucsc.edu;bcgsc.ca	37	3	9731800	9731800	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MTMR14	NM_001077526	exon17	c.G1586C	p.S529T	.	.	46	4	27	0	.	91
MUC16	94025	bcgsc.ca	37	19	8999441	8999441	+	Silent	SNP	G	G	A	rs80293661		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MUC16	NM_024690	exon56	c.C40734T	p.I13578I	.	.	381	25	111	0	G|0.500;A|0.500	566
MUC17	140453	broad.mit.edu	37	7	100686835	100686835	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MUC17	NM_001040105	exon3	c.C12138T	p.T4046T	.	.	374	7	126	0	.	95
MUC17	140453	ucsc.edu	37	7	100677378	100677378	+	Missense_Mutation	SNP	C	C	A	rs143956720	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MUC17	NM_001040105	exon3	c.C2681A	p.T894K	.	.	218	58	75	12	C|0.958;A|0.042	95
MUC17	140453	ucsc.edu	37	7	100677625	100677625	+	Silent	SNP	G	G	A	rs115078078	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MUC17	NM_001040105	exon3	c.G2928A	p.S976S	.	.	391	99	117	9	G|0.964;A|0.036	95
MUC17	140453	ucsc.edu	37	7	100683067	100683067	+	Silent	SNP	C	C	T	rs112360991		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MUC17	NM_001040105	exon3	c.C8370T	p.S2790S	.	.	187	38	55	4	C|0.500;T|0.500	95
MUC2	4583	bcgsc.ca	37	11	1093158	1093158	+	Silent	SNP	T	T	C	rs202045556		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MUC2	NM_002457	exon30	c.T4977C	p.T1659T	.	.	118	46	18	0	.	90
MUC2	4583	broad.mit.edu	37	11	1093349	1093349	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MUC2	NM_002457	exon30	c.C5168T	p.P1723L	.	.	165	7	64	1	.	90
MUC2	4583	ucsc.edu	37	11	1092557	1092557	+	Missense_Mutation	SNP	G	G	C	rs200605255		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MUC2	NM_002457	exon30	c.G4376C	p.S1459T	.	.	227	70	62	3	.	90
MUC4	4585	bcgsc.ca	37	3	195507941	195507941	+	Missense_Mutation	SNP	T	T	G	rs4927785	bycluster;alternate_allele	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MUC4	NM_018406	exon2	c.A10510C	p.T3504P	.	.	414	54	123	7	A|0.500;G|0.500	90
MUC4	4585	bcgsc.ca	37	3	195508046	195508046	+	Missense_Mutation	SNP	C	C	G	rs76458038		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MUC4	NM_018406	exon2	c.G10405C	p.D3469H	.	.	200	35	56	1	C|0.250;G|0.750	90
MUC4	4585	bcgsc.ca	37	3	195510030	195510030	+	Silent	SNP	C	C	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MUC4	NM_018406	exon2	c.G8421C	p.S2807S	.	.	284	32	94	1	.	90
MUC4	4585	bcgsc.ca	37	3	195511412	195511412	+	Missense_Mutation	SNP	T	T	A	rs199878638		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MUC4	NM_018406	exon2	c.A7039T	p.T2347S	.	.	243	56	62	1	.	90
MUC4	4585	bcgsc.ca	37	3	195511431	195511431	+	Silent	SNP	A	A	G	rs201715837	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MUC4	NM_018406	exon2	c.T7020C	p.T2340T	.	.	239	71	56	3	A|0.981;G|0.019	90
MUC4	4585	broad.mit.edu	37	3	195510636	195510636	+	Missense_Mutation	SNP	C	C	A	rs79484109	alternate_allele	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MUC4	NM_018406	exon2	c.G7815T	p.Q2605H	.	.	119	56	20	0	C|0.250;G|0.750	90
MUC4	4585	broad.mit.edu	37	3	195513207	195513207	+	Silent	SNP	A	A	G	rs78338106	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MUC4	NM_018406	exon2	c.T5244C	p.T1748T	.	.	349	74	101	1	A|0.756;G|0.244	90
MUC4	4585	broad.mit.edu	37	3	195513223	195513223	+	Missense_Mutation	SNP	C	C	G	rs2641777	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MUC4	NM_018406	exon2	c.G5228C	p.S1743T	.	.	324	61	99	1	C|0.988;G|0.012	90
MUC4	4585	mdanderson.org	37	3	195509861	195509861	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MUC4	NM_018406	exon2	c.T8590C	p.S2864P	.	.	283	58	95	7	.	90
MUC6	4588	bcgsc.ca	37	11	1016870	1016870	+	Silent	SNP	G	G	A	rs76307106		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MUC6	NM_005961	exon31	c.C5931T	p.P1977P	.	.	2121	100	179	1	A|0.000;C|0.000;G|1.000	23
MUC6	4588	bcgsc.ca	37	11	1017277	1017277	+	Missense_Mutation	SNP	A	A	G	rs111373859		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MUC6	NM_005961	exon31	c.T5524C	p.S1842P	.	.	1243	73	183	11	A|0.500;G|0.500	23
MUC6	4588	bcgsc.ca	37	11	1018025	1018025	+	Silent	SNP	C	C	A	rs10751677	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MUC6	NM_005961	exon31	c.G4776T	p.T1592T	.	.	437	193	101	0	C|0.597;A|0.403	23
MUC6	4588	bcgsc.ca	37	11	1018031	1018031	+	Silent	SNP	G	G	A	rs10751678	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MUC6	NM_005961	exon31	c.C4770T	p.P1590P	.	.	410	160	101	2	G|0.595;A|0.405	23
MUC7	4589	ucsc.edu	37	4	71347207	71347207	+	Missense_Mutation	SNP	T	T	C	rs78564790	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MUC7	NM_001145007	exon4	c.T746C	p.L249P	.	.	739	87	167	1	T|0.935;C|0.065	93
MYH3	4621	bcgsc.ca	37	17	10542191	10542191	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MYH3	NM_002470	exon26	c.A3338G	p.Q1113R	.	.	111	5	89	0	.	95
MYH6	4624	bcgsc.ca	37	14	23863110	23863110	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MYH6	NM_002471	exon22	c.A2693G	p.D898G	.	.	226	7	83	0	.	94
MYLK3	91807	bcgsc.ca	37	16	46743452	46743452	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MYLK3	NM_182493	exon12	c.A2399G	p.K800R	.	.	187	6	86	0	.	374
MYNN	55892	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	169504351	169504351	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MYNN	NM_001185118	exon9	c.A1718G	p.H573R	.	.	297	92	125	1	.	91
MYO9A	4649	bcgsc.ca	37	15	72270512	72270512	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	MYO9A	NM_006901	exon12	c.A1844G	p.N615S	.	.	289	7	114	0	.	93
MYOM1	8736	broad.mit.edu	37	18	3188882	3188882	+	Missense_Mutation	SNP	C	C	T	rs200770047		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	MYOM1,brain,glioma,+1	MYOM1	NM_003803	exon4	c.G635A	p.R212K	.	.	728	15	171	0	C|1.000;T|0.000	94
NAALADL1	10004	bcgsc.ca	37	11	64813345	64813345	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	NAALADL1	NM_005468	exon17	c.T1985C	p.L662S	.	.	88	4	47	0	.	90
NBPF9	400818	broad.mit.edu	37	1	144828583	144828583	+	Silent	SNP	G	G	A	rs76717388		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	.	.	.	.	.	.	518	51	106	0	G|0.500;A|0.500	.
NBPF9	400818	broad.mit.edu	37	1	144828683	144828683	+	Missense_Mutation	SNP	C	C	G	rs3183413		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	.	.	.	.	.	.	1374	85	167	1	.	.
NCAPG2	54892	bcgsc.ca	37	7	158447371	158447371	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	NCAPG2	NM_017760	exon22	c.T2662C	p.C888R	.	.	95	6	66	0	.	272
NCOR1P1	149934	bcgsc.ca	37	20	26084251	26084251	+	RNA	SNP	C	C	T	rs61752036	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	.	.	.	.	.	.	309	35	108	0	C|0.400;T|0.600	.
NCOR1P1	149934	ucsc.edu	37	20	26084261	26084261	+	RNA	SNP	A	A	G	rs61752354	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	.	.	.	.	.	.	310	41	108	3	A|0.500;G|0.500	.
ND5	0	broad.mit.edu;bcgsc.ca	37	MT	13344	13344	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	ENST00000361567	exon1	c.A1008G	p.K336K	.	.	302	282	82	0	.	.
NEK4	6787	bcgsc.ca	37	3	52778297	52778297	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	NEK4	NM_003157	exon11	c.A1852G	p.R618G	.	.	89	4	72	0	.	358
NES	10763	broad.mit.edu	37	1	156641698	156641698	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	NES	NM_006617	exon4	c.A2282G	p.E761G	.	.	590	7	132	0	.	520
NFYC	4802	bcgsc.ca	37	1	41232634	41232634	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	NFYC	NM_001142588	exon9	c.A873G	p.K291K	.	.	58	4	37	0	.	289
NHLRC3	387921	bcgsc.ca	37	13	39613707	39613707	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	NHLRC3	NM_001012754	exon3	c.G244A	p.D82N	.	.	61	5	38	0	.	91
NLGN4Y	22829	bcgsc.ca	37	Y	16734076	16734076	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_001164238	exon1	c.T77C	p.L26P	.	.	317	9	117	1	.	.
NLRP5	126206	bcgsc.ca	37	19	56539346	56539346	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	NLRP5	NM_153447	exon7	c.T1747C	p.F583L	.	.	136	5	73	0	.	162
NMT2	9397	bcgsc.ca	37	10	15172224	15172224	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	NMT2	NM_004808	exon7	c.C807A	p.I269I	.	.	92	4	65	0	.	91
NOMO1	23420	broad.mit.edu	37	16	14989495	14989495	+	Missense_Mutation	SNP	G	G	A	rs202039700		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	NOMO1	NM_014287	exon31	c.G3662A	p.R1221Q	.	.	319	8	94	1	G|0.999;A|0.001	45
NPHP3	27031	bcgsc.ca	37	3	132427083	132427083	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	NPHP3	NM_153240	exon7	c.T1137C	p.C379C	.	.	137	5	61	0	.	91
NPY2R	4887	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	4	156135578	156135578	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	NPY2R	NM_000910	exon2	c.C487G	p.R163G	.	.	48	19	14	0	.	523
NSMCE2	286053	hgsc.bcm.edu	37	8	126114663	126114664	+	Frame_Shift_Ins	INS	-	-	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	NSMCE2	NM_173685	exon3	c.91_92insA	p.Q31fs	.	.	522	2	140	0	.	153
NTNG1	22854	bcgsc.ca	37	1	107963759	107963759	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	NTNG1	NM_001113228	exon7	c.A1207G	p.K403E	.	.	204	6	112	0	.	140
NTPCR	84284	bcgsc.ca	37	1	233091385	233091385	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	NTPCR	NM_032324	exon2	c.A117G	p.E39E	.	.	172	5	55	0	.	91
NTRK1	4914	bcgsc.ca	37	1	156841493	156841493	+	Missense_Mutation	SNP	T	T	C	rs199800193		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	NTRK1	NM_001012331	exon7	c.T796C	p.W266R	.	.	192	6	48	0	T|0.999;C|0.001	1393
NUBP1	4682	bcgsc.ca	37	16	10846486	10846486	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	NUBP1	NM_002484	exon4	c.A278G	p.D93G	.	.	179	7	82	0	.	92
NUP155	9631	bcgsc.ca	37	5	37363996	37363996	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	NUP155	NM_153485	exon3	c.A386G	p.E129G	.	.	164	5	67	0	.	205
NUP85	79902	bcgsc.ca	37	17	73228985	73228985	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	NUP85	NM_024844	exon15	c.G1436A	p.R479H	.	.	122	5	46	0	.	205
NUP88	4927	ucsc.edu;bcgsc.ca	37	17	5319994	5319994	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	NUP88	NM_002532	exon2	c.T306C	p.L102L	.	.	43	4	59	0	.	204
OCM2	4951	bcgsc.ca	37	7	97619358	97619358	+	Missense_Mutation	SNP	T	T	C	rs13312633		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_006188	exon1	c.A59G	p.Q20R	.	.	153	6	45	0	T|1.000;|0.000	.
OGDHL	55753	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	50947868	50947868	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	OGDHL	NM_018245	exon17	c.G2158T	p.A720S	.	.	67	29	33	0	.	69
OGT	8473	bcgsc.ca	37	X	70793522	70793522	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	OGT	NM_181672	exon22	c.T3019C	p.F1007L	.	.	191	6	63	0	.	113
OR10G2	26534	ucsc.edu	37	14	22102592	22102592	+	Missense_Mutation	SNP	T	T	C	rs10138694	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	OR10G2	NM_001005466	exon1	c.A407G	p.H136R	.	.	137	27	54	2	T|0.629;C|0.371	69
OR1C1	26188	broad.mit.edu	37	1	247921607	247921607	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	OR1C1	NM_012353	exon1	c.G102A	p.M34I	.	.	318	7	90	0	.	91
OR1S2	219958	broad.mit.edu	37	11	57970967	57970967	+	Silent	SNP	G	G	A	rs138762515	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	OR1S2	NM_001004459	exon1	c.C687T	p.F229F	.	.	147	8	59	0	G|0.999;A|0.001	69
OR2L3	391192	ucsc.edu;bcgsc.ca	37	1	248224489	248224489	+	Missense_Mutation	SNP	A	A	G	rs56834114	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	OR2L3	NM_001004687	exon1	c.A506G	p.Q169R	.	.	406	190	103	2	A|0.720;G|0.280	68
OR2L8	391190	mdanderson.org	37	1	248112546	248112546	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	OR2L8	NM_001001963	exon1	c.C387T	p.L129L	.	.	596	82	124	2	.	70
OR2T27	403239	ucsc.edu	37	1	248813827	248813827	+	Missense_Mutation	SNP	T	T	C	rs61834488	bycluster;byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	OR2T27	NM_001001824	exon1	c.A359G	p.Y120C	.	.	337	221	96	42	T|0.333;C|0.667	47
OR52K2	119774	bcgsc.ca	37	11	4470894	4470894	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	OR52K2	NM_001005172	exon1	c.T325C	p.F109L	.	.	153	5	68	0	.	70
OR6B3	150681	ucsc.edu	37	2	240985347	240985347	+	Missense_Mutation	SNP	G	G	A	rs61730684	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	OR6B3	NM_173351	exon1	c.C143T	p.T48I	.	.	211	58	79	11	G|0.122;A|0.878	68
OS9	10956	bcgsc.ca	37	12	58112029	58112029	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	OS9	NM_001261420	exon11	c.A1238G	p.E413G	.	.	121	7	68	4	.	493
PAFAH2	5051	bcgsc.ca	37	1	26303217	26303217	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PAFAH2	NM_000437	exon8	c.A714G	p.G238G	.	.	80	5	40	0	.	70
PAM	5066	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	102203011	102203011	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PAM	NM_138822	exon2	c.T124A	p.C42S	.	.	237	66	78	0	.	68
PARD3B	117583	bcgsc.ca	37	2	205986313	205986313	+	Splice_Site	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PARD3B	NM_057177	exon8	c.807-2A>G	.	.	.	88	4	50	0	.	140
PBRM1	55193	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	3	52662939	52662939	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PBRM1	NM_018313	exon13	c.C1414T	p.R472X	.	.	104	60	79	0	.	575
PCDHA9	9752	ucsc.edu	37	5	140228410	140228410	+	Silent	SNP	A	A	G	rs17844322		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PCDHA9	NM_031857	exon1	c.A330G	p.V110V	.	.	149	66	60	3	A|0.821;G|0.179	138
PCDHA9	9752	ucsc.edu	37	5	140228413	140228413	+	Missense_Mutation	SNP	C	C	A	rs17844323		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PCDHA9	NM_031857	exon1	c.C333A	p.D111E	.	.	166	76	63	5	C|0.819;A|0.181	138
PCDHGC5	56097	hgsc.bcm.edu;mdanderson.org	37	5	140871440	140871440	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PCDHGC5	NM_032407	exon1	c.A2633T	p.D878V	.	.	141	28	40	0	.	25
PCM1	5108	bcgsc.ca	37	8	17871545	17871545	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PCM1	NM_006197	exon35	c.A5584G	p.N1862D	.	.	232	7	106	0	.	742
PCSK5	5125	bcgsc.ca	37	9	78722173	78722173	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PCSK5	NM_006200	exon9	c.A1114G	p.T372A	.	.	49	4	36	0	.	93
PDE4DIP	9659	bcgsc.ca	37	1	144854537	144854537	+	Silent	SNP	T	T	C	rs3851872	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PDE4DIP	NM_014644	exon42	c.A6933G	p.E2311E	.	.	604	106	129	6	T|0.963;C|0.037	663
PDE4DIP	9659	broad.mit.edu;bcgsc.ca	37	1	144915562	144915562	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PDE4DIP	NM_001002811	exon10	c.G2352A	p.Q784Q	.	.	532	59	136	1	.	663
PDLIM3	27295	bcgsc.ca	37	4	186436044	186436044	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PDLIM3	NM_001114107	exon4	c.G331A	p.E111K	.	.	87	4	49	0	.	92
PDP1	54704	broad.mit.edu	37	8	94934400	94934400	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PDP1	NM_001161780	exon3	c.A188G	p.Y63C	.	.	288	7	129	0	.	229
PEAK1	0	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	15	77425574	77425574	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_024776	exon7	c.G3850T	p.E1284X	.	.	234	85	103	0	.	.
PEG10	23089	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	94293700	94293700	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	PEG10,brain,glioma,-1	PEG10	NM_001172438	exon2	c.C1060T	p.R354C	.	.	50	18	16	0	.	23
PEG3	5178	bcgsc.ca	37	19	57325685	57325685	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PEG3	NM_001146184	exon9	c.A4125G	p.E1375E	.	.	157	6	68	0	.	164
PHF10	55274	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	170105298	170105298	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PHF10	NM_018288	exon11	c.A1342G	p.M448V	.	.	160	54	81	0	.	226
PHKB	5257	bcgsc.ca	37	16	47732414	47732414	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PHKB	NM_000293	exon30	c.A3059G	p.D1020G	.	.	177	6	71	0	.	154
PHLPP2	23035	ucsc.edu;bcgsc.ca	37	16	71703179	71703179	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PHLPP2	NM_015020	exon10	c.A1627G	p.R543G	.	.	35	4	33	0	.	91
PIBF1	10464	bcgsc.ca	37	13	73428249	73428249	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PIBF1	NM_006346	exon10	c.G1278A	p.M426I	.	.	68	4	46	0	.	136
PIGN	23556	bcgsc.ca	37	18	59768386	59768386	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PIGN	NM_176787	exon22	c.G1999A	p.V667M	.	.	76	4	34	0	.	227
PIK3C2G	5288	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	18534747	18534747	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PIK3C2G	NM_004570	exon13	c.A1805T	p.E602V	.	.	120	51	60	0	.	1312
PITPNM2	57605	bcgsc.ca	37	12	123477058	123477058	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PITPNM2	NM_020845	exon15	c.T2392C	p.S798P	.	.	71	5	33	0	.	228
PKHD1L1	93035	bcgsc.ca	37	8	110465087	110465087	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PKHD1L1	NM_177531	exon43	c.A6648G	p.K2216K	.	.	95	4	66	0	.	145
PLAU	5328	bcgsc.ca	37	10	75672025	75672025	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PLAU	NM_002658	exon4	c.C138T	p.S46S	.	.	77	5	49	0	.	118
PLCB4	5332	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	9319627	9319627	+	Silent	SNP	A	A	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PLCB4	NM_182797	exon5	c.A312C	p.T104T	.	.	126	42	60	2	.	274
PLEKHA5	54477	bcgsc.ca	37	12	19501372	19501372	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PLEKHA5	NM_001256470	exon25	c.A2938G	p.T980A	.	.	115	5	77	0	.	227
PLIN4	729359	bcgsc.ca	37	19	4511575	4511575	+	Silent	SNP	C	C	G	rs62115185	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PLIN4	NM_001080400	exon3	c.G2355C	p.V785V	.	.	359	91	104	3	C|0.978;G|0.022	68
PMEL	6490	bcgsc.ca	37	12	56351741	56351741	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PMEL	NM_001200054	exon5	c.T597C	p.P199P	.	.	88	5	44	0	.	92
POLG	5428	bcgsc.ca	37	15	89864395	89864395	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	POLG	NM_002693	exon17	c.G2695A	p.A899T	.	.	70	5	33	0	.	228
POLR2J4	84820	broad.mit.edu;bcgsc.ca	37	7	44005987	44005987	+	RNA	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	.	.	.	.	.	.	374	10	122	0	.	.
POLR3D	661	bcgsc.ca	37	8	22106766	22106766	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	POLR3D	NM_001722	exon7	c.A865G	p.T289A	.	.	171	6	82	0	.	90
POM121	9883	ucsc.edu	37	7	72413874	72413874	+	Silent	SNP	T	T	C	rs61749860	bycluster	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	POM121	NM_172020	exon11	c.T2547C	p.N849N	.	.	240	73	89	27	T|0.500;C|0.500	226
POTEC	388468	hgsc.bcm.edu	37	18	14543062	14543062	+	Silent	SNP	A	A	G	rs45469106	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	POTEC	NM_001137671	exon1	c.T84C	p.F28F	.	.	555	148	124	0	A|0.500;G|0.500	3
POTEH	23784	ucsc.edu	37	22	16287789	16287789	+	Missense_Mutation	SNP	C	C	G	rs201322170		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	POTEH	NM_001136213	exon1	c.G97C	p.A33P	.	.	727	166	151	0	.	1
PPIAL4G	644591	broad.mit.edu	37	1	143767757	143767757	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_001123068	exon1	c.A92G	p.K31R	.	.	2973	14	177	0	.	.
PPIAL4G	644591	ucsc.edu	37	1	143767643	143767643	+	Missense_Mutation	SNP	T	T	C	rs78862507	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_001123068	exon1	c.A206G	p.H69R	.	.	520	165	102	0	T|0.667;C|0.333	.
PPP1R3A	5506	bcgsc.ca	37	7	113558713	113558713	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PPP1R3A	NM_002711	exon1	c.T339C	p.P113P	.	.	72	4	55	0	.	832
PPP1R3C	5507	bcgsc.ca	37	10	93389747	93389747	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PPP1R3C	NM_005398	exon2	c.T891C	p.A297A	.	.	92	4	48	0	.	658
PPP6C	5537	broad.mit.edu	37	9	127911980	127911980	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PPP6C	NM_001123355	exon8	c.C1001T	p.P334L	.	.	192	5	100	0	.	227
PRAMEF1	65121	ucsc.edu	37	1	12854356	12854356	+	Missense_Mutation	SNP	T	T	C	rs80079739	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PRAMEF1	NM_023013	exon3	c.T580C	p.Y194H	.	.	653	321	160	50	T|0.500;C|0.500	22
PRAMEF1	65121	ucsc.edu	37	1	12855774	12855774	+	Missense_Mutation	SNP	A	A	G	rs75985223	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PRAMEF1	NM_023013	exon4	c.A1054G	p.K352E	.	.	530	101	131	20	A|0.994;C|0.004;G|0.003	22
PRH1	5554	ucsc.edu	37	12	11035274	11035274	+	Missense_Mutation	SNP	G	G	T	rs28607516		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_006250	exon3	c.C124A	p.L42I	.	.	188	54	80	19	G|0.143;T|0.857	.
PROX1	5629	hgsc.bcm.edu	37	1	214171239	214171240	+	Frame_Shift_Ins	INS	-	-	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PROX1	NM_001270616	exon2	c.1361_1362insC	p.G454fs	.	.	148	5	42	0	.	654
PROX2	283571	broad.mit.edu;ucsc.edu;mdanderson.org	37	14	75330524	75330524	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PROX2	NM_001080408	exon1	c.C14A	p.S5Y	.	.	21	9	10	0	.	69
PRX	57716	bcgsc.ca	37	19	40902691	40902691	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PRX	NM_181882	exon7	c.T1568C	p.L523P	.	.	124	20	49	2	.	92
PSG2	5670	mdanderson.org	37	19	43585274	43585274	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PSG2	NM_031246	exon2	c.T189C	p.T63T	.	.	279	16	129	6	.	90
PSMD2	5708	bcgsc.ca	37	3	184020211	184020211	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PSMD2	NM_002808	exon6	c.T758C	p.L253P	.	.	253	8	101	0	.	90
PTGFRN	5738	bcgsc.ca	37	1	117503877	117503877	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PTGFRN	NM_020440	exon5	c.A1226G	p.Q409R	.	.	103	5	60	0	.	91
PTPLAD2	401494	bcgsc.ca	37	9	21026650	21026650	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PTPLAD2	NM_001010915	exon3	c.T215C	p.L72P	.	.	76	5	45	0	.	91
PTPN3	5774	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	9	112200499	112200499	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PTPN3	NM_001145368	exon8	c.A482G	p.Y161C	.	.	35	11	24	0	.	229
PTPRQ	374462	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	12	80998958	80998958	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_001145026	exon24	c.C4214A	p.S1405X	.	.	102	34	63	0	.	.
PWP1	11137	broad.mit.edu	37	12	108104218	108104218	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	PWP1	NM_007062	exon14	c.C1327T	p.P443S	.	.	323	7	136	0	.	90
QRICH2	84074	bcgsc.ca	37	17	74272030	74272030	+	Splice_Site	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	QRICH2	NM_032134	exon19	c.4856-2A>G	.	.	.	129	5	51	0	.	94
QRICH2	84074	bcgsc.ca	37	17	74288508	74288508	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	QRICH2	NM_032134	exon4	c.A1802T	p.D601V	.	.	217	15	89	0	.	94
RAB11FIP3	9727	bcgsc.ca	37	16	476630	476630	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	RAB11FIP3	NM_014700	exon1	c.A624G	p.R208R	.	.	93	5	39	0	.	90
RAG1	5896	bcgsc.ca	37	11	36596691	36596691	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	RAG1	NM_000448	exon2	c.G1837A	p.G613R	.	.	182	8	92	0	.	230
RALGAPA2	57186	bcgsc.ca	37	20	20505481	20505481	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	RALGAPA2	NM_020343	exon29	c.A3755G	p.D1252G	.	.	93	5	63	0	.	24
RAP1GAP2	23108	bcgsc.ca	37	17	2898748	2898748	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	RAP1GAP2	NM_015085	exon13	c.A1032G	p.G344G	.	.	56	4	43	0	.	1
RBM25	58517	bcgsc.ca	37	14	73563651	73563651	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	RBM25	NM_021239	exon7	c.A572G	p.D191G	.	.	229	6	109	0	.	91
RBM25	58517	bcgsc.ca	37	14	73569901	73569901	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	RBM25	NM_021239	exon10	c.A869G	p.K290R	.	.	95	6	62	0	.	91
RBM4	5936	bcgsc.ca	37	11	66411560	66411560	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	RBM4	NM_002896	exon3	c.A1052G	p.E351G	.	.	55	4	29	0	.	91
REV3L	5980	bcgsc.ca	37	6	111678285	111678285	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	REV3L	NM_002912	exon18	c.A7116G	p.T2372T	.	.	155	5	86	0	.	294
RFPL2	10739	ucsc.edu	37	22	32586854	32586854	+	Missense_Mutation	SNP	C	C	T	rs136467	bycluster;byfrequency;by2hit2allele;by1000genomes	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	RFPL2	NM_001098527	exon5	c.G1042A	p.V348I	.	.	178	40	65	0	C|0.575;T|0.425	91
RFPL2	10739	ucsc.edu	37	22	32586875	32586875	+	Missense_Mutation	SNP	G	G	A	rs136468	bycluster;byfrequency;by2hit2allele;by1000genomes	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	RFPL2	NM_001098527	exon5	c.C1021T	p.R341C	.	.	196	53	79	6	G|0.561;A|0.439	91
RFPL2	10739	ucsc.edu	37	22	32586878	32586878	+	Silent	SNP	A	A	G	rs136469	bycluster;byfrequency;by2hit2allele;by1000genomes	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	RFPL2	NM_001098527	exon5	c.T1018C	p.L340L	.	.	202	55	81	6	A|0.589;G|0.411	91
RFX2	5990	bcgsc.ca	37	19	6004299	6004299	+	Silent	SNP	T	T	C	rs148351969	alternate_allele	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	RFX2	NM_000635	exon13	c.A1413G	p.T471T	.	.	107	5	44	0	T|0.997;G|0.003	156
RFX7	64864	bcgsc.ca	37	15	56386578	56386578	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	RFX7	NM_022841	exon9	c.T3348C	p.T1116T	.	.	83	4	38	0	.	90
RFXAP	5994	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	37399580	37399580	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	RFXAP	NM_000538	exon2	c.A616G	p.I206V	.	.	72	19	35	0	.	91
RHCE	6006	ucsc.edu	37	1	25747230	25747230	+	Missense_Mutation	SNP	G	G	C	rs586178	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	RHCE	NM_138617	exon1	c.C48G	p.C16W	.	.	123	24	49	0	G|0.658;C|0.342	90
RNF43	54894	bcgsc.ca	37	17	56437528	56437528	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	RNF43	NM_017763	exon8	c.T934C	p.C312R	.	.	136	5	54	0	.	92
RP1L1	94137	bcgsc.ca	37	8	10467702	10467702	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	RP1L1	NM_178857	exon4	c.A3906G	p.Q1302Q	.	.	291	56	96	0	.	139
RP1L1	94137	broad.mit.edu;bcgsc.ca	37	8	10467681	10467686	+	In_Frame_Del	DEL	TCCTTC	TCCTTC	-	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	TCCTTC	TCCTTC	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	RP1L1	NM_178857	exon4	c.3922_3927del	p.1308_1309del	.	.	386	0	104	0	.	139
RPS6KL1	83694	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	14	75376302	75376303	+	Frame_Shift_Ins	INS	-	-	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	RPS6KL1	NM_031464	exon7	c.1214_1215insG	p.E405fs	.	.	81	32	35	0	.	359
RPTN	126638	hgsc.bcm.edu	37	1	152128232	152128232	+	Missense_Mutation	SNP	T	T	C	rs200878903		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	RPTN	NM_001122965	exon3	c.A1343G	p.N448S	.	.	1433	63	185	0	.	68
RUFY1	80230	bcgsc.ca	37	5	179032912	179032912	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	RUFY1	NM_025158	exon16	c.A1892G	p.N631S	.	.	104	5	42	0	.	157
RUSC2	9853	bcgsc.ca	37	9	35561251	35561251	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	RUSC2	NM_014806	exon12	c.C4423A	p.R1475R	.	.	84	4	47	0	.	91
RWDD4	201965	bcgsc.ca	37	4	184577104	184577104	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	RWDD4	.	.	.	.	.	.	64	4	49	0	.	91
RXFP2	122042	bcgsc.ca	37	13	32376532	32376532	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	RXFP2	NM_130806	exon18	c.C2255T	p.P752L	.	.	82	5	38	0	.	90
SAMD4A	23034	broad.mit.edu;bcgsc.ca	37	14	55251087	55251087	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SAMD4A	NM_001161577	exon7	c.A847G	p.T283A	.	.	254	8	113	0	.	90
SCIN	85477	bcgsc.ca	37	7	12692257	12692257	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SCIN	NM_001112706	exon16	c.A2065G	p.T689A	.	.	68	4	38	0	.	24
SCNN1G	6340	bcgsc.ca	37	16	23203758	23203758	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SCNN1G	NM_001039	exon4	c.T704C	p.M235T	.	.	176	6	97	0	.	158
SDHAP2	727956	ucsc.edu	37	3	195410687	195410687	+	RNA	SNP	T	T	A	rs6583274	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	.	.	.	.	.	.	1243	164	185	9	T|0.959;A|0.041	.
SDHAP2	727956	ucsc.edu	37	3	195410689	195410689	+	RNA	SNP	C	C	T	rs6583275	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	.	.	.	.	.	.	1251	173	185	12	C|0.979;T|0.021	.
SDR16C5	195814	bcgsc.ca	37	8	57228879	57228879	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SDR16C5	NM_138969	exon2	c.A28G	p.K10E	.	.	75	4	43	0	.	92
SENP3	26168	bcgsc.ca	37	17	7469035	7469035	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SENP3	NM_015670	exon6	c.T1217C	p.V406A	.	.	67	5	65	1	.	659
SERPINA7	6906	bcgsc.ca	37	X	105277635	105277635	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SERPINA7	NM_000354	exon5	c.T1104C	p.P368P	.	.	178	7	53	1	.	226
SHISA9	729993	bcgsc.ca	37	16	13329118	13329118	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_001145204	exon5	c.A1127G	p.Q376R	.	.	46	4	33	0	.	.
SHPRH	257218	bcgsc.ca	37	6	146214418	146214418	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SHPRH	NM_173082	exon28	c.G4819A	p.E1607K	.	.	168	7	86	0	.	92
SIAH1	6477	bcgsc.ca	37	16	48395649	48395649	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SIAH1	NM_001006610	exon2	c.A784G	p.R262G	.	.	170	27	81	1	.	415
SIAH1	6477	bcgsc.ca	37	16	48399349	48399349	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SIAH1	NM_001006610	exon1	c.A40G	p.R14G	.	.	79	4	43	0	.	415
SIAH1	6477	hgsc.bcm.edu;broad.mit.edu	37	16	48395633	48395644	+	In_Frame_Del	DEL	CAAGTCAATCGT	CAAGTCAATCGT	-	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	CAAGTCAATCGT	CAAGTCAATCGT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SIAH1	NM_001006610	exon2	c.789_800del	p.263_267del	.	.	163	12	71	0	.	415
SIPA1L1	26037	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	72190408	72190408	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SIPA1L1	NM_015556	exon16	c.G4316A	p.S1439N	.	.	124	41	68	0	.	156
SIPA1L2	57568	broad.mit.edu	37	1	232575141	232575141	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SIPA1L2	NM_020808	exon13	c.G3744A	p.M1248I	.	.	407	6	84	0	.	95
SKIV2L2	23517	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	54635850	54635850	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SKIV2L2	NM_015360	exon6	c.A528G	p.A176A	.	.	198	108	71	0	.	92
SLC16A14	151473	bcgsc.ca	37	2	230911109	230911109	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SLC16A14	NM_152527	exon4	c.A733G	p.R245G	.	.	197	6	94	0	.	96
SLC22A11	55867	bcgsc.ca	37	11	64338510	64338510	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SLC22A11	NM_018484	exon10	c.T1649C	p.L550P	.	.	88	5	35	0	.	91
SLC25A19	60386	bcgsc.ca	37	17	73279668	73279668	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SLC25A19	NM_001126122	exon4	c.T295C	p.S99P	.	.	81	4	38	0	.	91
SLC25A25	114789	bcgsc.ca	37	9	130854329	130854329	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SLC25A25	NM_001006642	exon1	c.C180T	p.T60T	.	.	141	5	66	0	.	90
SLC27A2	11001	bcgsc.ca	37	15	50518259	50518259	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SLC27A2	NM_003645	exon6	c.C1242T	p.C414C	.	.	165	6	88	0	.	92
SLC27A3	11000	bcgsc.ca	37	1	153749144	153749144	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SLC27A3	NM_024330	exon2	c.T959C	p.L320P	.	.	257	9	59	1	.	91
SLC2A14	144195	ucsc.edu	37	12	7966975	7966975	+	Silent	SNP	C	C	T	rs71436622		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SLC2A14	NM_153449	exon12	c.G1500A	p.G500G	.	.	237	50	99	17	T|1.000;|0.000	91
SLC2A14	144195	ucsc.edu	37	12	7967071	7967071	+	Silent	SNP	G	G	A	rs78504893		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SLC2A14	NM_153449	exon12	c.C1404T	p.A468A	.	.	98	41	47	1	.	91
SLC2A3	6515	ucsc.edu	37	12	8082367	8082367	+	Silent	SNP	T	T	C	rs17847967	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SLC2A3	NM_006931	exon6	c.A774G	p.L258L	.	.	615	97	152	0	T|0.846;C|0.154	94
SLC2A5	6518	bcgsc.ca	37	1	9098016	9098016	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SLC2A5	NM_003039	exon11	c.G1242A	p.V414V	.	.	124	6	44	0	.	517
SLC9B1	150159	broad.mit.edu	37	4	103826788	103826788	+	Silent	SNP	T	T	C	rs75429882	alternate_allele	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_001100874	exon11	c.A1215G	p.L405L	.	.	360	42	136	0	.	.
SLITRK1	114798	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	84454266	84454266	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SLITRK1	NM_052910	exon1	c.C1377T	p.I459I	.	.	153	51	65	0	.	94
SON	6651	bcgsc.ca	37	21	34926373	34926373	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SON	NM_032195	exon3	c.T4836C	p.I1612I	.	.	56	4	39	0	.	97
SON	6651	ucsc.edu	37	21	34923319	34923319	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SON	NM_032195	exon3	c.A1782G	p.L594L	.	.	177	4	60	0	.	97
SPATA3	130560	bcgsc.ca	37	2	231861057	231861057	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_139073	exon1	c.C109T	p.P37S	.	.	96	7	30	0	.	.
SPDYE1	285955	bcgsc.ca	37	7	44046934	44046934	+	Missense_Mutation	SNP	G	G	A	rs200388629	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	SPDYE1,NS,carcinoma,-2	SPDYE1	NM_175064	exon5	c.G700A	p.G234R	.	.	376	17	127	1	G|0.981;A|0.019	91
SPIN2B	474343	broad.mit.edu	37	X	57146319	57146319	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SPIN2B	NM_001006683	exon2	c.T744C	p.H248H	.	.	799	9	160	0	.	90
SPINK5	11005	bcgsc.ca	37	5	147477486	147477486	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SPINK5	NM_001127699	exon11	c.A939G	p.R313R	.	.	156	5	55	0	.	138
SPTBN5	51332	ucsc.edu;bcgsc.ca	37	15	42154364	42154364	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SPTBN5	NM_016642	exon44	c.A7407G	p.E2469E	.	.	63	5	35	0	.	91
SQRDL	58472	bcgsc.ca	37	15	45965877	45965877	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SQRDL	NM_021199	exon5	c.A532G	p.T178A	.	.	106	5	70	0	.	91
SRCRB4D	136853	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	7	76029847	76029847	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SRCRB4D	NM_080744	exon4	c.C231A	p.G77G	.	.	45	18	14	0	.	91
SRP54	6729	bcgsc.ca	37	14	35470162	35470162	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SRP54	NM_003136	exon4	c.A191G	p.E64G	.	.	142	6	72	0	.	227
SSC5D	284297	hgsc.bcm.edu	37	19	56029616	56029616	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_001144950	exon14	c.C3973A	p.P1325T	.	.	154	7	29	0	.	.
SSC5D	284297	hgsc.bcm.edu	37	19	56029619	56029620	+	Frame_Shift_Ins	INS	-	-	C	rs72530655	alternate_allele	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_001144950	exon14	c.3976_3977insC	p.T1326fs	.	.	159	23	32	0	.	.
ST6GALNAC6	30815	bcgsc.ca	37	9	130653145	130653145	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ST6GALNAC6	NM_013443	exon5	c.T475C	p.S159P	.	.	134	6	58	0	.	90
STAC	6769	bcgsc.ca	37	3	36570449	36570449	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	STAC	NM_003149	exon10	c.A1082G	p.Q361R	.	.	83	4	48	0	.	94
STK4	6789	bcgsc.ca	37	20	43653672	43653672	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	STK4	NM_006282	exon10	c.A1206G	p.K402K	.	.	58	4	36	0	.	767
SUN3	256979	bcgsc.ca	37	7	48028392	48028392	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SUN3	NM_152782	exon10	c.A947G	p.E316G	.	.	72	4	44	0	.	514
SYNE1	23345	bcgsc.ca	37	6	152777062	152777062	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SYNE1	NM_033071	exon23	c.A2707G	p.R903G	.	.	162	5	76	0	.	607
SYNE2	23224	bcgsc.ca	37	14	64494415	64494415	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SYNE2	NM_182914	exon43	c.A6618G	p.G2206G	.	.	161	6	75	0	.	164
SYNGR1	9145	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	39777778	39777778	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	SYNGR1	NM_004711	exon4	c.C561A	p.D187E	.	.	97	36	27	0	.	90
TACC2	10579	bcgsc.ca	37	10	123987378	123987378	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TACC2	NM_206862	exon14	c.T7751C	p.L2584P	.	.	66	4	47	0	.	296
TAF15	8148	bcgsc.ca	37	17	34171827	34171827	+	Silent	SNP	C	C	T	rs4251786	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TAF15	NM_139215	exon15	c.C1524T	p.Y508Y	.	.	173	10	46	0	C|0.917;T|0.083	723
TAF7L	54457	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	100547906	100547906	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TAF7L	NM_024885	exon1	c.A128T	p.Y43F	.	.	236	213	69	0	.	130
TBC1D10A	83874	hgsc.bcm.edu	37	22	30688449	30688463	+	In_Frame_Del	DEL	GGGGCTGAGTCCTTG	GGGGCTGAGTCCTTG	-	rs36125665	alternate_allele	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	GGGGCTGAGTCCTTG	GGGGCTGAGTCCTTG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TBC1D10A	NM_001204240	exon9	c.1449_1463del	p.483_488del	.	.	78	4	29	0	.	91
TBCK	93627	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	107092414	107092414	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TBCK	NM_001163436	exon23	c.A2073G	p.E691E	.	.	255	96	112	0	.	336
TBL1Y	90665	bcgsc.ca	37	Y	6893142	6893142	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_134258	exon5	c.A17G	p.D6G	.	.	353	8	139	1	.	.
TCEA1	6917	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	54912542	54912542	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TCEA1	NM_006756	exon3	c.G195T	p.L65F	.	.	393	141	151	0	.	661
TCEAL3	85012	mdanderson.org	37	X	102864334	102864334	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TCEAL3	NM_001006933	exon3	c.G342A	p.T114T	.	.	519	35	109	0	.	90
TCHH	7062	bcgsc.ca	37	1	152083818	152083820	+	In_Frame_Del	DEL	CGG	CGG	-	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	CGG	CGG	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TCHH	NM_007113	exon3	c.1873_1875del	p.625_625del	.	.	482	70	106	0	.	72
TCHH	7062	ucsc.edu	37	1	152084175	152084175	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TCHH	NM_007113	exon3	c.A1518G	p.Q506Q	.	.	342	64	48	5	.	72
TCP10	6953	ucsc.edu	37	6	167786750	167786750	+	Missense_Mutation	SNP	C	C	A	rs3010584	by2hit2allele	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TCP10	NM_004610	exon8	c.G888T	p.K296N	.	.	247	64	108	10	.	89
TGFBR1	7046	bcgsc.ca	37	9	101900201	101900201	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TGFBR1	NM_004612	exon4	c.G635A	p.G212D	.	.	201	6	71	0	.	954
THOC5	8563	bcgsc.ca	37	22	29917060	29917060	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	THOC5	NM_001002878	exon14	c.A1204G	p.S402G	.	.	86	5	45	0	.	585
THSD7B	80731	bcgsc.ca	37	2	137814595	137814595	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	THSD7B	.	.	.	.	.	.	104	5	62	0	.	75
THUMPD2	80745	bcgsc.ca	37	2	39964123	39964123	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	THUMPD2	NM_025264	exon10	c.A1264G	p.S422G	.	.	218	6	106	0	.	91
TMEM131	23505	bcgsc.ca	37	2	98422120	98422120	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TMEM131	NM_015348	exon20	c.A2102G	p.Q701R	.	.	171	6	98	0	.	74
TMEM247	388946	bcgsc.ca	37	2	46707808	46707808	+	Missense_Mutation	SNP	C	C	G	rs74318890		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_001145051	exon2	c.C382G	p.Q128E	.	.	97	12	31	1	G|1.000;|0.000	.
TMEM25	84866	bcgsc.ca	37	11	118404259	118404259	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TMEM25	NM_032780	exon5	c.A798G	p.K266K	.	.	63	5	37	0	.	90
TMEM44	93109	bcgsc.ca	37	3	194337840	194337840	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TMEM44	NM_001166305	exon7	c.A912G	p.A304A	.	.	130	6	54	0	.	90
TMTC3	160418	bcgsc.ca	37	12	88548070	88548070	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TMTC3	NM_181783	exon4	c.A414G	p.T138T	.	.	151	6	87	0	.	91
TNXB	7148	bcgsc.ca	37	6	32049931	32049931	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TNXB	NM_019105	exon9	c.A3618G	p.E1206E	.	.	80	4	31	0	.	90
TOP3A	7156	bcgsc.ca	37	17	18193978	18193978	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TOP3A	NM_004618	exon13	c.G1490A	p.G497E	.	.	62	4	34	0	.	228
TRAPPC11	60684	bcgsc.ca	37	4	184605126	184605126	+	Splice_Site	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_199053	exon12	c.1208-2A>G	.	.	.	177	6	100	0	.	.
TRAPPC8	22878	broad.mit.edu;bcgsc.ca;mdanderson.org	37	18	29426694	29426694	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TRAPPC8	NM_014939	exon26	c.A3822G	p.S1274S	.	.	135	10	81	1	.	159
TRDN	10345	bcgsc.ca	37	6	123696763	123696763	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TRDN	NM_001251987	exon19	c.A1263G	p.K421K	.	.	169	7	96	0	.	91
TREH	11181	bcgsc.ca	37	11	118532406	118532406	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TREH	.	.	.	.	.	.	51	4	34	0	.	46
TRIM46	80128	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	155151089	155151089	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TRIM46	NM_025058	exon7	c.G1285T	p.V429L	.	.	81	19	22	0	.	228
TRIOBP	11078	ucsc.edu;bcgsc.ca	37	22	38120429	38120429	+	Silent	SNP	T	T	C	rs6000868	bycluster;byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TRIOBP	NM_001039141	exon7	c.T1866C	p.D622D	.	.	317	56	119	3	T|0.625;C|0.375	136
TRMT1L	81627	bcgsc.ca	37	1	185119617	185119617	+	Silent	SNP	T	T	C	rs139038962	alternate_allele	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TRMT1L	NM_030934	exon3	c.A354G	p.R118R	.	.	132	7	44	0	T|1.000;A|0.000	92
TRPC7	57113	bcgsc.ca	37	5	135549145	135549145	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_020389	exon12	c.T2567C	p.V856A	.	.	377	9	108	0	.	.
TRPV3	162514	ucsc.edu;bcgsc.ca	37	17	3427525	3427525	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TRPV3	NM_001258205	exon13	c.G1710A	p.Q570Q	.	.	40	5	28	0	.	94
TSHZ2	128553	bcgsc.ca	37	20	51870286	51870286	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TSHZ2	NM_173485	exon2	c.A289G	p.S97G	.	.	77	4	36	0	.	232
TTC39B	158219	bcgsc.ca	37	9	15182389	15182389	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TTC39B	NM_152574	exon17	c.T1639C	p.F547L	.	.	86	4	55	0	.	187
TUBA3E	112714	ucsc.edu	37	2	130949553	130949553	+	Missense_Mutation	SNP	A	A	G	rs1052422	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TUBA3E	NM_207312	exon5	c.T1204C	p.W402R	.	.	142	40	53	8	A|0.657;G|0.343	69
TUBA3E	112714	ucsc.edu	37	2	130952038	130952038	+	Missense_Mutation	SNP	G	G	A	rs13000721	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TUBA3E	NM_207312	exon4	c.C377T	p.A126V	.	.	246	68	72	13	G|0.676;A|0.324	69
TUBA3E	112714	ucsc.edu	37	2	130952718	130952718	+	Silent	SNP	G	G	A	rs3853852	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TUBA3E	NM_207312	exon3	c.C309T	p.Y103Y	.	.	295	87	114	20	G|0.637;A|0.363	69
TUBA3E	112714	ucsc.edu	37	2	130952725	130952725	+	Missense_Mutation	SNP	C	C	T	rs74378236	byfrequency	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TUBA3E	NM_207312	exon3	c.G302A	p.S101N	.	.	276	71	111	21	C|0.500;T|0.500	69
TXNL1	9352	bcgsc.ca	37	18	54278295	54278295	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TXNL1	NM_004786	exon7	c.A769G	p.T257A	.	.	235	6	121	0	.	90
TYMS	7298	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	18	671451	671451	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TYMS	NM_001071	exon6	c.G804A	p.Q268Q	.	.	151	57	72	0	.	227
TYW1	55253	ucsc.edu	37	7	66660242	66660242	+	Missense_Mutation	SNP	A	A	G	rs71563185		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TYW1	NM_018264	exon15	c.A1895G	p.H632R	.	.	168	34	75	4	A|0.500;G|0.500	91
TYW1	55253	ucsc.edu	37	7	66660247	66660247	+	Silent	SNP	T	T	C	rs71563186		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	TYW1	NM_018264	exon15	c.T1900C	p.L634L	.	.	172	31	74	2	T|0.500;C|0.500	91
UBE2D2	7322	broad.mit.edu	37	5	138994447	138994447	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	UBE2D2	NM_003339	exon5	c.T200C	p.V67A	.	.	524	10	135	0	.	226
UGGT1	56886	bcgsc.ca	37	2	128855045	128855045	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	UGGT1	NM_020120	exon2	c.T101C	p.L34P	.	.	155	6	74	0	.	91
UGT2B7	7364	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	4	69962823	69962825	+	In_Frame_Del	DEL	TGT	TGT	-	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	TGT	TGT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	UGT2B7	NM_001074	exon1	c.585_587del	p.195_196del	.	.	305	88	105	0	.	92
UPK3BL	100134938	broad.mit.edu	37	7	102279601	102279601	+	Silent	SNP	G	G	T	rs79054498		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_001114403	exon4	c.C531A	p.T177T	.	.	619	11	151	0	G|0.500;T|0.500	.
USP34	9736	bcgsc.ca	37	2	61528242	61528242	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	USP34	NM_014709	exon29	c.T3972C	p.V1324V	.	.	184	7	87	0	.	579
USP34	9736	bcgsc.ca	37	2	61538978	61538978	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	USP34	NM_014709	exon26	c.A3610G	p.S1204G	.	.	93	5	28	0	.	579
USP49	25862	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	6	41773689	41773689	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	USP49	NM_018561	exon4	c.A1033C	p.I345L	.	.	34	13	15	0	.	523
UTP20	27340	bcgsc.ca	37	12	101686953	101686953	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	UTP20	NM_014503	exon11	c.A1181G	p.E394G	.	.	83	4	59	0	.	155
UTRN	7402	bcgsc.ca	37	6	145021357	145021357	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	UTRN	NM_007124	exon52	c.A7787G	p.Q2596R	.	.	76	4	30	0	.	95
VPS41	27072	bcgsc.ca	37	7	38796517	38796517	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	VPS41	NM_014396	exon19	c.T1616C	p.V539A	.	.	73	4	57	0	.	93
VPS4B	9525	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	18	61067824	61067824	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	VPS4B	NM_004869	exon6	c.A597G	p.I199M	.	.	211	88	99	0	.	91
VPS54	51542	bcgsc.ca	37	2	64176183	64176183	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	VPS54	NM_016516	exon8	c.A1125G	p.Q375Q	.	.	143	5	80	0	.	90
WSCD2	9671	bcgsc.ca	37	12	108589846	108589846	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	WSCD2	NM_014653	exon2	c.A237G	p.T79T	.	.	102	6	45	0	.	136
WWP1	11059	bcgsc.ca	37	8	87464839	87464839	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	WWP1	NM_007013	exon21	c.T2325C	p.A775A	.	.	203	6	97	0	.	659
XIRP2	129446	bcgsc.ca	37	2	168107324	168107324	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	XIRP2	NM_152381	exon9	c.T9422C	p.L3141P	.	.	74	4	50	0	.	104
XKR4	114786	bcgsc.ca	37	8	56436576	56436576	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	XKR4	NM_052898	exon3	c.C1743T	p.S581S	.	.	188	6	79	0	.	92
XPO7	23039	bcgsc.ca	37	8	21853064	21853064	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	XPO7	NM_015024	exon21	c.T2299C	p.C767R	.	.	89	4	60	0	.	273
YPEL5	51646	bcgsc.ca	37	2	30381695	30381695	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	YPEL5	NM_001127400	exon4	c.T352C	p.S118P	.	.	61	4	36	0	.	90
ZBTB14	7541	bcgsc.ca	37	18	5291678	5291678	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_001243702	exon4	c.A529G	p.T177A	.	.	206	6	102	1	.	.
ZFYVE26	23503	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	68274238	68274238	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ZFYVE26	NM_015346	exon5	c.C763T	p.R255W	.	.	64	21	38	0	.	162
ZMYND11	10771	bcgsc.ca	37	10	294299	294299	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ZMYND11	NM_006624	exon13	c.A1251G	p.A417A	.	.	84	4	52	1	.	90
ZNF107	51427	bcgsc.ca	37	7	64167581	64167581	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ZNF107	NM_016220	exon7	c.A899G	p.N300S	.	.	92	4	46	0	.	69
ZNF114	163071	bcgsc.ca	37	19	48789155	48789155	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ZNF114	NM_153608	exon5	c.T274C	p.C92R	.	.	59	4	38	0	.	90
ZNF215	7762	bcgsc.ca	37	11	6977705	6977705	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ZNF215	NM_013250	exon7	c.C1497A	p.F499L	.	.	60	4	38	0	.	514
ZNF223	7766	bcgsc.ca	37	19	44571157	44571157	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ZNF223	NM_013361	exon5	c.A1176G	p.R392R	.	.	66	4	41	0	.	91
ZNF302	55900	ucsc.edu	37	19	35175592	35175592	+	Missense_Mutation	SNP	G	G	A	rs78654759		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_018443	exon5	c.G650A	p.S217N	.	.	115	41	52	5	G|0.500;A|0.500	.
ZNF333	84449	bcgsc.ca	37	19	14829538	14829538	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ZNF333	NM_032433	exon12	c.A1399G	p.S467G	.	.	76	4	43	0	.	92
ZNF396	252884	bcgsc.ca	37	18	32949362	32949362	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ZNF396	NM_145756	exon4	c.A825G	p.G275G	.	.	217	6	118	0	.	90
ZNF420	147923	bcgsc.ca	37	19	37619068	37619068	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ZNF420	NM_144689	exon5	c.A1175G	p.E392G	.	.	85	5	58	0	.	90
ZNF432	9668	bcgsc.ca	37	19	52538298	52538298	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ZNF432	NM_014650	exon5	c.A634G	p.K212E	.	.	93	4	71	0	.	154
ZNF441	126068	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	11888443	11888443	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ZNF441	NM_152355	exon2	c.G21A	p.E7E	.	.	223	78	104	0	.	69
ZNF479	90827	ucsc.edu	37	7	57187745	57187745	+	Missense_Mutation	SNP	A	A	T	rs13235706	bycluster;alternate_allele	TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ZNF479	NM_033273	exon5	c.T1377A	p.H459Q	.	.	201	56	97	24	A|0.500;G|0.500	72
ZNF490	57474	bcgsc.ca	37	19	12691340	12691340	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ZNF490	NM_020714	exon5	c.T1549C	p.L517L	.	.	100	5	77	0	.	90
ZNF598	90850	bcgsc.ca	37	16	2053704	2053704	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ZNF598	NM_178167	exon4	c.C248T	p.A83V	.	.	165	6	67	0	.	432
ZNF623	9831	bcgsc.ca	37	8	144732161	144732161	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ZNF623	NM_014789	exon1	c.T119C	p.V40A	.	.	64	5	55	0	.	90
ZNF629	23361	bcgsc.ca	37	16	30793455	30793455	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_001080417	exon3	c.C2194T	p.H732Y	.	.	80	4	50	0	.	.
ZNF672	79894	hgsc.bcm.edu	37	1	249142604	249142604	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ZNF672	NM_024836	exon4	c.C1131T	p.S377S	.	.	30	18	5	0	.	90
ZNF709	163051	bcgsc.ca	37	19	12575566	12575566	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ZNF709	NM_152601	exon4	c.A1170G	p.K390K	.	.	135	7	73	0	.	90
ZNF735	730291	hgsc.bcm.edu;ucsc.edu;mdanderson.org	37	7	63680468	63680468	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_001159524	exon4	c.C1039A	p.H347N	.	.	31	9	22	0	.	.
ZNF747	65988	bcgsc.ca	37	16	30544421	30544421	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ZNF747	NM_023931	exon2	c.T535C	p.W179R	.	.	91	4	54	1	.	90
ZNF76	7629	bcgsc.ca	37	6	35253980	35253980	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ZNF76	NM_003427	exon3	c.A149G	p.Q50R	.	.	122	5	56	0	.	90
ZNF814	730051	hgsc.bcm.edu;broad.mit.edu	37	19	58385546	58385546	+	Missense_Mutation	SNP	G	G	T	rs201682072		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	NM_001144989	exon3	c.C1212A	p.D404E	.	.	371	30	129	0	.	.
ZNFX1	57169	bcgsc.ca	37	20	47882687	47882687	+	Missense_Mutation	SNP	C	C	A	rs78896798		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ZNFX1	NM_021035	exon4	c.G1987T	p.D663Y	.	.	83	4	45	0	.	24
ZSCAN1	284312	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	58565348	58565348	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ZSCAN1	NM_182572	exon6	c.G1156A	p.G386R	.	.	43	10	31	0	.	92
ZSWIM3	140831	bcgsc.ca	37	20	44506544	44506544	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	ZSWIM3	NM_080752	exon2	c.G1347T	p.M449I	.	.	68	5	47	0	.	92
COG3	83548	hgsc.bcm.edu	37	13	46077404	46077405	+	Missense_Mutation	DNP	AA	AA	TT	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	AA	AA	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	.	.	.	p.E505V	.	.	.	.	.	.	.	
MCM2	4171	hgsc.bcm.edu	37	3	127323584	127323585	+	Missense_Mutation	DNP	GC	GC	AT	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	GC	GC	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	.	.	.	p.A124I	.	.	.	.	.	.	.	
CTD-2089O24.1	0	bcgsc.ca	37	5	110284399	110284400	+	RNA	DNP	CT	CT	TC	novel		TCGA-DD-A1EA-01A-11D-A12Z-10	TCGA-DD-A1EA-10A-01D-A12Z-10	CT	CT	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3	ebf27981-4bd7-4636-ad4e-e6153fba6e66	.	.	.	.	.	.	.	.	.	.	.	.	.	
