Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	TranscriptID	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov_SOL	TVarCov_SOL	NTotCov_SOL	NVarCov_SOL	dbSNPPopFreq	COSMIC_Gene_Freq
A1BG	1	bcgsc.ca	37	19	58863881	58863881	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	A1BG	NM_130786	exon4	c.C381T	p.S127S	.	.	34	4	63	0	.	90
ABCA13	154664	bcgsc.ca	37	7	48318895	48318895	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ABCA13	NM_152701	exon18	c.C8104A	p.H2702N	.	.	119	5	123	0	.	521
ABCA13	154664	bcgsc.ca	37	7	48528891	48528891	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ABCA13	NM_152701	exon48	c.A13241G	p.N4414S	.	.	192	7	407	4	.	521
ABCB11	8647	bcgsc.ca	37	2	169780295	169780295	+	Missense_Mutation	SNP	C	C	A	rs72549394	alternate_allele	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ABCB11	NM_003742	exon28	c.G3803T	p.R1268L	.	.	157	8	131	0	.	139
ABCB1	5243	bcgsc.ca	37	7	87180133	87180133	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ABCB1	NM_000927	exon11	c.G1021T	p.G341W	.	.	101	4	126	0	.	582
ABCB6	10058	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	220079777	220079777	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ABCB6	NM_005689	exon6	c.G1182T	p.T394T	.	.	102	22	110	0	.	153
ABCC11	85320	bcgsc.ca	37	16	48258223	48258223	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ABCC11	NM_033151	exon4	c.C513A	p.I171I	.	.	69	4	117	1	.	95
ABCE1	6059	bcgsc.ca	37	4	146029224	146029224	+	Missense_Mutation	SNP	A	A	G	rs200530576		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ABCE1	NM_002940	exon4	c.A247G	p.T83A	.	.	58	4	133	0	A|1.000;G|0.000	91
ABLIM1	3983	bcgsc.ca	37	10	116247718	116247718	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ABLIM1	NM_002313	exon8	c.G1040T	p.R347L	.	.	125	5	249	0	.	153
ABP1	26	bcgsc.ca	37	7	150555859	150555859	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ABP1	NM_001091	exon3	c.A1579G	p.N527D	.	.	60	4	129	0	.	139
ACAD10	80724	bcgsc.ca	37	12	112147369	112147369	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ACAD10	NM_001136538	exon5	c.C571T	p.P191S	.	.	53	4	98	0	.	92
ACAD9	28976	bcgsc.ca	37	3	128627862	128627862	+	Silent	SNP	C	C	A	rs139145143	byfrequency;alternate_allele	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ACAD9	NM_014049	exon14	c.C1405A	p.R469R	.	.	126	5	115	1	C|0.999;T|0.001	92
ACCS	84680	bcgsc.ca	37	11	44102594	44102594	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ACCS	NM_032592	exon11	c.T948C	p.H316H	.	.	76	4	83	0	.	155
ACCSL	390110	bcgsc.ca	37	11	44079977	44079977	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ACCSL	NM_001031854	exon12	c.T1438C	p.S480P	.	.	74	4	150	1	.	95
ACE	1636	bcgsc.ca	37	17	61556392	61556392	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ACE	NM_000789	exon3	c.A442G	p.S148G	.	.	72	4	75	0	.	94
ACIN1	22985	bcgsc.ca	37	14	23532185	23532185	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ACIN1	NM_014977	exon14	c.T3010C	p.S1004P	.	.	69	4	116	1	.	156
ACPT	93650	bcgsc.ca	37	19	51294930	51294930	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ACPT	NM_033068	exon4	c.G321T	p.T107T	.	.	71	5	50	0	.	90
ACTL8	81569	ucsc.edu;bcgsc.ca	37	1	18152622	18152622	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ACTL8	NM_030812	exon3	c.A709G	p.T237A	.	.	33	4	29	0	.	72
ACTN1	87	bcgsc.ca	37	14	69376757	69376757	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ACTN1	NM_001102	exon5	c.A430T	p.T144S	.	.	56	4	96	0	.	514
ACVR2B	93	bcgsc.ca	37	3	38523717	38523717	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ACVR2B	NM_001106	exon9	c.A1103G	p.E368G	.	.	143	6	142	1	.	942
ADAM10	102	bcgsc.ca	37	15	58974456	58974456	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ADAM10	NM_001110	exon3	c.A264G	p.V88V	.	.	86	4	133	0	.	227
ADAM28	10863	hgsc.bcm.edu;bcgsc.ca	37	8	24193031	24193031	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ADAM28	NM_014265	exon14	c.T1444C	p.S482P	.	.	120	8	230	0	.	228
ADAMTS18	170692	bcgsc.ca	37	16	77393230	77393230	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ADAMTS18	NM_199355	exon8	c.A1307G	p.H436R	.	.	48	4	48	0	.	1036
ADAMTS7	11173	bcgsc.ca	37	15	79058873	79058873	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ADAMTS7	NM_014272	exon19	c.C3380G	p.P1127R	.	.	36	5	106	0	.	226
ADAMTSL3	57188	bcgsc.ca	37	15	84581860	84581860	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ADAMTSL3	NM_207517	exon16	c.T1717C	p.W573R	.	.	58	4	110	0	.	1153
ADCY2	108	bcgsc.ca	37	5	7766809	7766809	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ADCY2	NM_020546	exon17	c.A2104G	p.S702G	.	.	123	6	171	0	.	97
ADD3	120	bcgsc.ca	37	10	111892101	111892101	+	Missense_Mutation	SNP	G	G	A	rs114935406	byfrequency;alternate_allele	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ADD3	NM_016824	exon14	c.G1771A	p.V591I	.	.	83	4	93	0	G|0.999;T|0.001	157
ADIPOR1	51094	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	202917500	202917500	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ADIPOR1	NM_015999	exon3	c.G190T	p.V64L	.	.	143	79	112	0	.	90
ADNP	23394	bcgsc.ca	37	20	49508105	49508105	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ADNP	NM_015339	exon5	c.A3146G	p.N1049S	.	.	55	4	70	0	.	92
ADPRHL1	113622	bcgsc.ca	37	13	114083333	114083333	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ADPRHL1	NM_138430	exon4	c.A580G	p.R194G	.	.	91	5	64	0	.	90
AFG3L2	10939	bcgsc.ca	37	18	12360040	12360040	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	AFG3L2	NM_006796	exon7	c.G638T	p.W213L	.	.	99	4	105	0	.	90
AGBL3	340351	hgsc.bcm.edu;bcgsc.ca	37	7	134717660	134717660	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_178563	exon6	c.G484A	p.V162M	.	.	82	44	195	0	.	.
AGBL3	340351	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	7	134717658	134717659	+	Frame_Shift_Ins	INS	-	-	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_178563	exon6	c.482_483insT	p.P161fs	.	.	82	42	193	0	.	.
AGL	178	bcgsc.ca	37	1	100345601	100345601	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	AGL	NM_000644	exon13	c.A1734G	p.R578R	.	.	157	5	191	1	.	92
AK7	122481	bcgsc.ca	37	14	96858510	96858510	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	AK7	NM_152327	exon1	c.A19G	p.T7A	.	.	52	4	66	0	.	228
AKAP13	11214	ucsc.edu;bcgsc.ca	37	15	86124813	86124813	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	AKAP13	NM_007200	exon7	c.G3514T	p.G1172C	.	.	34	4	55	0	.	258
AKAP9	10142	bcgsc.ca	37	7	91570458	91570458	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	AKAP9	NM_005751	exon1	c.C45A	p.A15A	.	.	66	4	83	0	.	755
AKAP9	10142	bcgsc.ca	37	7	91726591	91726591	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	AKAP9	NM_005751	exon41	c.A10318G	p.M3440V	.	.	154	5	258	1	.	755
AKT1	207	bcgsc.ca	37	14	105239702	105239702	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	AKT1	NM_005163	exon10	c.G843T	p.M281I	.	.	64	4	122	0	.	9189
ALDH8A1	64577	broad.mit.edu;bcgsc.ca	37	6	135265028	135265028	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ALDH8A1	NM_022568	exon2	c.T215C	p.V72A	.	.	54	5	47	1	.	94
ALG13	79868	bcgsc.ca	37	X	110971471	110971471	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ALG13	NM_001099922	exon19	c.G2306T	p.R769L	.	.	205	8	199	0	.	130
ALS2	57679	bcgsc.ca	37	2	202588117	202588117	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ALS2	NM_020919	exon22	c.A3560G	p.N1187S	.	.	300	8	378	0	.	275
AMER1	139285	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	63410708	63410708	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_152424	exon2	c.G2459T	p.G820V	.	.	62	58	56	0	.	.
AMOTL1	154810	bcgsc.ca	37	11	94599276	94599276	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	AMOTL1	NM_130847	exon11	c.A2431G	p.T811A	.	.	86	4	106	2	.	91
ANK3	288	bcgsc.ca	37	10	61831072	61831072	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ANK3	NM_020987	exon37	c.C9567A	p.L3189L	.	.	130	5	327	0	.	107
ANK3	288	bcgsc.ca	37	10	62149237	62149237	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ANK3	NM_020987	exon1	c.A60G	p.E20E	.	.	188	6	544	1	.	107
ANKH	56172	bcgsc.ca	37	5	14756050	14756050	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ANKH	NM_054027	exon4	c.T436C	p.W146R	.	.	68	4	154	0	.	91
ANKRD12	23253	bcgsc.ca	37	18	9254428	9254428	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ANKRD12	NM_015208	exon9	c.A1163G	p.E388G	.	.	147	5	193	1	.	92
ANKRD32	84250	bcgsc.ca	37	5	94030777	94030777	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ANKRD32	NM_032290	exon21	c.T2937C	p.A979A	.	.	108	5	311	0	.	92
ANKRD36	375248	ucsc.edu;bcgsc.ca	37	2	97808574	97808574	+	Splice_Site	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001164315	exon8	c.901+2T>C	.	.	.	19	4	122	0	.	.
ANKRD40	91369	bcgsc.ca	37	17	48784885	48784885	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ANKRD40	NM_052855	exon1	c.G131A	p.G44D	.	.	85	5	94	0	.	90
ANKRD49	54851	bcgsc.ca	37	11	94231346	94231346	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ANKRD49	NM_017704	exon3	c.T368C	p.I123T	.	.	76	4	96	0	.	90
ANO3	63982	bcgsc.ca	37	11	26463486	26463486	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ANO3	NM_031418	exon2	c.A68G	p.E23G	.	.	40	4	40	0	.	93
AP3B2	8120	ucsc.edu;bcgsc.ca	37	15	83346874	83346874	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	AP3B2	NM_004644	exon11	c.G1228A	p.V410I	.	.	28	4	55	0	.	94
AP5B1	91056	bcgsc.ca	37	11	65546029	65546029	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_138368	exon2	c.G1935A	p.V645V	.	.	94	5	84	1	.	.
APBB3	10307	bcgsc.ca	37	5	139940017	139940017	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	APBB3	NM_006051	exon11	c.C1126A	p.R376S	.	.	199	8	202	0	.	92
APC	324	bcgsc.ca	37	5	112173696	112173696	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	APC	NM_001127510	exon17	c.A2405G	p.D802G	.	.	82	4	80	0	.	12026
APC	324	bcgsc.ca	37	5	112176847	112176847	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	APC	NM_001127510	exon17	c.T5556C	p.T1852T	.	.	224	7	334	3	.	12026
APH1B	83464	bcgsc.ca	37	15	63579649	63579649	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	APH1B	NM_031301	exon4	c.A382G	p.S128G	.	.	188	6	412	0	.	658
APOH	350	bcgsc.ca	37	17	64213018	64213018	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	APOH	NM_000042	exon6	c.T672C	p.L224L	.	.	274	8	268	0	.	90
APOM	55937	bcgsc.ca	37	6	31625244	31625244	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	APOM	NM_019101	exon4	c.T431C	p.F144S	.	.	53	4	54	0	.	90
AQP2	359	bcgsc.ca	37	12	50348022	50348022	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	AQP2	NM_000486	exon2	c.A445G	p.T149A	.	.	39	4	49	0	.	92
AR	367	bcgsc.ca	37	X	66931356	66931356	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	AR	NM_000044	exon4	c.A1998G	p.E666E	.	.	106	6	112	1	.	661
ARHGAP1	392	bcgsc.ca	37	11	46703609	46703609	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ARHGAP1	NM_004308	exon5	c.T441C	p.F147F	.	.	79	4	113	0	.	227
ARHGAP32	9743	bcgsc.ca	37	11	128839197	128839197	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ARHGAP32	NM_001142685	exon22	c.T5869C	p.S1957P	.	.	206	7	213	0	.	231
ARHGAP5	394	bcgsc.ca	37	14	32561150	32561150	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ARHGAP5	NM_001173	exon2	c.G1275T	p.K425N	.	.	63	4	162	0	.	94
ARHGEF26	26084	bcgsc.ca	37	3	153972509	153972509	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ARHGEF26	NM_001251962	exon14	c.C2369T	p.S790L	.	.	80	4	67	0	.	47
ARHGEF28	64283	bcgsc.ca	37	5	73164028	73164028	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001080479	exon20	c.T2401C	p.S801P	.	.	86	4	163	0	.	.
ARHGEF5	7984	bcgsc.ca	37	7	144077065	144077065	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ARHGEF5	NM_005435	exon15	c.C4710T	p.S1570S	.	.	79	4	113	0	.	229
ARHGEF6	9459	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	135757211	135757211	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ARHGEF6	NM_004840	exon19	c.G1990C	p.E664Q	.	.	118	100	126	1	.	227
ARMC4	55130	bcgsc.ca	37	10	28272875	28272875	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ARMC4	NM_018076	exon6	c.C716A	p.P239Q	.	.	103	4	138	0	.	96
ARMC5	79798	bcgsc.ca	37	16	31473819	31473819	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ARMC5	NM_024742	exon3	c.A951G	p.A317A	.	.	38	4	41	0	.	24
ARPP21	10777	ucsc.edu;bcgsc.ca	37	3	35729300	35729300	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ARPP21	NM_001267619	exon5	c.T331C	p.S111P	.	.	33	4	299	0	.	93
ASAH2	56624	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	52005051	52005051	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ASAH2	NM_001143974	exon2	c.G291T	p.Q97H	.	.	339	178	361	0	.	90
ASB13	79754	bcgsc.ca	37	10	5694860	5694860	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ASB13	NM_024701	exon2	c.G197T	p.R66L	.	.	37	5	32	0	.	227
ASCC2	84164	bcgsc.ca	37	22	30212015	30212015	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ASCC2	NM_032204	exon6	c.A589G	p.T197A	.	.	141	6	167	1	.	90
ASPM	259266	bcgsc.ca	37	1	197072416	197072416	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ASPM	NM_018136	exon18	c.A5965G	p.K1989E	.	.	88	4	366	2	.	615
ASTN2	23245	bcgsc.ca	37	9	120176778	120176778	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ASTN2	NM_014010	exon1	c.C439A	p.L147M	.	.	168	7	130	1	.	161
ASXL1	171023	bcgsc.ca	37	20	31023069	31023069	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ASXL1	NM_015338	exon12	c.T2554C	p.S852P	.	.	211	6	215	1	.	2057
ATG13	9776	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	46679130	46679130	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ATG13	NM_001142673	exon10	c.G653A	p.R218H	.	.	172	68	178	3	.	68
ATG2B	55102	bcgsc.ca	37	14	96756924	96756924	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ATG2B	NM_018036	exon40	c.A5705G	p.Q1902R	.	.	46	4	100	0	.	93
ATG4A	115201	bcgsc.ca	37	X	107372017	107372017	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ATG4A	NM_178270	exon3	c.C128A	p.S43Y	.	.	59	4	44	0	.	131
ATM	472	bcgsc.ca	37	11	108204679	108204679	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ATM	NM_000051	exon54	c.C7994A	p.P2665H	.	.	132	5	160	0	.	3419
ATP10D	57205	bcgsc.ca	37	4	47570914	47570914	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ATP10D	NM_020453	exon16	c.C2914A	p.L972M	.	.	117	5	126	0	.	93
ATP5G3	518	bcgsc.ca	37	2	176043853	176043853	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ATP5G3	NM_001190329	exon4	c.A246G	p.T82T	.	.	138	6	92	0	.	91
ATP5J2-PTCD1	100526740	ucsc.edu;bcgsc.ca	37	7	99022590	99022590	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001198879	exon7	c.T1712C	p.F571S	.	.	45	5	63	0	.	.
ATP5SL	55101	ucsc.edu;bcgsc.ca	37	19	41939217	41939217	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ATP5SL	NM_001167867	exon5	c.C574A	p.R192S	.	.	42	4	52	0	.	135
ATP6V0A1	535	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	40652840	40652840	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ATP6V0A1	NM_001130020	exon16	c.G1816T	p.A606S	.	.	717	273	772	0	.	91
ATP7A	538	broad.mit.edu;bcgsc.ca	37	X	77245347	77245347	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ATP7A	NM_000052	exon4	c.T1229C	p.V410A	.	.	248	9	223	0	.	130
ATP9B	374868	bcgsc.ca	37	18	77104341	77104341	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ATP9B	NM_198531	exon21	c.G2459T	p.G820V	.	.	188	6	225	1	.	93
ATXN3L	92552	bcgsc.ca	37	X	13337640	13337640	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ATXN3L	NM_001135995	exon1	c.G414A	p.A138A	.	.	132	5	149	1	.	542
ATXN7L3	56970	bcgsc.ca	37	17	42272488	42272488	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ATXN7L3	NM_020218	exon9	c.A663G	p.E221E	.	.	161	6	156	0	.	68
AUP1	550	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	2	74755115	74755115	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	AUP1	NM_181575	exon7	c.690delT	p.H230fs	.	.	128	27	155	0	.	90
AVPR1A	552	ucsc.edu;bcgsc.ca	37	12	63544149	63544149	+	Silent	SNP	C	C	T	rs138241660	byfrequency	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	AVPR1A	NM_000706	exon1	c.G468A	p.P156P	.	.	39	4	63	0	C|1.000;T|0.000	946
AZI1	22994	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	79172746	79172746	+	Silent	SNP	G	G	A	rs112371137	byfrequency	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	AZI1	NM_014984	exon11	c.C1218T	p.P406P	.	.	58	20	59	1	G|0.989;A|0.011	136
BAG5	9529	bcgsc.ca	37	14	104027065	104027065	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	BAG5	NM_001015049	exon2	c.G560T	p.R187L	.	.	97	5	125	0	.	229
BAG5	9529	bcgsc.ca	37	14	104028285	104028285	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	BAG5	NM_001015049	exon1	c.A60G	p.E20E	.	.	139	5	189	2	.	229
BAK1	578	bcgsc.ca	37	6	33541853	33541853	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	BAK1	NM_001188	exon5	c.G489T	p.L163L	.	.	73	5	90	0	.	638
BCAP29	55973	bcgsc.ca	37	7	107240898	107240898	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	BCAP29	NM_018844	exon6	c.A537G	p.K179K	.	.	80	4	170	0	.	136
BCL11A	53335	bcgsc.ca	37	2	60688083	60688083	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	BCL11A	NM_018014	exon4	c.T1964C	p.V655A	.	.	54	5	40	0	.	1149
BIRC6	57448	bcgsc.ca	37	2	32582236	32582236	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	BIRC6	NM_016252	exon1	c.A7G	p.T3A	.	.	48	4	50	0	.	233
BMPR2	659	bcgsc.ca	37	2	203379650	203379650	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	BMPR2	NM_001204	exon5	c.A569G	p.E190G	.	.	201	6	234	1	.	1003
BOD1L1	259282	hgsc.bcm.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	13617012	13617012	+	Silent	SNP	C	C	A	rs56295497	byfrequency;alternate_allele	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_148894	exon3	c.G483T	p.T161T	.	.	166	73	342	1	C|0.988;T|0.012	.
BPIFA1	51297	bcgsc.ca	37	20	31828037	31828037	+	Splice_Site	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_016583	exon5	c.429-2A>G	.	.	.	69	4	106	0	.	.
BPIFB1	92747	bcgsc.ca	37	20	31890166	31890166	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_033197	exon10	c.T929C	p.L310P	.	.	149	5	142	0	.	.
BPIFB4	149954	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	31672752	31672752	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_182519	exon4	c.C732T	p.G244G	.	.	51	18	60	0	.	.
BRAP	8315	bcgsc.ca	37	12	112103521	112103521	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	BRAP	NM_006768	exon6	c.A818G	p.E273G	.	.	88	5	151	0	.	710
BRD2	6046	bcgsc.ca	37	6	32942317	32942317	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	BRD2	NM_005104	exon3	c.C108A	p.P36P	.	.	86	5	121	0	.	398
BRS3	680	bcgsc.ca	37	X	135574208	135574208	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	BRS3	NM_001727	exon3	c.C874A	p.L292I	.	.	233	7	232	0	.	131
BYSL	705	bcgsc.ca	37	6	41895226	41895226	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	BYSL	NM_004053	exon2	c.A383G	p.E128G	.	.	136	5	157	0	.	90
C10orf118	55088	bcgsc.ca	37	10	115885693	115885693	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	C10orf118	NM_018017	exon15	c.A2565G	p.K855K	.	.	70	4	199	0	.	92
C11orf65	160140	broad.mit.edu;bcgsc.ca	37	11	108253793	108253793	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	C11orf65	NM_152587	exon9	c.A897G	p.E299E	.	.	232	12	260	1	.	91
C11orf92	399948	ucsc.edu	37	11	111168677	111168677	+	RNA	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	C11orf92	.	.	.	.	.	.	36	4	54	0	.	226
C12orf4	57102	bcgsc.ca	37	12	4626291	4626291	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	C12orf4	NM_020374	exon9	c.A1098G	p.E366E	.	.	149	5	180	0	.	226
C12orf4	57102	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	4609389	4609389	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	C12orf4	NM_020374	exon11	c.G1355T	p.G452V	.	.	137	48	210	1	.	226
C14orf119	55017	bcgsc.ca	37	14	23567248	23567248	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	C14orf119	NM_017924	exon2	c.A381G	p.A127A	.	.	50	4	76	0	.	90
C15orf43	145645	bcgsc.ca	37	15	45266121	45266121	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	C15orf43	NM_152448	exon6	c.T491C	p.L164P	.	.	151	9	289	0	.	90
C17orf62	79415	bcgsc.ca	37	17	80403745	80403745	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	C17orf62	NM_001193657	exon6	c.A293G	p.D98G	.	.	60	5	71	0	.	90
C19orf21	126353	bcgsc.ca	37	19	759991	759991	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	C19orf21	NM_173481	exon3	c.A1863G	p.E621E	.	.	75	4	125	1	.	91
C19orf54	284325	broad.mit.edu	37	19	41255494	41255494	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_198476	exon1	c.T215C	p.V72A	.	.	180	5	211	1	.	.
C1orf173	127254	bcgsc.ca	37	1	75037442	75037442	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	C1orf173	NM_001002912	exon14	c.G3952T	p.G1318W	.	.	90	4	145	0	.	94
C20orf111	51526	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	42826208	42826208	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	C20orf111	NM_016470	exon4	c.G363T	p.L121L	.	.	102	38	108	0	.	90
C22orf34	348645	bcgsc.ca	37	22	50014265	50014265	+	RNA	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	.	.	.	.	.	.	71	4	57	0	.	.
C22orf46	79640	bcgsc.ca	37	22	42089653	42089653	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001142964	exon2	c.C403A	p.P135T	.	.	79	6	68	0	.	.
C2orf71	388939	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	2	29294437	29294437	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	C2orf71	NM_001029883	exon1	c.C2691T	p.T897T	.	.	47	12	40	0	.	91
C3orf17	25871	bcgsc.ca	37	3	112727269	112727269	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	C3orf17	NM_015412	exon8	c.T984C	p.S328S	.	.	57	4	79	0	.	90
C3orf37	56941	bcgsc.ca	37	3	129020878	129020878	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	C3orf37	NM_020187	exon6	c.A721G	p.I241V	.	.	127	6	118	0	.	91
C3orf52	79669	bcgsc.ca	37	3	111821798	111821798	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001171747	exon3	c.C382A	p.L128M	.	.	161	5	172	0	.	.
C3orf67	200844	bcgsc.ca	37	3	58870416	58870416	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	C3orf67	NM_198463	exon7	c.T195C	p.F65F	.	.	145	5	201	0	.	68
C4orf21	55345	bcgsc.ca	37	4	113508478	113508478	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	C4orf21	NM_018392	exon12	c.A3735G	p.L1245L	.	.	50	4	126	1	.	90
C6orf170	221322	bcgsc.ca	37	6	121625547	121625547	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	C6orf170	NM_152730	exon8	c.A899G	p.K300R	.	.	71	4	114	0	.	92
C7orf63	79846	bcgsc.ca	37	7	89938622	89938622	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	C7orf63	NM_001039706	exon22	c.C2596A	p.H866N	.	.	229	7	502	0	.	91
C9orf116	138162	bcgsc.ca	37	9	138391603	138391603	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	C9orf116	NM_144654	exon1	c.C95A	p.A32E	.	.	53	4	55	0	.	90
C9orf117	286207	bcgsc.ca	37	9	130474219	130474219	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	C9orf117	NM_001012502	exon5	c.C976A	p.Q326K	.	.	104	5	123	0	.	90
CA12	771	bcgsc.ca	37	15	63634223	63634223	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CA12	NM_206925	exon5	c.C503A	p.A168D	.	.	63	4	112	0	.	515
CACNA1B	774	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	140953173	140953173	+	Silent	SNP	G	G	C	rs199714779	alternate_allele	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CACNA1B	NM_001243812	exon29	c.G4461C	p.V1487V	.	.	107	38	96	0	.	138
CACNA1D	776	bcgsc.ca	37	3	53760914	53760914	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CACNA1D	NM_000720	exon16	c.A2169G	p.T723T	.	.	151	7	159	0	.	100
CACNA1S	779	bcgsc.ca	37	1	201022653	201022653	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CACNA1S	NM_000069	exon30	c.G3729A	p.L1243L	.	.	242	8	217	1	.	94
CADPS2	93664	bcgsc.ca	37	7	122153312	122153312	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CADPS2	NM_001167940	exon9	c.T1533C	p.V511V	.	.	64	4	280	1	.	94
CALCA	796	bcgsc.ca	37	11	14992696	14992696	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CALCA	NM_001033953	exon2	c.T43C	p.L15L	.	.	68	4	67	0	.	514
CAMK2N1	55450	bcgsc.ca	37	1	20811796	20811796	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CAMK2N1	NM_018584	exon1	c.C77T	p.S26F	.	.	36	4	43	0	.	93
CAPN8	388743	bcgsc.ca	37	1	223816436	223816436	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	.	.	.	.	.	.	95	4	89	0	.	.
CARD11	84433	broad.mit.edu	37	7	2984004	2984004	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CARD11	NM_032415	exon5	c.T526C	p.F176L	.	.	357	8	279	1	.	870
CASP6	839	bcgsc.ca	37	4	110617598	110617598	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CASP6	NM_001226	exon4	c.A275G	p.K92R	.	.	63	5	98	0	.	660
CASP7	840	bcgsc.ca	37	10	115457255	115457255	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CASP7	NM_001267057	exon2	c.G227A	p.W76X	.	.	69	4	109	0	.	660
CBFA2T3	863	bcgsc.ca	37	16	88958824	88958824	+	Missense_Mutation	SNP	T	T	C	rs201432438		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CBFA2T3	NM_005187	exon4	c.A449G	p.N150S	.	.	86	6	163	0	T|0.999;C|0.001	722
CCDC105	126402	bcgsc.ca	37	19	15124573	15124573	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CCDC105	NM_173482	exon2	c.A660G	p.S220S	.	.	82	5	60	0	.	91
CCDC114	93233	bcgsc.ca	37	19	48807272	48807272	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CCDC114	NM_144577	exon7	c.T680C	p.L227P	.	.	158	7	172	3	.	91
CCDC135	84229	bcgsc.ca	37	16	57756953	57756953	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CCDC135	NM_032269	exon11	c.G1448T	p.R483L	.	.	83	6	70	0	.	90
CCDC155	147872	bcgsc.ca	37	19	49898487	49898487	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CCDC155	NM_144688	exon4	c.T273C	p.T91T	.	.	50	4	57	0	.	69
CCDC171	203238	bcgsc.ca	37	9	15564114	15564114	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_173550	exon2	c.G28A	p.G10S	.	.	69	4	165	0	.	.
CCDC171	203238	bcgsc.ca	37	9	15723722	15723722	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_173550	exon13	c.A1469G	p.D490G	.	.	93	4	197	0	.	.
CCDC36	339834	bcgsc.ca	37	3	49274036	49274036	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CCDC36	NM_001135197	exon3	c.G112T	p.D38Y	.	.	307	10	417	1	.	92
CCDC43	124808	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	42756228	42756228	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_144609	exon5	c.G671C	p.R224P	.	.	400	157	465	0	.	.
CCDC83	220047	bcgsc.ca	37	11	85627207	85627207	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CCDC83	NM_173556	exon11	c.A1104G	p.E368E	.	.	143	5	214	0	.	91
CCDC88C	440193	bcgsc.ca	37	14	91745633	91745633	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CCDC88C	NM_001080414	exon28	c.T4717C	p.L1573L	.	.	76	4	125	0	.	25
CCNB3	85417	bcgsc.ca	37	X	50056941	50056941	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CCNB3	NM_033031	exon7	c.A3509G	p.E1170G	.	.	54	4	96	0	.	482
CCND1	595	bcgsc.ca	37	11	69462787	69462787	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CCND1	NM_053056	exon4	c.C600A	p.P200P	.	.	69	4	73	0	.	1270
CCT3	7203	bcgsc.ca	37	1	156280987	156280987	+	Splice_Site	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CCT3	NM_005998	exon13	c.1156-1G>A	.	.	.	85	4	106	0	.	92
CD163	9332	bcgsc.ca	37	12	7647879	7647879	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CD163	NM_203416	exon6	c.A1218G	p.E406E	.	.	82	4	292	0	.	98
CD163L1	283316	bcgsc.ca	37	12	7521985	7521985	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CD163L1	NM_174941	exon15	c.G4007A	p.G1336E	.	.	61	4	91	0	.	100
CD3EAP	10849	ucsc.edu;bcgsc.ca	37	19	45911586	45911586	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CD3EAP	NM_012099	exon3	c.T360C	p.G120G	.	.	56	6	48	0	.	156
CDC14B	8555	bcgsc.ca	37	9	99304110	99304110	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CDC14B	NM_033331	exon6	c.A562G	p.K188E	.	.	257	7	253	0	.	228
CDC42BPA	8476	bcgsc.ca	37	1	227335243	227335243	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CDC42BPA	NM_003607	exon7	c.T711C	p.A237A	.	.	119	5	103	0	.	549
CDC7	8317	bcgsc.ca	37	1	91980548	91980548	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CDC7	NM_001134419	exon9	c.T1091C	p.L364P	.	.	99	5	181	1	.	1125
CDCA3	83461	bcgsc.ca	37	12	6959756	6959756	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CDCA3	NM_031299	exon3	c.A125G	p.E42G	.	.	99	6	102	0	.	90
CDCA5	113130	bcgsc.ca	37	11	64847010	64847010	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CDCA5	NM_080668	exon5	c.T493C	p.C165R	.	.	70	5	68	0	.	90
CDHR4	389118	bcgsc.ca	37	3	49830312	49830312	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001007540	exon14	c.T1970C	p.V657A	.	.	209	8	232	0	.	.
CDK18	5129	bcgsc.ca	37	1	205497285	205497285	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CDK18	NM_212503	exon10	c.C1053A	p.P351P	.	.	125	5	76	0	.	521
CDK5RAP1	51654	bcgsc.ca	37	20	31973536	31973536	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CDK5RAP1	NM_016408	exon7	c.A796G	p.I266V	.	.	75	4	88	0	.	230
CEACAM18	729767	broad.mit.edu;bcgsc.ca;mdanderson.org	37	19	51984902	51984902	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CEACAM18	NM_001080405	exon4	c.T839G	p.I280S	.	.	99	32	91	0	.	23
CEMP1	752014	bcgsc.ca	37	16	2580979	2580979	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CEMP1	NM_001048212	exon1	c.T96C	p.P32P	.	.	75	4	56	0	.	23
CENPI	2491	bcgsc.ca	37	X	100381748	100381748	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CENPI	NM_006733	exon8	c.T738C	p.A246A	.	.	158	6	113	0	.	130
CEP192	55125	bcgsc.ca	37	18	13087613	13087613	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CEP192	NM_032142	exon32	c.T5961C	p.G1987G	.	.	51	5	68	0	.	27
CEP350	9857	bcgsc.ca	37	1	179961218	179961218	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CEP350	NM_014810	exon5	c.C257A	p.S86Y	.	.	209	6	165	0	.	26
CEP63	80254	bcgsc.ca	37	3	134267997	134267997	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CEP63	NM_025180	exon11	c.A1161G	p.E387E	.	.	236	8	260	2	.	493
CEP72	55722	bcgsc.ca	37	5	635657	635657	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CEP72	NM_018140	exon6	c.T862C	p.S288P	.	.	107	6	99	1	.	69
CERS6	253782	bcgsc.ca	37	2	169313116	169313116	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001256126	exon1	c.T158C	p.L53P	.	.	137	5	90	0	.	.
CGB2	114336	broad.mit.edu	37	19	49536324	49536324	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CGB2	NM_033378	exon3	c.G338A	p.R113H	.	.	142	46	200	0	.	68
CGRRF1	10668	bcgsc.ca	37	14	54996788	54996788	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CGRRF1	NM_006568	exon3	c.A266G	p.D89G	.	.	132	5	396	0	.	91
CHD1	1105	bcgsc.ca	37	5	98206496	98206496	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CHD1	NM_001270	exon28	c.T3873C	p.D1291D	.	.	131	5	170	1	.	274
CHD3	1107	bcgsc.ca	37	17	7804648	7804648	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CHD3	NM_001005271	exon20	c.G3384A	p.L1128L	.	.	48	4	69	0	.	228
CHD6	84181	bcgsc.ca	37	20	40120386	40120386	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CHD6	NM_032221	exon11	c.A1388G	p.E463G	.	.	66	5	135	0	.	238
CHL1	10752	bcgsc.ca	37	3	433401	433401	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CHL1	NM_001253388	exon21	c.A2835G	p.K945K	.	.	199	6	160	0	.	583
CHMP7	91782	bcgsc.ca	37	8	23117664	23117664	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CHMP7	NM_152272	exon10	c.C1128T	p.D376D	.	.	91	4	125	0	.	90
CHRNA4	1137	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	20	61981117	61981117	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CHRNA4	NM_000744	exon5	c.G1646C	p.R549P	.	.	30	15	43	0	.	91
CHRNA5	1138	bcgsc.ca	37	15	78882738	78882738	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CHRNA5	NM_000745	exon5	c.C1005A	p.I335I	.	.	128	5	210	0	.	516
CHUK	1147	bcgsc.ca	37	10	101969424	101969424	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CHUK	NM_001278	exon10	c.A1056G	p.Q352Q	.	.	81	4	80	0	.	961
CIDEA	1149	bcgsc.ca	37	18	12262856	12262856	+	Missense_Mutation	SNP	G	G	T	rs138278168	bycluster;alternate_allele	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CIDEA	NM_001279	exon2	c.G71T	p.R24L	.	.	131	5	205	0	G|1.000;A|0.000	91
CKMT2	1160	bcgsc.ca	37	5	80548571	80548571	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CKMT2	NM_001825	exon4	c.C210A	p.P70P	.	.	84	4	144	0	.	90
CLASRP	11129	ucsc.edu;bcgsc.ca	37	19	45555364	45555364	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CLASRP	NM_007056	exon3	c.C135T	p.G45G	.	.	33	4	46	0	.	154
CLCN1	1180	bcgsc.ca	37	7	143042656	143042656	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CLCN1	NM_000083	exon17	c.A1973G	p.Q658R	.	.	78	5	181	1	.	156
CLDN19	149461	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	43201511	43201511	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CLDN19	NM_001185117	exon3	c.C579A	p.H193Q	.	.	73	24	72	0	.	90
CLEC9A	283420	bcgsc.ca	37	12	10213843	10213843	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CLEC9A	NM_207345	exon6	c.A290G	p.Q97R	.	.	56	4	110	0	.	91
CLK3	1198	bcgsc.ca	37	15	74921306	74921306	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CLK3	NM_001130028	exon12	c.G1673T	p.G558V	.	.	98	6	132	0	.	358
CLN3	1201	bcgsc.ca	37	16	28488924	28488924	+	Silent	SNP	C	C	A	rs201206239	alternate_allele	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CLN3	NM_001042432	exon16	c.G1230T	p.A410A	.	.	68	5	67	0	C|0.999;T|0.001	90
CLPX	10845	bcgsc.ca	37	15	65448066	65448066	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CLPX	NM_006660	exon10	c.T1275C	p.G425G	.	.	165	6	281	0	.	90
CLSTN2	64084	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	140281020	140281020	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CLSTN2	NM_022131	exon13	c.A2082T	p.L694F	.	.	95	40	90	0	.	157
CLTB	1212	bcgsc.ca	37	5	175824700	175824700	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CLTB	NM_001834	exon4	c.G372T	p.T124T	.	.	163	5	162	0	.	90
CLTC	1213	bcgsc.ca	37	17	57760091	57760091	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CLTC	NM_004859	exon23	c.G3702T	p.L1234L	.	.	106	5	145	0	.	835
CMYA5	202333	bcgsc.ca	37	5	79028130	79028130	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CMYA5	NM_153610	exon2	c.A3542G	p.K1181R	.	.	79	4	147	0	.	77
CMYA5	202333	bcgsc.ca	37	5	79030148	79030148	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CMYA5	NM_153610	exon2	c.T5560C	p.F1854L	.	.	110	5	215	0	.	77
CNDP1	84735	bcgsc.ca	37	18	72244255	72244255	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CNDP1	NM_032649	exon8	c.C993A	p.F331L	.	.	83	4	137	0	.	90
CNKSR2	22866	bcgsc.ca	37	X	21534633	21534633	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CNKSR2	NM_001168647	exon9	c.G841T	p.A281S	.	.	70	5	202	0	.	625
CNOT6L	246175	bcgsc.ca	37	4	78678020	78678020	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CNOT6L	NM_144571	exon5	c.C486A	p.L162L	.	.	57	4	117	0	.	67
CNTNAP5	129684	bcgsc.ca	37	2	125547637	125547637	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CNTNAP5	NM_130773	exon18	c.G2908T	p.G970W	.	.	108	5	155	0	.	524
CNTROB	116840	bcgsc.ca	37	17	7839766	7839766	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CNTROB	NM_001037144	exon5	c.G677T	p.R226L	.	.	79	4	130	0	.	153
COG3	83548	bcgsc.ca	37	13	46093128	46093128	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	COG3	NM_031431	exon19	c.T2053C	p.S685P	.	.	74	4	80	0	.	154
COL11A2	1302	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	33144991	33144991	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	COL11A2	NM_080680	exon24	c.G1983T	p.G661G	.	.	63	16	65	0	.	95
COL12A1	1303	bcgsc.ca	37	6	75893571	75893571	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	COL12A1	NM_004370	exon9	c.G1287T	p.V429V	.	.	97	4	208	0	.	142
COL12A1	1303	bcgsc.ca	37	6	75899307	75899307	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	COL12A1	NM_004370	exon6	c.A619G	p.I207V	.	.	87	4	204	0	.	142
COL14A1	7373	bcgsc.ca	37	8	121282313	121282313	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	COL14A1	NM_021110	exon26	c.A3113G	p.D1038G	.	.	57	4	136	0	.	543
COL17A1	1308	bcgsc.ca	37	10	105795106	105795106	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	COL17A1	NM_000494	exon50	c.A3534G	p.G1178G	.	.	43	4	53	0	.	95
COL18A1	80781	ucsc.edu;bcgsc.ca	37	21	46888235	46888235	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	COL18A1	NM_030582	exon2	c.C726A	p.P242P	.	.	38	4	73	0	.	90
COL25A1	84570	bcgsc.ca	37	4	109746358	109746358	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	COL25A1	NM_198721	exon33	c.T1785C	p.G595G	.	.	115	5	255	0	.	92
COL27A1	85301	bcgsc.ca	37	9	117062385	117062385	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	COL27A1	NM_032888	exon50	c.A4620G	p.A1540A	.	.	64	5	53	0	.	94
COL4A5	1287	bcgsc.ca	37	X	107816803	107816803	+	Splice_Site	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	COL4A5	NM_033380	exon9	c.466-1G>T	.	.	.	192	6	194	0	.	133
COL5A1	1289	bcgsc.ca	37	9	137664658	137664658	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	COL5A1	NM_000093	exon26	c.C2309A	p.P770H	.	.	144	6	135	0	.	524
COL6A2	1292	ucsc.edu	37	21	47532449	47532449	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	COL6A2	NM_058175	exon3	c.C672A	p.T224T	.	.	42	4	77	0	.	515
COL6A3	1293	broad.mit.edu;bcgsc.ca	37	2	238280490	238280490	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	COL6A3	NM_004369	exon9	c.G4170A	p.S1390S	.	.	81	7	97	0	.	526
COL6A6	131873	bcgsc.ca	37	3	130286946	130286946	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	COL6A6	NM_001102608	exon5	c.A1899G	p.I633M	.	.	141	5	168	0	.	76
COLGALT2	23127	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	183938536	183938536	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_015101	exon5	c.C699A	p.P233P	.	.	145	85	156	0	.	.
COLGALT2	23127	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	183938539	183938539	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_015101	exon5	c.C696A	p.V232V	.	.	148	86	157	0	.	.
COMTD1	118881	bcgsc.ca	37	10	76994402	76994402	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	COMTD1	NM_144589	exon6	c.T602C	p.L201P	.	.	107	5	107	0	.	90
COPA	1314	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	160305090	160305090	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	COPA	NM_001098398	exon4	c.G251T	p.R84L	.	.	439	131	349	0	.	92
COPB2	9276	bcgsc.ca	37	3	139085506	139085506	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	COPB2	NM_004766	exon15	c.A1788G	p.T596T	.	.	102	5	212	0	.	92
COPS6	10980	bcgsc.ca	37	7	99687239	99687239	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	COPS6	NM_006833	exon3	c.G204T	p.V68V	.	.	101	5	170	0	.	658
COX6A1	1337	bcgsc.ca	37	12	120878267	120878267	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	COX6A1	NM_004373	exon3	c.G257T	p.W86L	.	.	194	7	281	0	.	90
CPED1	79974	bcgsc.ca	37	7	120764425	120764425	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001105533	exon7	c.C959A	p.P320H	.	.	62	4	156	0	.	.
CPNE8	144402	bcgsc.ca	37	12	39079332	39079332	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CPNE8	NM_153634	exon16	c.G1231A	p.G411R	.	.	142	5	253	0	.	91
CRIM1	51232	bcgsc.ca	37	2	36704192	36704192	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CRIM1	NM_016441	exon6	c.A1152G	p.G384G	.	.	119	5	143	0	.	118
CROT	54677	bcgsc.ca	37	7	86988547	86988547	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CROT	NM_001143935	exon5	c.A225G	p.E75E	.	.	167	6	227	1	.	280
CRTC3	64784	bcgsc.ca	37	15	91169153	91169153	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CRTC3	NM_022769	exon10	c.A895G	p.S299G	.	.	148	6	208	0	.	393
CSH1	1442	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	17	61972411	61972411	+	Missense_Mutation	SNP	G	G	T	rs61764004		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CSH1	NM_001317	exon5	c.C625A	p.R209S	.	.	185	85	270	0	G|0.993;T|0.007	92
CSMD3	114788	bcgsc.ca	37	8	113564886	113564886	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CSMD3	NM_198123	exon26	c.T4298C	p.F1433S	.	.	59	4	107	0	.	1132
CSPG4	1464	bcgsc.ca	37	15	75970101	75970101	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CSPG4	NM_001897	exon9	c.G5077T	p.A1693S	.	.	66	4	141	0	.	229
CSTF2T	23283	bcgsc.ca	37	10	53457813	53457813	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CSTF2T	NM_015235	exon1	c.A1497G	p.S499S	.	.	65	4	129	0	.	91
CTBP1	1487	bcgsc.ca	37	4	1232009	1232009	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CTBP1	NM_001328	exon2	c.T157C	p.F53L	.	.	123	5	116	0	.	91
CTDSPL2	51496	bcgsc.ca	37	15	44751229	44751229	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CTDSPL2	NM_016396	exon2	c.G17T	p.R6L	.	.	60	4	114	0	.	90
CTLA4	1493	bcgsc.ca	37	2	204735343	204735343	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CTLA4	NM_005214	exon2	c.C144A	p.A48A	.	.	98	5	139	0	.	90
CTNNB1	1499	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	41266110	41266110	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	CTNNB1,NS,carcinoma,0	CTNNB1	NM_001098209	exon3	c.A107C	p.H36P	.	.	134	54	251	0	.	24361
CTNND2	1501	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	11082847	11082847	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CTNND2	NM_001332	exon16	c.C2749T	p.R917W	.	.	115	44	172	0	.	293
CTSC	1075	bcgsc.ca	37	11	88029406	88029406	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CTSC	NM_001814	exon6	c.G784T	p.A262S	.	.	95	5	132	1	.	90
CTSS	1520	bcgsc.ca	37	1	150727582	150727582	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CTSS	NM_004079	exon4	c.C294A	p.P98P	.	.	236	7	195	0	.	90
CTTNBP2	83992	bcgsc.ca	37	7	117432137	117432137	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CTTNBP2	NM_033427	exon4	c.C1113A	p.P371P	.	.	120	5	196	0	.	94
CYLC1	1538	bcgsc.ca	37	X	83127898	83127898	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CYLC1	NM_021118	exon4	c.A182G	p.H61R	.	.	66	4	147	0	.	112
CYLD	1540	bcgsc.ca	37	16	50816317	50816317	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CYLD	NM_015247	exon12	c.G1766T	p.G589V	.	.	176	7	270	0	.	2444
CYP51A1	1595	bcgsc.ca	37	7	91746527	91746527	+	Splice_Site	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	CYP51A1	NM_000786	exon10	c.1183-1G>T	.	.	.	56	4	109	0	.	90
DAB2IP	153090	bcgsc.ca	37	9	124535054	124535054	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DAB2IP	NM_032552	exon12	c.G2163A	p.V721V	.	.	56	4	57	0	.	91
DAPP1	27071	bcgsc.ca	37	4	100761479	100761479	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DAPP1	NM_014395	exon3	c.A258G	p.E86E	.	.	64	4	96	0	.	93
DCHS1	8642	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	6643329	6643329	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DCHS1	NM_003737	exon21	c.G9578T	p.C3193F	.	.	86	30	112	0	.	73
DCP2	167227	bcgsc.ca	37	5	112349115	112349115	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DCP2	NM_152624	exon11	c.T1197C	p.F399F	.	.	73	4	100	0	.	90
DDB1	1642	bcgsc.ca	37	11	61083759	61083759	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DDB1	NM_001923	exon12	c.C1408A	p.Q470K	.	.	66	5	78	0	.	661
DDR2	4921	bcgsc.ca	37	1	162743260	162743260	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DDR2	NM_001014796	exon15	c.T1730C	p.V577A	.	.	82	4	90	0	.	1464
DDX26B	203522	bcgsc.ca	37	X	134681162	134681162	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DDX26B	NM_182540	exon6	c.A714G	p.T238T	.	.	125	5	205	0	.	226
DEFB134	613211	ucsc.edu;bcgsc.ca	37	8	11851595	11851595	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DEFB134	NM_001033019	exon2	c.G95T	p.C32F	.	.	47	4	99	0	.	90
DENND4B	9909	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	153913916	153913916	+	Silent	SNP	C	C	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DENND4B	NM_014856	exon7	c.G1056C	p.A352A	.	.	88	45	73	0	.	69
DENND4C	55667	bcgsc.ca	37	9	19352513	19352513	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DENND4C	NM_017925	exon25	c.G4484T	p.C1495F	.	.	88	5	160	0	.	92
DENND4C	55667	bcgsc.ca	37	9	19352523	19352523	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DENND4C	NM_017925	exon25	c.T4494C	p.C1498C	.	.	93	4	164	0	.	92
DHRS7B	25979	bcgsc.ca	37	17	21094442	21094442	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DHRS7B	NM_015510	exon7	c.A954G	p.K318K	.	.	168	6	301	0	.	91
DHRS7C	201140	bcgsc.ca	37	17	9680510	9680510	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001220493	exon4	c.T574C	p.Y192H	.	.	64	4	124	1	.	.
DHX32	55760	bcgsc.ca	37	10	127541201	127541201	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DHX32	NM_018180	exon5	c.C1103A	p.P368Q	.	.	88	4	137	0	.	290
DIABLO	56616	bcgsc.ca	37	12	122701092	122701092	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DIABLO	NM_019887	exon6	c.A466G	p.T156A	.	.	113	6	150	0	.	659
DIP2C	22982	bcgsc.ca	37	10	332238	332238	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DIP2C	NM_014974	exon34	c.C4094A	p.P1365Q	.	.	70	5	137	0	.	156
DMD	1756	bcgsc.ca	37	X	31198584	31198584	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DMD	NM_004006	exon69	c.A9989G	p.K3330R	.	.	131	5	158	0	.	265
DMD	1756	bcgsc.ca	37	X	31697592	31697592	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DMD	NM_004006	exon53	c.A7772G	p.E2591G	.	.	122	6	114	0	.	265
DMXL2	23312	bcgsc.ca	37	15	51768818	51768818	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DMXL2	NM_001174116	exon27	c.C6932A	p.A2311E	.	.	126	6	221	1	.	99
DMXL2	23312	bcgsc.ca	37	15	51791297	51791297	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DMXL2	NM_001174116	exon18	c.T4124C	p.I1375T	.	.	58	4	107	1	.	99
DMXL2	23312	bcgsc.ca	37	15	51868320	51868320	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DMXL2	NM_001174117	exon2	c.T146C	p.I49T	.	.	15	3	42	0	.	99
DMXL2	23312	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	51791589	51791589	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DMXL2	NM_001174116	exon18	c.G3832C	p.V1278L	.	.	86	51	140	0	.	99
DNA2	1763	bcgsc.ca	37	10	70229828	70229828	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001080449	exon2	c.A167G	p.Q56R	.	.	145	5	168	0	.	.
DNAH10	196385	bcgsc.ca	37	12	124293348	124293348	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DNAH10	NM_207437	exon18	c.T2638C	p.L880L	.	.	142	5	215	2	.	95
DNAH10	196385	broad.mit.edu;bcgsc.ca	37	12	124395185	124395185	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DNAH10	NM_207437	exon58	c.A9746G	p.D3249G	.	.	96	8	88	0	.	95
DNAH10	196385	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	124305198	124305198	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DNAH10	NM_207437	exon23	c.G3718T	p.A1240S	.	.	133	66	155	0	.	95
DNAH11	8701	bcgsc.ca	37	7	21598574	21598574	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DNAH11	.	.	.	.	.	.	70	4	193	0	.	146
DNAH14	127602	bcgsc.ca	37	1	225533861	225533861	+	Missense_Mutation	SNP	A	A	G	rs74147200		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DNAH14	NM_001373	exon68	c.A10597G	p.M3533V	.	.	180	6	237	0	A|0.978;G|0.022	23
DNAH17	8632	bcgsc.ca	37	17	76424699	76424699	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DNAH17	NM_173628	exon77	c.G12495T	p.T4165T	.	.	91	5	91	0	.	142
DNAH17	8632	bcgsc.ca	37	17	76497954	76497954	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DNAH17	NM_173628	exon34	c.T5192C	p.I1731T	.	.	91	5	83	0	.	142
DNAH2	146754	bcgsc.ca	37	17	7689978	7689978	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DNAH2	NM_020877	exon40	c.T6439C	p.S2147P	.	.	89	4	163	0	.	102
DNAH5	1767	bcgsc.ca	37	5	13763008	13763008	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DNAH5	NM_001369	exon60	c.A10104G	p.Q3368Q	.	.	61	4	82	1	.	182
DNAH5	1767	bcgsc.ca	37	5	13776567	13776567	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DNAH5	NM_001369	exon55	c.C9354A	p.P3118P	.	.	70	4	152	0	.	182
DNAH5	1767	bcgsc.ca	37	5	13900496	13900496	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DNAH5	NM_001369	exon15	c.A2078G	p.E693G	.	.	104	7	133	0	.	182
DNAH8	1769	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	6	38747836	38747836	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DNAH8	NM_001206927	exon15	c.A2134T	p.K712X	.	.	97	29	115	0	.	615
DNAH9	1770	ucsc.edu;bcgsc.ca	37	17	11535903	11535903	+	Splice_Site	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DNAH9	NM_001372	exon8	c.1519-1G>T	.	.	.	42	4	85	0	.	168
DNAJC3	5611	broad.mit.edu	37	13	96438286	96438286	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DNAJC3	NM_006260	exon10	c.C1169A	p.S390X	.	.	891	12	509	2	.	226
DNAJC8	22826	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	28536505	28536505	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DNAJC8	NM_014280	exon5	c.G377T	p.G126V	.	.	104	52	145	0	.	90
DNM3	26052	bcgsc.ca	37	1	172357751	172357751	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DNM3	NM_015569	exon20	c.C2324T	p.T775I	.	.	72	4	72	0	.	90
DOCK10	55619	bcgsc.ca	37	2	225637902	225637902	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DOCK10	NM_014689	exon53	c.T6176C	p.L2059P	.	.	85	4	106	0	.	92
DOCK10	55619	bcgsc.ca	37	2	225668893	225668893	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DOCK10	NM_014689	exon39	c.C4204A	p.Q1402K	.	.	70	4	217	0	.	92
DOCK1	1793	bcgsc.ca	37	10	128859945	128859945	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DOCK1	NM_001380	exon23	c.A2287G	p.K763E	.	.	79	4	102	0	.	698
DOCK1	1793	bcgsc.ca	37	10	129216722	129216722	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DOCK1	NM_001380	exon45	c.A4546G	p.S1516G	.	.	32	4	58	0	.	698
DOCK1	1793	bcgsc.ca	37	10	129224182	129224182	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DOCK1	NM_001380	exon47	c.C4758A	p.V1586V	.	.	74	4	130	0	.	698
DOCK2	1794	bcgsc.ca	37	5	169125428	169125428	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DOCK2	NM_004946	exon11	c.A1030G	p.K344E	.	.	205	6	429	1	.	97
DOCK3	1795	bcgsc.ca;mdanderson.org	37	3	51398052	51398052	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DOCK3	NM_004947	exon47	c.C4995T	p.T1665T	.	.	35	16	46	1	.	22
DOCK6	57572	ucsc.edu;bcgsc.ca	37	19	11363499	11363499	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DOCK6	NM_020812	exon3	c.C268A	p.R90R	.	.	50	4	114	0	.	93
DOCK9	23348	bcgsc.ca	37	13	99500861	99500861	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DOCK9	.	.	.	.	.	.	138	5	108	0	.	90
DPF3	8110	bcgsc.ca	37	14	73141029	73141029	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DPF3	NM_012074	exon8	c.T790C	p.F264L	.	.	66	4	166	0	.	1
DSG1	1828	bcgsc.ca	37	18	28919760	28919760	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DSG1	NM_001942	exon11	c.G1459T	p.G487C	.	.	141	6	196	0	.	519
DST	667	bcgsc.ca	37	6	56346870	56346870	+	Missense_Mutation	SNP	C	C	T	rs201690182		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DST	NM_015548	exon71	c.G13640A	p.R4547Q	.	.	54	4	60	0	.	523
DTL	51514	bcgsc.ca	37	1	212273769	212273769	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DTL	NM_016448	exon14	c.C1437A	p.P479P	.	.	83	4	122	0	.	22
DTNA	1837	bcgsc.ca	37	18	32345972	32345972	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DTNA	NM_001390	exon2	c.T115C	p.C39R	.	.	69	4	158	0	.	153
DTWD1	56986	bcgsc.ca	37	15	49935700	49935700	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DTWD1	NM_001144955	exon5	c.C840A	p.F280L	.	.	87	4	321	3	.	226
DYDC2	84332	bcgsc.ca	37	10	82126614	82126614	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	DYDC2	NM_001270042	exon4	c.G483T	p.Q161H	.	.	61	4	111	0	.	90
ECE2	9718	bcgsc.ca	37	3	184008365	184008365	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ECE2	NM_014693	exon15	c.C2030T	p.T677I	.	.	150	5	170	0	.	94
ECHDC1	55862	bcgsc.ca	37	6	127648178	127648178	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ECHDC1	NM_001139510	exon3	c.T350C	p.L117P	.	.	81	4	108	0	.	90
EFCAB6	64800	bcgsc.ca	37	22	44151696	44151696	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	EFCAB6	NM_022785	exon6	c.A457G	p.M153V	.	.	164	5	261	0	.	97
EGR3	1960	bcgsc.ca	37	8	22548105	22548105	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	EGR3	NM_004430	exon2	c.A1045G	p.K349E	.	.	63	4	110	0	.	90
EIF2AK3	9451	bcgsc.ca	37	2	88913300	88913300	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	EIF2AK3	NM_004836	exon2	c.A380G	p.Q127R	.	.	73	4	83	0	.	361
EIF2AK3	9451	bcgsc.ca	37	2	88926529	88926529	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	EIF2AK3	NM_004836	exon1	c.G264T	p.R88R	.	.	25	4	23	0	.	361
EIF2AK4	440275	bcgsc.ca	37	15	40314780	40314780	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	EIF2AK4	NM_001013703	exon32	c.T4363C	p.S1455P	.	.	144	5	215	0	.	757
EIF2B3	8891	bcgsc.ca	37	1	45444054	45444054	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	EIF2B3	NM_020365	exon3	c.T227C	p.V76A	.	.	146	5	202	0	.	92
EIF2B5	8893	bcgsc.ca	37	3	183862407	183862407	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	EIF2B5	NM_003907	exon15	c.T2018C	p.L673P	.	.	148	5	141	0	.	95
EIF3A	8661	bcgsc.ca	37	10	120818890	120818890	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	EIF3A	NM_003750	exon11	c.C1463A	p.S488Y	.	.	73	4	121	0	.	226
ENGASE	64772	bcgsc.ca	37	17	77082172	77082172	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ENGASE	NM_001042573	exon14	c.T1973C	p.V658A	.	.	48	4	70	0	.	91
ENPP1	5167	bcgsc.ca	37	6	132168985	132168985	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ENPP1	NM_006208	exon2	c.G310A	p.E104K	.	.	58	4	52	0	.	95
ENTHD1	150350	bcgsc.ca	37	22	40283750	40283750	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ENTHD1	NM_152512	exon2	c.G3A	p.M1I	.	.	81	4	98	0	.	93
ENTPD1	953	bcgsc.ca	37	10	97471749	97471749	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ENTPD1	NM_001098175	exon1	c.G36T	p.K12N	.	.	83	4	121	0	.	93
EPB41L2	2037	bcgsc.ca	37	6	131190796	131190796	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	EPB41L2	NM_001431	exon15	c.G2514T	p.M838I	.	.	231	7	331	0	.	91
EPHA2	1969	bcgsc.ca	37	1	16458722	16458722	+	Missense_Mutation	SNP	C	C	A	rs116506614	byfrequency;alternate_allele	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	EPHA2	NM_004431	exon13	c.G2162T	p.R721L	.	.	87	5	129	0	C|0.999;T|0.001	1419
EPHA3	2042	bcgsc.ca	37	3	89259558	89259558	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	EPHA3	NM_005233	exon3	c.T702C	p.S234S	.	.	85	4	168	0	.	1500
ERBB2IP	55914	bcgsc.ca	37	5	65372229	65372229	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ERBB2IP	NM_001253699	exon24	c.A4070G	p.D1357G	.	.	161	5	154	0	.	653
ERCC6L2	375748	bcgsc.ca	37	9	98643202	98643202	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001010895	exon2	c.A131G	p.K44R	.	.	226	7	252	0	.	.
ERMP1	79956	broad.mit.edu	37	9	5797866	5797866	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ERMP1	NM_024896	exon13	c.C2337A	p.S779S	.	.	165	6	249	0	.	69
ESRRA	2101	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	64082291	64082291	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ESRRA	NM_004451	exon5	c.G650T	p.G217V	.	.	60	31	59	0	.	90
ESYT2	57488	bcgsc.ca	37	7	158590690	158590690	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ESYT2	NM_020728	exon3	c.G594T	p.R198R	.	.	94	6	150	0	.	92
ETNK1	55500	bcgsc.ca	37	12	22824271	22824271	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ETNK1	NM_018638	exon5	c.C1033A	p.H345N	.	.	165	6	212	0	.	115
ETV7	51513	bcgsc.ca	37	6	36336812	36336812	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ETV7	NM_001207035	exon6	c.T701C	p.L234P	.	.	88	5	102	0	.	415
EXOC3L4	91828	bcgsc.ca	37	14	103570622	103570622	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	EXOC3L4	NM_001077594	exon4	c.T1180C	p.F394L	.	.	62	4	79	1	.	23
EZH2	2146	bcgsc.ca	37	7	148511167	148511167	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	EZH2	NM_004456	exon15	c.T1735C	p.Y579H	.	.	60	4	137	0	.	3699
F11	2160	bcgsc.ca	37	4	187207603	187207603	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	F11	NM_000128	exon13	c.A1515G	p.G505G	.	.	46	4	69	0	.	90
F5	2153	bcgsc.ca	37	1	169511478	169511478	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	F5	NM_000130	exon13	c.T2850C	p.A950A	.	.	82	4	148	0	.	157
F5	2153	bcgsc.ca	37	1	169512194	169512194	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	F5	NM_000130	exon13	c.C2134A	p.R712S	.	.	126	5	174	0	.	157
FAM135A	57579	bcgsc.ca	37	6	71235934	71235934	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FAM135A	NM_001162529	exon13	c.G3147T	p.T1049T	.	.	129	5	144	0	.	90
FAM149B1	317662	bcgsc.ca	37	10	74992743	74992743	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_173348	exon10	c.C1174A	p.L392I	.	.	74	4	126	0	.	.
FAM172A	83989	bcgsc.ca	37	5	93294608	93294608	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FAM172A	NM_032042	exon6	c.A441G	p.P147P	.	.	161	5	338	1	.	90
FAM184B	27146	bcgsc.ca	37	4	17690049	17690049	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FAM184B	NM_015688	exon7	c.C1594A	p.Q532K	.	.	150	6	212	0	.	23
FAM193B	54540	bcgsc.ca	37	5	176951724	176951724	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001190946	exon6	c.A1758G	p.R586R	.	.	104	6	116	0	.	.
FAM208B	54906	bcgsc.ca	37	10	5790001	5790001	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_017782	exon15	c.T4617C	p.S1539S	.	.	179	6	118	0	.	.
FAM213B	127281	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	2520399	2520399	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001195736	exon6	c.C643G	p.P215A	.	.	88	41	108	0	.	.
FAM227A	646851	bcgsc.ca	37	22	39001273	39001273	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001013647	exon13	c.A1207G	p.M403V	.	.	128	5	150	1	.	.
FAM228B	375190	bcgsc.ca	37	2	24387100	24387100	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	.	.	.	.	.	.	181	6	134	0	.	.
FAM81B	153643	bcgsc.ca	37	5	94785929	94785929	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FAM81B	NM_152548	exon10	c.A1302G	p.K434K	.	.	207	6	413	1	.	92
FANCI	55215	bcgsc.ca	37	15	89807769	89807769	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FANCI	NM_001113378	exon9	c.T686C	p.V229A	.	.	69	4	136	0	.	92
FAT1	2195	bcgsc.ca	37	4	187521468	187521468	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FAT1	NM_005245	exon22	c.C11687A	p.P3896H	.	.	194	6	297	0	.	34
FAT2	2196	bcgsc.ca	37	5	150900873	150900873	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FAT2	NM_001447	exon18	c.C11281A	p.P3761T	.	.	66	4	63	0	.	96
FAT4	79633	bcgsc.ca	37	4	126240097	126240097	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FAT4	NM_024582	exon1	c.T2531C	p.V844A	.	.	55	4	116	0	.	108
FAT4	79633	bcgsc.ca	37	4	126389946	126389946	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FAT4	NM_024582	exon11	c.A12179G	p.H4060R	.	.	168	5	272	2	.	108
FBLN1	2192	bcgsc.ca	37	22	45898239	45898239	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FBLN1	.	.	.	.	.	.	28	5	32	0	.	515
FBN2	2201	bcgsc.ca	37	5	127607786	127607786	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FBN2	NM_001999	exon62	c.A7865G	p.H2622R	.	.	65	4	114	1	.	146
FBN2	2201	bcgsc.ca	37	5	127637095	127637095	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FBN2	NM_001999	exon47	c.C6025A	p.P2009T	.	.	94	6	81	0	.	146
FBN2	2201	bcgsc.ca	37	5	127647590	127647590	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FBN2	NM_001999	exon38	c.A4935G	p.T1645T	.	.	90	4	142	0	.	146
FBN3	84467	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	8186181	8186181	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FBN3	NM_032447	exon24	c.G3172T	p.G1058C	.	.	75	42	137	0	.	100
FBXO10	26267	bcgsc.ca	37	9	37529206	37529206	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FBXO10	NM_012166	exon5	c.G1621T	p.G541W	.	.	245	9	165	0	.	637
FBXO28	23219	bcgsc.ca	37	1	224321818	224321818	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FBXO28	NM_001136115	exon3	c.A420G	p.A140A	.	.	67	4	39	0	.	661
FBXO4	26272	bcgsc.ca	37	5	41934241	41934241	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FBXO4	NM_033484	exon5	c.A729G	p.E243E	.	.	89	4	155	0	.	227
FBXW4	6468	broad.mit.edu;bcgsc.ca	37	10	103371084	103371084	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FBXW4	NM_022039	exon9	c.T1203C	p.S401S	.	.	117	7	155	0	.	226
FCHO2	115548	bcgsc.ca	37	5	72377681	72377681	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FCHO2	NM_138782	exon23	c.A2052G	p.T684T	.	.	128	5	178	0	.	23
FECH	2235	bcgsc.ca	37	18	55222186	55222186	+	Splice_Site	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FECH	NM_000140	exon9	c.805-2A>G	.	.	.	45	4	65	0	.	90
FGD3	89846	bcgsc.ca	37	9	95738990	95738990	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FGD3	NM_001083536	exon3	c.A452G	p.Q151R	.	.	86	5	98	0	.	228
FGF3	2248	bcgsc.ca	37	11	69631164	69631164	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FGF3	NM_005247	exon2	c.T248C	p.V83A	.	.	113	6	107	0	.	847
FGFR3	2261	ucsc.edu	37	4	1801191	1801191	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FGFR3	NM_001163213	exon3	c.A320G	p.Y107C	.	.	31	4	42	0	.	9542
FHOD1	29109	bcgsc.ca	37	16	67265346	67265346	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FHOD1	NM_013241	exon16	c.T2492C	p.L831P	.	.	114	5	104	0	.	221
FIGNL1	63979	bcgsc.ca	37	7	50513447	50513447	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FIGNL1	NM_001042762	exon4	c.G1539A	p.E513E	.	.	70	4	64	0	.	93
FILIP1L	11259	bcgsc.ca	37	3	99568592	99568592	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FILIP1L	NM_182909	exon5	c.A1928G	p.K643R	.	.	146	7	230	0	.	45
FKBP9	11328	bcgsc.ca	37	7	33014969	33014969	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FKBP9	NM_007270	exon3	c.T543C	p.T181T	.	.	61	4	113	0	.	651
FLAD1	80308	bcgsc.ca	37	1	154956198	154956198	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FLAD1	NM_025207	exon1	c.T28C	p.F10L	.	.	66	4	62	0	.	93
FLJ33360	0	bcgsc.ca	37	5	6337401	6337401	+	RNA	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	.	.	.	.	.	.	22	3	39	0	.	.
FLOT2	2319	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	27210165	27210165	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FLOT2	NM_004475	exon4	c.G307A	p.V103I	.	.	54	28	50	1	.	522
FMN1	342184	bcgsc.ca	37	15	33359658	33359658	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FMN1	NM_001103184	exon1	c.A428G	p.H143R	.	.	68	4	130	0	.	23
FMN2	56776	bcgsc.ca	37	1	240371319	240371319	+	Silent	SNP	A	A	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FMN2	NM_020066	exon5	c.A3207T	p.L1069L	.	.	66	13	115	8	.	145
FMO4	2329	bcgsc.ca	37	1	171289001	171289001	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FMO4	NM_002022	exon3	c.A37G	p.S13G	.	.	98	5	202	0	.	537
FN1	2335	bcgsc.ca	37	2	216262474	216262474	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FN1	NM_212476	exon22	c.A3446G	p.Y1149C	.	.	156	6	343	0	.	584
FNDC3B	64778	bcgsc.ca	37	3	172050932	172050932	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FNDC3B	NM_001135095	exon14	c.A1608G	p.K536K	.	.	127	6	124	0	.	155
FOXI2	399823	bcgsc.ca	37	10	129536042	129536042	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FOXI2	NM_207426	exon1	c.G505T	p.D169Y	.	.	52	4	45	0	.	68
FOXK1	221937	bcgsc.ca	37	7	4799119	4799119	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FOXK1	NM_001037165	exon7	c.C1589A	p.T530K	.	.	62	4	54	0	.	516
FOXP1	27086	bcgsc.ca	37	3	71026858	71026858	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FOXP1	NM_001244815	exon11	c.A1370G	p.N457S	.	.	218	6	245	1	.	415
FPGT	8790	bcgsc.ca	37	1	74665428	74665428	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FPGT	NM_001199329	exon2	c.C163A	p.Q55K	.	.	152	6	116	2	.	91
FPGT-TNNI3K	100526835	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	74957805	74957805	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001112808	exon25	c.A2509T	p.S837C	.	.	92	16	284	0	.	.
FRMD3	257019	bcgsc.ca	37	9	85964620	85964620	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	FRMD3,brain,glioma,-2	FRMD3	NM_174938	exon4	c.C348A	p.P116P	.	.	101	5	100	0	.	91
FUT10	84750	bcgsc.ca	37	8	33230270	33230270	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FUT10	NM_032664	exon5	c.A1265G	p.E422G	.	.	73	4	262	2	.	92
FYB	2533	bcgsc.ca	37	5	39134341	39134341	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	FYB	NM_001243093	exon9	c.G1816T	p.D606Y	.	.	96	4	142	0	.	24
GABPA	2551	bcgsc.ca	37	21	27137017	27137017	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GABPA	NM_001197297	exon9	c.A1055G	p.Q352R	.	.	45	4	302	0	.	227
GALNT8	26290	bcgsc.ca	37	12	4853709	4853709	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GALNT8	NM_017417	exon4	c.A703G	p.K235E	.	.	44	4	79	0	.	230
GALR1	2587	bcgsc.ca	37	18	74968174	74968174	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GALR1	NM_001480	exon2	c.A727G	p.K243E	.	.	86	4	84	0	.	522
GALT	2592	ucsc.edu;bcgsc.ca	37	9	34649406	34649406	+	Splice_Site	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GALT	NM_000155	exon10	c.905-1G>T	.	.	.	42	4	62	0	.	90
GAPDHS	26330	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	36033250	36033250	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GAPDHS	NM_014364	exon5	c.C479A	p.A160D	.	.	64	29	76	0	.	226
GBA	2629	bcgsc.ca	37	1	155206189	155206189	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GBA	NM_001005742	exon9	c.T1071C	p.A357A	.	.	183	7	168	1	.	92
GEMIN5	25929	bcgsc.ca	37	5	154267927	154267927	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GEMIN5	NM_015465	exon28	c.T4370C	p.F1457S	.	.	134	6	153	0	.	228
GHRL	51738	bcgsc.ca	37	3	10328479	10328479	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GHRL	NM_016362	exon4	c.T243C	p.D81D	.	.	58	4	84	0	.	91
GJA9	81025	bcgsc.ca	37	1	39341448	39341448	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GJA9	NM_030772	exon2	c.A323G	p.Q108R	.	.	159	6	168	1	.	22
GLE1	2733	bcgsc.ca	37	9	131285608	131285608	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GLE1	NM_001499	exon5	c.C631T	p.H211Y	.	.	148	5	145	0	.	22
GLRB	2743	bcgsc.ca	37	4	158065064	158065064	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GLRB	NM_000824	exon8	c.T857C	p.L286P	.	.	68	4	215	0	.	92
GLTSCR2	29997	ucsc.edu;bcgsc.ca	37	19	48255773	48255773	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GLTSCR2	NM_015710	exon6	c.C674T	p.P225L	.	.	36	4	36	0	.	514
GNAT1	2779	bcgsc.ca	37	3	50230570	50230570	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GNAT1	NM_144499	exon2	c.C111T	p.A37A	.	.	69	4	70	0	.	417
GNAT3	346562	bcgsc.ca	37	7	80088064	80088064	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GNAT3	NM_001102386	exon8	c.C988A	p.Q330K	.	.	81	5	148	0	.	23
GOLGA2P5	55592	broad.mit.edu;ucsc.edu	37	12	100560362	100560362	+	RNA	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	.	.	.	.	.	.	20	11	35	0	.	.
GOLGA3	2802	bcgsc.ca	37	12	133365644	133365644	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GOLGA3	NM_001172557	exon13	c.A2780G	p.K927R	.	.	65	4	103	2	.	95
GPR101	83550	bcgsc.ca	37	X	136113115	136113115	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GPR101	NM_054021	exon1	c.A719G	p.D240G	.	.	166	5	148	0	.	134
GPR111	222611	bcgsc.ca	37	6	47649005	47649005	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GPR111	NM_153839	exon7	c.A506G	p.Y169C	.	.	89	4	94	0	.	91
GPR116	221395	bcgsc.ca	37	6	46847707	46847707	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GPR116	NM_015234	exon9	c.A884G	p.K295R	.	.	86	4	232	0	.	91
GPR158	57512	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	25883311	25883311	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GPR158	NM_020752	exon9	c.G1983T	p.L661F	.	.	79	17	141	2	.	141
GPR173	54328	bcgsc.ca	37	X	53106347	53106347	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GPR173	NM_018969	exon2	c.A544G	p.K182E	.	.	65	4	54	0	.	130
GPR180	160897	broad.mit.edu;bcgsc.ca	37	13	95257737	95257737	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GPR180	NM_180989	exon2	c.C238A	p.L80I	.	.	298	14	208	0	.	153
GPR35	2859	bcgsc.ca	37	2	241569927	241569927	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GPR35	NM_001195382	exon6	c.G651T	p.V217V	.	.	84	4	86	0	.	93
GPR98	84059	bcgsc.ca	37	5	89939676	89939676	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GPR98	NM_032119	exon14	c.G2610T	p.L870F	.	.	107	7	159	0	.	103
GPR98	84059	bcgsc.ca	37	5	90079826	90079826	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GPR98	NM_032119	exon67	c.T13605C	p.I4535I	.	.	70	4	169	1	.	103
GPRASP1	9737	bcgsc.ca	37	X	101911607	101911607	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GPRASP1	NM_001099411	exon3	c.A2766G	p.G922G	.	.	71	5	61	0	.	131
GPT	2875	bcgsc.ca	37	8	145731972	145731972	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GPT	NM_005309	exon9	c.C1220A	p.P407Q	.	.	64	4	61	0	.	91
GRAMD3	65983	bcgsc.ca	37	5	125808983	125808983	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GRAMD3	NM_001146319	exon5	c.A454G	p.I152V	.	.	289	7	326	0	.	90
GRB10	2887	bcgsc.ca	37	7	50682507	50682507	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GRB10	NM_005311	exon9	c.A1055G	p.K352R	.	.	68	4	41	0	.	1272
GREB1L	80000	bcgsc.ca	37	18	19088467	19088467	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001142966	exon27	c.A4650G	p.K1550K	.	.	61	4	103	0	.	.
GRIK3	2899	bcgsc.ca	37	1	37282745	37282745	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GRIK3	NM_000831	exon13	c.C2007A	p.P669P	.	.	213	6	276	2	.	158
GRIN1	2902	bcgsc.ca	37	9	140057390	140057390	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GRIN1	NM_001185091	exon16	c.G2169A	p.M723I	.	.	60	4	40	0	.	187
GRIN2B	2904	ucsc.edu;bcgsc.ca	37	12	13906561	13906561	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GRIN2B	NM_000834	exon3	c.A700G	p.K234E	.	.	43	4	80	0	.	231
GRIN3A	116443	ucsc.edu;bcgsc.ca	37	9	104433345	104433345	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GRIN3A	NM_133445	exon3	c.G1349T	p.R450I	.	.	43	4	185	0	.	96
GRM6	2916	bcgsc.ca	37	5	178410113	178410113	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GRM6	NM_000843	exon9	c.A2234G	p.D745G	.	.	62	5	87	0	.	588
GSG2	83903	ucsc.edu;bcgsc.ca	37	17	3627867	3627867	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GSG2	NM_031965	exon1	c.A638G	p.D213G	.	.	53	6	104	0	.	297
GTPBP10	85865	bcgsc.ca	37	7	90014411	90014411	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GTPBP10	NM_033107	exon10	c.T1107C	p.S369S	.	.	58	4	114	0	.	68
GUCY2F	2986	bcgsc.ca	37	X	108695280	108695280	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GUCY2F	NM_001522	exon5	c.T1444C	p.S482P	.	.	211	7	354	2	.	540
GUCY2F	2986	bcgsc.ca	37	X	108708542	108708542	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	GUCY2F	NM_001522	exon3	c.T861C	p.S287S	.	.	128	5	124	0	.	540
H6PD	9563	bcgsc.ca	37	1	9323973	9323973	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	H6PD	NM_004285	exon5	c.T1421C	p.I474T	.	.	68	4	94	0	.	90
HCFC2	29915	bcgsc.ca	37	12	104480643	104480643	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	HCFC2	NM_013320	exon8	c.C1082T	p.S361F	.	.	74	4	124	0	.	92
HCK	3055	bcgsc.ca	37	20	30674575	30674575	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	HCK	NM_002110	exon9	c.A980G	p.E327G	.	.	61	4	71	0	.	948
HCN1	348980	bcgsc.ca	37	5	45267277	45267277	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	HCN1	NM_021072	exon7	c.T1697C	p.V566A	.	.	93	4	136	1	.	91
HDAC6	10013	bcgsc.ca	37	X	48674669	48674669	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	HDAC6	NM_006044	exon18	c.T1615C	p.C539R	.	.	44	4	45	0	.	230
HEATR8-TTC4	0	bcgsc.ca	37	1	55165877	55165877	+	RNA	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	.	.	.	.	.	.	165	5	179	0	.	.
HECA	51696	bcgsc.ca	37	6	139488266	139488266	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	HECA	NM_016217	exon2	c.C1117A	p.Q373K	.	.	60	5	69	0	.	90
HELLS	3070	bcgsc.ca	37	10	96348141	96348141	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	HELLS	NM_018063	exon13	c.C1482A	p.S494S	.	.	144	5	129	1	.	92
HELZ2	85441	bcgsc.ca	37	20	62203551	62203551	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001037335	exon2	c.A188G	p.E63G	.	.	70	4	66	0	.	.
HERC1	8925	bcgsc.ca	37	15	63986274	63986274	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	HERC1	NM_003922	exon30	c.C5563A	p.Q1855K	.	.	152	5	333	0	.	666
HERC2	8924	bcgsc.ca	37	15	28499522	28499522	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	HERC2	NM_004667	exon20	c.G3014A	p.C1005Y	.	.	59	4	145	0	.	234
HEXIM2	124790	ucsc.edu;bcgsc.ca	37	17	43240204	43240204	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	HEXIM2	NM_144608	exon3	c.C44A	p.P15Q	.	.	36	4	34	0	.	90
HEYL	26508	bcgsc.ca	37	1	40092517	40092517	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	HEYL	NM_014571	exon5	c.C649A	p.L217I	.	.	139	6	153	0	.	91
HHEX	3087	bcgsc.ca	37	10	94454330	94454330	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	HHEX	NM_002729	exon4	c.A618G	p.E206E	.	.	86	4	131	0	.	227
HIAT1	64645	bcgsc.ca	37	1	100546056	100546056	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	HIAT1	NM_033055	exon11	c.C1107A	p.V369V	.	.	93	4	152	0	.	90
HIP1R	9026	bcgsc.ca	37	12	123346019	123346019	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	HIP1R	NM_003959	exon31	c.C3117A	p.P1039P	.	.	81	6	116	0	.	91
HMGCLL1	54511	bcgsc.ca	37	6	55364052	55364052	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	HMGCLL1	NM_019036	exon7	c.A678G	p.T226T	.	.	139	5	250	1	.	94
HMGXB3	22993	bcgsc.ca	37	5	149398193	149398193	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	HMGXB3	NM_014983	exon6	c.T974C	p.V325A	.	.	97	6	113	1	.	24
HPGD	3248	bcgsc.ca	37	4	175413180	175413180	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	HPGD	NM_000860	exon7	c.T728C	p.M243T	.	.	73	4	211	0	.	90
HPN	3249	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	35556780	35556780	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	HPN	NM_182983	exon12	c.C1059T	p.S353S	.	.	111	53	105	0	.	515
HS6ST3	266722	bcgsc.ca	37	13	97484770	97484770	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	HS6ST3	NM_153456	exon2	c.G734T	p.R245L	.	.	67	4	46	0	.	92
HSD11B2	3291	bcgsc.ca	37	16	67469601	67469601	+	Silent	SNP	C	C	A	rs147780776	alternate_allele	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	HSD11B2	NM_000196	exon2	c.C336A	p.T112T	.	.	68	5	65	0	C|1.000;T|0.000	90
HSF2	3298	bcgsc.ca	37	6	122734744	122734744	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	HSF2	NM_004506	exon4	c.G405T	p.K135N	.	.	277	7	418	0	.	90
HSPA12B	116835	bcgsc.ca	37	20	3730636	3730636	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	HSPA12B	NM_052970	exon11	c.G1063T	p.G355C	.	.	62	4	56	0	.	226
HSPA8	3312	bcgsc.ca	37	11	122929371	122929371	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	HSPA8	NM_006597	exon7	c.A1491G	p.K497K	.	.	121	6	111	0	.	654
HTATSF1	27336	bcgsc.ca	37	X	135579939	135579939	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	HTATSF1	NM_001163280	exon2	c.C96A	p.T32T	.	.	111	7	78	0	.	132
HTN3	3347	bcgsc.ca	37	4	70897798	70897798	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	HTN3	NM_000200	exon4	c.C76T	p.H26Y	.	.	255	7	847	1	.	92
HTR7	3363	bcgsc.ca	37	10	92508989	92508989	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	HTR7	NM_019860	exon2	c.A902G	p.E301G	.	.	62	4	156	1	.	91
HYDIN	54768	bcgsc.ca	37	16	70897054	70897054	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	HYDIN	NM_001270974	exon68	c.C11503T	p.L3835L	.	.	70	4	67	0	.	92
ICK	22858	bcgsc.ca	37	6	52876902	52876902	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ICK	NM_016513	exon11	c.T1276C	p.F426L	.	.	79	4	146	0	.	421
IDH2	3418	ucsc.edu;bcgsc.ca	37	15	90628327	90628327	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	IDH2	NM_002168	exon9	c.C1084T	p.R362W	.	.	28	4	58	0	.	15118
IFIH1	64135	bcgsc.ca	37	2	163128888	163128888	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	IFIH1	NM_022168	exon13	c.C2464A	p.R822R	.	.	142	5	236	1	.	91
IFIT3	3437	ucsc.edu;bcgsc.ca	37	10	91099876	91099876	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	IFIT3	NM_001549	exon2	c.A1464G	p.Q488Q	.	.	37	4	74	0	.	90
IFNA2	3440	ucsc.edu;bcgsc.ca	37	9	21385252	21385252	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	IFNA2	NM_000605	exon1	c.T77C	p.L26P	.	.	42	4	159	0	.	153
IFNLR1	163702	bcgsc.ca	37	1	24483900	24483900	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_170743	exon7	c.C1283A	p.P428H	.	.	72	4	57	0	.	.
IGLL3P	91353	bcgsc.ca	37	22	25714261	25714261	+	RNA	SNP	G	G	A	rs61730270	bycluster;byfrequency	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	IGLL3P	.	.	.	.	.	.	167	11	208	4	G|0.994;A|0.006	91
IL13RA1	3597	bcgsc.ca	37	X	117875118	117875118	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	IL13RA1	NM_001560	exon2	c.A227G	p.K76R	.	.	60	5	71	0	.	554
IL17RA	23765	ucsc.edu;bcgsc.ca	37	22	17585699	17585699	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	IL17RA	NM_014339	exon9	c.A930G	p.P310P	.	.	38	4	40	1	.	92
IL1F10	84639	bcgsc.ca	37	2	113830318	113830318	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	IL1F10	NM_173161	exon2	c.G3A	p.M1I	.	.	67	4	79	0	.	91
IL21R	50615	broad.mit.edu;bcgsc.ca	37	16	27454318	27454318	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	IL21R	NM_181079	exon6	c.T454C	p.F152L	.	.	129	8	178	1	.	660
INTS1	26173	bcgsc.ca	37	7	1519138	1519138	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001080453	exon31	c.T4257C	p.G1419G	.	.	53	4	49	0	.	.
IPO8	10526	bcgsc.ca	37	12	30818738	30818738	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	IPO8	NM_006390	exon12	c.A1263G	p.T421T	.	.	212	6	244	3	.	227
IQGAP1	8826	bcgsc.ca	37	15	91038029	91038029	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	IQGAP1	NM_003870	exon36	c.A4713G	p.K1571K	.	.	195	7	331	1	.	950
IQSEC3	440073	bcgsc.ca	37	12	274984	274984	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	IQSEC3	NM_001170738	exon11	c.A2899G	p.M967V	.	.	74	5	127	0	.	560
IQUB	154865	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	123143008	123143008	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	IQUB	NM_178827	exon5	c.G857A	p.R286K	.	.	77	48	176	1	.	156
IRAK1	3654	bcgsc.ca	37	X	153278640	153278640	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	IRAK1	NM_001569	exon12	c.T1784C	p.L595P	.	.	61	5	48	0	.	1074
IRAK1	3654	bcgsc.ca	37	X	153279600	153279600	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	IRAK1	NM_001569	exon11	c.C1432A	p.L478M	.	.	118	7	74	0	.	1074
IRGQ	126298	ucsc.edu;bcgsc.ca	37	19	44099395	44099395	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	IRGQ	NM_001007561	exon2	c.G96A	p.V32V	.	.	45	4	42	0	.	92
ITGA1	3672	bcgsc.ca	37	5	52218688	52218688	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ITGA1	NM_181501	exon18	c.G2374T	p.D792Y	.	.	63	4	104	0	.	228
ITGA2	3673	ucsc.edu;bcgsc.ca	37	5	52353865	52353865	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ITGA2	NM_002203	exon10	c.A1107G	p.Q369Q	.	.	31	4	145	0	.	226
ITGA4	3676	bcgsc.ca	37	2	182388171	182388171	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ITGA4	NM_000885	exon19	c.A2081G	p.K694R	.	.	159	5	232	0	.	230
ITGAV	3685	bcgsc.ca	37	2	187506146	187506146	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ITGAV	NM_002210	exon12	c.C990T	p.F330F	.	.	403	9	309	1	.	653
ITK	3702	bcgsc.ca	37	5	156675870	156675870	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ITK	NM_005546	exon16	c.G1644A	p.M548I	.	.	60	4	96	0	.	1427
ITPR1	3708	bcgsc.ca	37	3	4776877	4776877	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ITPR1	NM_001168272	exon43	c.A5338G	p.R1780G	.	.	104	7	121	2	.	710
JAM2	58494	bcgsc.ca	37	21	27056209	27056209	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	JAM2	NM_021219	exon2	c.G82T	p.G28W	.	.	61	6	117	0	.	90
JAM2	58494	bcgsc.ca	37	21	27078338	27078338	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	JAM2	NM_021219	exon7	c.T745C	p.L249L	.	.	213	6	398	0	.	90
JMY	133746	bcgsc.ca	37	5	78573770	78573770	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	JMY	NM_152405	exon2	c.A1070G	p.E357G	.	.	89	4	88	0	.	227
KANK1	23189	bcgsc.ca	37	9	711904	711904	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KANK1	NM_001256876	exon7	c.A1138G	p.K380E	.	.	63	4	125	0	.	517
KANK1	23189	bcgsc.ca	37	9	730090	730090	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KANK1	NM_001256876	exon8	c.A2738G	p.Q913R	.	.	66	4	136	0	.	517
KANK3	256949	bcgsc.ca	37	19	8389375	8389375	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KANK3	NM_198471	exon10	c.T2340C	p.A780A	.	.	44	4	102	0	.	90
KAT2B	8850	bcgsc.ca	37	3	20153248	20153248	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KAT2B	NM_003884	exon6	c.A1012G	p.K338E	.	.	87	5	147	0	.	228
KAT8	84148	bcgsc.ca	37	16	31138546	31138546	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_182958	exon5	c.G553A	p.G185R	.	.	154	5	138	0	.	.
KATNAL2	83473	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	18	44625671	44625671	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KATNAL2	NM_031303	exon13	c.C1053A	p.P351P	.	.	99	12	124	0	.	93
KCNH8	131096	bcgsc.ca	37	3	19492896	19492896	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KCNH8	NM_144633	exon10	c.G1825T	p.G609W	.	.	55	4	155	0	.	524
KCNIP2	30819	ucsc.edu;bcgsc.ca	37	10	103588929	103588929	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KCNIP2	NM_014591	exon4	c.C296A	p.S99Y	.	.	32	4	43	0	.	90
KCNIP4	80333	bcgsc.ca	37	4	20751329	20751329	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KCNIP4	NM_025221	exon4	c.T325C	p.F109L	.	.	86	4	151	1	.	91
KCNQ4	9132	bcgsc.ca	37	1	41283841	41283841	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KCNQ4	NM_004700	exon3	c.C411T	p.F137F	.	.	70	5	92	0	.	90
KCNQ5	56479	bcgsc.ca	37	6	73904183	73904183	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KCNQ5	NM_001160133	exon15	c.C1902A	p.S634S	.	.	67	4	78	0	.	158
KCNT1	57582	bcgsc.ca	37	9	138664576	138664576	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KCNT1	NM_020822	exon19	c.A2024G	p.D675G	.	.	114	5	111	0	.	137
KCTD8	386617	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	44177219	44177219	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KCTD8	NM_198353	exon2	c.A1010G	p.K337R	.	.	106	40	149	0	.	92
KDM1A	23028	bcgsc.ca	37	1	23403825	23403825	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KDM1A	NM_001009999	exon16	c.A1839G	p.A613A	.	.	59	4	66	0	.	206
KDM2B	84678	ucsc.edu;bcgsc.ca	37	12	121947800	121947800	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KDM2B	NM_032590	exon11	c.C1217A	p.S406Y	.	.	39	4	67	0	.	638
KDM5B	10765	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	202702803	202702803	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KDM5B	NM_006618	exon23	c.G3635T	p.G1212V	.	.	72	28	79	0	.	273
KDM5D	8284	bcgsc.ca	37	Y	21883130	21883130	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KDM5D	NM_001146705	exon13	c.T1532C	p.I511T	.	.	37	4	195	0	.	560
KDM6B	23135	bcgsc.ca	37	17	7750884	7750884	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KDM6B	NM_001080424	exon11	c.A1278G	p.Q426Q	.	.	49	4	114	0	.	205
KDSR	2531	bcgsc.ca	37	18	61022531	61022531	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KDSR	NM_002035	exon5	c.C323A	p.A108E	.	.	103	5	137	1	.	227
KEAP1	9817	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	10602767	10602767	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KEAP1	NM_012289	exon3	c.G811T	p.V271L	.	.	45	35	68	0	.	637
KIAA0146	23514	bcgsc.ca	37	8	48352995	48352995	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KIAA0146	NM_001080394	exon8	c.C988A	p.Q330K	.	.	115	5	97	0	.	68
KIAA0319	9856	bcgsc.ca	37	6	24583900	24583900	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KIAA0319	NM_001168377	exon5	c.A1025G	p.N342S	.	.	53	4	98	0	.	92
KIAA0368	23392	bcgsc.ca	37	9	114128813	114128813	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KIAA0368	NM_001080398	exon48	c.C5742T	p.A1914A	.	.	82	4	164	0	.	68
KIAA0922	23240	bcgsc.ca	37	4	154525265	154525265	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KIAA0922	NM_001131007	exon25	c.G3101T	p.R1034I	.	.	96	4	243	0	.	92
KIAA0947	23379	broad.mit.edu;bcgsc.ca	37	5	5466617	5466617	+	Splice_Site	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KIAA0947	NM_015325	exon14	c.6061+2T>C	.	.	.	129	7	95	1	.	48
KIAA1107	23285	bcgsc.ca	37	1	92646274	92646274	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_015237	exon8	c.C1720A	p.P574T	.	.	261	7	321	0	.	.
KIAA1217	56243	bcgsc.ca	37	10	24508692	24508692	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KIAA1217	NM_019590	exon2	c.G208T	p.G70W	.	.	129	5	110	0	.	98
KIAA1239	57495	bcgsc.ca	37	4	37246802	37246802	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001144990	exon1	c.G113A	p.G38D	.	.	26	4	26	0	.	.
KIAA1456	57604	bcgsc.ca	37	8	12878613	12878613	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KIAA1456	NM_020844	exon5	c.G425T	p.W142L	.	.	100	5	146	0	.	90
KIAA1551	55196	bcgsc.ca	37	12	32137658	32137658	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_018169	exon4	c.A3769G	p.K1257E	.	.	86	4	144	0	.	.
KIAA1958	158405	bcgsc.ca	37	9	115407988	115407988	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KIAA1958	NM_133465	exon3	c.T1230C	p.D410D	.	.	74	4	139	0	.	91
KIAA1958	158405	bcgsc.ca	37	9	115422121	115422121	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KIAA1958	NM_133465	exon4	c.G1923A	p.R641R	.	.	69	4	86	0	.	91
KIAA2026	158358	bcgsc.ca	37	9	5968770	5968770	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KIAA2026	NM_001017969	exon3	c.A1461G	p.R487R	.	.	75	6	145	0	.	92
KIF13A	63971	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	17764367	17764367	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KIF13A	NM_022113	exon39	c.G5392T	p.A1798S	.	.	134	55	149	0	.	137
KIF1B	23095	bcgsc.ca	37	1	10292420	10292420	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KIF1B	NM_183416	exon2	c.G34T	p.V12L	.	.	70	4	78	0	.	93
KIF1B	23095	bcgsc.ca	37	1	10363466	10363466	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KIF1B	NM_183416	exon21	c.A2223G	p.K741K	.	.	135	6	190	0	.	93
KIF21B	23046	bcgsc.ca	37	1	200969652	200969652	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KIF21B	NM_017596	exon11	c.G1551T	p.L517L	.	.	57	4	58	0	.	96
KIF21B	23046	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	200946358	200946358	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KIF21B	NM_001252102	exon31	c.G4307T	p.R1436L	.	.	63	23	53	0	.	96
KIF22	3835	bcgsc.ca	37	16	29809808	29809808	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KIF22	NM_007317	exon3	c.G380T	p.G127V	.	.	52	4	66	0	.	68
KIF23	9493	bcgsc.ca	37	15	69715583	69715583	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KIF23	NM_138555	exon7	c.G649A	p.G217S	.	.	92	4	200	1	.	227
KIF24	347240	broad.mit.edu;bcgsc.ca	37	9	34257878	34257878	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KIF24	NM_194313	exon11	c.G1727A	p.G576E	.	.	182	6	200	0	.	22
KIF27	55582	bcgsc.ca	37	9	86518364	86518364	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KIF27	NM_017576	exon4	c.G1069T	p.D357Y	.	.	88	4	97	0	.	523
KLHDC4	54758	bcgsc.ca	37	16	87742967	87742967	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KLHDC4	NM_017566	exon10	c.T1351C	p.F451L	.	.	47	4	57	0	.	182
KLHL17	339451	bcgsc.ca	37	1	899557	899557	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KLHL17	NM_198317	exon10	c.C1515A	p.P505P	.	.	68	5	83	0	.	90
KLHL28	54813	bcgsc.ca	37	14	45403564	45403564	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KLHL28	NM_017658	exon3	c.G1097T	p.W366L	.	.	112	5	195	0	.	91
KLHL31	401265	bcgsc.ca	37	6	53516479	53516479	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KLHL31	NM_001003760	exon3	c.T1822C	p.S608P	.	.	52	4	72	1	.	23
KLHL31	401265	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	53517092	53517092	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KLHL31	NM_001003760	exon3	c.C1209A	p.A403A	.	.	84	37	69	1	.	23
KLHL7	55975	bcgsc.ca	37	7	23205370	23205370	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KLHL7	NM_001031710	exon8	c.A990G	p.A330A	.	.	128	5	143	0	.	90
KRIT1	889	bcgsc.ca	37	7	91852225	91852225	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KRIT1	NM_194456	exon14	c.A1322G	p.N441S	.	.	104	5	187	0	.	132
KRIT1	889	bcgsc.ca	37	7	91863836	91863836	+	Missense_Mutation	SNP	G	G	T	rs146328341	alternate_allele	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KRIT1	NM_194456	exon11	c.C916A	p.R306S	.	.	179	6	311	0	G|1.000;A|0.000	132
KRR1	11103	bcgsc.ca	37	12	75900586	75900586	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KRR1	NM_007043	exon3	c.A369G	p.L123L	.	.	64	4	122	0	.	92
KRTAP10-1	386677	ucsc.edu;bcgsc.ca;mdanderson.org	37	21	45959880	45959880	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KRTAP10-1	NM_198691	exon1	c.C154A	p.R52S	.	.	46	28	56	0	.	91
KRTAP3-3	85293	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	17	39150290	39150290	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_033185	exon1	c.C60A	p.C20X	.	.	248	90	350	0	.	.
KRTAP4-11	653240	ucsc.edu	37	17	39274319	39274319	+	Missense_Mutation	SNP	G	G	C	rs199712484		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_033059	exon1	c.C249G	p.S83R	.	.	44	10	81	5	.	.
KY	339855	bcgsc.ca	37	3	134322769	134322769	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	KY	NM_178554	exon11	c.A1638G	p.G546G	.	.	57	4	73	0	.	24
LAMA1	284217	bcgsc.ca	37	18	7008535	7008535	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LAMA1	NM_005559	exon28	c.T4074C	p.L1358L	.	.	62	4	92	0	.	149
LAMA2	3908	bcgsc.ca	37	6	129498858	129498858	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LAMA2	NM_000426	exon10	c.A1314G	p.A438A	.	.	102	5	204	0	.	162
LAMA3	3909	bcgsc.ca	37	18	21422617	21422617	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LAMA3	NM_001127717	exon29	c.G3506T	p.R1169L	.	.	124	5	141	1	.	100
LAMA3	3909	bcgsc.ca	37	18	21489202	21489202	+	Silent	SNP	T	T	C	rs200276517		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LAMA3	NM_198129	exon55	c.T7101C	p.S2367S	.	.	74	4	78	0	T|0.999;C|0.001	100
LAMA4	3910	bcgsc.ca	37	6	112463483	112463483	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LAMA4	NM_001105206	exon20	c.C2505T	p.S835S	.	.	47	4	60	0	.	140
LAMA4	3910	bcgsc.ca	37	6	112510405	112510405	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LAMA4	NM_001105206	exon7	c.T721C	p.C241R	.	.	95	4	121	0	.	140
LAMA4	3910	ucsc.edu;bcgsc.ca	37	6	112457355	112457355	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LAMA4	NM_001105206	exon25	c.A3384G	p.K1128K	.	.	36	4	65	0	.	140
LAMC1	3915	bcgsc.ca	37	1	183109558	183109558	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LAMC1	NM_002293	exon27	c.A4493G	p.E1498G	.	.	59	5	79	0	.	252
LAMC1	3915	bcgsc.ca	37	1	183109624	183109624	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LAMC1	NM_002293	exon27	c.T4559C	p.L1520P	.	.	67	4	85	0	.	252
LATS1	9113	bcgsc.ca	37	6	150001032	150001032	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LATS1	NM_004690	exon5	c.G2572T	p.D858Y	.	.	300	7	260	0	.	992
LCMT1	51451	bcgsc.ca	37	16	25172448	25172448	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LCMT1	NM_016309	exon6	c.A492G	p.R164R	.	.	67	4	54	0	.	22
LCP2	3937	bcgsc.ca	37	5	169675768	169675768	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LCP2	NM_005565	exon21	c.T1535C	p.L512P	.	.	199	6	202	1	.	23
LDLR	3949	bcgsc.ca	37	19	11218183	11218183	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LDLR	NM_001195798	exon6	c.A933G	p.K311K	.	.	54	5	110	1	.	94
LDLRAD4	753	bcgsc.ca	37	18	13438339	13438339	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_181482	exon4	c.A137G	p.N46S	.	.	70	4	85	0	.	.
LEPR	3953	bcgsc.ca	37	1	66083746	66083746	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LEPR	NM_001003680	exon16	c.T2312A	p.I771N	.	.	73	4	86	0	.	91
LGALS3BP	3959	bcgsc.ca	37	17	76968640	76968640	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LGALS3BP	NM_005567	exon6	c.T776C	p.M259T	.	.	61	4	73	0	.	515
LGALS7	3963	broad.mit.edu	37	19	39262670	39262670	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LGALS7	NM_002307	exon3	c.G96C	p.R32S	.	.	33	8	48	0	.	158
LGALS7B	653499	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	39281329	39281329	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001042507	exon3	c.G96C	p.R32S	.	.	174	15	205	0	.	.
LGI2	55203	bcgsc.ca	37	4	25026514	25026514	+	Splice_Site	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LGI2	NM_018176	exon5	c.342-1G>T	.	.	.	68	4	75	0	.	90
LIG1	3978	bcgsc.ca	37	19	48639326	48639326	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LIG1	NM_000234	exon15	c.T1388C	p.L463P	.	.	74	4	79	1	.	722
LILRP2	79166	broad.mit.edu;ucsc.edu	37	19	55221858	55221858	+	RNA	SNP	G	G	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	.	.	.	.	.	.	91	29	160	2	.	.
LIMS2	55679	bcgsc.ca	37	2	128412116	128412116	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LIMS2	NM_017980	exon4	c.G313A	p.E105K	.	.	255	7	214	0	.	90
LIN54	132660	bcgsc.ca	37	4	83859656	83859656	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LIN54	NM_194282	exon8	c.T1442C	p.L481P	.	.	73	4	119	0	.	90
LIN9	286826	bcgsc.ca	37	1	226474137	226474137	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LIN9	NM_173083	exon6	c.G469T	p.D157Y	.	.	185	6	128	0	.	90
LOC100294362	0	ucsc.edu	37	17	78327755	78327755	+	RNA	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	.	.	.	.	.	.	42	5	40	0	.	.
LOC100506713	0	bcgsc.ca	37	17	6913192	6913192	+	RNA	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	.	.	.	.	.	.	74	4	151	0	.	.
LOC286467	0	bcgsc.ca	37	X	130937550	130937550	+	RNA	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LOC286467	.	.	.	.	.	.	79	5	77	0	.	40
LOC374443	0	bcgsc.ca	37	12	9795247	9795247	+	RNA	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	.	.	.	.	.	.	58	12	92	0	.	.
LOC388849	0	bcgsc.ca	37	22	20138137	20138137	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	.	.	.	.	.	.	66	4	115	0	.	.
LONP2	83752	bcgsc.ca	37	16	48368255	48368255	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LONP2	NM_031490	exon12	c.A1924G	p.M642V	.	.	146	5	182	0	.	90
LPHN2	23266	bcgsc.ca	37	1	82408667	82408667	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LPHN2	NM_012302	exon5	c.G412A	p.G138R	.	.	59	4	134	0	.	525
LPIN2	9663	bcgsc.ca	37	18	2920393	2920393	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LPIN2	NM_014646	exon20	c.T2589C	p.L863L	.	.	59	5	86	0	.	227
LRFN4	78999	ucsc.edu;bcgsc.ca	37	11	66625840	66625840	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LRFN4	NM_024036	exon1	c.G625A	p.A209T	.	.	61	6	33	0	.	90
LRG1	116844	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	4538450	4538450	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LRG1	NM_052972	exon2	c.G546T	p.G182G	.	.	24	16	40	0	.	91
LRIG2	9860	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	1	113658968	113658968	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LRIG2	NM_014813	exon16	c.G2590T	p.E864X	.	.	162	66	192	0	.	229
LRIT3	345193	bcgsc.ca	37	4	110791837	110791837	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LRIT3	NM_198506	exon4	c.A1932G	p.T644T	.	.	54	5	230	1	.	90
LRMP	4033	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	25254117	25254117	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LRMP	NM_001204126	exon14	c.C747A	p.S249R	.	.	50	10	85	0	.	228
LRRC16A	55604	bcgsc.ca	37	6	25472687	25472687	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LRRC16A	NM_001173977	exon11	c.C812T	p.A271V	.	.	147	7	159	0	.	137
LRRC28	123355	bcgsc.ca	37	15	99901640	99901640	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LRRC28	NM_144598	exon8	c.G795T	p.T265T	.	.	100	5	398	0	.	90
LRRC33	375387	bcgsc.ca	37	3	196387637	196387637	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LRRC33	NM_198565	exon3	c.C1123A	p.P375T	.	.	57	5	64	0	.	92
LRRC37BP1	147172	broad.mit.edu;bcgsc.ca	37	17	28935566	28935566	+	RNA	SNP	T	T	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	.	.	.	.	.	.	38	14	47	0	.	.
LRRC42	115353	bcgsc.ca	37	1	54433475	54433475	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LRRC42	NM_052940	exon8	c.T1150C	p.S384P	.	.	109	4	124	0	.	90
LRRC8B	23507	bcgsc.ca	37	1	90048233	90048233	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LRRC8B	NM_015350	exon5	c.A24G	p.K8K	.	.	146	5	171	0	.	92
LRRC8E	80131	bcgsc.ca	37	19	7963611	7963611	+	Silent	SNP	G	G	A	rs151002605	byfrequency	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LRRC8E	NM_001268284	exon4	c.G204A	p.P68P	.	.	61	4	138	0	G|1.000;A|0.000	92
LRRTM4	80059	bcgsc.ca	37	2	77746209	77746209	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LRRTM4	NM_024993	exon3	c.G786A	p.G262G	.	.	67	4	181	0	.	94
LSMEM2	0	bcgsc.ca	37	3	50316476	50316476	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	.	.	.	.	.	.	103	5	118	0	.	.
LTN1	26046	bcgsc.ca	37	21	30316013	30316013	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LTN1	NM_015565	exon23	c.T4334C	p.I1445T	.	.	87	4	312	2	.	530
LYST	1130	bcgsc.ca	37	1	235950560	235950560	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	LYST	NM_000081	exon14	c.A4802G	p.Q1601R	.	.	192	6	188	0	.	143
M1AP	130951	bcgsc.ca	37	2	74803585	74803585	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_138804	exon6	c.C930A	p.I310I	.	.	87	4	87	0	.	.
MACC1	346389	bcgsc.ca	37	7	20198229	20198229	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MACC1	NM_182762	exon5	c.G1755T	p.K585N	.	.	132	5	165	0	.	93
MACF1	23499	bcgsc.ca	37	1	39785382	39785382	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MACF1	NM_012090	exon32	c.G4007A	p.C1336Y	.	.	65	4	108	0	.	165
MACF1	23499	broad.mit.edu;bcgsc.ca	37	1	39788629	39788629	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MACF1	NM_012090	exon34	c.T4200C	p.T1400T	.	.	123	9	228	0	.	165
MADCAM1	8174	bcgsc.ca	37	19	501835	501836	+	Frame_Shift_Del	DEL	CA	CA	-	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	CA	CA	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MADCAM1	NM_130760	exon4	c.834_835del	p.278_279del	.	.	27	3	78	0	.	90
MAGEB18	286514	bcgsc.ca	37	X	26157741	26157741	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MAGEB18	NM_173699	exon2	c.T639C	p.R213R	.	.	125	5	101	0	.	130
MAGEB18	286514	broad.mit.edu;bcgsc.ca;mdanderson.org	37	X	26157602	26157602	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MAGEB18	NM_173699	exon2	c.T500A	p.V167E	.	.	90	81	85	2	.	130
MAGI1	9223	ucsc.edu;bcgsc.ca	37	3	65438959	65438959	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MAGI1	NM_001033057	exon6	c.A1016G	p.K339R	.	.	42	4	62	0	.	661
MAGI3	260425	broad.mit.edu;bcgsc.ca	37	1	114137184	114137184	+	Splice_Site	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MAGI3	NM_001142782	exon6	c.1018+2T>C	.	.	.	222	11	263	1	.	524
MAMDC4	158056	bcgsc.ca	37	9	139749007	139749007	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MAMDC4	NM_206920	exon8	c.C813A	p.T271T	.	.	62	4	59	0	.	156
MAN2A2	4122	bcgsc.ca	37	15	91448662	91448662	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MAN2A2	NM_006122	exon2	c.G314A	p.R105Q	.	.	51	4	90	0	.	136
MAP1A	4130	bcgsc.ca	37	15	43822400	43822400	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MAP1A	NM_002373	exon6	c.C8390A	p.P2797H	.	.	69	7	127	0	.	141
MAP2	4133	bcgsc.ca	37	2	210560216	210560216	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MAP2	NM_002374	exon7	c.A3322G	p.T1108A	.	.	64	4	210	1	.	591
MAP2K7	5609	bcgsc.ca	37	19	7975173	7975173	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MAP2K7	NM_145185	exon4	c.A362G	p.E121G	.	.	60	4	80	0	.	1450
MAP4K1	11184	bcgsc.ca	37	19	39090728	39090728	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MAP4K1	NM_007181	exon21	c.A1597G	p.T533A	.	.	73	4	73	0	.	980
MAST2	23139	bcgsc.ca	37	1	46487740	46487740	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MAST2	NM_015112	exon12	c.G1409T	p.R470L	.	.	57	4	80	0	.	581
MAST4	375449	bcgsc.ca	37	5	66429420	66429420	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MAST4	NM_001164664	exon17	c.C2172A	p.T724T	.	.	117	5	183	0	.	647
MBD6	114785	bcgsc.ca	37	12	57921968	57921968	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MBD6	NM_052897	exon10	c.C2445A	p.P815P	.	.	209	7	288	0	.	516
MBNL3	55796	bcgsc.ca	37	X	131524983	131524983	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MBNL3	NM_018388	exon4	c.A663G	p.K221K	.	.	25	3	72	0	.	130
MBOAT4	619373	bcgsc.ca	37	8	29989738	29989738	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MBOAT4	NM_001100916	exon3	c.A1029G	p.G343G	.	.	69	5	129	2	.	68
MCM9	254394	bcgsc.ca	37	6	119238880	119238880	+	Silent	SNP	G	G	T	rs115772624	byfrequency;alternate_allele	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MCM9	NM_017696	exon4	c.C750A	p.P250P	.	.	86	4	142	0	G|0.990;A|0.010	515
MDM1	56890	bcgsc.ca	37	12	68709009	68709009	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MDM1	NM_017440	exon9	c.T1218C	p.P406P	.	.	169	5	228	1	.	95
MDM4	4194	bcgsc.ca	37	1	204518724	204518724	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MDM4	NM_002393	exon11	c.T1387C	p.C463R	.	.	267	8	247	0	.	1271
MED25	81857	bcgsc.ca	37	19	50334656	50334656	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MED25	NM_030973	exon10	c.G1168T	p.G390C	.	.	120	5	99	0	.	91
MEFV	4210	bcgsc.ca	37	16	3306439	3306439	+	Missense_Mutation	SNP	G	G	A	rs144716190		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MEFV	NM_000243	exon1	c.C149T	p.P50L	.	.	130	5	128	0	G|1.000;A|0.000	228
MEGF6	1953	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	3428670	3428670	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MEGF6	NM_001409	exon8	c.G876T	p.G292G	.	.	177	65	174	0	.	90
MERTK	10461	broad.mit.edu;bcgsc.ca	37	2	112686781	112686781	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MERTK	NM_006343	exon2	c.C146A	p.P49Q	.	.	140	7	162	0	.	1463
METTL17	64745	bcgsc.ca	37	14	21460339	21460339	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	METTL17	NM_022734	exon4	c.A421G	p.T141A	.	.	70	4	126	0	.	94
MFSD6L	162387	bcgsc.ca	37	17	8701214	8701214	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MFSD6L	NM_152599	exon1	c.C1225A	p.L409I	.	.	46	4	89	0	.	90
MGAT4C	25834	bcgsc.ca	37	12	86373241	86373241	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MGAT4C	NM_013244	exon7	c.A1263G	p.K421K	.	.	95	5	195	0	.	93
MIOS	54468	bcgsc.ca	37	7	7613018	7613018	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MIOS	NM_019005	exon4	c.C912A	p.P304P	.	.	165	5	183	1	.	90
MIPEP	4285	bcgsc.ca	37	13	24413849	24413849	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MIPEP	NM_005932	exon12	c.C1277A	p.S426Y	.	.	69	4	85	0	.	90
MIR203	406986	bcgsc.ca	37	14	104583747	104583747	+	RNA	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	.	.	.	.	.	.	34	4	53	0	.	.
MKNK1-AS1	100507423	bcgsc.ca	37	1	47015639	47015639	+	RNA	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	.	.	.	.	.	.	184	7	194	0	.	.
MLL2	8085	bcgsc.ca	37	12	49425902	49425902	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MLL2	NM_003482	exon39	c.C12586A	p.Q4196K	.	.	67	4	91	0	.	612
MLL	4297	bcgsc.ca	37	11	118368745	118368745	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MLL	NM_001197104	exon21	c.C5759T	p.S1920L	.	.	126	5	164	0	.	1255
MLL5	55904	bcgsc.ca	37	7	104746101	104746101	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MLL5	NM_018682	exon17	c.A2412G	p.R804R	.	.	70	4	124	0	.	93
MLXIP	22877	bcgsc.ca	37	12	122618292	122618292	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MLXIP	NM_014938	exon9	c.C1490A	p.P497H	.	.	67	4	87	0	.	92
MMAB	326625	ucsc.edu	37	12	110011198	110011198	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MMAB	NM_052845	exon1	c.C88A	p.P30T	.	.	45	4	39	0	.	90
MMP10	4319	bcgsc.ca	37	11	102647038	102647038	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MMP10	NM_002425	exon6	c.G905T	p.R302M	.	.	58	4	147	0	.	713
MMP19	4327	ucsc.edu;bcgsc.ca;mdanderson.org	37	12	56235006	56235006	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MMP19	NM_001272101	exon3	c.C188A	p.A63E	.	.	25	8	30	0	.	227
MOCOS	55034	bcgsc.ca	37	18	33780268	33780268	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MOCOS	NM_017947	exon4	c.A922G	p.R308G	.	.	66	5	118	0	.	91
MOCS3	27304	bcgsc.ca	37	20	49576168	49576168	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MOCS3	NM_014484	exon1	c.C789A	p.I263I	.	.	128	6	107	0	.	93
MORN1	79906	bcgsc.ca	37	1	2318904	2318904	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MORN1	NM_024848	exon4	c.A312G	p.K104K	.	.	75	5	77	0	.	92
MORN5	254956	bcgsc.ca	37	9	124931928	124931928	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MORN5	NM_198469	exon3	c.C200T	p.T67I	.	.	76	4	69	0	.	90
MPND	84954	bcgsc.ca	37	19	4352924	4352924	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MPND	NM_032868	exon4	c.T562C	p.L188L	.	.	44	4	110	1	.	522
MPP4	58538	broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	202557682	202557682	+	Silent	SNP	C	C	T	rs201304506		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MPP4	NM_033066	exon3	c.G150A	p.V50V	.	.	43	8	113	0	C|0.999;T|0.000	22
MRE11A	4361	bcgsc.ca	37	11	94170349	94170349	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MRE11A	NM_005591	exon17	c.T1920C	p.Y640Y	.	.	240	8	301	0	.	722
MRPL10	124995	bcgsc.ca	37	17	45905967	45905967	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MRPL10	NM_148887	exon3	c.A152G	p.H51R	.	.	63	4	62	0	.	91
MRPL9	65005	bcgsc.ca	37	1	151734628	151734628	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MRPL9	NM_031420	exon4	c.A439G	p.R147G	.	.	224	6	184	0	.	91
MST4	0	bcgsc.ca	37	X	131205126	131205126	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MST4	NM_016542	exon8	c.C813A	p.H271Q	.	.	103	5	242	0	.	1461
MTFP1	51537	bcgsc.ca	37	22	30823382	30823382	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MTFP1	NM_016498	exon3	c.C420A	p.P140P	.	.	77	4	75	0	.	90
MTG1	92170	bcgsc.ca	37	10	135233566	135233566	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MTG1	NM_138384	exon11	c.C902T	p.A301V	.	.	104	6	98	0	.	91
MTMR14	64419	bcgsc.ca	37	3	9691362	9691362	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MTMR14	NM_022485	exon1	c.T95C	p.L32P	.	.	99	6	124	0	.	91
MTNR1A	4543	bcgsc.ca	37	4	187455175	187455175	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MTNR1A	NM_005958	exon2	c.T721C	p.F241L	.	.	107	5	185	0	.	524
MTR	4548	broad.mit.edu;bcgsc.ca	37	1	236966776	236966776	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MTR	NM_000254	exon2	c.A83G	p.K28R	.	.	311	10	291	0	.	92
MTUS1	57509	bcgsc.ca	37	8	17579240	17579240	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MTUS1	NM_001001931	exon1	c.C171T	p.A57A	.	.	63	4	97	0	.	92
MUC16	94025	bcgsc.ca	37	19	9049078	9049078	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MUC16	NM_024690	exon5	c.T32553C	p.P10851P	.	.	46	4	179	1	.	566
MUC16	94025	bcgsc.ca	37	19	9073316	9073316	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MUC16	NM_024690	exon3	c.G14130T	p.V4710V	.	.	58	4	387	0	.	566
MUC21	394263	bcgsc.ca	37	6	30954669	30954669	+	Silent	SNP	A	A	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MUC21	NM_001010909	exon2	c.A717T	p.T239T	.	.	205	16	247	5	.	92
MUC2	4583	bcgsc.ca	37	11	1083784	1083784	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MUC2	NM_002457	exon18	c.T2316C	p.T772T	.	.	95	6	87	0	.	90
MUC2	4583	bcgsc.ca	37	11	1093098	1093098	+	Silent	SNP	C	C	A	rs55886306		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MUC2	NM_002457	exon30	c.C4917A	p.T1639T	.	.	145	8	316	1	.	90
MVD	4597	bcgsc.ca	37	16	88723952	88723952	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MVD	NM_002461	exon4	c.G295A	p.G99R	.	.	54	4	108	0	.	90
MXRA5	25878	bcgsc.ca	37	X	3242648	3242648	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MXRA5	NM_015419	exon5	c.A1078G	p.T360A	.	.	106	5	115	0	.	136
MYADML2	255275	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	79899539	79899539	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MYADML2	NM_001145113	exon3	c.G79A	p.V27M	.	.	51	23	46	0	.	68
MYCBP2	23077	bcgsc.ca	37	13	77642922	77642922	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MYCBP2	NM_015057	exon70	c.A11949G	p.R3983R	.	.	225	6	271	2	.	236
MYH13	8735	bcgsc.ca	37	17	10215356	10215356	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MYH13	NM_003802	exon32	c.A4403G	p.Q1468R	.	.	58	4	95	0	.	6
MYH1	4619	bcgsc.ca	37	17	10402057	10402057	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MYH1	NM_005963	exon30	c.A4067G	p.E1356G	.	.	95	5	266	0	.	171
MYH1	4619	bcgsc.ca	37	17	10409150	10409150	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MYH1	NM_005963	exon19	c.T2153C	p.L718P	.	.	135	5	333	0	.	171
MYH2	4620	bcgsc.ca	37	17	10429021	10429021	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MYH2	NM_017534	exon31	c.A4360G	p.N1454D	.	.	102	5	235	1	.	194
MYH7	4625	ucsc.edu;bcgsc.ca	37	14	23894544	23894544	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MYH7	NM_000257	exon21	c.C2370A	p.A790A	.	.	45	5	105	0	.	94
MYO10	4651	bcgsc.ca	37	5	16769193	16769193	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MYO10	NM_012334	exon10	c.C1050A	p.S350S	.	.	69	5	86	0	.	3
MYO15A	51168	bcgsc.ca	37	17	18030129	18030129	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MYO15A	NM_016239	exon6	c.C3891A	p.L1297L	.	.	77	4	130	0	.	97
MYO18A	399687	bcgsc.ca	37	17	27442086	27442086	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MYO18A	NM_078471	exon14	c.T2350C	p.S784P	.	.	78	4	94	0	.	22
MYO18B	84700	bcgsc.ca	37	22	26294290	26294290	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MYO18B	NM_032608	exon29	c.G4685A	p.S1562N	.	.	77	4	121	0	.	142
MYO1A	4640	bcgsc.ca	37	12	57432208	57432208	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MYO1A	NM_005379	exon17	c.C1748A	p.P583H	.	.	96	5	113	0	.	231
MYO9B	4650	bcgsc.ca	37	19	17212804	17212804	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MYO9B	NM_001130065	exon2	c.C277T	p.R93W	.	.	46	4	52	0	.	67
MYOCD	93649	bcgsc.ca	37	17	12649235	12649235	+	Splice_Site	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MYOCD	NM_001146312	exon9	c.972-1G>T	.	.	.	35	4	56	0	.	93
MYOD1	4654	broad.mit.edu;mdanderson.org	37	11	17741511	17741511	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	MYOD1	NM_002478	exon1	c.A182G	p.E61G	.	.	26	11	29	0	.	154
NAA16	79612	bcgsc.ca	37	13	41897269	41897269	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NAA16	NM_001110798	exon5	c.G480T	p.L160F	.	.	90	4	84	0	.	90
NADKD1	133686	bcgsc.ca	37	5	36195374	36195374	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NADKD1	NM_001085411	exon12	c.C1201A	p.R401S	.	.	216	6	397	0	.	92
NAGS	162417	ucsc.edu;bcgsc.ca	37	17	42084822	42084822	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NAGS	NM_153006	exon5	c.T1228C	p.S410P	.	.	38	5	32	0	.	90
NARG2	79664	bcgsc.ca	37	15	60742002	60742002	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NARG2	NM_024611	exon10	c.T1164C	p.S388S	.	.	51	4	91	0	.	227
NAV2	89797	bcgsc.ca	37	11	20139789	20139789	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NAV2	NM_001244963	exon40	c.G7452A	p.L2484L	.	.	53	4	78	0	.	96
NBEA	26960	bcgsc.ca	37	13	36220450	36220450	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NBEA	NM_015678	exon50	c.G7672A	p.E2558K	.	.	107	5	142	0	.	144
NCAPG	64151	bcgsc.ca	37	4	17838859	17838859	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NCAPG	NM_022346	exon15	c.T2187C	p.I729I	.	.	93	4	263	0	.	153
NCAPH2	29781	bcgsc.ca	37	22	50961552	50961552	+	Missense_Mutation	SNP	C	C	A	rs142305731	byfrequency;alternate_allele	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NCAPH2	NM_001185011	exon19	c.C1637A	p.P546Q	.	.	59	4	72	0	C|1.000;T|0.000	92
ND5	0	broad.mit.edu;bcgsc.ca	37	MT	13916	13916	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	ENST00000361567	exon1	c.G1580A	p.G527E	.	.	518	67	263	0	.	.
NDST4	64579	bcgsc.ca	37	4	115750972	115750972	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NDST4	NM_022569	exon13	c.C2473A	p.R825R	.	.	155	6	244	0	.	94
NDUFA10	4705	bcgsc.ca	37	2	240960772	240960772	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NDUFA10	NM_004544	exon3	c.G302A	p.G101E	.	.	94	5	74	0	.	514
NEB	4703	bcgsc.ca	37	2	152364581	152364581	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NEB	NM_001271208	exon163	c.G23494A	p.E7832K	.	.	90	5	120	0	.	145
NEB	4703	bcgsc.ca	37	2	152511838	152511838	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NEB	NM_004543	exon51	c.G6753A	p.M2251I	.	.	46	4	94	0	.	145
NEB	4703	bcgsc.ca	37	2	152581421	152581421	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NEB	NM_004543	exon7	c.A457G	p.K153E	.	.	165	5	238	0	.	145
NEBL	10529	bcgsc.ca	37	10	21104586	21104586	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NEBL	NM_006393	exon22	c.A2209G	p.R737G	.	.	103	4	130	0	.	92
NEK1	4750	bcgsc.ca	37	4	170322872	170322872	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NEK1	NM_001199397	exon33	c.G3514T	p.G1172W	.	.	78	4	214	0	.	361
NEU1	4758	bcgsc.ca	37	6	31828037	31828037	+	Missense_Mutation	SNP	T	T	C	rs200845843		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NEU1	NM_000434	exon5	c.A803G	p.Y268C	.	.	77	4	81	0	T|0.999;C|0.001	91
NEU4	129807	ucsc.edu	37	2	242756094	242756094	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NEU4	NM_001167599	exon3	c.T246C	p.G82G	.	.	46	4	79	1	.	44
NFE2	4778	bcgsc.ca	37	12	54686267	54686267	+	Missense_Mutation	SNP	C	C	A	rs4348947	byhapmap;alternate_allele	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NFE2	NM_001261461	exon4	c.G1013T	p.R338L	.	.	126	6	153	0	C|1.000;|0.000	226
NFKB1	4790	bcgsc.ca	37	4	103505923	103505923	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NFKB1	NM_003998	exon11	c.T1012C	p.S338P	.	.	77	4	294	0	.	912
NFRKB	4798	bcgsc.ca	37	11	129745267	129745267	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NFRKB	NM_006165	exon16	c.T1914C	p.D638D	.	.	68	4	82	0	.	93
NFYA	4800	bcgsc.ca	37	6	41058030	41058030	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NFYA	NM_002505	exon6	c.G529A	p.G177S	.	.	207	6	178	0	.	226
NHS	4810	bcgsc.ca	37	X	17745000	17745000	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NHS	NM_198270	exon6	c.C2711A	p.P904H	.	.	112	5	85	0	.	197
NID2	22795	bcgsc.ca	37	14	52505621	52505621	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NID2	NM_007361	exon9	c.C2101A	p.H701N	.	.	145	6	268	0	.	158
NIPBL	25836	bcgsc.ca	37	5	37049235	37049235	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NIPBL	NM_015384	exon40	c.A6786G	p.E2262E	.	.	163	5	172	0	.	293
NKAPL	222698	bcgsc.ca	37	6	28228196	28228196	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NKAPL	NM_001007531	exon1	c.G1047T	p.M349I	.	.	108	5	133	0	.	70
NKTR	4820	bcgsc.ca	37	3	42678386	42678386	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NKTR	NM_005385	exon13	c.G1190T	p.W397L	.	.	166	5	212	0	.	93
NLE1	54475	bcgsc.ca	37	17	33466308	33466308	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NLE1	NM_018096	exon4	c.A406G	p.T136A	.	.	135	5	147	0	.	290
NLRP3	114548	bcgsc.ca	37	1	247587262	247587262	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NLRP3	NM_183395	exon3	c.C517A	p.L173I	.	.	193	6	195	0	.	674
NMRAL1	57407	bcgsc.ca	37	16	4519295	4519295	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NMRAL1	NM_020677	exon3	c.G212T	p.G71V	.	.	74	4	92	0	.	91
NOP14-AS1	317648	ucsc.edu	37	4	2940347	2940347	+	RNA	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	.	.	.	.	.	.	16	1	15	0	.	.
NOTCH2	4853	bcgsc.ca	37	1	120471620	120471620	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NOTCH2	NM_024408	exon23	c.G3871A	p.V1291I	.	.	57	4	53	0	.	1441
NOX3	50508	bcgsc.ca	37	6	155752043	155752043	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NOX3	NM_015718	exon8	c.G825A	p.V275V	.	.	73	5	82	0	.	91
NPHS1	4868	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	36340537	36340537	+	Silent	SNP	T	T	A	rs111277506	alternate_allele	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NPHS1	NM_004646	exon6	c.A627T	p.S209S	.	.	59	17	72	0	T|0.500;C|0.500	49
NPM2	10361	bcgsc.ca	37	8	21883166	21883166	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NPM2	NM_182795	exon4	c.G153T	p.L51F	.	.	54	4	64	0	.	90
NPR2	4882	bcgsc.ca	37	9	35800389	35800389	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NPR2	NM_003995	exon5	c.T1127C	p.V376A	.	.	178	6	166	0	.	335
NPY2R	4887	bcgsc.ca	37	4	156135158	156135158	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NPY2R	NM_000910	exon2	c.G67T	p.G23W	.	.	56	4	113	0	.	523
NR3C2	4306	bcgsc.ca	37	4	149002641	149002641	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NR3C2	NM_000901	exon9	c.G2809T	p.D937Y	.	.	58	4	97	0	.	154
NRAP	4892	bcgsc.ca	37	10	115409836	115409836	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NRAP	NM_001261463	exon9	c.A848G	p.E283G	.	.	97	4	108	1	.	522
NRIP1	8204	bcgsc.ca	37	21	16339282	16339282	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NRIP1	NM_003489	exon4	c.C1232A	p.P411H	.	.	151	5	374	1	.	186
NRP1	8829	bcgsc.ca	37	10	33496519	33496519	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NRP1	NM_001024629	exon10	c.G1740A	p.L580L	.	.	79	5	75	0	.	525
NT5C2	22978	bcgsc.ca	37	10	104849604	104849604	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NT5C2	NM_012229	exon19	c.T1511C	p.L504P	.	.	127	5	170	0	.	90
NT5DC1	221294	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	116542390	116542390	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NT5DC1	NM_152729	exon7	c.G703A	p.G235R	.	.	188	63	370	0	.	226
NT5DC2	64943	bcgsc.ca	37	3	52561697	52561697	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NT5DC2	NM_001134231	exon9	c.C973T	p.R325C	.	.	97	5	94	0	.	514
NTF3	4908	ucsc.edu	37	12	5604026	5604026	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NTF3	NM_001102654	exon2	c.C685T	p.Q229X	.	.	42	4	59	0	.	205
NUDT6	11162	bcgsc.ca	37	4	123814020	123814020	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NUDT6	NM_007083	exon5	c.T914C	p.L305P	.	.	73	4	144	1	.	90
NUP153	9972	bcgsc.ca	37	6	17626315	17626315	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	NUP153	NM_005124	exon19	c.G3625T	p.G1209C	.	.	114	5	139	0	.	637
OARD1	221443	bcgsc.ca	37	6	41038981	41038981	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_145063	exon3	c.C74A	p.P25Q	.	.	129	6	142	0	.	.
OBSCN	84033	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	228474710	228474710	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	OBSCN	NM_001271223	exon40	c.G10801T	p.A3601S	.	.	62	48	71	0	.	403
OCIAD1	54940	bcgsc.ca	37	4	48834652	48834652	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	OCIAD1	NM_001168254	exon2	c.G26T	p.R9M	.	.	101	4	87	0	.	68
OGDH	4967	bcgsc.ca	37	7	44733598	44733598	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	OGDH	NM_002541	exon11	c.G1510T	p.D504Y	.	.	89	5	99	0	.	228
OPHN1	4983	bcgsc.ca	37	X	67454375	67454375	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	OPHN1	NM_002547	exon6	c.G440T	p.R147L	.	.	164	6	167	0	.	110
OR11G2	390439	bcgsc.ca	37	14	20665831	20665831	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	OR11G2	NM_001005503	exon1	c.A337G	p.T113A	.	.	57	4	101	1	.	70
OR13C3	138803	broad.mit.edu	37	9	107298108	107298108	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	OR13C3	NM_001001961	exon1	c.A987G	p.R329R	.	.	308	6	441	1	.	69
OR1S1	219959	bcgsc.ca	37	11	57982578	57982578	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	OR1S1	NM_001004458	exon1	c.T362C	p.V121A	.	.	119	6	374	1	.	113
OR2B3	442184	bcgsc.ca	37	6	29054296	29054296	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	OR2B3	NM_001005226	exon1	c.C730A	p.H244N	.	.	100	5	137	0	.	1
OR2G2	81470	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	247751752	247751752	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	OR2G2	NM_001001915	exon1	c.T91G	p.F31V	.	.	474	141	632	0	.	68
OR4D9	390199	bcgsc.ca	37	11	59283034	59283034	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	OR4D9	NM_001004711	exon1	c.T649C	p.S217P	.	.	115	6	157	2	.	68
OR4X1	390113	bcgsc.ca	37	11	48285924	48285924	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	OR4X1	NM_001004726	exon1	c.T512C	p.I171T	.	.	61	5	167	0	.	71
OR52H1	390067	bcgsc.ca	37	11	5566723	5566723	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	OR52H1	NM_001005289	exon1	c.A31G	p.N11D	.	.	63	5	99	0	.	114
OR5B21	219968	bcgsc.ca	37	11	58274871	58274871	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	OR5B21	NM_001005218	exon1	c.C708A	p.S236S	.	.	81	4	146	0	.	71
OR6C74	254783	bcgsc.ca	37	12	55641588	55641588	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	OR6C74	NM_001005490	exon1	c.G517T	p.D173Y	.	.	80	4	163	1	.	68
OSBPL8	114882	ucsc.edu	37	12	76767198	76767198	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	OSBPL8	NM_020841	exon18	c.A1843G	p.S615G	.	.	42	4	89	0	.	69
OTOF	9381	bcgsc.ca	37	2	26699873	26699873	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	OTOF	NM_194248	exon22	c.G2562A	p.M854I	.	.	159	6	105	0	.	135
OTOF	9381	bcgsc.ca	37	2	26706448	26706448	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	OTOF	NM_194248	exon13	c.G1274T	p.R425L	.	.	148	6	134	0	.	135
OXSR1	9943	bcgsc.ca	37	3	38232310	38232310	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	OXSR1	NM_005109	exon3	c.T272C	p.V91A	.	.	85	7	162	0	.	311
P2RY12	64805	bcgsc.ca	37	3	151055676	151055676	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	P2RY12	NM_022788	exon3	c.A958G	p.T320A	.	.	74	4	179	1	.	501
PABPN1L	390748	bcgsc.ca	37	16	88932809	88932809	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001080487	exon1	c.T206C	p.L69P	.	.	77	4	88	0	.	.
PACSIN3	29763	ucsc.edu;bcgsc.ca	37	11	47200816	47200816	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PACSIN3	NM_016223	exon8	c.A794G	p.H265R	.	.	47	4	62	0	.	68
PAFAH1B1	5048	bcgsc.ca	37	17	2570447	2570447	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PAFAH1B1	NM_000430	exon5	c.T354C	p.P118P	.	.	133	5	251	0	.	69
PALM2-AKAP2	445815	bcgsc.ca	37	9	112930750	112930750	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PALM2-AKAP2	NM_007203	exon11	c.C3285A	p.A1095A	.	.	81	5	115	0	.	475
PALM2-AKAP2	445815	bcgsc.ca	37	9	112694215	112694215	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PALM2-AKAP2	NM_007203	exon6	c.A403G	p.N135D	.	.	47	4	71	0	.	475
PAPD4	167153	bcgsc.ca	37	5	78919109	78919109	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PAPD4	NM_173797	exon5	c.G262T	p.G88C	.	.	123	5	128	0	.	69
PAPPA	5069	ucsc.edu	37	9	119158854	119158854	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PAPPA	NM_002581	exon22	c.G4843T	p.E1615X	.	.	41	4	153	0	.	77
PARP6	56965	bcgsc.ca	37	15	72543233	72543233	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PARP6	NM_020214	exon17	c.T1371C	p.A457A	.	.	83	4	164	0	.	522
PCDH17	27253	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	58240890	58240890	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PCDH17	NM_001040429	exon3	c.G2720A	p.G907D	.	.	65	25	167	1	.	97
PCDH7	5099	bcgsc.ca	37	4	30726162	30726162	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PCDH7	NM_032457	exon1	c.G3118A	p.G1040R	.	.	160	6	182	0	.	229
PCDHA11	56138	bcgsc.ca	37	5	140250127	140250127	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PCDHA11	NM_018902	exon1	c.A1439G	p.D480G	.	.	178	6	199	0	.	67
PCDHA3	56145	bcgsc.ca	37	5	140182762	140182762	+	Silent	SNP	C	C	A	rs144811750	byfrequency	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PCDHA3	NM_031497	exon1	c.C1980A	p.T660T	.	.	104	7	114	0	C|1.000;A|0.000	98
PCDHAC2	56134	bcgsc.ca	37	5	140346445	140346445	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PCDHAC2	NM_031883	exon1	c.T94C	p.L32L	.	.	44	4	61	0	.	26
PCDHB14	56122	bcgsc.ca	37	5	140603637	140603637	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PCDHB14	NM_018934	exon1	c.A560G	p.D187G	.	.	45	4	48	0	.	91
PCDHGB7	56099	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	140798829	140798829	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PCDHGB7	NM_018927	exon1	c.G1403A	p.G468D	.	.	129	29	147	0	.	29
PCGF2	7703	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	36891702	36891702	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PCGF2	NM_007144	exon11	c.C809T	p.P270L	.	.	111	52	148	0	.	658
PCNT	5116	bcgsc.ca	37	21	47766859	47766859	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PCNT	NM_006031	exon5	c.A923G	p.E308G	.	.	202	7	408	3	.	141
PCNX	22990	bcgsc.ca	37	14	71576287	71576287	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PCNX	NM_014982	exon35	c.C6863T	p.P2288L	.	.	77	4	144	0	.	91
PCYT2	5833	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	79864760	79864760	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PCYT2	NM_001184917	exon8	c.G606T	p.R202R	.	.	69	31	53	0	.	68
PDE1A	5136	bcgsc.ca	37	2	183050805	183050805	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PDE1A	NM_001258312	exon14	c.T1390C	p.S464P	.	.	130	5	203	0	.	93
PDE4A	5141	bcgsc.ca	37	19	10578092	10578092	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PDE4A	NM_001111307	exon15	c.C2456T	p.P819L	.	.	36	4	51	0	.	523
PDE4D	5144	bcgsc.ca	37	5	58270868	58270868	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PDE4D	NM_001104631	exon15	c.A2053G	p.T685A	.	.	110	5	298	0	.	226
PDE8B	8622	bcgsc.ca	37	5	76621451	76621451	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PDE8B	NM_001029852	exon3	c.C487A	p.R163R	.	.	154	6	198	0	.	90
PDPR	55066	bcgsc.ca	37	16	70190610	70190610	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PDPR	NM_017990	exon19	c.A2468G	p.D823G	.	.	76	4	90	0	.	135
PEG3	5178	bcgsc.ca	37	19	57327399	57327399	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PEG3	NM_001146184	exon9	c.A2411G	p.E804G	.	.	151	6	267	2	.	164
PER3	8863	ucsc.edu;bcgsc.ca	37	1	7887221	7887221	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PER3	NM_016831	exon17	c.A2208G	p.K736K	.	.	37	4	54	0	.	93
PEX11B	8799	broad.mit.edu	37	1	145522814	145522814	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PEX11B	NM_003846	exon4	c.A675G	p.L225L	.	.	332	6	280	1	.	90
PHACTR4	65979	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	28800595	28800595	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PHACTR4	NM_023923	exon6	c.C1383G	p.S461R	.	.	134	59	149	0	.	90
PHF8	23133	ucsc.edu;bcgsc.ca	37	X	54022184	54022184	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PHF8	NM_001184896	exon12	c.A1373G	p.E458G	.	.	40	5	43	0	.	133
PHGDH	26227	bcgsc.ca	37	1	120277295	120277295	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PHGDH	NM_006623	exon6	c.G549T	p.S183S	.	.	63	4	95	1	.	91
PHKA1	5255	bcgsc.ca	37	X	71895985	71895985	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PHKA1	NM_001172436	exon6	c.G553A	p.E185K	.	.	41	4	34	0	.	134
PHLDB2	90102	bcgsc.ca	37	3	111671548	111671548	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PHLDB2	NM_001134439	exon11	c.A2761G	p.I921V	.	.	52	4	84	0	.	96
PIEZO2	63895	bcgsc.ca	37	18	10689725	10689725	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_022068	exon45	c.G7086A	p.L2362L	.	.	55	4	99	0	.	.
PIGL	9487	bcgsc.ca	37	17	16229130	16229130	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PIGL	NM_004278	exon7	c.A677G	p.H226R	.	.	31	4	47	1	.	226
PIK3CB	5291	bcgsc.ca	37	3	138384043	138384043	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PIK3CB	NM_006219	exon18	c.T2507C	p.M836T	.	.	253	6	256	0	.	1311
PINX1	54984	bcgsc.ca	37	8	10689219	10689219	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PINX1	NM_017884	exon4	c.A257G	p.Q86R	.	.	74	5	121	0	.	726
PIWIL2	55124	bcgsc.ca	37	8	22147359	22147359	+	Splice_Site	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PIWIL2	NM_018068	exon9	c.987-1G>T	.	.	.	157	5	238	0	.	91
PIWIL3	440822	bcgsc.ca	37	22	25124369	25124369	+	Splice_Site	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PIWIL3	NM_001008496	exon16	c.1708-1G>T	.	.	.	203	6	211	0	.	93
PKD1L3	342372	bcgsc.ca	37	16	72032270	72032270	+	RNA	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PKD1L3	.	.	.	.	.	.	95	6	108	0	.	68
PKHD1	5314	bcgsc.ca	37	6	51890475	51890475	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PKHD1	NM_170724	exon32	c.T4133C	p.M1378T	.	.	77	4	102	0	.	603
PKHD1	5314	bcgsc.ca	37	6	51923286	51923286	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PKHD1	NM_170724	exon16	c.A1347G	p.G449G	.	.	90	4	177	0	.	603
PKN1	5585	bcgsc.ca	37	19	14578380	14578380	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PKN1	NM_213560	exon13	c.T1753C	p.S585P	.	.	69	5	71	0	.	1481
PKP1	5317	bcgsc.ca	37	1	201287754	201287754	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PKP1	NM_001005337	exon6	c.T1063C	p.W355R	.	.	121	6	95	1	.	92
PLA2G2A	5320	bcgsc.ca	37	1	20305227	20305227	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PLA2G2A	NM_001161727	exon3	c.G40T	p.G14C	.	.	106	4	136	0	.	650
PLCB4	5332	bcgsc.ca	37	20	9288544	9288544	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PLCB4	NM_182797	exon2	c.A83G	p.E28G	.	.	74	4	113	0	.	274
PLEC	5339	ucsc.edu;bcgsc.ca	37	8	144994696	144994696	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PLEC	NM_201380	exon32	c.C9704A	p.A3235D	.	.	38	4	32	0	.	141
PLEKHA5	54477	bcgsc.ca	37	12	19440417	19440417	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PLEKHA5	NM_001256470	exon13	c.T1790C	p.V597A	.	.	168	6	240	1	.	227
PLEKHA5	54477	bcgsc.ca	37	12	19511285	19511285	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PLEKHA5	NM_001256470	exon27	c.A3262G	p.K1088E	.	.	131	5	202	0	.	227
PLEKHO2	80301	ucsc.edu;bcgsc.ca	37	15	65157960	65157960	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PLEKHO2	NM_025201	exon6	c.A1346G	p.E449G	.	.	40	4	74	0	.	92
PLK4	10733	bcgsc.ca	37	4	128803019	128803019	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PLK4	NM_001190799	exon2	c.T64C	p.S22P	.	.	86	4	139	0	.	333
PLXDC2	84898	bcgsc.ca	37	10	20335869	20335869	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PLXDC2	NM_032812	exon3	c.G396T	p.W132C	.	.	80	4	119	0	.	93
PLXNA3	55558	ucsc.edu;bcgsc.ca	37	X	153696846	153696846	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PLXNA3	NM_017514	exon23	c.C4164T	p.A1388A	.	.	53	5	30	0	.	132
PLXND1	23129	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	129279234	129279234	+	Missense_Mutation	SNP	C	C	T	rs201100072	alternate_allele	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PLXND1	NM_015103	exon31	c.G5072A	p.R1691Q	.	.	152	62	158	0	C|0.999;G|0.000	90
POC1A	25886	bcgsc.ca	37	3	52185079	52185079	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	POC1A	NM_015426	exon2	c.G56T	p.R19L	.	.	297	8	276	0	.	90
POC1B	282809	bcgsc.ca	37	12	89891094	89891094	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	POC1B	NM_172240	exon3	c.C126A	p.L42L	.	.	87	5	116	0	.	92
POC5	134359	bcgsc.ca	37	5	74986367	74986367	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	POC5	NM_001099271	exon8	c.T816C	p.A272A	.	.	191	6	245	2	.	45
PODNL1	79883	bcgsc.ca	37	19	14047251	14047251	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PODNL1	NM_024825	exon3	c.C269A	p.P90H	.	.	141	6	123	0	.	90
POLN	353497	bcgsc.ca	37	4	2077189	2077189	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	POLN	NM_181808	exon22	c.G2445A	p.P815P	.	.	61	4	75	0	.	539
POLN	353497	bcgsc.ca	37	4	2181074	2181074	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	POLN	NM_181808	exon6	c.A1140G	p.K380K	.	.	262	8	299	2	.	539
POLR1A	25885	bcgsc.ca	37	2	86297218	86297218	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	POLR1A	NM_015425	exon13	c.C1789A	p.H597N	.	.	137	5	109	1	.	93
POLR1C	9533	bcgsc.ca	37	6	43485111	43485111	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	POLR1C	NM_203290	exon2	c.A137G	p.E46G	.	.	154	6	152	1	.	90
POLR2E	5434	bcgsc.ca	37	19	1090134	1090134	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	POLR2E	NM_002695	exon5	c.A440G	p.E147G	.	.	45	4	77	0	.	90
POLR3B	55703	bcgsc.ca	37	12	106890633	106890633	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	POLR3B	NM_018082	exon25	c.A2921G	p.E974G	.	.	69	4	103	1	.	91
POM121L12	285877	bcgsc.ca	37	7	53103475	53103475	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_182595	exon1	c.C111T	p.P37P	.	.	50	4	51	0	.	.
POMT2	29954	bcgsc.ca	37	14	77767455	77767455	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	POMT2	NM_013382	exon6	c.T794C	p.F265S	.	.	83	4	135	1	.	91
POU6F2	11281	bcgsc.ca	37	7	39504092	39504092	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	POU6F2	NM_007252	exon11	c.A1883G	p.K628R	.	.	120	6	132	1	.	90
PPARGC1B	133522	bcgsc.ca	37	5	149221870	149221870	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PPARGC1B	NM_133263	exon10	c.C2746A	p.R916R	.	.	123	6	131	0	.	186
PPFIA2	8499	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	81746949	81746949	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PPFIA2	NM_001220476	exon16	c.C1943A	p.T648K	.	.	116	52	198	0	.	231
PPFIBP2	8495	bcgsc.ca	37	11	7656792	7656792	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PPFIBP2	NM_003621	exon14	c.G1204T	p.G402W	.	.	168	7	258	0	.	273
PPP3CA	5530	bcgsc.ca	37	4	101961678	101961678	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PPP3CA	NM_000944	exon11	c.G1202T	p.R401L	.	.	171	7	280	0	.	227
PPP5C	5536	bcgsc.ca	37	19	46890653	46890653	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PPP5C	NM_006247	exon9	c.G1078T	p.G360C	.	.	87	5	77	0	.	227
PPT1	5538	bcgsc.ca	37	1	40542569	40542569	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PPT1	NM_000310	exon8	c.G743A	p.R248K	.	.	71	4	90	0	.	91
PRDM9	56979	bcgsc.ca	37	5	23521242	23521242	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PRDM9	NM_020227	exon6	c.T462C	p.P154P	.	.	105	6	226	0	.	139
PREX2	80243	bcgsc.ca	37	8	69058574	69058574	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PREX2	NM_024870	exon34	c.T4218C	p.V1406V	.	.	153	5	171	1	.	390
PRMT1	3276	bcgsc.ca	37	19	50188178	50188178	+	Splice_Site	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PRMT1	NM_001536	exon8	c.644-1G>T	.	.	.	51	4	58	0	.	91
PRPF40A	55660	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	2	153573934	153573934	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PRPF40A	NM_017892	exon1	c.G20T	p.R7L	.	.	84	30	87	0	.	68
PRPS2	5634	bcgsc.ca	37	X	12837706	12837706	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PRPS2	NM_001039091	exon5	c.G620T	p.R207L	.	.	139	6	119	0	.	130
PRR19	284338	ucsc.edu;bcgsc.ca	37	19	42814120	42814120	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PRR19	NM_199285	exon2	c.T384C	p.P128P	.	.	35	4	46	1	.	68
PRR26	414235	bcgsc.ca	37	10	708895	708895	+	RNA	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	.	.	.	.	.	.	135	5	192	0	.	.
PRRC2C	23215	bcgsc.ca	37	1	171509111	171509111	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_015172	exon16	c.T2500C	p.S834P	.	.	140	6	138	0	.	.
PRRT3	285368	bcgsc.ca	37	3	9989471	9989471	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PRRT3	NM_207351	exon4	c.C1386A	p.P462P	.	.	41	4	50	0	.	90
PRSS37	136242	bcgsc.ca	37	7	141536939	141536939	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PRSS37	NM_001008270	exon4	c.T540C	p.F180F	.	.	116	5	242	0	.	91
PSG4	5672	bcgsc.ca	37	19	43708053	43708053	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PSG4	NM_002780	exon2	c.G415G	p.V139V	.	.	99	6	160	2	.	91
PSMB5	5693	bcgsc.ca	37	14	23502608	23502608	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PSMB5	NM_001144932	exon2	c.C474A	p.T158T	.	.	67	4	94	0	.	91
PTBP2	58155	bcgsc.ca	37	1	97235387	97235387	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PTBP2	NM_021190	exon4	c.T244C	p.F82L	.	.	238	6	279	0	.	90
PTBP3	9991	bcgsc.ca	37	9	114994488	114994488	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001244898	exon9	c.T1013C	p.L338P	.	.	61	4	155	0	.	.
PTGR1	22949	bcgsc.ca	37	9	114312062	114312062	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PTGR1	NM_001146109	exon10	c.A897G	p.E299E	.	.	220	6	217	0	.	90
PTPLA	9200	bcgsc.ca	37	10	17641322	17641322	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PTPLA	NM_014241	exon5	c.T572C	p.L191P	.	.	69	4	52	0	.	226
PTPN5	84867	bcgsc.ca	37	11	18751015	18751015	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PTPN5	NM_032781	exon14	c.A1589G	p.Q530R	.	.	61	4	45	0	.	229
PTPRQ	374462	bcgsc.ca	37	12	81004319	81004319	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001145026	exon25	c.G4317A	p.V1439V	.	.	19	3	130	1	.	.
PTPRU	10076	bcgsc.ca	37	1	29585055	29585055	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PTPRU	NM_133177	exon3	c.G244A	p.G82S	.	.	122	5	135	0	.	291
PYGL	5836	bcgsc.ca	37	14	51374996	51374996	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PYGL	NM_002863	exon19	c.T2372C	p.L791P	.	.	156	6	344	2	.	91
PZP	5858	bcgsc.ca	37	12	9322030	9322030	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	PZP	NM_002864	exon16	c.T1997C	p.L666P	.	.	50	4	64	0	.	157
RAB1B	81876	ucsc.edu	37	11	66043353	66043353	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RAB1B	NM_030981	exon5	c.G358T	p.G120C	.	.	24	4	21	0	.	227
RAD51	5888	bcgsc.ca	37	15	41022165	41022165	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RAD51	NM_133487	exon9	c.A892G	p.T298A	.	.	69	5	120	0	.	563
RAD9B	144715	bcgsc.ca	37	12	110941665	110941665	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RAD9B	NM_152442	exon2	c.A101G	p.D34G	.	.	188	6	175	0	.	228
RAET1E	135250	bcgsc.ca	37	6	150211173	150211173	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RAET1E	NM_139165	exon2	c.A194G	p.N65S	.	.	159	6	212	0	.	90
RANBP2	5903	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	109380318	109380318	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RANBP2	NM_006267	exon20	c.G3323T	p.G1108V	.	.	118	45	214	0	.	675
RAPGEF2	9693	bcgsc.ca	37	4	160252584	160252584	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RAPGEF2	NM_014247	exon8	c.T986C	p.V329A	.	.	153	6	261	1	.	637
RARS2	57038	bcgsc.ca	37	6	88234305	88234305	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RARS2	NM_020320	exon11	c.G944T	p.R315L	.	.	59	4	70	0	.	92
RASL12	51285	bcgsc.ca	37	15	65351745	65351745	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RASL12	NM_016563	exon3	c.A172G	p.S58G	.	.	83	4	126	0	.	659
RBBP4	5928	bcgsc.ca	37	1	33123077	33123077	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RBBP4	NM_005610	exon3	c.A214G	p.T72A	.	.	217	7	254	0	.	227
RBKS	64080	bcgsc.ca	37	2	28004565	28004565	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RBKS	NM_022128	exon8	c.T886C	p.F296L	.	.	169	6	128	0	.	92
RDX	5962	bcgsc.ca	37	11	110102700	110102700	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RDX	NM_001260493	exon14	c.T1646C	p.V549A	.	.	285	7	335	2	.	90
REEP5	7905	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	112238112	112238112	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	REEP5	NM_005669	exon3	c.T316C	p.F106L	.	.	128	60	142	0	.	280
RELT	84957	bcgsc.ca	37	11	73101812	73101812	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RELT	NM_152222	exon4	c.G133T	p.G45C	.	.	73	4	89	0	.	228
RERE	473	bcgsc.ca	37	1	8421193	8421193	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RERE	NM_001042681	exon18	c.A2374G	p.T792A	.	.	47	4	53	0	.	515
RFPL1	5988	bcgsc.ca	37	22	29837818	29837818	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RFPL1	NM_021026	exon2	c.A661G	p.R221G	.	.	236	7	320	2	.	90
RGS14	10636	bcgsc.ca	37	5	176795747	176795747	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RGS14	NM_006480	exon9	c.G879T	p.E293D	.	.	69	4	103	0	.	226
RGS21	431704	bcgsc.ca	37	1	192335156	192335156	+	Missense_Mutation	SNP	A	A	G	rs78162494		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RGS21	NM_001039152	exon5	c.A361G	p.K121E	.	.	138	6	250	0	.	92
RGS9	8787	bcgsc.ca	37	17	63221204	63221204	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RGS9	NM_003835	exon18	c.T1492C	p.S498P	.	.	78	8	52	4	.	94
RHOT2	89941	bcgsc.ca	37	16	723524	723524	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RHOT2	NM_138769	exon19	c.G1775A	p.R592Q	.	.	81	4	101	0	.	91
RICTOR	253260	bcgsc.ca	37	5	38946651	38946651	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RICTOR	NM_152756	exon33	c.A4318G	p.K1440E	.	.	134	5	233	0	.	849
RICTOR	253260	bcgsc.ca	37	5	38960006	38960006	+	Silent	SNP	G	G	T	rs73751814	byfrequency;alternate_allele	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RICTOR	NM_152756	exon21	c.C1926A	p.P642P	.	.	148	5	270	0	G|0.993;A|0.007	849
RIMS1	22999	bcgsc.ca	37	6	72945349	72945349	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RIMS1	NM_014989	exon8	c.A1775G	p.E592G	.	.	62	4	108	1	.	144
RIN2	54453	bcgsc.ca	37	20	19937341	19937341	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RIN2	NM_001242581	exon4	c.T388C	p.S130P	.	.	79	4	78	0	.	660
RIPK1	8737	bcgsc.ca	37	6	3104529	3104529	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RIPK1	NM_003804	exon7	c.C986A	p.P329H	.	.	131	5	148	1	.	1044
RLF	6018	bcgsc.ca	37	1	40702001	40702001	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RLF	NM_012421	exon8	c.T1627C	p.S543P	.	.	165	6	214	0	.	93
RNASEH2C	84153	broad.mit.edu;bcgsc.ca;mdanderson.org	37	11	65488115	65488115	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RNASEH2C	NM_032193	exon1	c.G115C	p.D39H	.	.	19	9	24	0	.	90
RNF122	79845	bcgsc.ca	37	8	33406304	33406304	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RNF122	NM_024787	exon6	c.G435A	p.Q145Q	.	.	76	5	174	0	.	226
RNF169	254225	bcgsc.ca	37	11	74546922	74546922	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RNF169	NM_001098638	exon6	c.A1274G	p.E425G	.	.	40	4	88	1	.	69
RNF213	57674	bcgsc.ca	37	17	78320655	78320655	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RNF213	NM_001256071	exon29	c.G8520A	p.V2840V	.	.	109	5	103	0	.	577
RNF213	57674	bcgsc.ca	37	17	78326791	78326791	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RNF213	NM_001256071	exon33	c.T10355C	p.V3452A	.	.	51	4	43	0	.	577
ROBO1	6091	bcgsc.ca	37	3	78737916	78737916	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ROBO1	NM_002941	exon9	c.C1052T	p.P351L	.	.	75	4	103	0	.	67
ROBO1	6091	ucsc.edu;bcgsc.ca	37	3	79639053	79639053	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ROBO1	NM_002941	exon2	c.G9T	p.W3C	.	.	44	4	162	0	.	67
ROBO2	6092	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	77651546	77651546	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ROBO2	NM_002942	exon20	c.G3040A	p.D1014N	.	.	282	115	238	0	.	328
RPS15A	6210	bcgsc.ca	37	16	18799445	18799445	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RPS15A	NM_001030009	exon3	c.A153G	p.E51E	.	.	81	4	67	0	.	90
RPS4Y1	6192	broad.mit.edu;bcgsc.ca	37	Y	2722744	2722744	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RPS4Y1	NM_001008	exon5	c.A464G	p.K155R	.	.	49	6	376	0	.	424
RPS6KB2	6199	bcgsc.ca	37	11	67196051	67196051	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RPS6KB2	NM_003952	exon1	c.A35G	p.E12G	.	.	15	4	20	0	.	1000
RUNDC1	146923	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	41143400	41143400	+	Silent	SNP	T	T	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RUNDC1	NM_173079	exon5	c.T1509A	p.P503P	.	.	106	36	122	0	.	90
RXFP2	122042	bcgsc.ca	37	13	32351538	32351538	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RXFP2	NM_001166058	exon8	c.A667G	p.R223G	.	.	60	4	180	1	.	90
RYR1	6261	bcgsc.ca	37	19	39034497	39034497	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RYR1	NM_000540	exon87	c.G11994A	p.M3998I	.	.	74	5	61	0	.	100
RYR2	6262	bcgsc.ca	37	1	237711742	237711742	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	RYR2	NM_001035	exon26	c.C2918T	p.T973I	.	.	172	6	141	1	.	158
SACS	26278	bcgsc.ca	37	13	23913373	23913373	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SACS	NM_014363	exon10	c.G4642A	p.G1548R	.	.	177	5	231	0	.	298
SAFB	6294	bcgsc.ca	37	19	5653191	5653191	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SAFB	NM_002967	exon10	c.G1359T	p.T453T	.	.	95	4	200	0	.	228
SALL3	27164	bcgsc.ca	37	18	76755054	76755054	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SALL3	NM_171999	exon2	c.A3063G	p.K1021K	.	.	72	4	99	0	.	155
SASH3	54440	ucsc.edu;bcgsc.ca	37	X	128926328	128926328	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SASH3	NM_018990	exon5	c.C467A	p.P156Q	.	.	42	4	41	0	.	133
SBF2	81846	bcgsc.ca	37	11	9806739	9806739	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SBF2	NM_030962	exon37	c.T5164C	p.S1722P	.	.	117	5	156	0	.	93
SCAF4	57466	bcgsc.ca	37	21	33073467	33073467	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SCAF4	NM_020706	exon7	c.G618T	p.Q206H	.	.	75	5	155	0	.	90
SCAMP3	10067	bcgsc.ca	37	1	155230153	155230153	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SCAMP3	NM_005698	exon4	c.A356G	p.E119G	.	.	80	4	92	1	.	93
SCN8A	6334	bcgsc.ca	37	12	52100473	52100473	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SCN8A	NM_014191	exon11	c.G1609T	p.G537W	.	.	64	5	103	0	.	29
SCN8A	6334	bcgsc.ca	37	12	52163669	52163669	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SCN8A	NM_014191	exon18	c.C3390A	p.S1130R	.	.	79	5	99	0	.	29
SCO1	6341	bcgsc.ca	37	17	10590101	10590101	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SCO1	NM_004589	exon5	c.C714A	p.A238A	.	.	64	4	98	0	.	226
SCUBE2	57758	bcgsc.ca	37	11	9068963	9068963	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SCUBE2	NM_020974	exon16	c.A1942G	p.T648A	.	.	149	5	190	2	.	92
SDK1	221935	ucsc.edu	37	7	3991400	3991400	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SDK1	NM_152744	exon7	c.G998T	p.G333V	.	.	24	4	24	0	.	138
SEC16A	9919	bcgsc.ca	37	9	139348681	139348681	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_014866	exon21	c.T5956C	p.C1986R	.	.	100	6	84	0	.	.
SEC16A	9919	bcgsc.ca	37	9	139369216	139369216	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_014866	exon3	c.T2852C	p.L951P	.	.	69	4	65	0	.	.
SEMA3D	223117	bcgsc.ca	37	7	84685095	84685095	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SEMA3D	NM_152754	exon7	c.T799C	p.S267P	.	.	50	4	91	1	.	138
SEMA3D	223117	ucsc.edu;bcgsc.ca	37	7	84671523	84671523	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SEMA3D	NM_152754	exon8	c.G940A	p.G314R	.	.	41	5	173	0	.	138
SEMA3G	56920	bcgsc.ca	37	3	52475690	52475690	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SEMA3G	NM_020163	exon6	c.G567T	p.T189T	.	.	43	4	34	0	.	70
SENP7	57337	bcgsc.ca	37	3	101085546	101085546	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SENP7	NM_020654	exon9	c.A1046G	p.D349G	.	.	79	4	128	0	.	661
SEPP1	6414	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	42804757	42804757	+	Splice_Site	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SEPP1	NM_005410	exon5	c.534+1G>T	.	.	.	314	106	304	1	.	68
SEPT1	1731	bcgsc.ca	37	16	30391345	30391345	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SEPT1	NM_052838	exon8	c.C709A	p.Q237K	.	.	126	5	123	0	.	69
SERAC1	84947	bcgsc.ca	37	6	158532432	158532432	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SERAC1	NM_032861	exon17	c.T1931C	p.I644T	.	.	64	5	90	0	.	90
SERPINB1	1992	bcgsc.ca	37	6	2838903	2838903	+	Silent	SNP	C	C	A	rs147138804	alternate_allele	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SERPINB1	NM_030666	exon3	c.G186T	p.T62T	.	.	80	5	78	0	C|1.000;T|0.000	292
SERPINB7	8710	bcgsc.ca	37	18	61449710	61449710	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SERPINB7	NM_001261830	exon2	c.T104C	p.L35P	.	.	130	5	172	0	.	226
SESN1	27244	bcgsc.ca	37	6	109319741	109319741	+	Missense_Mutation	SNP	G	G	A	rs150654249	byfrequency	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SESN1	NM_014454	exon5	c.C947T	p.P316L	.	.	59	4	71	0	G|0.999;A|0.001	227
SETD1B	23067	bcgsc.ca	37	12	122247754	122247754	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SETD1B	NM_015048	exon5	c.C903T	p.S301S	.	.	63	4	75	0	.	86
SFT2D1	113402	broad.mit.edu	37	6	166743051	166743051	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SFT2D1	NM_145169	exon3	c.C177T	p.G59G	.	.	222	7	191	0	.	514
SGK1	6446	bcgsc.ca	37	6	134583232	134583232	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SGK1	NM_001143676	exon2	c.A124G	p.S42G	.	.	155	5	228	1	.	981
SH3GL2	6456	ucsc.edu	37	9	17791323	17791323	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SH3GL2	NM_003026	exon7	c.T719C	p.L240P	.	.	43	4	136	0	.	91
SHANK1	50944	bcgsc.ca	37	19	51171737	51171737	+	Silent	SNP	G	G	T	rs201730870	alternate_allele	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SHANK1	NM_016148	exon22	c.C3480A	p.I1160I	.	.	62	4	54	0	G|0.999;A|0.001	153
SHF	90525	bcgsc.ca	37	15	45460322	45460322	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SHF	NM_138356	exon8	c.G1095T	p.Q365H	.	.	67	4	133	0	.	69
SHMT2	6472	ucsc.edu;bcgsc.ca	37	12	57626600	57626600	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SHMT2	NM_005412	exon7	c.T831C	p.T277T	.	.	42	4	53	0	.	91
SHQ1	55164	bcgsc.ca	37	3	72799944	72799944	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SHQ1	NM_018130	exon11	c.T1225C	p.S409P	.	.	78	5	131	0	.	137
SHQ1	55164	bcgsc.ca	37	3	72881611	72881611	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SHQ1	NM_018130	exon5	c.G508T	p.D170Y	.	.	187	6	212	0	.	137
SHROOM3	57619	bcgsc.ca	37	4	77676096	77676096	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SHROOM3	NM_020859	exon7	c.T4460C	p.L1487P	.	.	70	4	119	0	.	93
SHROOM4	57477	bcgsc.ca	37	X	50377170	50377170	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SHROOM4	NM_020717	exon4	c.T1903C	p.S635P	.	.	269	8	212	0	.	131
SIGLEC7	27036	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	51645632	51645632	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SIGLEC7	NM_016543	exon1	c.G6A	p.L2L	.	.	31	14	43	0	.	153
SIN3A	25942	bcgsc.ca	37	15	75688800	75688800	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SIN3A	NM_001145358	exon13	c.G1892A	p.R631Q	.	.	69	4	153	0	.	230
SIPA1L1	26037	bcgsc.ca	37	14	72055548	72055548	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SIPA1L1	NM_015556	exon2	c.A959G	p.D320G	.	.	34	4	114	0	.	156
SLC12A1	6557	ucsc.edu;bcgsc.ca	37	15	48593511	48593511	+	Splice_Site	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SLC12A1	NM_001184832	exon26	c.3097-1G>T	.	.	.	58	5	80	0	.	24
SLC12A6	9990	bcgsc.ca	37	15	34533457	34533457	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SLC12A6	NM_133647	exon17	c.A2244G	p.G748G	.	.	144	5	304	0	.	517
SLC12A7	10723	bcgsc.ca	37	5	1065447	1065447	+	Silent	SNP	G	G	A	rs148955144		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SLC12A7	NM_006598	exon18	c.C2388T	p.P796P	.	.	194	6	128	0	G|1.000;A|0.000	138
SLC17A4	10050	ucsc.edu;bcgsc.ca	37	6	25762253	25762253	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SLC17A4	NM_005495	exon2	c.C63T	p.N21N	.	.	49	4	53	0	.	91
SLC17A9	63910	bcgsc.ca	37	20	61597023	61597023	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SLC17A9	NM_022082	exon10	c.G1007A	p.C336Y	.	.	75	4	85	0	.	92
SLC1A1	6505	bcgsc.ca	37	9	4490752	4490752	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SLC1A1	NM_004170	exon1	c.G73A	p.V25M	.	.	48	4	87	0	.	514
SLC20A2	6575	bcgsc.ca	37	8	42302187	42302187	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SLC20A2	NM_001257181	exon6	c.C707A	p.P236Q	.	.	81	5	185	0	.	92
SLC28A2	9153	bcgsc.ca	37	15	45560519	45560519	+	Silent	SNP	C	C	A	rs17215591	byfrequency;alternate_allele	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SLC28A2	NM_004212	exon13	c.C1311A	p.I437I	.	.	98	4	334	0	C|0.999;T|0.001	94
SLC28A2	9153	bcgsc.ca	37	15	45567610	45567610	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SLC28A2	NM_004212	exon18	c.A1876G	p.T626A	.	.	82	4	118	0	.	94
SLC29A4	222962	bcgsc.ca	37	7	5331394	5331394	+	Silent	SNP	G	G	T	rs141605536	byfrequency	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SLC29A4	NM_153247	exon5	c.G486T	p.R162R	.	.	279	9	229	1	G|1.000;T|0.000	515
SLC2A13	114134	ucsc.edu;bcgsc.ca	37	12	40158661	40158661	+	Splice_Site	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SLC2A13	NM_052885	exon9	c.1446-1G>T	.	.	.	32	4	126	0	.	515
SLC35D3	340146	bcgsc.ca	37	6	137243657	137243657	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SLC35D3	NM_001008783	exon1	c.T91C	p.F31L	.	.	165	6	144	1	.	91
SLC35F4	341880	bcgsc.ca	37	14	58048113	58048113	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SLC35F4	NM_001206920	exon4	c.T623C	p.L208P	.	.	80	4	216	0	.	24
SLC37A1	54020	ucsc.edu;bcgsc.ca	37	21	43954849	43954849	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SLC37A1	NM_018964	exon5	c.C180T	p.D60D	.	.	47	4	74	0	.	90
SLC37A3	84255	bcgsc.ca	37	7	140043347	140043347	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SLC37A3	NM_207113	exon13	c.A1191G	p.G397G	.	.	62	5	104	0	.	93
SLC38A1	81539	bcgsc.ca	37	12	46594884	46594884	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SLC38A1	NM_030674	exon13	c.T1000C	p.Y334H	.	.	91	4	209	0	.	518
SLC39A7	7922	bcgsc.ca	37	6	33169224	33169224	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SLC39A7	NM_006979	exon1	c.C202A	p.H68N	.	.	117	6	96	0	.	67
SLC44A4	80736	bcgsc.ca	37	6	31836974	31836974	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SLC44A4	NM_025257	exon13	c.C1191A	p.P397P	.	.	247	7	222	0	.	156
SLC44A5	204962	bcgsc.ca	37	1	75681491	75681491	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SLC44A5	NM_152697	exon19	c.T1676C	p.F559S	.	.	193	6	548	2	.	95
SLC52A1	55065	bcgsc.ca	37	17	4936392	4936392	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_017986	exon5	c.G1207T	p.G403W	.	.	66	4	106	0	.	.
SLC6A5	9152	bcgsc.ca	37	11	20658762	20658762	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SLC6A5	NM_004211	exon12	c.T1782C	p.F594F	.	.	110	5	233	0	.	156
SLC9A9	285195	bcgsc.ca	37	3	143371177	143371177	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SLC9A9	NM_173653	exon6	c.A675G	p.E225E	.	.	79	4	142	0	.	229
SLFNL1	200172	bcgsc.ca	37	1	41483328	41483328	+	Silent	SNP	C	C	A	rs77061292	byfrequency;alternate_allele	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SLFNL1	NM_144990	exon3	c.G936T	p.S312S	.	.	71	4	84	0	C|0.999;T|0.001	91
SLIT1	6585	bcgsc.ca	37	10	98773869	98773869	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SLIT1	NM_003061	exon29	c.A3016G	p.T1006A	.	.	49	4	73	0	.	94
SLIT2	9353	bcgsc.ca	37	4	20550696	20550696	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SLIT2	NM_004787	exon24	c.C2434A	p.R812S	.	.	52	4	137	1	.	521
SMAD3	4088	bcgsc.ca	37	15	67358616	67358616	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SMAD3	NM_005902	exon1	c.C124T	p.L42F	.	.	61	4	99	0	.	904
SMARCA2	6595	bcgsc.ca	37	9	2039701	2039701	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SMARCA2	NM_139045	exon4	c.C591A	p.P197P	.	.	84	5	143	0	.	653
SMARCC2	6601	bcgsc.ca	37	12	56558194	56558194	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SMARCC2	NM_003075	exon27	c.C3461T	p.P1154L	.	.	98	5	144	0	.	229
SMARCD1	6602	bcgsc.ca	37	12	50492525	50492525	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SMARCD1	NM_003076	exon12	c.A1421G	p.E474G	.	.	72	4	81	0	.	228
SMC2	10592	bcgsc.ca	37	9	106877082	106877082	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SMC2	NM_006444	exon13	c.G1643A	p.R548Q	.	.	69	4	104	0	.	210
SMC2	10592	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	9	106894408	106894408	+	Splice_Site	SNP	T	T	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SMC2	NM_001042551	exon22	c.3108+2T>G	.	.	.	287	123	503	0	.	210
SMC4	10051	bcgsc.ca	37	3	160129755	160129755	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SMC4	NM_005496	exon5	c.A735G	p.E245E	.	.	112	5	142	0	.	291
SMC5	23137	bcgsc.ca	37	9	72965080	72965080	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SMC5	NM_015110	exon23	c.T2940C	p.S980S	.	.	82	4	99	0	.	229
SMG9	56006	bcgsc.ca	37	19	44237550	44237550	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SMG9	NM_019108	exon12	c.T1265C	p.L422P	.	.	124	5	154	1	.	91
SNRNP200	23020	bcgsc.ca	37	2	96967390	96967390	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SNRNP200	NM_014014	exon4	c.G446T	p.R149L	.	.	319	8	376	1	.	162
SNRNP40	9410	bcgsc.ca	37	1	31734441	31734441	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SNRNP40	NM_004814	exon9	c.T959C	p.L320S	.	.	103	5	130	0	.	68
SNRPA1	6627	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	101827889	101827889	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SNRPA1	NM_003090	exon4	c.G328T	p.A110S	.	.	99	66	196	1	.	226
SNX7	51375	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	99203828	99203828	+	Silent	SNP	G	G	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SNX7	NM_015976	exon8	c.G1161C	p.V387V	.	.	84	32	114	0	.	229
SON	6651	bcgsc.ca	37	21	34931597	34931597	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SON	NM_032195	exon5	c.T6383C	p.V2128A	.	.	104	5	302	1	.	97
SORCS2	57537	bcgsc.ca	37	4	7727014	7727014	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SORCS2	NM_020777	exon20	c.G2745T	p.Q915H	.	.	54	4	77	0	.	91
SOS2	6655	bcgsc.ca	37	14	50655285	50655285	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SOS2	NM_006939	exon5	c.G644T	p.R215L	.	.	78	4	91	0	.	849
SP4	6671	bcgsc.ca	37	7	21469465	21469465	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SP4	NM_003112	exon3	c.A682G	p.T228A	.	.	104	4	84	0	.	95
SP5	389058	bcgsc.ca	37	2	171573097	171573097	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SP5	NM_001003845	exon2	c.C380T	p.P127L	.	.	27	5	21	0	.	90
SP6	80320	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	45925714	45925714	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SP6	NM_001258248	exon2	c.C82A	p.P28T	.	.	52	21	42	0	.	91
SPATA31D1	389763	bcgsc.ca	37	9	84610000	84610000	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001001670	exon4	c.T4615C	p.C1539R	.	.	49	4	87	0	.	.
SPATA31D1	389763	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	84609195	84609195	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001001670	exon4	c.G3810T	p.Q1270H	.	.	64	22	106	1	.	.
SPECC1	92521	bcgsc.ca	37	17	20013787	20013787	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SPECC1	NM_001033553	exon3	c.C195A	p.T65T	.	.	148	5	277	1	.	639
SPNS2	124976	bcgsc.ca	37	17	4433952	4433952	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SPNS2	NM_001124758	exon4	c.G599T	p.R200L	.	.	102	6	229	1	.	68
SPRYD4	283377	bcgsc.ca	37	12	56863318	56863318	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SPRYD4	NM_207344	exon2	c.A581G	p.E194G	.	.	68	4	126	0	.	68
SPTBN5	51332	ucsc.edu;bcgsc.ca	37	15	42152870	42152870	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SPTBN5	NM_016642	exon47	c.T7797C	p.A2599A	.	.	40	4	67	0	.	91
SRP72	6731	bcgsc.ca	37	4	57350997	57350997	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SRP72	NM_006947	exon10	c.A1053G	p.E351E	.	.	71	4	61	0	.	116
SRPR	6734	bcgsc.ca	37	11	126134086	126134086	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SRPR	NM_003139	exon13	c.G1788T	p.K596N	.	.	62	4	62	0	.	90
SRPRB	58477	bcgsc.ca	37	3	133525454	133525454	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SRPRB	NM_021203	exon3	c.C156A	p.V52V	.	.	213	8	203	0	.	91
SRSF5	6430	bcgsc.ca	37	14	70238143	70238143	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SRSF5	NM_001039465	exon8	c.C784A	p.R262R	.	.	67	4	112	0	.	226
SSRP1	6749	bcgsc.ca	37	11	57100196	57100196	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SSRP1	NM_003146	exon6	c.A671G	p.H224R	.	.	160	5	152	2	.	228
SSX2IP	117178	bcgsc.ca	37	1	85135493	85135493	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SSX2IP	NM_001166417	exon5	c.A297G	p.V99V	.	.	66	4	136	0	.	92
ST3GAL2	6483	ucsc.edu;bcgsc.ca	37	16	70432284	70432284	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ST3GAL2	NM_006927	exon2	c.G150A	p.L50L	.	.	39	4	43	0	.	91
ST8SIA4	7903	bcgsc.ca	37	5	100191849	100191849	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ST8SIA4	NM_005668	exon4	c.G755T	p.R252L	.	.	164	6	160	0	.	153
STAB2	55576	bcgsc.ca	37	12	104109638	104109638	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	STAB2	NM_017564	exon43	c.C4583T	p.A1528V	.	.	59	4	70	0	.	104
STIM2	57620	bcgsc.ca	37	4	27024424	27024424	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	STIM2	NM_001169118	exon13	c.C2071A	p.Q691K	.	.	133	6	165	0	.	91
STK4	6789	bcgsc.ca	37	20	43653657	43653657	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	STK4	NM_006282	exon10	c.A1191G	p.E397E	.	.	49	4	58	0	.	767
STOML1	9399	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	74277722	74277722	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	STOML1	NM_001256672	exon5	c.G727T	p.A243S	.	.	38	10	94	0	.	91
STRAP	11171	bcgsc.ca	37	12	16050873	16050873	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	STRAP	NM_007178	exon7	c.T696C	p.H232H	.	.	92	5	116	0	.	228
STRIP1	85369	bcgsc.ca	37	1	110584236	110584236	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_033088	exon7	c.C729A	p.T243T	.	.	108	5	125	0	.	.
STRIP1	85369	bcgsc.ca	37	1	110586373	110586373	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_033088	exon10	c.A1181G	p.E394G	.	.	117	5	123	0	.	.
STXBP5	134957	bcgsc.ca	37	6	147684600	147684600	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	STXBP5	NM_001127715	exon24	c.A2675G	p.K892R	.	.	118	5	158	0	.	90
SUN3	256979	bcgsc.ca	37	7	48065487	48065487	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SUN3	NM_152782	exon3	c.T171C	p.T57T	.	.	115	5	177	0	.	514
SUSD2	56241	bcgsc.ca	37	22	24580807	24580807	+	Silent	SNP	C	C	T	rs78586898	byfrequency	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SUSD2	NM_019601	exon5	c.C681T	p.S227S	.	.	154	6	173	0	C|0.978;T|0.022	91
SVEP1	79987	bcgsc.ca	37	9	113205939	113205939	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SVEP1	NM_153366	exon27	c.A4525G	p.R1509G	.	.	121	5	205	0	.	75
SYCN	342898	ucsc.edu;bcgsc.ca	37	19	39694627	39694627	+	Missense_Mutation	SNP	C	C	T	rs201454210		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SYCN	NM_001080468	exon1	c.G268A	p.V90M	.	.	46	4	52	0	.	68
SYDE1	85360	bcgsc.ca	37	19	15221436	15221436	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SYDE1	NM_033025	exon4	c.C1180A	p.R394S	.	.	49	6	50	0	.	92
SYF2	25949	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	25558651	25558651	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SYF2	NM_015484	exon2	c.G76T	p.A26S	.	.	90	41	80	0	.	90
SYMPK	8189	bcgsc.ca	37	19	46329565	46329565	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SYMPK	NM_004819	exon17	c.G2248A	p.E750K	.	.	76	5	51	0	.	91
SYNE1	23345	bcgsc.ca	37	6	152665315	152665315	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SYNE1	NM_182961	exon74	c.A12126G	p.Q4042Q	.	.	116	6	128	0	.	607
SYNJ1	8867	bcgsc.ca	37	21	34042645	34042645	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SYNJ1	NM_203446	exon15	c.T1881C	p.G627G	.	.	69	4	148	0	.	232
SYNJ1	8867	bcgsc.ca	37	21	34051091	34051091	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SYNJ1	NM_203446	exon12	c.T1491C	p.S497S	.	.	65	4	196	0	.	232
SYT6	148281	bcgsc.ca	37	1	114680398	114680398	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SYT6	NM_205848	exon3	c.A535G	p.S179G	.	.	151	5	194	0	.	94
SYTL2	54843	bcgsc.ca	37	11	85436251	85436251	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	SYTL2	NM_206927	exon1	c.A1249G	p.S417G	.	.	97	4	148	0	.	137
TAF4	6874	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	60578221	60578221	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TAF4	NM_003185	exon9	c.G2481T	p.S827S	.	.	103	46	105	0	.	93
TANGO6	79613	bcgsc.ca	37	16	68900989	68900989	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_024562	exon4	c.C860T	p.T287I	.	.	120	5	106	0	.	.
TANGO6	79613	bcgsc.ca	37	16	68961899	68961899	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_024562	exon13	c.A2556G	p.P852P	.	.	107	5	143	0	.	.
TAS2R7	50837	bcgsc.ca	37	12	10954391	10954391	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TAS2R7	NM_023919	exon1	c.T779C	p.M260T	.	.	89	4	211	1	.	91
TAX1BP1	8887	bcgsc.ca	37	7	27809424	27809424	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TAX1BP1	NM_006024	exon5	c.A583G	p.R195G	.	.	224	6	302	1	.	153
TBC1D7	51256	bcgsc.ca	37	6	13327075	13327075	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TBC1D7	NM_001143965	exon2	c.T56C	p.F19S	.	.	140	5	113	0	.	91
TBC1D8B	54885	bcgsc.ca	37	X	106066538	106066538	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TBC1D8B	NM_198881	exon5	c.T669C	p.C223C	.	.	78	4	160	0	.	133
TBC1D9	23158	bcgsc.ca	37	4	141592056	141592056	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TBC1D9	NM_015130	exon7	c.A1084G	p.S362G	.	.	77	6	157	0	.	23
TBX2	6909	bcgsc.ca	37	17	59485702	59485702	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TBX2	NM_005994	exon7	c.C1974A	p.P658P	.	.	56	5	58	0	.	226
TCF4	6925	bcgsc.ca	37	18	53018134	53018134	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TCF4	NM_001243226	exon8	c.G776T	p.R259L	.	.	62	4	244	0	.	523
TENC1	23371	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	53446269	53446269	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TENC1	NM_015319	exon3	c.A245T	p.E82V	.	.	111	43	100	0	.	92
TENC1	23371	ucsc.edu	37	12	53442750	53442750	+	RNA	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TENC1	.	.	.	.	.	.	13	4	10	0	.	92
TENM2	57451	bcgsc.ca	37	5	167673910	167673910	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001122679	exon27	c.C5939A	p.P1980Q	.	.	130	5	125	0	.	.
TES	26136	bcgsc.ca	37	7	115874612	115874612	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TES	NM_015641	exon2	c.T52C	p.F18L	.	.	52	4	137	0	.	514
TET1	80312	broad.mit.edu;bcgsc.ca	37	10	70332547	70332547	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TET1	NM_030625	exon2	c.A452G	p.K151R	.	.	83	6	108	0	.	663
TFB1M	51106	bcgsc.ca	37	6	155618199	155618199	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TFB1M	NM_016020	exon4	c.G434T	p.S145I	.	.	78	4	100	0	.	91
TGFB1I1	7041	bcgsc.ca	37	16	31487862	31487862	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TGFB1I1	NM_001042454	exon9	c.G949T	p.G317W	.	.	92	6	79	0	.	90
TGFBRAP1	9392	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	105924415	105924415	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TGFBRAP1	NM_004257	exon2	c.G344T	p.R115L	.	.	45	23	48	0	.	91
THAP4	51078	bcgsc.ca	37	2	242573318	242573318	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_015963	exon2	c.T254C	p.F85S	.	.	119	5	147	0	.	.
THOC1	9984	bcgsc.ca	37	18	254319	254319	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	THOC1	NM_005131	exon8	c.T557C	p.V186A	.	.	79	4	111	0	.	91
THOC2	57187	bcgsc.ca	37	X	122761568	122761568	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	THOC2	NM_001081550	exon23	c.A2733G	p.K911K	.	.	132	5	125	0	.	133
TIMELESS	8914	bcgsc.ca	37	12	56811945	56811945	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TIMELESS	NM_003920	exon27	c.A3427G	p.K1143E	.	.	104	5	115	1	.	159
TIMM44	10469	bcgsc.ca	37	19	7998390	7998390	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TIMM44	NM_006351	exon7	c.A749G	p.E250G	.	.	75	5	145	1	.	91
TJP2	9414	bcgsc.ca	37	9	71852050	71852050	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TJP2	NM_001170416	exon14	c.A2270G	p.E757G	.	.	84	4	134	1	.	115
TLCD1	116238	bcgsc.ca	37	17	27053790	27053790	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TLCD1	NM_001160407	exon1	c.G37T	p.G13W	.	.	52	4	47	0	.	68
TLE3	7090	bcgsc.ca	37	15	70351770	70351770	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TLE3	NM_001105192	exon10	c.G744T	p.L248L	.	.	65	4	89	1	.	522
TLE4	7091	bcgsc.ca	37	9	82334982	82334982	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TLE4	NM_007005	exon16	c.T1612C	p.S538P	.	.	86	4	95	0	.	524
TMEM127	55654	bcgsc.ca	37	2	96919649	96919649	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TMEM127	NM_001193304	exon4	c.A614G	p.E205G	.	.	160	5	175	0	.	90
TMEM161A	54929	bcgsc.ca	37	19	19232205	19232205	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TMEM161A	NM_017814	exon9	c.T826C	p.S276P	.	.	141	8	173	0	.	154
TMEM161B	153396	bcgsc.ca	37	5	87498882	87498882	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TMEM161B	NM_153354	exon9	c.C811T	p.H271Y	.	.	198	6	294	1	.	92
TMEM198B	440104	mdanderson.org	37	12	56228701	56228701	+	RNA	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	.	.	.	.	.	.	157	70	181	0	.	.
TMEM205	374882	bcgsc.ca	37	19	11456024	11456024	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TMEM205	NM_033408	exon3	c.C168T	p.F56F	.	.	80	4	101	0	.	22
TMEM56	148534	bcgsc.ca	37	1	95616939	95616939	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TMEM56	NM_001199679	exon5	c.T363C	p.H121H	.	.	160	5	253	2	.	90
TMEM63B	55362	bcgsc.ca	37	6	44122468	44122468	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TMEM63B	NM_018426	exon24	c.G2347T	p.G783W	.	.	129	5	134	0	.	92
TMEM8A	58986	bcgsc.ca	37	16	425380	425380	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TMEM8A	NM_021259	exon7	c.T1280C	p.F427S	.	.	61	4	60	0	.	92
TMPRSS11A	339967	bcgsc.ca	37	4	68788625	68788625	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TMPRSS11A	NM_182606	exon7	c.T549C	p.V183V	.	.	50	4	74	0	.	69
TMPRSS11D	9407	bcgsc.ca	37	4	68703929	68703929	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TMPRSS11D	NM_004262	exon5	c.T436C	p.S146P	.	.	63	4	249	0	.	91
TMTC3	160418	bcgsc.ca	37	12	88548078	88548078	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TMTC3	NM_181783	exon4	c.T422C	p.V141A	.	.	129	5	174	0	.	91
TNFRSF1B	7133	bcgsc.ca	37	1	12248878	12248878	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TNFRSF1B	NM_001066	exon2	c.A104G	p.E35G	.	.	66	4	81	0	.	1085
TNFRSF6B	8771	bcgsc.ca	37	20	62328248	62328248	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TNFRSF6B	NM_003823	exon1	c.C128A	p.T43K	.	.	45	4	32	0	.	651
TNS1	7145	ucsc.edu;bcgsc.ca	37	2	218745712	218745712	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TNS1	NM_022648	exon16	c.G963T	p.P321P	.	.	42	5	57	0	.	156
TNXB	7148	bcgsc.ca	37	6	32035686	32035686	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TNXB	NM_019105	exon18	c.G6296T	p.G2099V	.	.	154	7	180	0	.	90
TOP2B	7155	bcgsc.ca	37	3	25665061	25665061	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TOP2B	NM_001068	exon21	c.G2657T	p.R886M	.	.	218	6	277	0	.	273
TOP2B	7155	bcgsc.ca	37	3	25674286	25674286	+	Splice_Site	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TOP2B	NM_001068	exon10	c.1012-1G>T	.	.	.	135	7	273	0	.	273
TOPBP1	11073	broad.mit.edu	37	3	133368331	133368331	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TOPBP1	NM_007027	exon10	c.A1400G	p.K467R	.	.	189	6	231	0	.	540
TOR2A	27433	bcgsc.ca	37	9	130495547	130495547	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TOR2A	NM_130459	exon3	c.T710C	p.F237S	.	.	62	6	70	1	.	90
TP53	7157	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	7578449	7578449	+	Missense_Mutation	SNP	C	C	A	rs193920817	alternate_allele	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	TP53,NS,carcinoma,0	TP53	NM_000546	exon5	c.G481T	p.A161S	.	.	56	36	98	0	.	70225
TPCN2	219931	bcgsc.ca	37	11	68822741	68822741	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TPCN2	NM_139075	exon4	c.C350A	p.P117H	.	.	82	5	76	0	.	90
TPP1	1200	bcgsc.ca	37	11	6640088	6640088	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TPP1	NM_000391	exon3	c.A148G	p.T50A	.	.	46	5	46	0	.	90
TPTE2P5	100616668	bcgsc.ca	37	13	41396485	41396485	+	RNA	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	.	.	.	.	.	.	35	4	26	0	.	.
TRAF3IP3	80342	bcgsc.ca	37	1	209933569	209933569	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TRAF3IP3	NM_025228	exon3	c.T185C	p.L62P	.	.	195	6	151	0	.	291
TRAK2	66008	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	202251196	202251196	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TRAK2	NM_015049	exon14	c.C1708T	p.L570L	.	.	54	19	121	0	.	90
TRAPPC10	7109	bcgsc.ca	37	21	45502852	45502852	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TRAPPC10	NM_003274	exon14	c.A1907G	p.N636S	.	.	62	4	119	0	.	92
TRAPPC12	51112	broad.mit.edu	37	2	3405588	3405588	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_016030	exon3	c.A1088G	p.E363G	.	.	488	8	338	0	.	.
TRAPPC5	126003	bcgsc.ca	37	19	7747392	7747392	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TRAPPC5	NM_001042461	exon2	c.G253T	p.A85S	.	.	52	4	69	0	.	68
TRHDE	29953	bcgsc.ca	37	12	72956759	72956759	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TRHDE	NM_013381	exon9	c.C1846A	p.Q616K	.	.	255	8	343	0	.	93
TRIM16	10626	bcgsc.ca	37	17	15586245	15586245	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TRIM16	.	.	.	.	.	.	54	4	87	0	.	228
TRIM23	373	bcgsc.ca	37	5	64887769	64887769	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TRIM23	NM_033228	exon11	c.G1552A	p.A518T	.	.	215	6	341	0	.	230
TRIM36	55521	bcgsc.ca	37	5	114506817	114506817	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TRIM36	NM_001017397	exon2	c.A166G	p.K56E	.	.	257	7	271	1	.	725
TRIM37	4591	bcgsc.ca	37	17	57139968	57139968	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TRIM37	NM_015294	exon11	c.T902C	p.L301P	.	.	182	6	183	0	.	660
TRIM68	55128	bcgsc.ca	37	11	4622909	4622909	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TRIM68	NM_018073	exon5	c.A791G	p.Q264R	.	.	119	5	106	0	.	91
TRIM9	114088	bcgsc.ca	37	14	51475905	51475905	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TRIM9	NM_052978	exon5	c.G1199T	p.W400L	.	.	25	3	95	0	.	227
TRIP12	9320	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	230667054	230667054	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TRIP12	NM_004238	exon20	c.C2895T	p.A965A	.	.	73	18	111	0	.	572
TRMT12	55039	bcgsc.ca	37	8	125463842	125463842	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TRMT12	NM_017956	exon1	c.A674G	p.K225R	.	.	318	8	266	1	.	226
TRPC5	7224	bcgsc.ca	37	X	111097176	111097176	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TRPC5	NM_012471	exon4	c.G1059T	p.R353S	.	.	80	4	118	0	.	130
TRPC6	7225	bcgsc.ca	37	11	101375291	101375291	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TRPC6	NM_004621	exon2	c.C409A	p.L137I	.	.	50	4	115	0	.	93
TRPM1	4308	bcgsc.ca	37	15	31323186	31323186	+	Missense_Mutation	SNP	G	G	T	rs199609931	alternate_allele	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TRPM1	NM_001252020	exon22	c.C3178A	p.L1060I	.	.	104	4	185	0	G|0.999;A|0.000	94
TRPM2	7226	bcgsc.ca	37	21	45817708	45817708	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TRPM2	NM_003307	exon13	c.A2011G	p.S671G	.	.	63	4	147	0	.	92
TRPM7	54822	bcgsc.ca	37	15	50853906	50853906	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TRPM7	NM_017672	exon39	c.A5567G	p.E1856G	.	.	121	6	233	1	.	392
TRPM8	79054	bcgsc.ca	37	2	234905095	234905095	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TRPM8	NM_024080	exon22	c.A3065G	p.Y1022C	.	.	161	6	273	2	.	94
TRPS1	7227	bcgsc.ca	37	8	116617064	116617064	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TRPS1	NM_014112	exon4	c.T1132C	p.S378P	.	.	252	8	217	0	.	229
TRPV2	51393	bcgsc.ca	37	17	16325955	16325955	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TRPV2	NM_016113	exon4	c.A377G	p.N126S	.	.	69	6	113	0	.	91
TSG101	7251	bcgsc.ca	37	11	18541083	18541083	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TSG101	NM_006292	exon2	c.C110A	p.P37H	.	.	147	5	140	0	.	90
TSSK3	81629	bcgsc.ca	37	1	32829616	32829616	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TSSK3	NM_052841	exon2	c.A566G	p.K189R	.	.	156	5	153	0	.	333
TTC18	118491	bcgsc.ca	37	10	75051124	75051124	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TTC18	NM_145170	exon20	c.G2309T	p.R770L	.	.	213	7	417	1	.	92
TTC23	64927	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	99759189	99759189	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TTC23	NM_001040657	exon5	c.G369T	p.V123V	.	.	166	98	382	0	.	90
TTC36	143941	bcgsc.ca	37	11	118399482	118399482	+	Silent	SNP	C	C	A	rs201671031	alternate_allele	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TTC36	NM_001080441	exon2	c.C283A	p.R95R	.	.	146	6	185	2	C|0.999;G|0.000	68
TTLL12	23170	ucsc.edu	37	22	43570300	43570300	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TTLL12	NM_015140	exon8	c.G1144T	p.E382X	.	.	46	4	26	0	.	90
TTLL3	26140	bcgsc.ca	37	3	9855017	9855017	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TTLL3	NM_001025930	exon4	c.A732G	p.T244T	.	.	123	6	117	0	.	585
TTLL6	284076	bcgsc.ca	37	17	46874550	46874550	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TTLL6	NM_001130918	exon7	c.G785A	p.G262E	.	.	51	4	66	0	.	90
TTN	7273	bcgsc.ca	37	2	179400405	179400405	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TTN	NM_001267550	exon358	c.T100937C	p.V33646A	.	.	50	4	86	1	.	636
TTN	7273	bcgsc.ca	37	2	179418295	179418295	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TTN	NM_001267550	exon334	c.G89437A	p.V29813I	.	.	60	4	106	0	.	636
TTN	7273	bcgsc.ca	37	2	179426819	179426819	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TTN	NM_001267550	exon326	c.T84040C	p.S28014P	.	.	75	4	214	2	.	636
TTN	7273	bcgsc.ca	37	2	179476511	179476511	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TTN	NM_001267550	exon268	c.A50525G	p.E16842G	.	.	78	4	225	1	.	636
TTN	7273	bcgsc.ca	37	2	179584759	179584759	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TTN	NM_001267550	exon81	c.C23610A	p.I7870I	.	.	57	4	158	0	.	636
TTN	7273	bcgsc.ca	37	2	179590174	179590174	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TTN	NM_001267550	exon71	c.A20757G	p.P6919P	.	.	70	4	120	0	.	636
TTN	7273	bcgsc.ca	37	2	179613448	179613448	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TTN	NM_133379	exon46	c.C13679A	p.P4560H	.	.	79	4	234	0	.	636
TTN	7273	ucsc.edu	37	2	179489356	179489356	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TTN	NM_001267550	exon242	c.A44651G	p.K14884R	.	.	33	4	167	1	.	636
TTN	7273	ucsc.edu;bcgsc.ca	37	2	179583632	179583632	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TTN	NM_001267550	exon84	c.A24295G	p.S8099G	.	.	27	4	54	0	.	636
TUBA1A	7846	ucsc.edu	37	12	49580147	49580147	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TUBA1A	NM_001270399	exon3	c.C321T	p.H107H	.	.	138	2	229	0	.	90
TUBBP5	643224	broad.mit.edu;bcgsc.ca	37	9	141069885	141069885	+	RNA	SNP	A	A	C	rs62581043	byfrequency	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	.	.	.	.	.	.	61	12	60	0	A|0.915;C|0.085	.
TULP4	56995	bcgsc.ca	37	6	158915800	158915800	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TULP4	NM_020245	exon11	c.C1792A	p.Q598K	.	.	225	6	232	0	.	91
TVP23C	201158	ucsc.edu	37	17	15457087	15457087	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_145301	exon3	c.G152A	p.C51Y	.	.	403	21	739	33	.	.
TYR	7299	bcgsc.ca	37	11	88924383	88924383	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	TYR	NM_000372	exon2	c.G833T	p.R278L	.	.	55	4	178	0	.	92
U2AF1	7307	bcgsc.ca	37	21	44521538	44521538	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	U2AF1	NM_001025203	exon3	c.T137C	p.I46T	.	.	136	6	224	0	.	90
UAP1L1	91373	bcgsc.ca	37	9	139972521	139972521	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	UAP1L1	NM_207309	exon2	c.G309T	p.L103L	.	.	14	3	25	0	.	91
UBE3A	7337	bcgsc.ca	37	15	25616678	25616678	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	UBE3A	NM_000462	exon7	c.T652C	p.S218P	.	.	200	7	422	0	.	660
UBE4A	9354	bcgsc.ca	37	11	118257282	118257282	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	UBE4A	NM_004788	exon16	c.A2563G	p.I855V	.	.	79	4	126	0	.	229
UBE4B	10277	bcgsc.ca	37	1	10189494	10189494	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	UBE4B	NM_001105562	exon12	c.T1683C	p.P561P	.	.	76	4	77	0	.	229
UBR4	23352	ucsc.edu	37	1	19465671	19465671	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	UBR4	NM_020765	exon59	c.T8637C	p.G2879G	.	.	48	4	49	0	.	612
UBTF	7343	ucsc.edu;bcgsc.ca	37	17	42287773	42287773	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	UBTF	NM_014233	exon14	c.G1428T	p.E476D	.	.	48	4	69	0	.	90
UFSP1	402682	bcgsc.ca	37	7	100486673	100486673	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	UFSP1	NM_001015072	exon1	c.T220C	p.L74L	.	.	55	4	78	0	.	22
UGCG	7357	bcgsc.ca	37	9	114694620	114694620	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	UGCG	NM_003358	exon8	c.T995C	p.I332T	.	.	164	5	180	0	.	91
UGT1A4	54657	ucsc.edu	37	2	234627622	234627622	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	UGT1A4	NM_007120	exon1	c.T156C	p.H52H	.	.	72	2	115	1	.	2
UIMC1	51720	bcgsc.ca	37	5	176395599	176395599	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	UIMC1	NM_016290	exon6	c.A1157G	p.E386G	.	.	174	5	207	0	.	208
UMOD	7369	bcgsc.ca	37	16	20357638	20357638	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	UMOD	NM_003361	exon5	c.A992G	p.H331R	.	.	103	6	82	0	.	92
UNC13C	440279	bcgsc.ca	37	15	54860097	54860097	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	UNC13C	NM_001080534	exon28	c.A6058G	p.T2020A	.	.	83	4	270	0	.	51
UNC45A	55898	bcgsc.ca	37	15	91496867	91496867	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	UNC45A	NM_018671	exon20	c.C2756A	p.P919H	.	.	50	4	103	0	.	24
UNC80	285175	bcgsc.ca	37	2	210696190	210696190	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	UNC80	NM_032504	exon16	c.T2650C	p.F884L	.	.	78	4	224	0	.	90
UNC80	285175	bcgsc.ca	37	2	210737516	210737516	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	UNC80	NM_032504	exon23	c.T3668C	p.L1223P	.	.	70	5	185	0	.	90
UNC80	285175	bcgsc.ca	37	2	210808222	210808222	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	UNC80	NM_032504	exon44	c.C6836A	p.P2279H	.	.	79	5	256	0	.	90
UNC93A	54346	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	167708073	167708073	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	UNC93A	NM_018974	exon2	c.G156A	p.L52L	.	.	115	43	101	0	.	90
UPF3A	65110	broad.mit.edu	37	13	115064428	115064428	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	UPF3A	NM_023011	exon8	c.C960A	p.V320V	.	.	958	12	840	0	.	91
UQCC	55245	bcgsc.ca	37	20	33969825	33969825	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	UQCC	NM_018244	exon4	c.T229C	p.S77P	.	.	74	5	84	0	.	153
URI1	8725	bcgsc.ca	37	19	30498402	30498402	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_003796	exon7	c.G543A	p.P181P	.	.	81	4	137	0	.	.
USF1	7391	ucsc.edu;bcgsc.ca	37	1	161011115	161011115	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	USF1	NM_001276373	exon7	c.C559A	p.P187T	.	.	69	6	92	0	.	516
USH1C	10083	bcgsc.ca	37	11	17518343	17518343	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	USH1C	NM_153676	exon25	c.G2508A	p.V836V	.	.	114	5	146	0	.	91
USH1C	10083	bcgsc.ca	37	11	17548324	17548324	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	USH1C	NM_153676	exon7	c.G555A	p.V185V	.	.	165	6	173	0	.	91
USP13	8975	bcgsc.ca	37	3	179478906	179478906	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	USP13	NM_003940	exon17	c.A1955G	p.D652G	.	.	113	5	124	0	.	659
USP9X	8239	bcgsc.ca	37	X	40999954	40999954	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	USP9X	NM_001039591	exon7	c.T700C	p.F234L	.	.	212	6	257	0	.	563
UTP14A	10813	bcgsc.ca	37	X	129059909	129059909	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	UTP14A	NM_006649	exon13	c.G1764T	p.E588D	.	.	228	6	158	0	.	132
VARS	7407	bcgsc.ca	37	6	31749910	31749910	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	VARS	NM_006295	exon18	c.C2195A	p.P732Q	.	.	79	5	95	0	.	93
VASN	114990	bcgsc.ca	37	16	4432384	4432384	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	VASN	NM_138440	exon2	c.G1506A	p.S502S	.	.	59	4	51	0	.	68
VCAN	1462	bcgsc.ca	37	5	82815346	82815346	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	VCAN	NM_004385	exon7	c.A1221G	p.K407K	.	.	94	4	183	1	.	238
VCX	26609	broad.mit.edu	37	X	7811971	7811971	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	VCX	NM_013452	exon3	c.G535T	p.E179X	.	.	1020	9	1040	1	.	22
VILL	50853	ucsc.edu	37	3	38035887	38035887	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	VILL	NM_015873	exon3	c.A271G	p.T91A	.	.	51	4	46	0	.	90
VPS13A	23230	bcgsc.ca	37	9	80018159	80018159	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	VPS13A	NM_033305	exon69	c.A9197G	p.E3066G	.	.	80	4	103	0	.	161
VPS37C	55048	bcgsc.ca	37	11	60906288	60906288	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	VPS37C	NM_017966	exon2	c.A14G	p.K5R	.	.	64	4	85	0	.	90
VSIG10	54621	bcgsc.ca	37	12	118511789	118511789	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_019086	exon5	c.T934C	p.S312P	.	.	58	4	56	1	.	.
VWA9	81556	bcgsc.ca	37	15	65899738	65899738	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001207058	exon2	c.A77G	p.N26S	.	.	64	4	82	0	.	.
VWCE	220001	broad.mit.edu;bcgsc.ca	37	11	61040788	61040788	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	VWCE	NM_152718	exon13	c.A1582G	p.N528D	.	.	126	7	170	0	.	91
WDR16	146845	bcgsc.ca	37	17	9532003	9532003	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	WDR16	NM_145054	exon9	c.T1040C	p.L347P	.	.	91	4	174	1	.	71
WDR44	54521	bcgsc.ca	37	X	117540949	117540949	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	WDR44	NM_001184965	exon10	c.A1493G	p.D498G	.	.	234	8	154	0	.	133
WDR53	348793	bcgsc.ca	37	3	196288317	196288317	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	WDR53	NM_182627	exon3	c.T30C	p.S10S	.	.	65	4	58	0	.	154
WDR70	55100	bcgsc.ca	37	5	37727032	37727032	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	WDR70	NM_018034	exon17	c.A1762G	p.I588V	.	.	64	4	163	0	.	187
WDR81	124997	bcgsc.ca	37	17	1630446	1630446	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	WDR81	NM_001163809	exon1	c.G2193A	p.L731L	.	.	58	4	100	1	.	91
WDR87	83889	bcgsc.ca	37	19	38376162	38376162	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_031951	exon6	c.C8032T	p.H2678Y	.	.	94	6	167	0	.	.
WDR90	197335	bcgsc.ca	37	16	705808	705808	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	WDR90	NM_145294	exon17	c.C1885T	p.P629S	.	.	56	4	50	0	.	92
WDR96	80217	bcgsc.ca	37	10	105990463	105990463	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	WDR96	NM_025145	exon2	c.G204A	p.V68V	.	.	184	6	236	0	.	95
WFDC1	58189	bcgsc.ca	37	16	84360521	84360521	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	WFDC1	NM_021197	exon6	c.G638T	p.R213M	.	.	82	4	129	0	.	153
WIPF3	644150	bcgsc.ca	37	7	29928980	29928980	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	WIPF3	NM_001080529	exon7	c.A1308G	p.E436E	.	.	211	6	169	1	.	69
WNK2	65268	ucsc.edu	37	9	96055314	96055314	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	WNK2	NM_006648	exon22	c.A5567G	p.E1856G	.	.	51	4	39	0	.	765
XAF1	54739	bcgsc.ca	37	17	6665497	6665497	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	XAF1	NM_017523	exon5	c.A445G	p.R149G	.	.	65	4	104	0	.	90
XIRP2	129446	bcgsc.ca	37	2	168108393	168108393	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	XIRP2	NM_152381	exon9	c.A10491G	p.A3497A	.	.	55	4	90	0	.	104
XIRP2	129446	broad.mit.edu;bcgsc.ca	37	2	168105731	168105731	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	XIRP2	NM_152381	exon9	c.C7829T	p.P2610L	.	.	87	4	169	1	.	104
XPO4	64328	bcgsc.ca	37	13	21381607	21381607	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	XPO4	NM_022459	exon13	c.T1806C	p.D602D	.	.	160	5	150	1	.	272
XPOT	11260	bcgsc.ca	37	12	64812728	64812728	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	XPOT	NM_007235	exon6	c.A343G	p.T115A	.	.	271	8	410	0	.	652
XPOT	11260	bcgsc.ca	37	12	64812733	64812733	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	XPOT	NM_007235	exon6	c.G348A	p.E116E	.	.	272	9	422	0	.	652
XRCC1	7515	bcgsc.ca	37	19	44050239	44050239	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	XRCC1	NM_006297	exon13	c.G1446T	p.A482A	.	.	142	7	152	0	.	912
XRCC6P5	0	bcgsc.ca	37	X	98975979	98975979	+	RNA	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	.	.	.	.	.	.	70	4	95	0	.	.
XYLT1	64131	bcgsc.ca	37	16	17232325	17232325	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	XYLT1	NM_022166	exon8	c.C1651T	p.R551C	.	.	76	5	120	0	.	94
YEATS2	55689	bcgsc.ca	37	3	183454597	183454597	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	YEATS2	NM_018023	exon8	c.G904T	p.D302Y	.	.	114	6	106	0	.	138
YKT6	10652	bcgsc.ca	37	7	44244239	44244239	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	YKT6	NM_006555	exon2	c.C177A	p.V59V	.	.	103	4	101	0	.	90
ZAK	0	bcgsc.ca	37	2	174062836	174062836	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZAK	NM_133646	exon8	c.A665G	p.N222S	.	.	115	4	104	0	.	522
ZBBX	79740	bcgsc.ca	37	3	167086274	167086274	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZBBX	NM_024687	exon5	c.A157G	p.R53G	.	.	221	7	291	0	.	92
ZBP1	81030	bcgsc.ca	37	20	56188258	56188258	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZBP1	NM_001160419	exon5	c.G631T	p.G211W	.	.	233	6	250	0	.	228
ZBTB18	10472	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	244218434	244218434	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_205768	exon2	c.G1358T	p.G453V	.	.	105	86	83	0	.	.
ZBTB38	253461	bcgsc.ca	37	3	141161332	141161332	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZBTB38	NM_001080412	exon8	c.T102C	p.D34D	.	.	132	5	166	0	.	25
ZBTB49	166793	bcgsc.ca	37	4	4322947	4322947	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZBTB49	NM_145291	exon8	c.C2202A	p.T734T	.	.	62	5	59	0	.	92
ZCCHC6	79670	bcgsc.ca	37	9	88960018	88960018	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZCCHC6	NM_024617	exon5	c.C871A	p.Q291K	.	.	192	6	378	0	.	92
ZDHHC11	79844	bcgsc.ca	37	5	840685	840685	+	Missense_Mutation	SNP	C	C	A	rs200003984	alternate_allele	TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZDHHC11	NM_024786	exon5	c.G709T	p.G237W	.	.	64	4	50	0	.	92
ZFAND4	93550	bcgsc.ca	37	10	46143814	46143814	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001128324	exon5	c.C497A	p.P166Q	.	.	254	10	184	0	.	.
ZFP82	284406	bcgsc.ca	37	19	36884075	36884075	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZFP82	NM_133466	exon5	c.T1167C	p.T389T	.	.	117	5	122	0	.	91
ZFP82	284406	bcgsc.ca	37	19	36898889	36898889	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZFP82	NM_133466	exon3	c.C36A	p.S12S	.	.	130	5	160	0	.	91
ZFYVE9	9372	bcgsc.ca	37	1	52703475	52703475	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZFYVE9	NM_007323	exon4	c.T386C	p.V129A	.	.	94	4	179	1	.	230
ZNF12	7559	bcgsc.ca	37	7	6730791	6730791	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF12	NM_016265	exon5	c.A1782G	p.R594R	.	.	130	5	126	1	.	90
ZNF12	7559	bcgsc.ca	37	7	6731414	6731414	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF12	NM_016265	exon5	c.G1159T	p.G387W	.	.	130	5	167	0	.	90
ZNF136	7695	bcgsc.ca	37	19	12296973	12296973	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF136	NM_003437	exon3	c.C175A	p.R59R	.	.	205	6	351	2	.	92
ZNF20	7568	bcgsc.ca	37	19	12243814	12243814	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF20	NM_021143	exon4	c.A1187G	p.E396G	.	.	66	4	158	0	.	22
ZNF20	7568	bcgsc.ca	37	19	12244087	12244087	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF20	NM_021143	exon4	c.A914G	p.H305R	.	.	53	4	105	0	.	22
ZNF229	7772	bcgsc.ca	37	19	44934605	44934605	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF229	NM_014518	exon6	c.T351C	p.P117P	.	.	54	4	134	0	.	94
ZNF234	10780	ucsc.edu;bcgsc.ca	37	19	44661487	44661487	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_006630	exon6	c.A1318G	p.S440G	.	.	41	4	73	0	.	.
ZNF271	10778	bcgsc.ca	37	18	32886835	32886835	+	RNA	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF271	.	.	.	.	.	.	63	5	120	0	.	90
ZNF284	342909	bcgsc.ca	37	19	44591166	44591166	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001037813	exon5	c.A1535G	p.K512R	.	.	152	6	204	0	.	.
ZNF292	23036	bcgsc.ca	37	6	87964665	87964665	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF292	NM_015021	exon8	c.T1318C	p.W440R	.	.	71	4	116	0	.	72
ZNF292	23036	bcgsc.ca	37	6	87968801	87968801	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF292	NM_015021	exon8	c.C5454A	p.V1818V	.	.	75	4	189	0	.	72
ZNF330	27309	bcgsc.ca	37	4	142153710	142153710	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF330	NM_014487	exon9	c.A602G	p.K201R	.	.	80	4	337	2	.	90
ZNF33B	7582	bcgsc.ca	37	10	43089936	43089936	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF33B	NM_006955	exon5	c.A462G	p.E154E	.	.	84	4	218	0	.	90
ZNF347	84671	bcgsc.ca	37	19	53643976	53643976	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF347	NM_001172675	exon5	c.T2108C	p.V703A	.	.	109	5	255	2	.	90
ZNF385C	201181	bcgsc.ca	37	17	40179740	40179740	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF385C	NM_001242704	exon7	c.A934G	p.S312G	.	.	65	4	70	0	.	22
ZNF423	23090	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	49671299	49671299	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF423	NM_015069	exon4	c.C1764A	p.H588Q	.	.	447	160	517	0	.	228
ZNF426	79088	bcgsc.ca	37	19	9641723	9641723	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF426	NM_024106	exon7	c.A346G	p.T116A	.	.	79	5	161	0	.	91
ZNF429	353088	bcgsc.ca	37	19	21720550	21720550	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF429	NM_001001415	exon4	c.C1695T	p.Y565Y	.	.	87	5	105	0	.	516
ZNF462	58499	bcgsc.ca	37	9	109691149	109691149	+	Silent	SNP	C	C	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF462	NM_021224	exon3	c.C4956T	p.S1652S	.	.	121	5	133	0	.	95
ZNF470	388566	bcgsc.ca	37	19	57085798	57085798	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF470	NM_001001668	exon4	c.T96C	p.F32F	.	.	138	5	241	0	.	92
ZNF471	57573	bcgsc.ca	37	19	57036228	57036228	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF471	NM_020813	exon5	c.T792C	p.C264C	.	.	74	4	108	0	.	154
ZNF512B	57473	ucsc.edu;bcgsc.ca	37	20	62592677	62592677	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF512B	NM_020713	exon16	c.G2412T	p.L804L	.	.	33	4	46	0	.	90
ZNF521	25925	ucsc.edu;bcgsc.ca	37	18	22775197	22775197	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF521	NM_015461	exon5	c.T3585C	p.Y1195Y	.	.	33	4	121	0	.	275
ZNF529	57711	bcgsc.ca	37	19	37037782	37037782	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF529	NM_001145649	exon6	c.A1678G	p.K560E	.	.	143	5	170	0	.	67
ZNF584	201514	bcgsc.ca	37	19	58928855	58928855	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF584	NM_173548	exon4	c.A970G	p.R324G	.	.	127	5	120	0	.	90
ZNF595	152687	bcgsc.ca	37	4	86122	86122	+	RNA	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	.	.	.	.	.	.	61	4	83	0	.	.
ZNF619	285267	bcgsc.ca	37	3	40528299	40528299	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF619	NM_001145082	exon6	c.G418T	p.G140C	.	.	85	4	107	0	.	91
ZNF675	171392	bcgsc.ca	37	19	23836161	23836161	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF675	NM_138330	exon4	c.A1574G	p.E525G	.	.	58	4	118	0	.	228
ZNF687	57592	bcgsc.ca	37	1	151259167	151259167	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF687	NM_020832	exon2	c.C400A	p.L134I	.	.	59	5	69	0	.	92
ZNF697	90874	bcgsc.ca	37	1	120166528	120166528	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF697	NM_001080470	exon3	c.T438C	p.H146H	.	.	67	5	91	0	.	23
ZNF697	90874	bcgsc.ca	37	1	120168635	120168635	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF697	NM_001080470	exon2	c.G89T	p.R30M	.	.	193	6	230	0	.	23
ZNF764	92595	bcgsc.ca	37	16	30569427	30569427	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF764	NM_001172679	exon1	c.T77C	p.V26A	.	.	38	4	46	0	.	91
ZNF773	374928	bcgsc.ca	37	19	58018262	58018262	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF773	NM_198542	exon4	c.A799G	p.R267G	.	.	121	7	161	0	.	91
ZNF778	197320	bcgsc.ca	37	16	89294796	89294796	+	Silent	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_001201407	exon7	c.C2100A	p.P700P	.	.	85	4	154	0	.	.
ZNF804B	219578	bcgsc.ca	37	7	88963890	88963890	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF804B	NM_181646	exon4	c.C1594A	p.Q532K	.	.	90	5	314	0	.	101
ZNF827	152485	bcgsc.ca	37	4	146695680	146695680	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF827	NM_178835	exon11	c.T2838C	p.T946T	.	.	92	4	266	2	.	22
ZNF833P	401898	ucsc.edu;bcgsc.ca	37	19	11795991	11795991	+	RNA	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZNF833P	.	.	.	.	.	.	53	5	94	0	.	91
ZNF845	91664	bcgsc.ca	37	19	53856408	53856408	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	NM_138374	exon4	c.G2480T	p.G827V	.	.	153	5	282	0	.	.
ZRANB1	54764	bcgsc.ca	37	10	126631580	126631580	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZRANB1	NM_017580	exon1	c.A518G	p.D173G	.	.	95	4	143	0	.	660
ZSCAN26	7741	bcgsc.ca	37	6	28239866	28239866	+	RNA	SNP	T	T	C	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	.	.	.	.	.	.	78	5	109	0	.	.
ZZEF1	23140	bcgsc.ca	37	17	3937315	3937315	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	ZZEF1	NM_015113	exon40	c.T6578C	p.L2193P	.	.	34	4	133	1	.	93
OR5D14	219436	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	55563794	55563795	+	Missense_Mutation	DNP	GG	GG	TT	novel		TCGA-DD-A1EL-01A-11D-A152-10	TCGA-DD-A1EL-10A-01D-A152-10	GG	GG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d252f328-4583-4e97-9a71-bb2885f06f73	b43d641d-f1b1-474e-9475-a1f2e81835b8	.	.	.	.	.	p.G255L	.	.	.	.	.	.	.	
