Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	TranscriptID	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov_SOL	TVarCov_SOL	NTotCov_SOL	NVarCov_SOL	dbSNPPopFreq	COSMIC_Gene_Freq
AASDHPPT	60496	bcgsc.ca	37	11	105950288	105950288	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	AASDHPPT	NM_015423	exon2	c.T278C	p.V93A	.	.	148	5	68	0	.	90
ABCA1	19	bcgsc.ca	37	9	107574884	107574884	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ABCA1	NM_005502	exon28	c.A4021G	p.R1341G	.	.	67	4	39	0	.	1016
ABCB6	10058	bcgsc.ca	37	2	220079803	220079803	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ABCB6	NM_005689	exon6	c.T1156C	p.Y386H	.	.	64	4	37	0	.	153
ABCC1	4363	bcgsc.ca	37	16	16219763	16219763	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ABCC1	NM_004996	exon26	c.A3814G	p.K1272E	.	.	60	6	50	1	.	94
ABCC1	4363	ucsc.edu	37	16	16235044	16235044	+	Missense_Mutation	SNP	A	A	G	rs200511471		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ABCC1	NM_004996	exon31	c.A4502G	p.D1501G	.	.	48	4	24	0	A|0.999;G|0.000	94
ABCG8	64241	broad.mit.edu	37	2	44105020	44105020	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ABCG8	NM_022437	exon13	c.T1990C	p.F664L	.	.	196	6	65	0	.	94
ACOXL	55289	bcgsc.ca	37	2	111551712	111551712	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ACOXL	NM_001142807	exon5	c.A306G	p.R102R	.	.	154	5	60	0	.	90
ADAM21	8747	ucsc.edu	37	14	70925818	70925818	+	Silent	SNP	T	T	C	rs59688260	bycluster;byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ADAM21	NM_003813	exon2	c.T1602C	p.N534N	.	.	103	25	47	0	T|0.233;C|0.767	92
ADAM21P1	145241	broad.mit.edu	37	14	70713742	70713742	+	RNA	SNP	G	G	T	rs78990308		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	.	.	.	343	16	95	0	G|1.000;|0.000	.
ADAM21P1	145241	ucsc.edu	37	14	70714162	70714162	+	RNA	SNP	A	A	G	rs4899340	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	.	.	.	129	42	55	7	A|0.192;G|0.808	.
ADAM28	10863	bcgsc.ca	37	8	24181387	24181387	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ADAM28	NM_014265	exon9	c.T761C	p.M254T	.	.	178	6	90	0	.	228
ADAM33	80332	ucsc.edu;bcgsc.ca	37	20	3655233	3655233	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ADAM33	NM_025220	exon6	c.T518C	p.L173P	.	.	47	5	32	0	.	291
ADH6	130	bcgsc.ca	37	4	100126112	100126112	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ADH6	NM_000672	exon8	c.A1073G	p.E358G	.	.	97	4	58	0	.	228
AGO4	192670	bcgsc.ca	37	1	36319100	36319100	+	Missense_Mutation	SNP	C	C	T	rs189230027		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_017629	exon18	c.C2480T	p.A827V	.	.	95	5	70	0	C|0.999;T|0.000	.
AHCTF1	25909	hgsc.bcm.edu	37	1	247007131	247007131	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	AHCTF1	NM_015446	exon34	c.6518delA	p.N2173fs	.	.	3219	14	198	1	.	97
AKAP11	11215	bcgsc.ca	37	13	42876330	42876330	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	AKAP11	NM_016248	exon8	c.T3448C	p.S1150P	.	.	153	6	58	0	.	227
AKD1	221264	bcgsc.ca	37	6	109871417	109871417	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	AKD1	NM_001145128	exon25	c.A2840G	p.Q947R	.	.	151	6	95	0	.	91
ALG6	29929	bcgsc.ca	37	1	63877004	63877004	+	Splice_Site	SNP	T	T	C	rs146051065	alternate_allele	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ALG6	NM_013339	exon8	c.680+2T>C	.	.	.	77	5	57	0	T|1.000;G|0.000	90
AMOTL2	51421	ucsc.edu	37	3	134090267	134090267	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	AMOTL2	NM_016201	exon2	c.A9G	p.T3T	.	.	40	4	22	0	.	135
AMPD1	270	bcgsc.ca	37	1	115220653	115220653	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	AMPD1	NM_000036	exon9	c.A1201G	p.T401A	.	.	62	4	39	0	.	293
ANAPC1	64682	ucsc.edu	37	2	112605302	112605302	+	Silent	SNP	C	C	T	rs77448997	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ANAPC1	NM_022662	exon15	c.G1791A	p.L597L	.	.	251	70	97	25	C|0.500;T|0.500	228
ANGPTL3	27329	bcgsc.ca	37	1	63068035	63068035	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ANGPTL3	NM_014495	exon5	c.T915C	p.V305V	.	.	68	4	46	0	.	130
ANKRD30BP2	149992	ucsc.edu	37	21	14437963	14437963	+	RNA	SNP	T	T	G	rs75453617		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	.	.	.	55	21	31	5	G|1.000;|0.000	.
ANO2	57101	bcgsc.ca	37	12	5724357	5724357	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ANO2	NM_020373	exon18	c.A1923G	p.K641K	.	.	81	4	44	0	.	139
ANXA2P2	304	bcgsc.ca	37	9	33624792	33624792	+	RNA	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	.	.	.	141	6	61	0	.	.
APOBEC3F	200316	ucsc.edu	37	22	39441096	39441096	+	Missense_Mutation	SNP	G	G	T	rs77279243		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	APOBEC3F	NM_145298	exon3	c.G322T	p.A108S	.	.	210	56	46	9	T|1.000;|0.000	226
AQP7	364	bcgsc.ca	37	9	33386144	33386144	+	Silent	SNP	G	G	A	rs76209395	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	AQP7	NM_001170	exon6	c.C456T	p.V152V	.	.	248	20	76	0	G|0.375;A|0.625	90
AQP7	364	bcgsc.ca	37	9	33386146	33386146	+	Missense_Mutation	SNP	C	C	A	rs76608797	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	AQP7	NM_001170	exon6	c.G454T	p.V152F	.	.	247	23	77	0	C|0.785;A|0.215	90
AQP7	364	bcgsc.ca	37	9	33386430	33386430	+	Silent	SNP	C	C	T	rs74589499		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	AQP7	NM_001170	exon5	c.G378A	p.A126A	.	.	195	28	55	2	C|0.167;T|0.833	90
AQP7	364	bcgsc.ca	37	9	33386465	33386465	+	Missense_Mutation	SNP	A	A	G	rs74668961		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	AQP7	NM_001170	exon5	c.T343C	p.Y115H	.	.	237	46	76	4	A|0.250;G|0.750	90
ARHGAP10	79658	bcgsc.ca	37	4	148985603	148985603	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ARHGAP10	NM_024605	exon22	c.T2217C	p.C739C	.	.	89	6	59	0	.	229
ARHGAP18	93663	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	129927037	129927037	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ARHGAP18	NM_033515	exon10	c.C1350T	p.N450N	.	.	89	65	68	0	.	230
ARHGAP29	9411	bcgsc.ca	37	1	94650589	94650589	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ARHGAP29	NM_004815	exon18	c.T1948C	p.L650L	.	.	67	4	68	0	.	296
ARHGAP9	64333	bcgsc.ca	37	12	57868658	57868658	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ARHGAP9	NM_001080157	exon12	c.G1651A	p.G551S	.	.	70	4	36	0	.	651
ARHGEF17	9828	bcgsc.ca	37	11	73075590	73075590	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ARHGEF17	NM_014786	exon18	c.G5495T	p.W1832L	.	.	114	6	44	0	.	227
ARID1A	8289	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	1	27106893	27106894	+	Frame_Shift_Ins	INS	-	-	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ARID1A	NM_006015	exon20	c.6504_6505insT	p.V2168fs	.	.	73	16	49	0	.	584
ARID1A	8289	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	1	27105550	27105550	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	ARID1A,NS,carcinoma,0	ARID1A	NM_006015	exon20	c.C5161T	p.R1721X	.	.	234	117	122	0	.	584
ASAH2	56624	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	52008360	52008360	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ASAH2	NM_001143974	exon1	c.G11A	p.R4H	.	.	104	37	65	0	.	90
ASAP2	8853	bcgsc.ca	37	2	9517092	9517092	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ASAP2	NM_001135191	exon18	c.T1802C	p.L601P	.	.	63	4	33	0	.	90
ASPM	259266	bcgsc.ca	37	1	197070016	197070016	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ASPM	NM_018136	exon18	c.A8365G	p.S2789G	.	.	298	7	81	0	.	615
ATAD2	29028	bcgsc.ca	37	8	124373816	124373816	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ATAD2	NM_014109	exon9	c.A1120G	p.R374G	.	.	110	5	42	0	.	92
ATMIN	23300	bcgsc.ca	37	16	81077744	81077744	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ATMIN	NM_015251	exon4	c.A1641G	p.L547L	.	.	172	6	105	0	.	68
ATP6	0	broad.mit.edu;bcgsc.ca	37	MT	9182	9182	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	ENST00000361899	exon1	c.G656A	p.S219N	.	.	156	148	25	0	.	.
ATP9B	374868	bcgsc.ca	37	18	77105778	77105778	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ATP9B	NM_198531	exon23	c.A2621G	p.D874G	.	.	159	6	70	0	.	93
AXIN1	8312	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	16	347071	347072	+	Frame_Shift_Ins	INS	-	-	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	AXIN1	NM_003502	exon7	c.1940_1941insC	p.R647fs	.	.	66	49	36	0	.	684
BRD7	29117	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	16	50357576	50357576	+	Nonsense_Mutation	SNP	A	A	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	BRD7	NM_013263	exon12	c.T1365G	p.Y455X	.	.	68	46	55	0	.	90
BUB3	9184	bcgsc.ca	37	10	124922334	124922334	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	BUB3	NM_004725	exon7	c.A961G	p.T321A	.	.	68	4	35	0	.	228
C11orf16	56673	broad.mit.edu;bcgsc.ca	37	11	8947522	8947522	+	Missense_Mutation	SNP	C	C	T	rs148052847		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	C11orf16	NM_020643	exon5	c.G692A	p.R231K	.	.	80	5	43	0	C|1.000;T|0.000	92
C11orf63	79864	bcgsc.ca	37	11	122775109	122775109	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	C11orf63	NM_024806	exon3	c.T821C	p.L274P	.	.	162	5	55	0	.	93
C11orf74	119710	hgsc.bcm.edu	37	11	36669641	36669648	+	Frame_Shift_Del	DEL	AGCCTCCT	AGCCTCCT	-	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	AGCCTCCT	AGCCTCCT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	C11orf74	NM_138787	exon5	c.434_441del	p.145_147del	.	.	74	0	34	0	.	68
C11orf74	119710	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	11	36669639	36669642	+	Frame_Shift_Del	DEL	CCAG	CCAG	-	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	CCAG	CCAG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	C11orf74	NM_138787	exon5	c.432_435del	p.144_145del	.	.	75	14	35	0	.	68
C11orf74	119710	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	11	36669648	36669649	+	Frame_Shift_Ins	INS	-	-	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	C11orf74	NM_138787	exon5	c.441_442insC	p.D147fs	.	.	65	18	30	0	.	68
C17orf47	284083	bcgsc.ca	37	17	56620176	56620176	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	C17orf47	NM_001038704	exon1	c.T1372C	p.L458L	.	.	87	4	55	0	.	135
C6orf170	221322	bcgsc.ca	37	6	121631938	121631938	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	C6orf170	NM_152730	exon4	c.G551T	p.G184V	.	.	62	4	51	0	.	92
C6orf70	55780	bcgsc.ca	37	6	170156834	170156834	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	C6orf70	NM_018341	exon5	c.A437G	p.K146R	.	.	138	5	114	0	.	91
C9orf41	138199	bcgsc.ca	37	9	77632231	77632231	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	C9orf41	NM_152420	exon2	c.A364G	p.I122V	.	.	157	5	59	0	.	92
CACNA1G	8913	bcgsc.ca	37	17	48650015	48650015	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	CACNA1G	NM_001256360	exon6	c.A847G	p.R283G	.	.	59	4	29	0	.	67
CACNA2D4	93589	bcgsc.ca	37	12	1993464	1993464	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	CACNA2D4	NM_172364	exon12	c.T1296C	p.I432I	.	.	83	4	49	0	.	23
CAPN6	827	bcgsc.ca	37	X	110490692	110490692	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	CAPN6	NM_014289	exon12	c.A1647G	p.E549E	.	.	125	6	41	0	.	195
CAPN7	23473	bcgsc.ca	37	3	15259995	15259995	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	CAPN7	NM_014296	exon4	c.G385T	p.D129Y	.	.	67	4	38	0	.	91
CCNT1	904	broad.mit.edu;bcgsc.ca	37	12	49087092	49087092	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	CCNT1	NM_001240	exon9	c.T1905C	p.P635P	.	.	263	10	95	0	.	418
CCT6P1	643253	broad.mit.edu	37	7	65226641	65226641	+	RNA	SNP	G	G	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	.	.	.	287	8	114	0	.	.
CCT8	10694	bcgsc.ca	37	21	30442633	30442633	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	CCT8	NM_006585	exon2	c.T86C	p.V29A	.	.	101	6	45	0	.	90
CD320	51293	ucsc.edu	37	19	8369987	8369987	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	CD320	NM_016579	exon2	c.T196C	p.L66L	.	.	46	4	16	0	.	90
CD55	1604	bcgsc.ca	37	1	207495907	207495907	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	CD55	NM_001114752	exon2	c.G281A	p.C94Y	.	.	207	6	58	0	.	187
CDC27	996	bcgsc.ca	37	17	45234625	45234625	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	CDC27	NM_001114091	exon6	c.G601T	p.V201F	.	.	290	21	104	0	.	291
CDC42BPB	9578	bcgsc.ca	37	14	103404470	103404470	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	CDC42BPB	NM_006035	exon36	c.T4975C	p.S1659P	.	.	72	4	39	0	.	581
CDHR5	53841	bcgsc.ca	37	11	618860	618860	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	CDHR5	NM_021924	exon13	c.A1699G	p.S567G	.	.	493	78	85	2	.	90
CDON	50937	ucsc.edu	37	11	125873968	125873968	+	Missense_Mutation	SNP	C	C	G	rs141081456	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	CDON	NM_016952	exon10	c.G1855C	p.D619H	.	.	40	4	24	0	C|0.999;G|0.001	158
CDRT15P1	94158	broad.mit.edu	37	17	13927814	13927814	+	RNA	SNP	A	A	T	rs141406384	by1000genomes	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	.	.	.	19	4	34	0	A|0.901;T|0.099	.
CEP104	9731	bcgsc.ca	37	1	3739760	3739760	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	CEP104	NM_014704	exon20	c.A2549G	p.E850G	.	.	61	4	51	0	.	92
CERKL	375298	broad.mit.edu;bcgsc.ca	37	2	182409477	182409477	+	Missense_Mutation	SNP	G	G	A	rs139300604	by1000genomes	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	CERKL	NM_001030311	exon12	c.C1393T	p.R465W	.	.	280	8	122	1	G|0.999;A|0.000	228
CFLAR	8837	bcgsc.ca	37	2	202025363	202025363	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	CFLAR	NM_003879	exon9	c.T1002C	p.H334H	.	.	162	6	58	0	.	227
CHAF1A	10036	bcgsc.ca	37	19	4409420	4409420	+	Silent	SNP	G	G	T	rs147234391	alternate_allele	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	CHAF1A	NM_005483	exon3	c.G624T	p.P208P	.	.	70	4	40	0	G|1.000;A|0.000	92
CHST10	9486	bcgsc.ca	37	2	101014403	101014403	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	CHST10	NM_004854	exon5	c.A394G	p.T132A	.	.	109	6	46	0	.	91
CIAPIN1	57019	bcgsc.ca	37	16	57473205	57473205	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	CIAPIN1	NM_020313	exon3	c.T199C	p.L67L	.	.	63	4	45	0	.	90
CKAP5	9793	bcgsc.ca	37	11	46819721	46819721	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	CKAP5	NM_001008938	exon10	c.T1085C	p.V362A	.	.	109	5	40	0	.	92
CNN3	1266	bcgsc.ca	37	1	95363460	95363460	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	CNN3	NM_001839	exon7	c.T828C	p.P276P	.	.	171	6	104	1	.	90
COL12A1	1303	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	75893307	75893307	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	COL12A1	NM_004370	exon10	c.C1350A	p.S450R	.	.	94	58	88	1	.	142
COL25A1	84570	ucsc.edu;bcgsc.ca	37	4	109740482	109740482	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	COL25A1	NM_198721	exon35	c.T1849C	p.F617L	.	.	24	4	20	0	.	92
CRIPAK	285464	hgsc.bcm.edu	37	4	1389206	1389207	+	Frame_Shift_Del	DEL	CA	CA	-	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	CA	CA	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	CRIPAK	NM_175918	exon1	c.907_908del	p.303_303del	.	.	131	10	31	0	.	90
CROCCP2	84809	broad.mit.edu	37	1	16956761	16956761	+	RNA	SNP	C	C	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	.	.	.	22	4	9	0	.	.
CRP	1401	bcgsc.ca	37	1	159683460	159683460	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	CRP	NM_000567	exon2	c.T530C	p.V177A	.	.	215	7	56	0	.	91
CRYGD	1421	hgsc.bcm.edu	37	2	208989044	208989045	+	Frame_Shift_Ins	INS	-	-	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	CRYGD	NM_006891	exon2	c.44_45insC	p.R15fs	.	.	83	13	25	0	.	90
CSMD3	114788	bcgsc.ca	37	8	113933931	113933931	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	CSMD3	NM_198123	exon10	c.G1558A	p.G520S	.	.	94	5	38	0	.	1132
CTSL3P	392360	bcgsc.ca	37	9	90388406	90388406	+	RNA	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	.	.	.	168	6	75	0	.	.
CXXC4	80319	bcgsc.ca	37	4	105412310	105412310	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	CXXC4	NM_025212	exon2	c.T650C	p.L217P	.	.	91	5	50	0	.	227
CYP2B6	1555	ucsc.edu	37	19	41515263	41515263	+	Missense_Mutation	SNP	A	A	G	rs28399497	bycluster;byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	CYP2B6	NM_000767	exon5	c.A785G	p.K262R	.	.	231	80	88	19	A|0.731;G|0.269	92
DCAF5	8816	bcgsc.ca	37	14	69522255	69522255	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	DCAF5	NM_003861	exon9	c.T1148C	p.L383P	.	.	170	6	62	0	.	91
DCDC2B	149069	bcgsc.ca	37	1	32680499	32680499	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_001099434	exon7	c.A816G	p.P272P	.	.	88	5	46	0	.	.
DCSTAMP	81501	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	105361088	105361088	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_001257317	exon2	c.C308A	p.T103K	.	.	222	89	90	0	.	.
DDX11	1663	broad.mit.edu	37	12	31242081	31242081	+	Missense_Mutation	SNP	G	G	A	rs201968272		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	DDX11	NM_030653	exon7	c.G788A	p.R263Q	.	.	470	25	113	1	G|0.994;A|0.006	229
DDX43	55510	bcgsc.ca	37	6	74115472	74115472	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	DDX43	NM_018665	exon6	c.T721C	p.C241R	.	.	76	4	69	0	.	229
DENND5B	160518	bcgsc.ca	37	12	31545250	31545250	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	DENND5B	NM_144973	exon19	c.C3417T	p.F1139F	.	.	85	4	41	0	.	24
DES	1674	bcgsc.ca	37	2	220286256	220286256	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	DES	NM_001927	exon6	c.G1218A	p.R406R	.	.	91	6	32	0	.	514
DHX16	8449	hgsc.bcm.edu	37	6	30621048	30621048	+	Nonsense_Mutation	DEL	T	T	-	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	DHX16	NM_003587	exon20	c.3097delA	p.I1033X	.	.	860	19	147	2	.	228
DIP2A	23181	bcgsc.ca	37	21	47954524	47954524	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	DIP2A	NM_206891	exon13	c.G1566A	p.T522T	.	.	59	4	37	0	.	24
DMD	1756	bcgsc.ca	37	X	32383311	32383311	+	Silent	SNP	A	A	G	rs143719666	byfrequency;alternate_allele	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	DMD	NM_004006	exon35	c.T4851C	p.T1617T	.	.	82	4	44	0	A|1.000;C|0.000	265
DMXL2	23312	bcgsc.ca	37	15	51783915	51783915	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	DMXL2	NM_001174116	exon20	c.T4813C	p.F1605L	.	.	84	4	53	0	.	99
DNAAF2	55172	ucsc.edu	37	14	50101849	50101849	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_018139	exon1	c.T19C	p.S7P	.	.	57	5	21	3	.	.
DNAH10	196385	bcgsc.ca	37	12	124352646	124352646	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	DNAH10	NM_207437	exon42	c.C7145T	p.A2382V	.	.	94	5	39	0	.	95
DONSON	29980	hgsc.bcm.edu	37	21	34956952	34956953	+	Frame_Shift_Ins	INS	-	-	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	DONSON	NM_017613	exon4	c.729_730insG	p.G243fs	.	.	172	11	66	0	.	91
DPY19L4	286148	bcgsc.ca	37	8	95778017	95778017	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	DPY19L4	NM_181787	exon10	c.A1081G	p.T361A	.	.	125	6	79	0	.	92
DSPP	1834	bcgsc.ca	37	4	88536233	88536238	+	In_Frame_Del	DEL	AGTGAT	AGTGAT	-	rs200486992	alternate_allele	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	AGTGAT	AGTGAT	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	DSPP	NM_014208	exon5	c.2419_2424del	p.807_808del	.	.	390	26	122	0	.	90
DSPP	1834	hgsc.bcm.edu	37	4	88536321	88536321	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	DSPP	NM_014208	exon5	c.G2507A	p.S836N	.	.	312	37	109	0	.	90
DSPP	1834	hgsc.bcm.edu	37	4	88536324	88536324	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	DSPP	NM_014208	exon5	c.A2510G	p.N837S	.	.	315	19	112	0	.	90
EBF3	253738	bcgsc.ca	37	10	131760485	131760485	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	EBF3	NM_001005463	exon4	c.A361G	p.R121G	.	.	83	4	36	0	.	91
EFCAB6	64800	bcgsc.ca	37	22	44107469	44107469	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	EFCAB6	NM_022785	exon10	c.T917C	p.L306P	.	.	80	5	41	0	.	97
EIF4G2	1982	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	10821282	10821282	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	EIF4G2	NM_001172705	exon19	c.G2141A	p.R714H	.	.	112	18	55	0	.	91
EIF4G3	8672	bcgsc.ca	37	1	21188758	21188758	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	EIF4G3	NM_001198801	exon21	c.T3014C	p.I1005T	.	.	83	5	54	0	.	91
ELN	2006	hgsc.bcm.edu	37	7	73474235	73474235	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ELN	NM_001081754	exon23	c.C1449T	p.G483G	.	.	612	39	99	0	.	95
ENO3	2027	bcgsc.ca	37	17	4856369	4856369	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ENO3	NM_001976	exon4	c.A205G	p.I69V	.	.	67	4	44	0	.	227
ENOPH1	58478	bcgsc.ca	37	4	83352036	83352036	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ENOPH1	NM_021204	exon1	c.A54G	p.E18E	.	.	103	6	37	0	.	22
ENPEP	2028	bcgsc.ca	37	4	111469420	111469420	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ENPEP	NM_001977	exon14	c.T2089C	p.S697P	.	.	66	4	48	0	.	157
EPM2A	7957	bcgsc.ca	37	6	145956594	145956594	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	EPM2A	NM_005670	exon3	c.T505C	p.C169R	.	.	166	7	91	0	.	415
EPN3	55040	hgsc.bcm.edu;ucsc.edu	37	17	48614425	48614425	+	Missense_Mutation	SNP	C	C	T	rs146173668		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	EPN3	NM_017957	exon2	c.C508T	p.R170C	.	.	44	19	14	0	C|1.000;T|0.000	91
ETFA	2108	bcgsc.ca	37	15	76523712	76523712	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ETFA	NM_000126	exon10	c.G844A	p.G282R	.	.	123	6	71	0	.	90
EXPH5	23086	bcgsc.ca	37	11	108464241	108464241	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	EXPH5	NM_015065	exon1	c.T23C	p.F8S	.	.	149	5	72	0	.	95
EXTL2	2135	bcgsc.ca	37	1	101343253	101343253	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	EXTL2	NM_001261441	exon4	c.A236G	p.Q79R	.	.	90	5	66	0	.	91
FADS6	283985	ucsc.edu	37	17	72889685	72889685	+	Silent	SNP	G	G	A	rs2683274	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	FADS6	NM_178128	exon1	c.C9T	p.P3P	.	.	100	16	27	1	G|0.500;A|0.500	22
FAM155A	728215	hgsc.bcm.edu	37	13	108518715	108518715	+	Missense_Mutation	SNP	C	C	T	rs141699731	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	FAM155A	NM_001080396	exon1	c.G230A	p.R77Q	.	.	18	10	6	0	C|0.985;T|0.015	23
FAM155A	728215	hgsc.bcm.edu	37	13	108518727	108518727	+	Missense_Mutation	SNP	T	T	C	rs80103752	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	FAM155A	NM_001080396	exon1	c.A218G	p.Q73R	.	.	22	12	6	0	T|0.971;C|0.029	23
FAM157A	728262	broad.mit.edu	37	3	197894694	197894694	+	Missense_Mutation	SNP	G	G	A	rs61793575		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_001145248	exon5	c.G1036A	p.A346T	.	.	1007	38	140	0	.	.
FAM175A	84142	broad.mit.edu	37	4	84383790	84383790	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	FAM175A	NM_139076	exon9	c.A1062G	p.R354R	.	.	857	11	161	1	.	205
FAM186A	121006	ucsc.edu;bcgsc.ca	37	12	50745924	50745924	+	Missense_Mutation	SNP	T	T	C	rs34283706		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	FAM186A	NM_001145475	exon4	c.A4691G	p.E1564G	.	.	157	27	46	0	.	68
FAM205A	259308	hgsc.bcm.edu	37	9	34723290	34723291	+	Frame_Shift_Ins	INS	-	-	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_001141917	exon4	c.3947_3948insC	p.R1316fs	.	.	138	8	46	0	.	.
FAM35A	54537	broad.mit.edu	37	10	88911830	88911830	+	Missense_Mutation	SNP	C	C	A	rs3129516		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	FAM35A	NM_019054	exon3	c.C719A	p.T240K	.	.	159	6	86	1	.	94
FAM45B	55855	ucsc.edu	37	10	120897151	120897151	+	RNA	SNP	C	C	T	rs34073025		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	FAM45B	.	.	.	.	.	.	222	72	95	28	.	63
FAM86C2P	645332	bcgsc.ca	37	11	67560715	67560715	+	RNA	SNP	C	C	T	rs184691350		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	.	.	.	695	65	138	4	.	.
FAM86C2P	645332	bcgsc.ca	37	11	67560756	67560756	+	RNA	SNP	C	C	T	rs202203024		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	.	.	.	735	87	138	13	.	.
FANCD2	2177	bcgsc.ca	37	3	10138124	10138124	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	FANCD2	NM_001018115	exon42	c.T4153C	p.W1385R	.	.	90	4	49	0	.	229
FAT2	2196	bcgsc.ca	37	5	150889690	150889690	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	FAT2	NM_001447	exon21	c.A11951G	p.E3984G	.	.	69	4	39	0	.	96
FAT3	120114	bcgsc.ca	37	11	92495083	92495083	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	FAT3	NM_001008781	exon4	c.T3731C	p.V1244A	.	.	151	5	66	0	.	73
FBN2	2201	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	5	127681089	127681089	+	Silent	SNP	A	A	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	FBN2	NM_001999	exon24	c.T3177A	p.A1059A	.	.	93	26	45	0	.	146
FBXL7	23194	bcgsc.ca	37	5	15928547	15928547	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	FBXL7	NM_012304	exon3	c.T676C	p.S226P	.	.	124	5	55	0	.	228
FCGR3B	2215	broad.mit.edu	37	1	161596040	161596040	+	Missense_Mutation	SNP	G	G	A	rs71632958		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	FCGR3B	NM_001244753	exon4	c.C580T	p.H194Y	.	.	975	33	138	1	G|0.500;A|0.500	22
FCRLA	84824	hgsc.bcm.edu	37	1	161681023	161681024	+	Frame_Shift_Ins	INS	-	-	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	FCRLA	NM_001184866	exon4	c.327_328insA	p.A109fs	.	.	126	10	31	0	.	226
FGD5	152273	bcgsc.ca	37	3	14952374	14952374	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	FGD5	NM_152536	exon11	c.C3343A	p.L1115M	.	.	65	4	31	0	.	231
FHOD1	29109	bcgsc.ca	37	16	67264216	67264216	+	Splice_Site	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	FHOD1	NM_013241	exon20	c.3051+1G>A	.	.	.	53	4	35	0	.	221
FRG1	2483	bcgsc.ca	37	4	190878589	190878589	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	FRG1	NM_004477	exon6	c.A469G	p.I157V	.	.	852	28	167	2	.	90
FRG1B	284802	broad.mit.edu	37	20	29625955	29625955	+	RNA	SNP	A	A	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	FRG1B	.	.	.	.	.	.	407	17	86	0	.	22
FRG1B	284802	broad.mit.edu	37	20	29628300	29628300	+	RNA	SNP	G	G	A	rs71229055		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	FRG1B	.	.	.	.	.	.	1486	22	123	2	G|0.500;A|0.500	22
FRG1B	284802	bcgsc.ca	37	20	29628263	29628263	+	RNA	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	FRG1B	.	.	.	.	.	.	3171	120	173	2	.	22
FRG1B	284802	ucsc.edu	37	20	29625935	29625935	+	RNA	SNP	A	A	G	rs62198354	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	FRG1B	.	.	.	.	.	.	307	134	65	0	A|0.417;G|0.583	22
FRG2B	441581	broad.mit.edu	37	10	135439077	135439077	+	Silent	SNP	T	T	C	rs34204891	bycluster;alternate_allele	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_001080998	exon4	c.A363G	p.S121S	.	.	339	31	92	0	C|0.500;A|0.500	.
FRY	10129	bcgsc.ca	37	13	32802622	32802622	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	FRY	NM_023037	exon40	c.T5236C	p.S1746P	.	.	147	5	42	0	.	142
FSD2	123722	bcgsc.ca	37	15	83428166	83428166	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	FSD2	NM_001007122	exon13	c.G2184T	p.L728F	.	.	105	5	56	0	.	90
GABRB2	2561	bcgsc.ca	37	5	160763669	160763669	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	GABRB2	NM_021911	exon7	c.C649T	p.L217F	.	.	46	4	37	0	.	91
GANAB	23193	ucsc.edu	37	11	62394550	62394550	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	GANAB	NM_198335	exon20	c.T2358C	p.G786G	.	.	41	4	19	0	.	94
GANC	2595	bcgsc.ca	37	15	42570790	42570790	+	Splice_Site	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	GANC	NM_198141	exon3	c.201+2T>C	.	.	.	237	7	89	0	.	92
GAPVD1	26130	bcgsc.ca	37	9	128099323	128099323	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	GAPVD1	NM_015635	exon15	c.T2536C	p.S846P	.	.	218	7	77	0	.	93
GBF1	8729	bcgsc.ca	37	10	104120845	104120845	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	GBF1	NM_001199378	exon13	c.A1459G	p.S487G	.	.	136	5	48	0	.	91
GCNT3	9245	bcgsc.ca	37	15	59911495	59911495	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	GCNT3	NM_004751	exon3	c.A1058G	p.D353G	.	.	121	6	50	0	.	91
GMEB2	26205	bcgsc.ca	37	20	62222078	62222078	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	GMEB2	NM_012384	exon10	c.G957T	p.L319L	.	.	131	6	37	0	.	90
GMEB2	26205	broad.mit.edu;bcgsc.ca	37	20	62221645	62221645	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	GMEB2	NM_012384	exon10	c.G1390C	p.D464H	.	.	99	6	41	0	.	90
GMNC	647309	bcgsc.ca	37	3	190578553	190578553	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_001146686	exon2	c.T98C	p.V33A	.	.	146	5	69	0	.	.
GPATCH4	54865	hgsc.bcm.edu	37	1	156565049	156565049	+	Missense_Mutation	SNP	A	A	C	rs77528517	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	GPATCH4	NM_015590	exon8	c.T1084G	p.F362V	.	.	901	5	136	0	A|0.333;C|0.333;G|0.333	91
GPR87	53836	bcgsc.ca	37	3	151017882	151017882	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	GPR87	NM_023915	exon2	c.T7C	p.F3L	.	.	68	4	56	0	.	153
GPR98	84059	bcgsc.ca	37	5	89979411	89979411	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	GPR98	NM_032119	exon28	c.A5673G	p.R1891R	.	.	49	4	36	0	.	103
GRIA1	2890	bcgsc.ca	37	5	153149866	153149866	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	GRIA1	NM_001258021	exon13	c.A2191G	p.T731A	.	.	166	5	72	0	.	96
GRM3	2913	bcgsc.ca	37	7	86468705	86468705	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	GRM3	NM_000840	exon4	c.A1875G	p.S625S	.	.	123	6	53	0	.	528
GUSB	2990	bcgsc.ca	37	7	65432760	65432760	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	GUSB	NM_000181	exon10	c.T1611C	p.I537I	.	.	94	4	40	0	.	90
GYG2	8908	bcgsc.ca	37	X	2793932	2793932	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	GYG2	NM_003918	exon10	c.T1213C	p.F405L	.	.	73	4	33	0	.	132
HAVCR2	84868	bcgsc.ca	37	5	156525901	156525901	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	HAVCR2	NM_032782	exon4	c.A490G	p.T164A	.	.	108	5	52	0	.	90
HBP1	26959	bcgsc.ca	37	7	106827128	106827128	+	Splice_Site	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	HBP1	NM_001244262	exon6	c.795+2T>C	.	.	.	64	4	54	0	.	91
HCN2	610	ucsc.edu	37	19	603625	603625	+	Silent	SNP	T	T	C	rs56342526	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	HCN2	NM_001194	exon2	c.T714C	p.D238D	.	.	118	34	20	1	T|0.866;C|0.134	90
HCN2	610	ucsc.edu	37	19	603634	603634	+	Silent	SNP	T	T	C	rs56131056	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	HCN2	NM_001194	exon2	c.T723C	p.T241T	.	.	106	27	22	1	T|0.856;C|0.144	90
HEG1	57493	bcgsc.ca	37	3	124732410	124732410	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	HEG1	NM_020733	exon6	c.T2013C	p.S671S	.	.	65	1	29	1	.	70
HEG1	57493	bcgsc.ca	37	3	124738225	124738225	+	Missense_Mutation	SNP	T	T	C	rs200892253	alternate_allele	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	HEG1	NM_020733	exon5	c.A1469G	p.D490G	.	.	152	7	81	0	T|0.999;G|0.001	70
HEG1	57493	hgsc.bcm.edu	37	3	124732433	124732434	+	In_Frame_Ins	INS	-	-	AGAGGAGGAGGAGGAGGA	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	HEG1	NM_020733	exon6	c.1990_1991insTCCTCCTCCTCCTCCTCT	p.S664delinsSSSSSSS	.	.	102	16	36	0	.	70
HERC1	8925	broad.mit.edu;bcgsc.ca	37	15	63935625	63935625	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	HERC1	NM_003922	exon58	c.T11309C	p.L3770P	.	.	260	7	101	1	.	666
HERC2	8924	bcgsc.ca	37	15	28377319	28377319	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	HERC2	NM_004667	exon81	c.T12497C	p.V4166A	.	.	167	8	66	0	.	234
HIVEP1	3096	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	6	12125147	12125148	+	Frame_Shift_Ins	INS	-	-	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	HIVEP1	NM_002114	exon4	c.5119_5120insA	p.E1707fs	.	.	246	43	63	0	.	139
HIVEP3	59269	bcgsc.ca	37	1	42048603	42048603	+	Silent	SNP	T	T	C	rs138999280		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	HIVEP3	NM_024503	exon4	c.A1866G	p.E622E	.	.	294	8	133	1	T|1.000;C|0.000	157
HLA-A	3105	bcgsc.ca	37	6	29912373	29912373	+	Missense_Mutation	SNP	T	T	G	rs1137110	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	HLA-A	NM_001242758	exon5	c.T992G	p.M331R	.	.	527	109	105	0	T|0.947;G|0.053	92
HLA-C	3107	broad.mit.edu	37	6	31238853	31238853	+	Missense_Mutation	SNP	C	C	T	rs17849598		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	HLA-C	NM_002117	exon3	c.G616A	p.A206T	.	.	250	9	45	0	.	90
HLA-DQB1	3119	bcgsc.ca	37	6	32632700	32632700	+	Missense_Mutation	SNP	T	T	A	rs34981357		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	HLA-DQB1	NM_002123	exon2	c.A254T	p.Q85L	.	.	80	42	27	0	.	22
HLA-DRB1	3123	hgsc.bcm.edu	37	6	32549368	32549368	+	Silent	SNP	G	G	A	rs34295373	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	HLA-DRB1	NM_002124	exon3	c.C618T	p.H206H	.	.	312	67	77	0	G|0.830;A|0.170	1
HMGCS1	3157	bcgsc.ca	37	5	43295968	43295968	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	HMGCS1	NM_001098272	exon6	c.A791G	p.H264R	.	.	176	6	96	0	.	90
HNRNPA2B1	3181	bcgsc.ca	37	7	26237352	26237352	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	HNRNPA2B1	NM_031243	exon3	c.A43G	p.R15G	.	.	182	6	70	0	.	70
HNRNPR	10236	bcgsc.ca	37	1	23660051	23660051	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	HNRNPR	NM_005826	exon5	c.A458G	p.D153G	.	.	91	4	44	0	.	24
HSD17B7P2	158160	broad.mit.edu	37	10	38654432	38654432	+	RNA	SNP	A	A	G	rs2257765	bysubmitter	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	.	.	.	570	31	144	0	A|1.000;|0.000	.
HSP90B1	7184	bcgsc.ca	37	12	104337076	104337076	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	HSP90B1	NM_003299	exon13	c.A1869G	p.K623K	.	.	152	5	67	0	.	93
HSPA4L	22824	bcgsc.ca	37	4	128751880	128751880	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	HSPA4L	NM_014278	exon18	c.A2254G	p.M752V	.	.	166	6	113	0	.	228
HSPG2	3339	bcgsc.ca	37	1	22181209	22181209	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	HSPG2	NM_005529	exon49	c.T6183C	p.S2061S	.	.	67	4	54	0	.	141
HTR3C	170572	bcgsc.ca	37	3	183774002	183774002	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	HTR3C	NM_130770	exon4	c.A317G	p.E106G	.	.	150	6	52	0	.	154
IFNA22P	3453	ucsc.edu;bcgsc.ca	37	9	21278435	21278435	+	RNA	SNP	G	G	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	.	.	.	64	26	38	0	.	.
IFNL3	282617	ucsc.edu	37	19	39735106	39735106	+	Missense_Mutation	SNP	T	T	C	rs8103142	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_172139	exon2	c.A209G	p.K70R	.	.	114	44	41	12	T|0.752;C|0.248	.
IL18RAP	8807	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	103068506	103068506	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	IL18RAP	NM_003853	exon12	c.G1665T	p.M555I	.	.	152	61	67	0	.	95
INHBA	3624	bcgsc.ca;mdanderson.org	37	7	41729607	41729607	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	INHBA	NM_002192	exon3	c.C922T	p.R308C	.	.	65	38	32	1	.	703
IQCA1	79781	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	2	237300683	237300683	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	IQCA1	NM_001270585	exon11	c.1370delA	p.N457fs	.	.	344	149	114	0	.	23
IRF2	3660	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	4	185320192	185320192	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	IRF2	NM_002199	exon7	c.G571T	p.E191X	.	.	104	88	73	0	.	91
ITGA4	3676	bcgsc.ca	37	2	182395334	182395334	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ITGA4	NM_000885	exon24	c.A2622G	p.K874K	.	.	228	6	103	0	.	230
ITGB3	3690	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	45387555	45387555	+	Silent	SNP	G	G	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ITGB3	NM_000212	exon15	c.G2352C	p.T784T	.	.	237	100	76	0	.	714
ITPR3	3710	bcgsc.ca	37	6	33662756	33662756	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ITPR3	NM_002224	exon57	c.A7841G	p.E2614G	.	.	151	5	43	1	.	1085
KBTBD8	84541	bcgsc.ca	37	3	67054718	67054718	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	KBTBD8	NM_032505	exon3	c.A1327G	p.I443V	.	.	188	6	90	0	.	587
KCNJ18	100134444	bcgsc.ca	37	17	21319488	21319488	+	Silent	SNP	C	C	T	rs77176173	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_001194958	exon3	c.C834T	p.S278S	.	.	197	19	51	0	C|0.989;T|0.011	.
KCTD3	51133	hgsc.bcm.edu	37	1	215747171	215747171	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	KCTD3	NM_016121	exon2	c.126delT	p.S42fs	.	.	836	9	165	1	.	93
KIAA0753	9851	bcgsc.ca	37	17	6511699	6511699	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	KIAA0753	NM_014804	exon10	c.C1798A	p.L600M	.	.	123	5	77	0	.	90
KIAA1009	22832	broad.mit.edu	37	6	84862510	84862510	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	KIAA1009	NM_014895	exon23	c.A3383G	p.E1128G	.	.	225	5	140	0	.	91
KIAA1462	57608	bcgsc.ca	37	10	30317325	30317325	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	KIAA1462	NM_020848	exon3	c.T1752C	p.S584S	.	.	113	5	57	0	.	72
KIAA1751	85452	bcgsc.ca	37	1	1887112	1887112	+	Frame_Shift_Del	DEL	C	C	-	rs3838975		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	KIAA1751	NM_001080484	exon18	c.2194delG	p.A732fs	.	.	47	38	29	2	-|0.217;G|0.783	69
KIAA1755	85449	bcgsc.ca	37	20	36859656	36859656	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	KIAA1755	NM_001029864	exon5	c.T1819C	p.C607R	.	.	80	4	32	0	.	95
KLHDC2	23588	bcgsc.ca	37	14	50244929	50244929	+	Silent	SNP	T	T	C	rs140863624	byfrequency;alternate_allele	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	KLHDC2	NM_014315	exon5	c.T501C	p.P167P	.	.	297	8	116	0	T|0.998;G|0.002	91
KNG1	3827	bcgsc.ca	37	3	186449408	186449408	+	Silent	SNP	C	C	T	rs201005798		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	KNG1	NM_000893	exon6	c.C747T	p.D249D	.	.	117	5	45	0	C|0.999;T|0.001	92
KRT6B	3854	ucsc.edu	37	12	52842736	52842736	+	Missense_Mutation	SNP	T	T	C	rs437014	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	KRT6B	NM_005555	exon6	c.A1093G	p.I365V	.	.	242	42	64	0	T|0.044;C|0.956	92
KRT81	3887	ucsc.edu	37	12	52681437	52681437	+	Silent	SNP	A	A	G	rs3187034	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	KRT81	NM_002281	exon6	c.T969C	p.N323N	.	.	177	45	58	4	A|0.668;G|0.332	90
KRTAP3-2	83897	ucsc.edu	37	17	39155969	39155969	+	Missense_Mutation	SNP	A	A	G	rs3813050	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_031959	exon1	c.T137C	p.I46T	.	.	240	47	76	14	A|0.773;G|0.227	.
KRTAP4-11	653240	broad.mit.edu	37	17	39274291	39274291	+	Missense_Mutation	SNP	T	T	C	rs200214744		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_033059	exon1	c.A277G	p.M93V	.	.	107	31	24	2	.	.
KRTAP4-6	81871	broad.mit.edu	37	17	39296422	39296422	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_030976	exon1	c.T318C	p.R106R	.	.	84	13	21	2	.	.
KRTAP9-4	85280	ucsc.edu	37	17	39406104	39406104	+	Silent	SNP	T	T	G	rs11655843	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	KRTAP9-4	NM_033191	exon1	c.T132G	p.V44V	.	.	56	25	17	5	T|0.453;G|0.547	44
KTN1	3895	bcgsc.ca	37	14	56138304	56138304	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	KTN1	NM_001079521	exon36	c.A3369G	p.K1123K	.	.	182	6	83	0	.	1147
LCE1B	353132	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	152785040	152785040	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	LCE1B	NM_178349	exon1	c.G118T	p.V40F	.	.	839	180	100	0	.	68
LDLRAD1	388633	ucsc.edu	37	1	54476082	54476082	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	LDLRAD1	NM_001276395	exon4	c.A182T	p.E61V	.	.	37	4	30	0	.	137
LINC00861	100130231	bcgsc.ca	37	8	126964328	126964328	+	RNA	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	.	.	.	88	4	34	0	.	.
LMTK3	114783	hgsc.bcm.edu	37	19	49012702	49012703	+	Frame_Shift_Ins	INS	-	-	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	LMTK3	NM_001080434	exon5	c.517_518insG	p.F173fs	.	.	201	31	58	0	.	1357
LNPEP	4012	bcgsc.ca	37	5	96350746	96350746	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	LNPEP	NM_005575	exon13	c.A2323G	p.I775V	.	.	170	5	82	0	.	229
LOC283922	0	bcgsc.ca	37	16	74372576	74372576	+	RNA	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	.	.	.	29	6	28	0	.	.
LOC283922	0	bcgsc.ca	37	16	74372609	74372609	+	RNA	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	.	.	.	40	7	36	0	.	.
LONP1	9361	ucsc.edu	37	19	5694556	5694556	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	LONP1	NM_004793	exon15	c.C2162T	p.T721I	.	.	42	4	14	0	.	91
LPIN2	9663	bcgsc.ca	37	18	2920785	2920785	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	LPIN2	NM_014646	exon19	c.A2537G	p.N846S	.	.	242	8	91	0	.	227
LRIT3	345193	bcgsc.ca	37	4	110791218	110791218	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	LRIT3	NM_198506	exon4	c.A1313G	p.N438S	.	.	130	5	72	0	.	90
LRR1	122769	bcgsc.ca	37	14	50074171	50074171	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	LRR1	NM_152329	exon3	c.A336G	p.R112R	.	.	143	6	79	0	.	227
LRRC23	10233	bcgsc.ca	37	12	7016492	7016492	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	LRRC23	NM_001135217	exon5	c.C504T	p.H168H	.	.	122	5	49	0	.	23
LUZP2	338645	bcgsc.ca	37	11	24927592	24927592	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	LUZP2	NM_001009909	exon6	c.C452T	p.A151V	.	.	68	4	46	0	.	92
MAD2L2	10459	bcgsc.ca	37	1	11736120	11736120	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MAD2L2	NM_006341	exon6	c.T410C	p.L137P	.	.	92	4	58	0	.	659
MAN2B2	23324	bcgsc.ca	37	4	6611532	6611532	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MAN2B2	NM_015274	exon13	c.A2014G	p.T672A	.	.	89	7	38	0	.	92
MAP4K4	9448	hgsc.bcm.edu	37	2	102452432	102452432	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MAP4K4	NM_004834	exon9	c.765delA	p.S255fs	.	.	575	18	147	4	.	547
MAP4K5	11183	bcgsc.ca	37	14	50952362	50952362	+	Splice_Site	SNP	T	T	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MAP4K5	NM_198794	exon6	c.258-2A>T	.	.	.	128	5	69	0	.	546
MAPK4	5596	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	18	48190630	48190630	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MAPK4	NM_002747	exon2	c.C302T	p.A101V	.	.	36	14	15	0	.	1404
MARVELD3	91862	bcgsc.ca	37	16	71674728	71674728	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MARVELD3	NM_001017967	exon3	c.A1031G	p.K344R	.	.	62	4	39	0	.	91
MBTD1	54799	bcgsc.ca	37	17	49272595	49272595	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MBTD1	NM_017643	exon13	c.T1352C	p.I451T	.	.	166	5	75	0	.	92
MCL1	4170	hgsc.bcm.edu	37	1	150551926	150551927	+	Frame_Shift_Ins	INS	-	-	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MCL1	NM_021960	exon1	c.81_82insG	p.G27fs	.	.	209	13	13	0	.	227
METAP1D	254042	bcgsc.ca	37	2	172926280	172926280	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	METAP1D	NM_199227	exon2	c.C95T	p.S32L	.	.	258	8	96	0	.	90
MIS12	79003	bcgsc.ca	37	17	5392570	5392570	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MIS12	NM_001258220	exon2	c.A388G	p.T130A	.	.	52	4	57	0	.	90
MKI67	4288	hgsc.bcm.edu	37	10	129904535	129904535	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MKI67	NM_002417	exon13	c.5569delA	p.I1857fs	.	.	1112	13	178	3	.	519
MKKS	8195	bcgsc.ca	37	20	10393291	10393291	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MKKS	NM_170784	exon3	c.T872C	p.V291A	.	.	114	5	66	0	.	90
MPRIP	23164	hgsc.bcm.edu	37	17	16979041	16979042	+	Frame_Shift_Ins	INS	-	-	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MPRIP	NM_015134	exon2	c.141_142insG	p.G47fs	.	.	143	9	47	0	.	90
MRPL50	54534	bcgsc.ca	37	9	104160859	104160859	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MRPL50	NM_019051	exon1	c.G16T	p.V6L	.	.	58	5	28	0	.	226
MST1L	11223	ucsc.edu	37	1	17086870	17086870	+	Missense_Mutation	SNP	T	T	C	rs2261727	byfrequency;by2hit2allele	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_001271733	exon4	c.A454G	p.S152G	.	.	21	12	17	4	T|0.667;C|0.333	.
MTHFD1	4522	bcgsc.ca	37	14	64891650	64891650	+	Splice_Site	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MTHFD1	NM_005956	exon9	c.855+1G>A	.	.	.	69	4	29	0	.	92
MTMR11	10903	bcgsc.ca	37	1	149902853	149902853	+	Missense_Mutation	SNP	G	G	A	rs145144126		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MTMR11	NM_001145862	exon14	c.C1295T	p.P432L	.	.	94	5	38	0	G|1.000;A|0.000	90
MTPAP	55149	bcgsc.ca	37	10	30605082	30605082	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MTPAP	NM_018109	exon7	c.G1277A	p.S426N	.	.	230	7	121	0	.	91
MTR	4548	bcgsc.ca	37	1	237015835	237015835	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MTR	NM_000254	exon17	c.A1710G	p.G570G	.	.	145	5	36	0	.	92
MUC16	94025	bcgsc.ca	37	19	9061717	9061717	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MUC16	NM_024690	exon3	c.T25729C	p.S8577P	.	.	173	6	79	0	.	566
MUC21	394263	bcgsc.ca	37	6	30954480	30954480	+	Silent	SNP	G	G	A	rs139959059	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MUC21	NM_001010909	exon2	c.G528A	p.G176G	.	.	402	29	60	0	G|0.997;A|0.003	92
MUC21	394263	bcgsc.ca	37	6	30954648	30954648	+	Silent	SNP	G	G	A	rs147486343	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MUC21	NM_001010909	exon2	c.G696A	p.T232T	.	.	307	95	36	0	G|0.993;A|0.007	92
MUC21	394263	bcgsc.ca	37	6	30954659	30954659	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MUC21	NM_001010909	exon2	c.G707A	p.G236E	.	.	325	29	33	0	.	92
MUC21	394263	bcgsc.ca	37	6	30954663	30954663	+	Silent	SNP	C	C	T	rs138124420	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MUC21	NM_001010909	exon2	c.C711T	p.A237A	.	.	313	52	34	0	C|0.964;T|0.036	92
MUC21	394263	bcgsc.ca	37	6	30954694	30954694	+	Missense_Mutation	SNP	C	C	A	rs112415706	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MUC21	NM_001010909	exon2	c.C742A	p.P248T	.	.	293	105	29	1	C|0.886;A|0.114	92
MUC21	394263	bcgsc.ca	37	6	30955066	30955066	+	Missense_Mutation	SNP	A	A	G	rs41288695	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MUC21	NM_001010909	exon2	c.A1114G	p.T372A	.	.	145	47	24	0	A|0.966;G|0.034	92
MUC21	394263	bcgsc.ca	37	6	30955143	30955143	+	Silent	SNP	G	G	A	rs41288705	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MUC21	NM_001010909	exon2	c.G1191A	p.T397T	.	.	230	75	40	1	G|0.967;A|0.033	92
MUC21	394263	hgsc.bcm.edu	37	6	30954774	30954774	+	Missense_Mutation	SNP	G	G	C	rs41288649	bycluster	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MUC21	NM_001010909	exon2	c.G822C	p.E274D	.	.	472	46	63	0	G|0.500;C|0.500	92
MUC21	394263	ucsc.edu	37	6	30955250	30955250	+	Missense_Mutation	SNP	A	A	G	rs148670493	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MUC21	NM_001010909	exon2	c.A1298G	p.N433S	.	.	344	32	65	0	A|0.999;G|0.001	92
MUC2	4583	broad.mit.edu	37	11	1092954	1092954	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MUC2	NM_002457	exon30	c.G4773A	p.T1591T	.	.	161	7	57	1	.	90
MUC4	4585	bcgsc.ca	37	3	195509573	195509573	+	Missense_Mutation	SNP	A	A	G	rs28510889		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MUC4	NM_018406	exon2	c.T8878C	p.S2960P	.	.	216	80	55	5	.	90
MUC4	4585	bcgsc.ca	37	3	195511403	195511403	+	Missense_Mutation	SNP	C	C	T	rs78846267		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MUC4	NM_018406	exon2	c.G7048A	p.A2350T	.	.	325	27	69	1	C|0.995;T|0.005	90
MUC4	4585	bcgsc.ca	37	3	195511412	195511412	+	Missense_Mutation	SNP	T	T	A	rs199878638		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MUC4	NM_018406	exon2	c.A7039T	p.T2347S	.	.	337	32	63	0	.	90
MUC4	4585	bcgsc.ca	37	3	195511431	195511431	+	Silent	SNP	A	A	G	rs201715837	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MUC4	NM_018406	exon2	c.T7020C	p.T2340T	.	.	277	35	51	0	A|0.981;G|0.019	90
MUC4	4585	bcgsc.ca	37	3	195515134	195515134	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MUC4	NM_018406	exon2	c.C3317A	p.P1106H	.	.	150	14	48	0	.	90
MUC4	4585	broad.mit.edu	37	3	195507051	195507051	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MUC4	NM_018406	exon2	c.A11400G	p.S3800S	.	.	135	9	36	0	.	90
MUC4	4585	ucsc.edu	37	3	195509443	195509443	+	Missense_Mutation	SNP	A	A	G	rs74585045		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MUC4	NM_018406	exon2	c.T9008C	p.I3003T	.	.	171	67	31	8	A|0.250;G|0.750	90
MUC6	4588	bcgsc.ca	37	11	1016836	1016836	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MUC6	NM_005961	exon31	c.T5965A	p.F1989I	.	.	2953	104	196	3	.	23
MUC6	4588	bcgsc.ca	37	11	1017036	1017036	+	Missense_Mutation	SNP	G	G	A	rs75538227	bycluster;byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MUC6	NM_005961	exon31	c.C5765T	p.T1922I	.	.	1532	242	153	6	G|0.625;A|0.375	23
MUC6	4588	bcgsc.ca	37	11	1017392	1017392	+	Silent	SNP	A	A	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MUC6	NM_005961	exon31	c.T5409G	p.P1803P	.	.	1260	51	169	4	.	23
MUC6	4588	hgsc.bcm.edu	37	11	1017892	1017894	+	In_Frame_Del	DEL	CAT	CAT	-	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	CAT	CAT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MUC6	NM_005961	exon31	c.4907_4909del	p.1636_1637del	.	.	1654	0	188	0	.	23
MUC6	4588	hgsc.bcm.edu	37	11	1017974	1017974	+	Missense_Mutation	SNP	C	C	G	rs200353019		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MUC6	NM_005961	exon31	c.G4827C	p.Q1609H	.	.	1013	53	135	0	.	23
MUC6	4588	ucsc.edu	37	11	1018024	1018024	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MUC6	NM_005961	exon31	c.G4777C	p.A1593P	.	.	439	43	87	0	.	23
MUC7	4589	ucsc.edu	37	4	71347207	71347207	+	Missense_Mutation	SNP	T	T	C	rs78564790	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MUC7	NM_001145007	exon4	c.T746C	p.L249P	.	.	963	117	162	4	T|0.935;C|0.065	93
MYH7	4625	bcgsc.ca	37	14	23886174	23886174	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MYH7	NM_000257	exon33	c.T4547C	p.L1516S	.	.	164	6	56	0	.	94
MYO6	4646	bcgsc.ca	37	6	76538259	76538259	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MYO6	NM_004999	exon4	c.T190C	p.S64P	.	.	130	5	110	1	.	92
MYO7A	4647	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	76917166	76917166	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	MYO7A	NM_000260	exon41	c.G5661A	p.P1887P	.	.	84	32	37	0	.	138
NACA	4666	bcgsc.ca	37	12	57114333	57114333	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	NACA	NM_001113203	exon3	c.T981C	p.G327G	.	.	93	5	29	0	.	254
NBPF10	100132406	broad.mit.edu	37	1	145304613	145304613	+	Missense_Mutation	SNP	T	T	C	rs113902225		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_001039703	exon10	c.T1546C	p.S516P	.	.	2069	25	161	2	.	.
NBPF22P	285622	broad.mit.edu	37	5	85589049	85589049	+	RNA	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	.	.	.	997	12	182	0	.	.
NBPF9	400818	broad.mit.edu	37	1	144828583	144828583	+	Silent	SNP	G	G	A	rs76717388		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	.	.	.	550	80	86	0	G|0.500;A|0.500	.
NBPF9	400818	broad.mit.edu	37	1	144828610	144828610	+	Silent	SNP	T	T	G	rs76444116		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	.	.	.	722	100	100	2	T|0.500;G|0.500	.
NCAPD3	23310	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	134029862	134029862	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	NCAPD3	NM_015261	exon29	c.C3792T	p.V1264V	.	.	117	60	43	0	.	229
NCOR2	9612	bcgsc.ca	37	12	124824576	124824576	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	NCOR2	NM_006312	exon39	c.A5663G	p.E1888G	.	.	131	7	46	0	.	229
NEIL3	55247	bcgsc.ca	37	4	178274682	178274682	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	NEIL3	NM_018248	exon8	c.T1260C	p.P420P	.	.	82	4	51	0	.	660
NELL1	4745	bcgsc.ca	37	11	21592317	21592317	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	NELL1	NM_006157	exon18	c.A1988G	p.K663R	.	.	80	4	45	0	.	155
NETO2	81831	bcgsc.ca	37	16	47156810	47156810	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	NETO2	NM_018092	exon5	c.T495C	p.T165T	.	.	70	4	66	0	.	90
NFIA	4774	broad.mit.edu;bcgsc.ca	37	1	61920983	61920983	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	NFIA	NM_005595	exon10	c.C1429T	p.P477S	.	.	120	8	77	0	.	92
NFX1	4799	bcgsc.ca	37	9	33294556	33294556	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	NFX1	NM_147134	exon2	c.A164G	p.H55R	.	.	110	5	44	0	.	91
NHSL1	57224	bcgsc.ca	37	6	138752671	138752671	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	NHSL1	NM_020464	exon5	c.T2823C	p.S941S	.	.	54	5	35	0	.	68
NLRP4	147945	bcgsc.ca	37	19	56370318	56370318	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	NLRP4	NM_134444	exon3	c.G1559A	p.G520D	.	.	130	5	70	0	.	216
NOL11	25926	ucsc.edu;bcgsc.ca	37	17	65720207	65720207	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	NOL11	NM_015462	exon6	c.A562G	p.I188V	.	.	43	4	29	0	.	90
NRAP	4892	bcgsc.ca	37	10	115381661	115381661	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	NRAP	NM_001261463	exon24	c.A2736G	p.E912E	.	.	215	7	78	0	.	522
NRP2	8828	bcgsc.ca	37	2	206659775	206659775	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	NRP2	NM_201266	exon17	c.A2789G	p.E930G	.	.	70	4	33	0	.	93
NT5C2	22978	bcgsc.ca	37	10	104866428	104866428	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	NT5C2	NM_012229	exon5	c.G211A	p.E71K	.	.	158	5	58	0	.	90
NUBP2	10101	ucsc.edu	37	16	1836867	1836867	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	NUBP2	NM_012225	exon3	c.A245G	p.D82G	.	.	27	4	15	0	.	90
NUCB1	4924	bcgsc.ca	37	19	49422494	49422494	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	NUCB1	NM_006184	exon10	c.T953C	p.L318P	.	.	68	4	32	0	.	90
NUP205	23165	bcgsc.ca	37	7	135261745	135261745	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	NUP205	NM_015135	exon5	c.T517C	p.F173L	.	.	226	6	67	0	.	207
NXF1	10482	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	62566040	62566040	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	NXF1	NM_006362	exon11	c.C1024G	p.R342G	.	.	99	49	49	0	.	228
NXF3	56000	bcgsc.ca	37	X	102337226	102337226	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	NXF3	NM_022052	exon9	c.A847G	p.S283G	.	.	216	7	79	0	.	205
NXPE3	91775	bcgsc.ca	37	3	101520446	101520446	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_145037	exon5	c.A461G	p.Q154R	.	.	145	6	59	0	.	.
OAS2	4939	bcgsc.ca	37	12	113416531	113416531	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	OAS2	NM_002535	exon1	c.A118G	p.T40A	.	.	107	7	53	0	.	91
OCSTAMP	128506	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	20	45174216	45174216	+	Missense_Mutation	SNP	C	C	T	rs76943342		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_080721	exon2	c.G797A	p.R266Q	.	.	89	25	36	0	C|0.997;T|0.003	.
OR10G2	26534	ucsc.edu	37	14	22102592	22102592	+	Missense_Mutation	SNP	T	T	C	rs10138694	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	OR10G2	NM_001005466	exon1	c.A407G	p.H136R	.	.	139	24	63	2	T|0.629;C|0.371	69
OR10G2	26534	ucsc.edu	37	14	22102612	22102612	+	Silent	SNP	T	T	C	rs10138704	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	OR10G2	NM_001005466	exon1	c.A387G	p.L129L	.	.	141	23	58	0	T|0.628;C|0.372	69
OR10H1	26539	ucsc.edu	37	19	15918647	15918647	+	Silent	SNP	G	G	T	rs77552342		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	OR10H1	NM_013940	exon1	c.C201A	p.S67S	.	.	218	56	78	26	T|1.000;|0.000	68
OR13C2	392376	ucsc.edu	37	9	107367431	107367431	+	Missense_Mutation	SNP	A	A	T	rs61735925	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	OR13C2	NM_001004481	exon1	c.T478A	p.S160T	.	.	337	87	104	10	A|0.158;T|0.842	69
OR2M3	127062	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	248366773	248366773	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	OR2M3	NM_001004689	exon1	c.T404C	p.L135P	.	.	911	202	147	0	.	70
OR2T27	403239	ucsc.edu	37	1	248813827	248813827	+	Missense_Mutation	SNP	T	T	C	rs61834488	bycluster;byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	OR2T27	NM_001001824	exon1	c.A359G	p.Y120C	.	.	337	212	91	32	T|0.333;C|0.667	47
OR2T4	127074	hgsc.bcm.edu	37	1	248525640	248525640	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	OR2T4	NM_001004696	exon1	c.T758C	p.I253T	.	.	1593	78	175	0	.	68
OR4D2	124538	ucsc.edu;bcgsc.ca	37	17	56247078	56247078	+	Missense_Mutation	SNP	G	G	A	rs73323532	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	OR4D2	NM_001004707	exon1	c.G62A	p.R21Q	.	.	241	34	97	0	G|0.992;A|0.008	114
OR4N3P	390539	bcgsc.ca;mdanderson.org	37	15	22413859	22413859	+	RNA	SNP	C	C	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	.	.	.	1233	233	175	0	.	.
OR51A2	401667	ucsc.edu	37	11	4976241	4976241	+	Missense_Mutation	SNP	C	C	G	rs78337070		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	OR51A2	NM_001004748	exon1	c.G703C	p.E235Q	.	.	529	215	144	41	G|1.000;|0.000	68
OR52I2	143502	ucsc.edu	37	11	4608262	4608262	+	Missense_Mutation	SNP	A	A	C	rs79116379		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	OR52I2	NM_001005170	exon1	c.A220C	p.I74L	.	.	779	147	150	38	A|0.500;C|0.500	91
OR6B1	135946	ucsc.edu;bcgsc.ca	37	7	143701970	143701970	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	OR6B1	NM_001005281	exon1	c.A881G	p.E294G	.	.	68	6	38	0	.	91
OR7G3	390883	bcgsc.ca	37	19	9236803	9236803	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	OR7G3	NM_001001958	exon1	c.C824T	p.S275L	.	.	144	5	60	0	.	69
OR8U1	219417	ucsc.edu	37	11	56143696	56143696	+	Silent	SNP	C	C	T	rs4990122	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	OR8U1	NM_001005204	exon1	c.C597T	p.I199I	.	.	908	100	165	3	C|0.991;T|0.009	72
OR8U1	219417	ucsc.edu;bcgsc.ca	37	11	56143699	56143699	+	Missense_Mutation	SNP	T	T	G	rs4990121	bycluster;byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	OR8U1	NM_001005204	exon1	c.T600G	p.F200L	.	.	910	98	164	2	T|0.500;G|0.500	72
ORC4	5000	bcgsc.ca	37	2	148715943	148715943	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ORC4	NM_002552	exon6	c.A311G	p.Q104R	.	.	106	6	60	0	.	207
OSBPL9	114883	bcgsc.ca	37	1	52222013	52222013	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	OSBPL9	NM_024586	exon9	c.C565T	p.H189Y	.	.	142	6	102	0	.	68
P2RY1	5028	bcgsc.ca	37	3	152553969	152553969	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	P2RY1	NM_002563	exon1	c.T398C	p.V133A	.	.	85	4	56	0	.	500
PACS2	23241	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	105858084	105858084	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PACS2	NM_001100913	exon22	c.G2236A	p.G746R	.	.	80	28	19	0	.	69
PAK2	5062	broad.mit.edu	37	3	196529902	196529902	+	Missense_Mutation	SNP	G	G	C	rs201465227	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PAK2	NM_002577	exon4	c.G303C	p.Q101H	.	.	145	11	65	1	G|0.914;C|0.086	957
PARP4	143	ucsc.edu	37	13	25016762	25016762	+	Missense_Mutation	SNP	G	G	A	rs113301501	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PARP4	NM_006437	exon29	c.C3509T	p.T1170I	.	.	419	53	130	8	G|0.935;A|0.065	94
PATE1	160065	bcgsc.ca	37	11	125617705	125617705	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PATE1	NM_138294	exon4	c.A235G	p.R79G	.	.	97	4	47	0	.	90
PCDHB8	56128	ucsc.edu	37	5	140559103	140559103	+	Silent	SNP	T	T	C	rs61748923	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PCDHB8	NM_019120	exon1	c.T1488C	p.D496D	.	.	188	50	73	6	T|0.408;C|0.592	131
PCID2	55795	bcgsc.ca	37	13	113851551	113851551	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PCID2	NM_018386	exon4	c.T207C	p.T69T	.	.	109	5	47	0	.	90
PCMTD1	115294	hgsc.bcm.edu	37	8	52733023	52733023	+	Missense_Mutation	SNP	T	T	C	rs114725410		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PCMTD1	NM_052937	exon6	c.A962G	p.N321S	.	.	754	40	162	0	.	68
PDAP1	11333	bcgsc.ca	37	7	99002517	99002517	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PDAP1	NM_014891	exon2	c.G73A	p.A25T	.	.	64	4	33	0	.	90
PDE2A	5138	bcgsc.ca	37	11	72300281	72300281	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PDE2A	NM_002599	exon12	c.A877G	p.T293A	.	.	117	5	51	0	.	156
PDPR	55066	ucsc.edu	37	16	70161263	70161263	+	Missense_Mutation	SNP	T	T	C	rs2549532	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PDPR	NM_017990	exon4	c.T328C	p.Y110H	.	.	359	120	138	64	T|0.563;C|0.437	135
PDPR	55066	ucsc.edu	37	16	70182375	70182375	+	Silent	SNP	T	T	C	rs62050977	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PDPR	NM_017990	exon17	c.T1971C	p.S657S	.	.	255	35	100	7	T|0.715;C|0.286	135
PDSS2	57107	bcgsc.ca	37	6	107515031	107515031	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PDSS2	NM_020381	exon7	c.G1036A	p.A346T	.	.	74	4	63	0	.	92
PGA3	643834	ucsc.edu	37	11	60971069	60971069	+	Silent	SNP	A	A	G	rs1610547	bycluster;byfrequency;by2hit2allele	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PGA3	NM_001079807	exon1	c.A33G	p.A11A	.	.	639	249	104	20	A|0.556;G|0.444	24
PIBF1	10464	bcgsc.ca	37	13	73590050	73590050	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PIBF1	NM_006346	exon18	c.A2267G	p.K756R	.	.	50	4	35	0	.	136
PIGN	23556	broad.mit.edu;bcgsc.ca	37	18	59815516	59815516	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PIGN	NM_176787	exon8	c.A605G	p.E202G	.	.	214	6	128	0	.	227
PIK3R4	30849	bcgsc.ca	37	3	130442334	130442334	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PIK3R4	NM_014602	exon7	c.T1905C	p.A635A	.	.	117	5	42	0	.	1471
PITRM1	10531	bcgsc.ca	37	10	3199200	3199200	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PITRM1	NM_001242307	exon13	c.A1404G	p.G468G	.	.	88	4	52	0	.	91
PLA2R1	22925	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	160833216	160833216	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PLA2R1	NM_001195641	exon16	c.T2417C	p.I806T	.	.	250	115	121	0	.	93
PLOD2	5352	bcgsc.ca	37	3	145799628	145799628	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PLOD2	NM_182943	exon12	c.A1255G	p.T419A	.	.	80	4	44	0	.	92
PMS2CL	441194	broad.mit.edu	37	7	6785797	6785797	+	RNA	SNP	C	C	T	rs141880038	by1000genomes	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	.	.	.	197	6	79	0	C|0.860;T|0.140	.
POLE4	56655	bcgsc.ca	37	2	75185932	75185932	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	POLE4	NM_019896	exon1	c.T126C	p.P42P	.	.	172	8	65	0	.	227
POLN	353497	broad.mit.edu	37	4	2200355	2200355	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	POLN	NM_181808	exon4	c.T804C	p.G268G	.	.	164	6	58	0	.	539
POP1	10940	bcgsc.ca	37	8	99135655	99135655	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	POP1	NM_001145860	exon2	c.A90G	p.R30R	.	.	102	6	40	0	.	154
POTEC	388468	hgsc.bcm.edu	37	18	14543063	14543063	+	Missense_Mutation	SNP	A	A	C	rs45626231		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	POTEC	NM_001137671	exon1	c.T83G	p.F28C	.	.	607	28	130	0	A|1.000;|0.000	3
POTEH	23784	ucsc.edu	37	22	16287789	16287789	+	Missense_Mutation	SNP	C	C	G	rs201322170		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	POTEH	NM_001136213	exon1	c.G97C	p.A33P	.	.	365	84	95	0	.	1
PPA2	27068	ucsc.edu	37	4	106345451	106345451	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PPA2	NM_176869	exon7	c.T557C	p.V186A	.	.	32	4	19	0	.	91
PPIAL4G	644591	ucsc.edu	37	1	143767628	143767628	+	Missense_Mutation	SNP	C	C	T	rs78696306	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_001123068	exon1	c.G221A	p.G74D	.	.	518	209	73	4	C|0.667;T|0.333	.
PPIAL4G	644591	ucsc.edu	37	1	143767643	143767643	+	Missense_Mutation	SNP	T	T	C	rs78862507	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_001123068	exon1	c.A206G	p.H69R	.	.	551	245	75	0	T|0.667;C|0.333	.
PRAMEF12	390999	ucsc.edu	37	1	12837571	12837571	+	Silent	SNP	A	A	G	rs201380993		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PRAMEF12	NM_001080830	exon3	c.A1281G	p.G427G	.	.	383	42	134	3	A|0.999;G|0.001	25
PRAMEF1	65121	ucsc.edu	37	1	12854162	12854162	+	Missense_Mutation	SNP	C	C	T	rs199893374		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PRAMEF1	NM_023013	exon3	c.C386T	p.T129M	.	.	111	80	66	11	.	22
PRAMEF1	65121	ucsc.edu	37	1	12854356	12854356	+	Missense_Mutation	SNP	T	T	C	rs80079739	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PRAMEF1	NM_023013	exon3	c.T580C	p.Y194H	.	.	260	203	163	61	T|0.500;C|0.500	22
PRAMEF1	65121	ucsc.edu	37	1	12855766	12855766	+	Missense_Mutation	SNP	C	C	T	rs150001555	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PRAMEF1	NM_023013	exon4	c.C1046T	p.A349V	.	.	105	61	88	18	C|0.998;T|0.002	22
PRAMEF2	65122	bcgsc.ca	37	1	12918986	12918986	+	Missense_Mutation	SNP	G	G	T	rs1063757	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PRAMEF2	NM_023014	exon2	c.G122T	p.R41M	.	.	60	34	73	8	G|0.994;T|0.006	68
PRB1	5542	ucsc.edu	37	12	11506749	11506749	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PRB1	NM_199353	exon3	c.A288G	p.K96K	.	.	613	198	121	34	.	90
PRDM11	56981	bcgsc.ca	37	11	45245858	45245858	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PRDM11	NM_001256695	exon7	c.A833G	p.Q278R	.	.	131	6	56	0	.	91
PRG4	10216	bcgsc.ca	37	1	186270762	186270762	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PRG4	NM_005807	exon4	c.A238G	p.R80G	.	.	305	8	67	0	.	91
PRH1	5554	ucsc.edu	37	12	11035274	11035274	+	Missense_Mutation	SNP	G	G	T	rs28607516		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_006250	exon3	c.C124A	p.L42I	.	.	227	85	75	19	G|0.143;T|0.857	.
PRH2	5555	ucsc.edu	37	12	11083356	11083356	+	Missense_Mutation	SNP	A	A	G	rs116998526	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PRH2	NM_001110213	exon3	c.A196G	p.N66D	.	.	411	130	115	26	A|0.989;G|0.011	90
PRKCD	5580	bcgsc.ca	37	3	53220623	53220623	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PRKCD	NM_212539	exon13	c.C1264T	p.H422Y	.	.	144	7	63	0	.	1378
PRRT4	401399	bcgsc.ca	37	7	127999542	127999542	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_001174164	exon3	c.T504C	p.A168A	.	.	78	4	36	0	.	.
PSG10P	653492	ucsc.edu	37	19	43349294	43349294	+	RNA	SNP	A	A	G	rs2074591	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	.	.	.	64	16	19	0	A|0.674;G|0.326	.
PSMC5	5705	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	61908431	61908431	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PSMC5	NM_002805	exon8	c.C715T	p.R239W	.	.	118	34	51	0	.	178
PTPRB	5787	bcgsc.ca	37	12	71029471	71029471	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PTPRB	NM_001109754	exon2	c.A431G	p.E144G	.	.	69	4	37	0	.	226
PTPRD	5789	bcgsc.ca	37	9	8389230	8389230	+	Splice_Site	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	PTPRD	NM_001171025	exon21	c.3165+2T>C	.	.	.	105	5	69	0	.	912
PTPRQ	374462	hgsc.bcm.edu	37	12	80838611	80838622	+	In_Frame_Del	DEL	GTGACAACAAAT	GTGACAACAAAT	-	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	GTGACAACAAAT	GTGACAACAAAT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_001145026	exon2	c.145_156del	p.49_52del	.	.	127	33	52	0	.	.
PTPRQ	374462	hgsc.bcm.edu	37	12	80865968	80865968	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_001145026	exon5	c.C608T	p.A203V	.	.	125	5	61	0	.	.
RAB11FIP3	9727	bcgsc.ca	37	16	521379	521379	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	RAB11FIP3	NM_014700	exon3	c.T893C	p.V298A	.	.	72	4	55	0	.	90
RAD50	10111	bcgsc.ca	37	5	131915123	131915123	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	RAD50	NM_005732	exon4	c.A480G	p.E160E	.	.	151	6	85	0	.	229
RAET1L	154064	ucsc.edu	37	6	150343211	150343211	+	Missense_Mutation	SNP	A	A	G	rs912565	bycluster;by2hit2allele	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	RAET1L	NM_130900	exon2	c.T254C	p.M85T	.	.	319	237	178	22	G|1.000;|0.000	90
RBBP6	5930	bcgsc.ca	37	16	24583705	24583705	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	RBBP6	NM_006910	exon18	c.A5318G	p.N1773S	.	.	62	4	56	0	.	230
RBBP8	5932	bcgsc.ca	37	18	20573146	20573146	+	Silent	SNP	A	A	G	rs150893664		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	RBBP8	NM_203292	exon11	c.A1356G	p.E452E	.	.	219	6	89	0	A|1.000;G|0.000	659
RBM27	54439	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	145641135	145641135	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	RBM27	NM_018989	exon13	c.G1956A	p.R652R	.	.	236	83	95	1	.	70
RECQL	5965	bcgsc.ca	37	12	21628724	21628724	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	RECQL	NM_032941	exon10	c.A984G	p.E328E	.	.	80	4	38	0	.	228
RFC4	5984	bcgsc.ca	37	3	186518939	186518939	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	RFC4	NM_181573	exon3	c.T177C	p.V59V	.	.	168	6	66	0	.	291
RFPL2	10739	ucsc.edu	37	22	32586875	32586875	+	Missense_Mutation	SNP	G	G	A	rs136468	bycluster;byfrequency;by2hit2allele;by1000genomes	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	RFPL2	NM_001098527	exon5	c.C1021T	p.R341C	.	.	209	48	72	7	G|0.561;A|0.439	91
RFPL2	10739	ucsc.edu	37	22	32586878	32586878	+	Silent	SNP	A	A	G	rs136469	bycluster;byfrequency;by2hit2allele;by1000genomes	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	RFPL2	NM_001098527	exon5	c.T1018C	p.L340L	.	.	216	47	75	8	A|0.589;G|0.411	91
RHCE	6006	ucsc.edu	37	1	25747230	25747230	+	Missense_Mutation	SNP	G	G	C	rs586178	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	RHCE	NM_138617	exon1	c.C48G	p.C16W	.	.	41	23	38	0	G|0.658;C|0.342	90
ROBO4	54538	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	124763622	124763622	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ROBO4	NM_019055	exon10	c.G1509T	p.L503L	.	.	283	106	93	0	.	92
RP1L1	94137	bcgsc.ca	37	8	10467605	10467605	+	Missense_Mutation	SNP	C	C	T	rs61503212		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	RP1L1	NM_178857	exon4	c.G4003A	p.G1335R	.	.	660	24	131	0	C|0.500;T|0.500	139
RP1L1	94137	broad.mit.edu;bcgsc.ca	37	8	10467681	10467686	+	In_Frame_Del	DEL	TCCTTC	TCCTTC	-	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	TCCTTC	TCCTTC	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	RP1L1	NM_178857	exon4	c.3922_3927del	p.1308_1309del	.	.	332	0	44	0	.	139
RP1L1	94137	hgsc.bcm.edu	37	8	10467628	10467629	+	In_Frame_Ins	INS	-	-	TTTTAGTCCCCTCTAACTGCACCCCCTCTTCTTGCAGCCCTTCTTCTG	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	RP1L1	NM_178857	exon4	c.3980_3981insCAGAAGAAGGGCTGCAAGAAGAGGGGGTGCAGTTAGAGGGGACTAAAA	p.T1327delinsTEEGLQEEGVQLEGTKT	.	.	541	0	97	0	.	139
RPS6KA3	6197	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	X	20252926	20252926	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	RPS6KA3	NM_004586	exon2	c.C76T	p.Q26X	.	.	243	204	108	0	.	1504
RPS6KC1	26750	bcgsc.ca	37	1	213403887	213403887	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	RPS6KC1,NS,carcinoma,+2	RPS6KC1	NM_012424	exon9	c.A1092G	p.K364K	.	.	75	4	35	0	.	417
RTL1	388015	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	101348750	101348750	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	RTL1	NM_001134888	exon1	c.C2376T	p.N792N	.	.	159	69	56	0	.	46
RTN3	10313	bcgsc.ca	37	11	63487180	63487180	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	RTN3	NM_001265589	exon3	c.A1206G	p.T402T	.	.	67	4	32	0	.	91
RYR1	6261	bcgsc.ca	37	19	39038976	39038976	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	RYR1	NM_000540	exon89	c.A12198G	p.K4066K	.	.	140	5	48	0	.	100
SDHAP2	727956	broad.mit.edu	37	3	195410687	195410687	+	RNA	SNP	T	T	A	rs6583274	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	.	.	.	945	89	168	3	T|0.959;A|0.041	.
SDHAP2	727956	ucsc.edu	37	3	195395399	195395399	+	RNA	SNP	G	G	A	rs62287990	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	.	.	.	616	197	136	54	G|0.731;A|0.269	.
SDHAP2	727956	ucsc.edu	37	3	195395402	195395402	+	RNA	SNP	C	C	A	rs2688572	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	.	.	.	633	205	135	53	C|0.500;A|0.500	.
SEC24A	10802	bcgsc.ca	37	5	134033738	134033738	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SEC24A	NM_021982	exon15	c.T2257C	p.C753R	.	.	54	4	36	0	.	68
SERINC1	57515	bcgsc.ca	37	6	122772879	122772879	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SERINC1	NM_020755	exon7	c.T780C	p.G260G	.	.	46	4	38	0	.	91
SERPINB6	5269	bcgsc.ca	37	6	2953376	2953376	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SERPINB6	NM_001271823	exon5	c.A532G	p.T178A	.	.	165	6	37	0	.	226
SESN1	27244	bcgsc.ca	37	6	109322606	109322606	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SESN1	NM_014454	exon3	c.C431T	p.T144M	.	.	137	6	83	0	.	227
SGOL1	151648	bcgsc.ca	37	3	20212295	20212295	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SGOL1	NM_001012409	exon8	c.A1485G	p.R495R	.	.	186	6	89	0	.	90
SH3D19	152503	bcgsc.ca	37	4	152048843	152048843	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SH3D19	NM_001009555	exon20	c.T2183C	p.I728T	.	.	131	5	76	0	.	92
SHISA7	729956	bcgsc.ca	37	19	55949031	55949031	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_001145176	exon3	c.C917A	p.P306Q	.	.	80	5	34	0	.	.
SI	6476	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	164750329	164750329	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SI	NM_001041	exon24	c.C2717T	p.T906I	.	.	96	35	49	0	.	104
SIRPA	140885	bcgsc.ca	37	20	1895984	1895984	+	Missense_Mutation	SNP	C	C	A	rs17855615	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SIRPA	NM_001040022	exon3	c.C319A	p.R107S	.	.	698	53	156	0	C|0.700;A|0.300	227
SIRPA	140885	bcgsc.ca	37	20	1895990	1895990	+	Missense_Mutation	SNP	G	G	A	rs201545978		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SIRPA	NM_001040022	exon3	c.G325A	p.G109S	.	.	680	57	157	0	.	227
SLC16A12	387700	bcgsc.ca	37	10	91198369	91198369	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SLC16A12	NM_213606	exon6	c.C1020A	p.T340T	.	.	88	5	38	0	.	69
SLC22A13	9390	bcgsc.ca	37	3	38317539	38317539	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SLC22A13	NM_004256	exon7	c.T1189C	p.L397L	.	.	148	5	77	0	.	91
SLC26A4	5172	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	7	107315471	107315471	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SLC26A4	NM_000441	exon6	c.G682T	p.A228S	.	.	310	23	108	0	.	96
SLC27A6	28965	bcgsc.ca	37	5	128301980	128301980	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SLC27A6	NM_001017372	exon1	c.A150G	p.R50R	.	.	220	8	85	0	.	90
SLC2A3	6515	ucsc.edu	37	12	8082367	8082367	+	Silent	SNP	T	T	C	rs17847967	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SLC2A3	NM_006931	exon6	c.A774G	p.L258L	.	.	604	108	141	0	T|0.846;C|0.154	94
SLC35G5	83650	ucsc.edu	37	8	11189535	11189535	+	Missense_Mutation	SNP	T	T	C	rs12681991	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_054028	exon1	c.T920C	p.L307P	.	.	223	96	60	12	T|0.557;C|0.443	.
SLC39A6	25800	bcgsc.ca	37	18	33703621	33703621	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SLC39A6	NM_012319	exon4	c.T977C	p.V326A	.	.	81	4	43	0	.	92
SLC6A10P	386757	broad.mit.edu	37	16	32890639	32890639	+	RNA	SNP	T	T	C	rs79284655	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	.	.	.	62	6	35	1	T|0.993;C|0.007	.
SMG8	55181	bcgsc.ca	37	17	57290485	57290485	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SMG8	NM_018149	exon3	c.T2301C	p.S767S	.	.	106	5	53	0	.	93
SNX31	169166	bcgsc.ca	37	8	101608882	101608882	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SNX31	NM_152628	exon10	c.G963T	p.W321C	.	.	83	4	54	0	.	68
SOBP	55084	bcgsc.ca	37	6	107824862	107824862	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SOBP	NM_018013	exon2	c.A98G	p.N33S	.	.	73	4	54	0	.	91
SON	6651	ucsc.edu	37	21	34923319	34923319	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SON	NM_032195	exon3	c.A1782G	p.L594L	.	.	165	5	60	0	.	97
SPATA12	353324	bcgsc.ca	37	3	57108257	57108257	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SPATA12	NM_181727	exon2	c.A535T	p.T179S	.	.	107	5	50	0	.	90
SPATA3	130560	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	231865207	231865207	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_139073	exon2	c.A428T	p.Q143L	.	.	133	53	62	0	.	.
SPATA31C1	441452	hgsc.bcm.edu	37	9	90534192	90534193	+	In_Frame_Ins	INS	-	-	TCTTGTCTCCCAGCGTCA	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_001145124	exon2	c.212_213insTCTTGTCTCCCAGCGTCA	p.H71delinsHLVSQRH	.	.	1192	0	174	0	.	.
SPATA6	54558	bcgsc.ca	37	1	48860981	48860981	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SPATA6	NM_019073	exon8	c.G826A	p.G276R	.	.	92	4	60	0	.	91
SPTBN1	6711	mdanderson.org	37	2	54858605	54858605	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SPTBN1	NM_003128	exon16	c.C3421T	p.R1141W	.	.	84	36	28	1	.	140
SPZ1	84654	bcgsc.ca	37	5	79616782	79616782	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SPZ1	NM_032567	exon1	c.T748C	p.L250L	.	.	176	6	94	0	.	91
SRRM2	23524	bcgsc.ca	37	16	2806532	2806532	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SRRM2	NM_016333	exon2	c.A167G	p.D56G	.	.	81	5	31	0	.	93
ST6GAL1	6480	bcgsc.ca	37	3	186793416	186793416	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ST6GAL1	NM_003032	exon7	c.A1046G	p.K349R	.	.	182	6	57	0	.	650
STAB1	23166	bcgsc.ca	37	3	52548188	52548188	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	STAB1	NM_015136	exon33	c.A3505G	p.T1169A	.	.	115	8	33	0	.	139
STAB2	55576	bcgsc.ca	37	12	104063364	104063364	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	STAB2	NM_017564	exon21	c.T2218C	p.C740R	.	.	72	4	43	0	.	104
STAT4	6775	bcgsc.ca	37	2	191926483	191926483	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	STAT4	NM_001243835	exon10	c.A1006G	p.T336A	.	.	121	5	63	0	.	914
STON2	85439	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	14	81744756	81744756	+	Missense_Mutation	SNP	G	G	A	rs201611443		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	STON2	NM_001256430	exon6	c.C899T	p.T300M	.	.	118	15	61	0	.	95
SULT1A2	6799	ucsc.edu	37	16	28607232	28607232	+	Missense_Mutation	SNP	A	A	G	rs4149404	bycluster;byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SULT1A2	NM_001054	exon2	c.T20C	p.I7T	.	.	27	10	35	0	A|0.696;G|0.304	90
SUPV3L1	6832	bcgsc.ca	37	10	70946205	70946205	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SUPV3L1	NM_003171	exon3	c.T356C	p.L119P	.	.	134	5	65	0	.	227
SYNCRIP	10492	bcgsc.ca	37	6	86332346	86332346	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SYNCRIP	NM_006372	exon8	c.T862C	p.F288L	.	.	63	4	78	0	.	92
SYNE2	23224	bcgsc.ca	37	14	64519908	64519908	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SYNE2	NM_182914	exon48	c.A9277G	p.K3093E	.	.	142	5	69	0	.	164
SYNE2	23224	bcgsc.ca	37	14	64520200	64520200	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SYNE2	NM_182914	exon48	c.A9569G	p.D3190G	.	.	223	7	113	0	.	164
SZT2	23334	ucsc.edu;bcgsc.ca	37	1	43893354	43893354	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	SZT2	NM_015284	exon25	c.A3581G	p.E1194G	.	.	31	4	27	0	.	144
TACC1	6867	bcgsc.ca	37	8	38696024	38696024	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	TACC1	NM_006283	exon8	c.A1876G	p.K626E	.	.	93	4	45	0	.	187
TAF7	6879	broad.mit.edu	37	5	140699602	140699602	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	TAF7	NM_005642	exon1	c.A10G	p.S4G	.	.	328	6	134	1	.	90
TAGAP	117289	bcgsc.ca	37	6	159457416	159457416	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	TAGAP	NM_054114	exon10	c.A1639G	p.S547G	.	.	69	6	47	1	.	91
TAS2R30	259293	ucsc.edu	37	12	11286164	11286164	+	Missense_Mutation	SNP	G	G	A	rs200661425		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_001097643	exon1	c.C680T	p.A227V	.	.	314	40	106	2	.	.
TCEAL3	85012	mdanderson.org	37	X	102864334	102864334	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	TCEAL3	NM_001006933	exon3	c.G342A	p.T114T	.	.	333	32	99	0	.	90
TCEAL5	340543	broad.mit.edu	37	X	102529084	102529084	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	TCEAL5	NM_001012979	exon3	c.A408G	p.Q136Q	.	.	478	21	142	0	.	175
TCHH	7062	bcgsc.ca	37	1	152083818	152083820	+	In_Frame_Del	DEL	CGG	CGG	-	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	CGG	CGG	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	TCHH	NM_007113	exon3	c.1873_1875del	p.625_625del	.	.	561	88	84	0	.	72
TCHH	7062	bcgsc.ca	37	1	152084009	152084026	+	In_Frame_Del	DEL	TCTCCTGCTCGAGCCTCT	TCTCCTGCTCGAGCCTCT	-	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	TCTCCTGCTCGAGCCTCT	TCTCCTGCTCGAGCCTCT	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	TCHH	NM_007113	exon3	c.1667_1684del	p.556_562del	.	.	683	0	105	0	.	72
TES	26136	bcgsc.ca	37	7	115889083	115889083	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	TES	NM_015641	exon3	c.T123C	p.C41C	.	.	83	4	45	0	.	514
TEX15	56154	broad.mit.edu	37	8	30702350	30702350	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	TEX15	NM_031271	exon1	c.T4184C	p.L1395P	.	.	295	6	111	1	.	97
TJP1	7082	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	30012108	30012108	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	TJP1	NM_003257	exon20	c.C2876T	p.P959L	.	.	268	119	93	0	.	95
TNFRSF19	55504	bcgsc.ca	37	13	24190015	24190015	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	TNFRSF19	NM_018647	exon4	c.T190C	p.F64L	.	.	65	4	33	0	.	228
TNK1	8711	bcgsc.ca	37	17	7287840	7287840	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	TNK1	NM_003985	exon7	c.T904C	p.S302P	.	.	110	6	38	0	.	547
TNS1	7145	hgsc.bcm.edu;ucsc.edu	37	2	218696257	218696257	+	Silent	SNP	C	C	T	rs146820371		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	TNS1	NM_022648	exon20	c.G2919A	p.P973P	.	.	35	18	16	0	C|1.000;T|0.000	156
TOM1L1	10040	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	52991114	52991114	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	TOM1L1	NM_005486	exon5	c.G378C	p.W126C	.	.	146	69	69	0	.	91
TPD52L1	7164	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	6	125584076	125584076	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	TPD52L1	NM_003287	exon7	c.C583T	p.R195W	.	.	18	10	16	0	.	90
TPM1	7168	bcgsc.ca	37	15	63362105	63362105	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	TPM1	NM_001018008	exon8	c.T701C	p.L234P	.	.	117	5	43	0	.	90
TPRX1	284355	ucsc.edu	37	19	48305650	48305650	+	Silent	SNP	C	C	T	rs112397458	bycluster;byfrequency;by1000genomes	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	TPRX1	NM_198479	exon2	c.G618A	p.P206P	.	.	51	1	15	1	C|0.912;T|0.088	90
TPTE2P6	374491	broad.mit.edu	37	13	25161397	25161397	+	RNA	SNP	C	C	G	rs3874227	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	.	.	.	279	26	97	0	C|0.917;G|0.083	.
TPTE2P6	374491	broad.mit.edu	37	13	25161457	25161457	+	RNA	SNP	G	G	A	rs1851732	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	.	.	.	580	38	143	2	G|1.000;|0.000	.
TRIOBP	11078	broad.mit.edu	37	22	38120006	38120006	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	TRIOBP	NM_001039141	exon7	c.T1443C	p.C481C	.	.	376	27	100	0	.	136
TRPM6	140803	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	77339554	77339554	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	TRPM6	NM_017662	exon39	c.C6044A	p.S2015Y	.	.	265	98	107	1	.	335
TSGA13	114960	broad.mit.edu;bcgsc.ca	37	7	130365809	130365809	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	TSGA13	NM_052933	exon4	c.G149A	p.R50Q	.	.	224	7	90	0	.	92
TTN	7273	bcgsc.ca	37	2	179631290	179631290	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	TTN	NM_001267550	exon41	c.A9521G	p.D3174G	.	.	181	6	72	0	.	636
TTN	7273	bcgsc.ca	37	2	179634935	179634935	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	TTN	NM_001267550	exon36	c.T8493C	p.S2831S	.	.	244	8	100	0	.	636
TUBA3E	112714	ucsc.edu	37	2	130952038	130952038	+	Missense_Mutation	SNP	G	G	A	rs13000721	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	TUBA3E	NM_207312	exon4	c.C377T	p.A126V	.	.	273	95	82	24	G|0.676;A|0.324	69
TUBA3E	112714	ucsc.edu	37	2	130952718	130952718	+	Silent	SNP	G	G	A	rs3853852	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	TUBA3E	NM_207312	exon3	c.C309T	p.Y103Y	.	.	343	115	108	24	G|0.637;A|0.363	69
TUBA3E	112714	ucsc.edu	37	2	130952725	130952725	+	Missense_Mutation	SNP	C	C	T	rs74378236	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	TUBA3E	NM_207312	exon3	c.G302A	p.S101N	.	.	332	117	108	23	C|0.500;T|0.500	69
UBE2J1	51465	ucsc.edu;bcgsc.ca	37	6	90053415	90053415	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	UBE2J1	NM_016021	exon2	c.C92A	p.A31E	.	.	38	4	38	0	.	226
UCP2	7351	bcgsc.ca	37	11	73686679	73686679	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	UCP2	NM_003355	exon7	c.A672G	p.A224A	.	.	100	8	37	0	.	90
UGT2B17	7367	ucsc.edu	37	4	69416556	69416556	+	Silent	SNP	T	T	C	rs76661554		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	UGT2B17	NM_001077	exon5	c.A1152G	p.A384A	.	.	478	109	113	10	T|0.250;C|0.750	91
UGT2B28	54490	ucsc.edu;bcgsc.ca	37	4	70160338	70160338	+	Silent	SNP	G	G	C	rs72552703		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	UGT2B28	NM_053039	exon6	c.G1401C	p.V467V	.	.	249	67	68	3	G|0.792;C|0.208	91
UNC13B	10497	bcgsc.ca	37	9	35381102	35381102	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	UNC13B	NM_006377	exon18	c.A2134G	p.R712G	.	.	154	5	54	0	.	157
UROC1	131669	ucsc.edu	37	3	126218977	126218977	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	UROC1	NM_001165974	exon13	c.C1346T	p.A449V	.	.	48	4	16	0	.	91
USP21	27005	bcgsc.ca	37	1	161130735	161130735	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	USP21	NM_012475	exon2	c.T305C	p.L102P	.	.	199	6	49	0	.	660
VANGL1	81839	bcgsc.ca	37	1	116233960	116233960	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	VANGL1	NM_138959	exon8	c.A1535G	p.H512R	.	.	139	5	97	0	.	226
VCAN	1462	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	82833574	82833574	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	VCAN	NM_004385	exon8	c.C4752T	p.P1584P	.	.	119	30	77	0	.	238
VEZF1	7716	bcgsc.ca	37	17	56056604	56056604	+	Silent	SNP	T	T	C	rs138088904	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	VEZF1	NM_007146	exon5	c.A1047G	p.Q349Q	.	.	227	12	61	2	T|0.999;C|0.001	136
VN1R4	317703	ucsc.edu	37	19	53770261	53770261	+	Missense_Mutation	SNP	T	T	C	rs56873934	bycluster;byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	VN1R4	NM_173857	exon1	c.A658G	p.N220D	.	.	138	44	46	10	T|0.500;C|0.500	92
VPS13A	23230	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	79867172	79867172	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	VPS13A	NM_001018038	exon22	c.G2192A	p.R731Q	.	.	139	64	61	0	.	161
VPS33A	65082	bcgsc.ca	37	12	122734529	122734529	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	VPS33A	NM_022916	exon6	c.C664T	p.P222S	.	.	143	5	83	0	.	91
WBP2NL	164684	bcgsc.ca	37	22	42423146	42423146	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	WBP2NL	NM_152613	exon6	c.T891C	p.A297A	.	.	75	4	36	0	.	92
WDR47	22911	bcgsc.ca	37	1	109554331	109554331	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	WDR47	NM_001142550	exon5	c.A358T	p.T120S	.	.	44	4	43	0	.	91
WDR59	79726	bcgsc.ca	37	16	74983660	74983660	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	WDR59	NM_030581	exon5	c.G363A	p.L121L	.	.	93	5	68	0	.	92
WHSC1L1	54904	hgsc.bcm.edu	37	8	38205092	38205092	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	WHSC1L1	NM_017778	exon2	c.598delA	p.S200fs	.	.	1042	11	186	1	.	658
XPNPEP2	7512	ucsc.edu	37	X	128884497	128884497	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	XPNPEP2	NM_003399	exon8	c.C691T	p.Q231X	.	.	44	4	15	0	.	130
XPO5	57510	bcgsc.ca	37	6	43538418	43538418	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	XPO5	NM_020750	exon5	c.A442G	p.T148A	.	.	149	5	43	0	.	271
ZBTB1	22890	bcgsc.ca	37	14	64988920	64988920	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ZBTB1	NM_014950	exon2	c.A698G	p.E233G	.	.	117	5	57	0	.	91
ZBTB1	22890	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	64989700	64989700	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ZBTB1	NM_014950	exon2	c.A1478G	p.N493S	.	.	98	44	50	0	.	91
ZBTB6	10773	broad.mit.edu;bcgsc.ca	37	9	125674167	125674167	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ZBTB6	NM_006626	exon2	c.T185C	p.F62S	.	.	253	7	92	0	.	90
ZC3H13	23091	hgsc.bcm.edu	37	13	46549613	46549614	+	Frame_Shift_Del	DEL	CT	CT	-	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	CT	CT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ZC3H13	NM_015070	exon12	c.2272_2273del	p.758_758del	.	.	703	0	153	3	.	92
ZCRB1	85437	bcgsc.ca	37	12	42711698	42711698	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ZCRB1	NM_033114	exon4	c.T116C	p.V39A	.	.	99	5	62	0	.	91
ZDHHC13	54503	bcgsc.ca	37	11	19170823	19170823	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ZDHHC13	NM_019028	exon5	c.T464C	p.L155P	.	.	203	6	81	0	.	90
ZDHHC22	283576	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	77606003	77606003	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_174976	exon2	c.C79T	p.L27F	.	.	57	20	26	0	.	.
ZDHHC23	254887	bcgsc.ca	37	3	113677309	113677309	+	Silent	SNP	G	G	T	rs143268831	by1000genomes;alternate_allele	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ZDHHC23	NM_173570	exon5	c.G1140T	p.V380V	.	.	56	4	30	0	G|0.999;A|0.000	92
ZDHHC9	51114	bcgsc.ca	37	X	128940368	128940368	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ZDHHC9	NM_001008222	exon10	c.A1073G	p.E358G	.	.	139	5	56	0	.	131
ZFP106	64397	hgsc.bcm.edu	37	15	42742957	42742957	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ZFP106	NM_022473	exon2	c.1444delT	p.S482fs	.	.	538	9	153	2	.	515
ZFYVE26	23503	bcgsc.ca	37	14	68232983	68232983	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ZFYVE26	NM_015346	exon32	c.T5972C	p.V1991A	.	.	68	2	37	0	.	162
ZIC1	7545	bcgsc.ca	37	3	147130398	147130398	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ZIC1	NM_003412	exon2	c.A1076G	p.D359G	.	.	244	6	100	0	.	91
ZNF107	51427	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	64167564	64167564	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ZNF107	NM_016220	exon7	c.T882C	p.H294H	.	.	81	40	43	0	.	69
ZNF211	10520	broad.mit.edu	37	19	58153107	58153107	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ZNF211	NM_001265597	exon5	c.T1448C	p.L483P	.	.	94	7	49	0	.	92
ZNF256	10172	bcgsc.ca	37	19	58452925	58452925	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ZNF256	NM_005773	exon3	c.T1251C	p.T417T	.	.	85	6	34	0	.	92
ZNF263	10127	bcgsc.ca	37	16	3340502	3340502	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ZNF263	NM_005741	exon6	c.G1996A	p.E666K	.	.	41	4	37	0	.	94
ZNF431	170959	ucsc.edu	37	19	21366361	21366361	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ZNF431	NM_133473	exon5	c.A1255G	p.K419E	.	.	40	4	27	0	.	514
ZNF44	51710	bcgsc.ca	37	19	12383589	12383589	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ZNF44	NM_001164276	exon5	c.A1625G	p.H542R	.	.	121	5	64	0	.	23
ZNF462	58499	bcgsc.ca	37	9	109773272	109773272	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ZNF462	NM_021224	exon13	c.C7482T	p.D2494D	.	.	89	4	36	0	.	95
ZNF468	90333	ucsc.edu	37	19	53344118	53344118	+	Missense_Mutation	SNP	C	C	G	rs10419826	byfrequency	TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ZNF468	NM_001008801	exon4	c.G1429C	p.G477R	.	.	160	74	44	6	C|0.485;G|0.515	92
ZNF608	57507	bcgsc.ca	37	5	124036841	124036841	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ZNF608	NM_020747	exon2	c.T1028C	p.L343P	.	.	222	6	79	0	.	229
ZNF618	114991	bcgsc.ca	37	9	116811774	116811774	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	ZNF618	NM_133374	exon14	c.T1913C	p.L638P	.	.	57	5	39	0	.	22
ZNF814	730051	broad.mit.edu	37	19	58385546	58385546	+	Missense_Mutation	SNP	G	G	T	rs201682072		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	NM_001144989	exon3	c.C1212A	p.D404E	.	.	357	37	120	0	.	.
HNRNPCL1	343069	bcgsc.ca	37	1	12907350	12907351	+	Missense_Mutation	DNP	CA	CA	TG	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	CA	CA	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	p.D265N	.	.	.	.	.	.	.	
UGT2B28	54490	ucsc.edu;bcgsc.ca	37	4	70160342	70160343	+	Missense_Mutation	DNP	TG	TG	CC	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	TG	TG	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	p.C469P	.	.	.	.	.	.	.	
CTD-2089O24.1	0	bcgsc.ca	37	5	110284399	110284400	+	RNA	DNP	CT	CT	TC	novel		TCGA-DD-A1EH-01A-11D-A12Z-10	TCGA-DD-A1EH-10A-01D-A12Z-10	CT	CT	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	b9f03936-1de5-4330-8b0f-6d0ab533876e	47c44a9a-cfe6-4305-a9ea-b0fb5f2b5137	.	.	.	.	.	.	.	.	.	.	.	.	.	
