Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	TranscriptID	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov_SOL	TVarCov_SOL	NTotCov_SOL	NVarCov_SOL	dbSNPPopFreq	COSMIC_Gene_Freq
ADARB2	105	broad.mit.edu;mdanderson.org	37	10	1779280	1779280	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	ADARB2	NM_018702	exon1	c.C65G	p.S22C	.	.	11	5	14	0	.	153
ADGB	79747	bcgsc.ca	37	6	147067197	147067197	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	.	NM_024694	exon26	c.A3317G	p.K1106R	.	.	47	4	45	0	.	.
ADRB2	154	bcgsc.ca	37	5	148207334	148207334	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	ADRB2	NM_000024	exon1	c.A940G	p.I314V	.	.	126	5	92	0	.	523
ALK	238	broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	29940532	29940532	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	ALK	NM_004304	exon2	c.G699T	p.M233I	.	.	205	58	213	1	.	3833
AMER2	219287	bcgsc.ca	37	13	25744638	25744638	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	.	NM_152704	exon1	c.A1120G	p.S374G	.	.	64	4	56	0	.	.
AMPD2	271	bcgsc.ca	37	1	110171059	110171059	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	AMPD2	NM_004037	exon11	c.A1511G	p.E504G	.	.	77	5	61	0	.	292
ANKRD20A9P	284232	ucsc.edu	37	13	19442031	19442031	+	RNA	SNP	C	C	A	rs2997166		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	.	.	.	.	.	.	.	26	12	18	6	.	.
ANKRD30B	374860	broad.mit.edu;bcgsc.ca	37	18	14851780	14851780	+	Silent	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	ANKRD30B	NM_001145029	exon36	c.T3480C	p.S1160S	.	.	226	8	180	0	.	24
ANKRD36BP2	645784	ucsc.edu	37	2	89103596	89103596	+	RNA	SNP	G	G	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	.	.	.	.	.	.	.	16	10	12	0	.	.
APOB	338	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	21251347	21251347	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	APOB	NM_000384	exon13	c.G1681T	p.A561S	.	.	82	35	86	0	.	175
APOBEC3F	200316	broad.mit.edu	37	22	39441197	39441197	+	Silent	SNP	G	G	A	rs200983508	byfrequency	TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	APOBEC3F	NM_145298	exon3	c.G423A	p.G141G	.	.	141	6	93	1	G|0.998;A|0.002	226
ATR	545	broad.mit.edu	37	3	142275310	142275310	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	ATR	NM_001184	exon9	c.G1993T	p.E665X	.	.	401	5	200	0	.	1139
ATXN2	6311	broad.mit.edu	37	12	111891548	111891548	+	Silent	SNP	A	A	G	rs150506549		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	ATXN2	NM_002973	exon24	c.T3846C	p.A1282A	.	.	91	4	95	0	A|1.000;G|0.000	136
BAI3	577	broad.mit.edu;bcgsc.ca	37	6	70034870	70034870	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	BAI3	NM_001704	exon21	c.T2921A	p.I974N	.	.	85	5	76	0	.	1148
BICD1	636	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	12	32369238	32369238	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	BICD1	NM_001714	exon2	c.G271T	p.E91X	.	.	79	27	98	0	.	153
C16orf87	388272	broad.mit.edu;bcgsc.ca	37	16	46865061	46865061	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	C16orf87	NM_001001436	exon1	c.A1G	p.M1V	.	.	11	6	19	0	.	90
C19orf21	126353	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	758170	758170	+	Silent	SNP	C	C	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	C19orf21	NM_173481	exon2	c.C1224T	p.A408A	.	.	49	17	36	0	.	91
C1orf186	440712	broad.mit.edu	37	1	206239400	206239400	+	Silent	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	C1orf186	NM_001007544	exon6	c.A498G	p.E166E	.	.	153	4	119	0	.	90
C1orf43	25912	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	1	154184948	154184948	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	C1orf43	NM_001098616	exon5	c.C493T	p.R165C	.	.	95	4	88	0	.	90
C2orf42	54980	bcgsc.ca	37	2	70408442	70408442	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	C2orf42	NM_017880	exon3	c.T676C	p.C226R	.	.	87	4	76	0	.	90
C2orf43	60526	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	20939926	20939926	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	C2orf43	NM_021925	exon5	c.A508G	p.M170V	.	.	169	106	110	0	.	90
C2orf49	79074	bcgsc.ca	37	2	105956069	105956069	+	Silent	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	C2orf49	NM_024093	exon2	c.A129G	p.R43R	.	.	134	5	115	0	.	90
C3AR1	719	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	8212610	8212610	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	C3AR1	NM_004054	exon2	c.A172G	p.T58A	.	.	94	37	85	0	.	227
C6orf48	50854	broad.mit.edu;bcgsc.ca	37	6	31807407	31807407	+	Silent	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	C6orf48	NM_001040437	exon5	c.T195C	p.C65C	.	.	128	5	98	0	.	68
CACNA1I	8911	bcgsc.ca	37	22	39994160	39994160	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	CACNA1I	NM_001003406	exon2	c.T241C	p.F81L	.	.	52	4	30	0	.	135
CALML6	163688	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	1847135	1847135	+	Silent	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	CALML6	NM_138705	exon2	c.T39C	p.C13C	.	.	43	4	48	0	.	90
CARD8	22900	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	48718639	48718639	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	CARD8	NM_001184900	exon10	c.G1306T	p.D436Y	.	.	72	26	72	0	.	227
CASP3	836	broad.mit.edu	37	4	185556556	185556556	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	CASP3	NM_004346	exon4	c.A70G	p.S24G	.	.	464	6	290	0	.	659
CCDC168	643677	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	13	103385109	103385109	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	.	NM_001146197	exon4	c.G17938T	p.E5980X	.	.	170	67	154	0	.	.
CCDC180	0	bcgsc.ca	37	9	100071832	100071832	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	.	NM_020893	exon3	c.A338G	p.K113R	.	.	98	4	83	0	.	.
CDH5	1003	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	66434787	66434787	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	CDH5	NM_001795	exon11	c.A1705G	p.S569G	.	.	53	20	61	1	.	525
CEACAM6	4680	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	42266039	42266039	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	CEACAM6	NM_002483	exon4	c.T866C	p.I289T	.	.	150	56	138	0	.	91
CRB1	23418	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	197446818	197446818	+	Missense_Mutation	SNP	A	A	G	rs111761880	bycluster;byfrequency	TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	CRB1	NM_201253	exon12	c.A4030G	p.I1344V	.	.	145	68	144	0	A|0.999;G|0.001	161
CYP4F2	8529	bcgsc.ca	37	19	16001179	16001179	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	CYP4F2	NM_001082	exon6	c.T590C	p.L197P	.	.	83	5	86	0	.	92
DDX31	64794	broad.mit.edu	37	9	135507429	135507429	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	DDX31	NM_022779	exon15	c.A1805T	p.Q602L	.	.	61	3	58	0	.	226
DDX58	23586	bcgsc.ca	37	9	32480215	32480215	+	Splice_Site	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	DDX58	NM_014314	exon13	c.1774+2T>C	.	.	.	97	4	74	0	.	230
DDX58	23586	bcgsc.ca	37	9	32485180	32485180	+	Silent	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	DDX58	NM_014314	exon10	c.A1473G	p.K491K	.	.	49	4	47	0	.	230
DEPDC7	91614	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	11	33037511	33037511	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	DEPDC7	NM_001077242	exon1	c.G10A	p.V4M	.	.	58	20	97	0	.	92
DHX57	90957	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	2	39088480	39088480	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	DHX57	NM_198963	exon5	c.C1072T	p.R358X	.	.	114	41	85	0	.	228
DIMT1	27292	bcgsc.ca	37	5	61697935	61697935	+	Silent	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	.	NM_014473	exon3	c.A168G	p.P56P	.	.	138	5	118	0	.	.
DMBT1	1755	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	124390621	124390621	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	DMBT1	NM_007329	exon46	c.G5783C	p.G1928A	.	.	124	35	136	0	.	494
DNAH17	8632	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	76462860	76462860	+	Silent	SNP	C	C	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	DNAH17	NM_173628	exon56	c.G8817T	p.R2939R	.	.	41	21	37	0	.	142
DNAJC1	64215	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	10	22207780	22207780	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	DNAJC1	NM_022365	exon6	c.G657A	p.W219X	.	.	66	30	49	0	.	226
DPCR1	135656	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	30918729	30918729	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	DPCR1	NM_080870	exon2	c.G2488A	p.A830T	.	.	105	33	91	0	.	90
DUSP14	11072	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	35872856	35872856	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	DUSP14	NM_007026	exon3	c.A482G	p.Y161C	.	.	31	12	36	0	.	226
E2F3	1871	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	20481646	20481646	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	E2F3	NM_001949	exon3	c.G715A	p.V239I	.	.	93	33	84	0	.	414
EIF1AX	1964	broad.mit.edu	37	X	20153893	20153893	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	EIF1AX	NM_001412	exon3	c.A167G	p.K56R	.	.	551	9	532	0	.	131
EIF3H	8667	bcgsc.ca	37	8	117738284	117738284	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	EIF3H	NM_003756	exon2	c.A260G	p.H87R	.	.	83	4	91	0	.	658
EMC1	23065	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	19568867	19568867	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	.	NM_001271427	exon5	c.C481G	p.L161V	.	.	56	27	70	1	.	.
EP400	57634	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	132471242	132471242	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	EP400	NM_015409	exon6	c.C2113T	p.R705W	.	.	40	14	41	0	.	520
FAHD2A	51011	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	96076720	96076720	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	FAHD2A	NM_016044	exon5	c.T631C	p.F211L	.	.	130	57	138	1	.	91
FAM104B	90736	bcgsc.ca	37	X	55185618	55185618	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	FAM104B	NM_138362	exon2	c.A64G	p.T22A	.	.	87	4	77	0	.	130
FAT2	2196	broad.mit.edu	37	5	150931143	150931143	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	FAT2	NM_001447	exon6	c.A4181G	p.D1394G	.	.	107	4	89	1	.	96
FBXO38	81545	bcgsc.ca	37	5	147803577	147803577	+	Silent	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	FBXO38	NM_001271723	exon13	c.A1635G	p.E545E	.	.	130	5	95	0	.	231
FBXW12	285231	bcgsc.ca	37	3	48436041	48436041	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	FBXW12	NM_207102	exon11	c.A1312G	p.M438V	.	.	62	4	46	0	.	226
FGGY	55277	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	60223627	60223627	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	FGGY	NM_001113411	exon16	c.G1609T	p.V537F	.	.	71	27	61	0	.	69
FILIP1L	11259	ucsc.edu	37	3	99567021	99567021	+	RNA	SNP	C	C	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	FILIP1L	.	.	.	.	.	.	184	1	148	0	.	45
FLNB	2317	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	57994556	57994556	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	FLNB	NM_001457	exon1	c.C265G	p.R89G	.	.	88	44	63	0	.	593
FLT3	2322	broad.mit.edu	37	13	28608517	28608517	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	FLT3	NM_004119	exon13	c.T1625C	p.I542T	.	.	163	4	135	0	.	42117
FSD2	123722	bcgsc.ca	37	15	83428301	83428301	+	Silent	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	FSD2	NM_001007122	exon13	c.A2049G	p.T683T	.	.	70	4	108	0	.	90
G6PC2	57818	broad.mit.edu	37	2	169764182	169764182	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	G6PC2	NM_021176	exon5	c.T661C	p.F221L	.	.	254	5	217	1	.	91
GALNT1	2589	bcgsc.ca	37	18	33267149	33267149	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	GALNT1	NM_020474	exon5	c.A859G	p.R287G	.	.	105	5	89	0	.	92
GAREM	64762	bcgsc.ca	37	18	29867191	29867191	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	.	NM_022751	exon4	c.T1369C	p.W457R	.	.	77	4	66	0	.	.
GAST	2520	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	39872101	39872101	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	GAST	NM_000805	exon3	c.C283T	p.R95C	.	.	59	22	63	0	.	22
GCN1L1	10985	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	120578768	120578768	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	GCN1L1	NM_006836	exon45	c.G5889T	p.E1963D	.	.	71	30	58	0	.	94
GIPC3	126326	bcgsc.ca	37	19	3586560	3586560	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	GIPC3	NM_133261	exon2	c.T293C	p.L98P	.	.	54	4	56	1	.	135
GJB1	2705	ucsc.edu;mdanderson.org	37	X	70444424	70444424	+	RNA	SNP	C	C	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	GJB1	.	.	.	.	.	.	91	40	114	0	.	193
GNG12	55970	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	68171260	68171260	+	Splice_Site	SNP	C	C	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	GNG12	NM_018841	exon5	c.94-1G>C	.	.	.	142	33	79	0	.	227
GPRC5B	51704	broad.mit.edu;bcgsc.ca	37	16	19883581	19883581	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	GPRC5B	NM_016235	exon2	c.A587G	p.E196G	.	.	108	6	95	2	.	523
GRID2	2895	broad.mit.edu;bcgsc.ca	37	4	94436382	94436382	+	Silent	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	GRID2	NM_001510	exon13	c.T2013C	p.L671L	.	.	49	4	74	0	.	159
HAPLN2	60484	bcgsc.ca	37	1	156595153	156595153	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	HAPLN2	NM_021817	exon7	c.A1000G	p.T334A	.	.	35	4	42	0	.	90
HIF1A	3091	broad.mit.edu;bcgsc.ca	37	14	62207740	62207740	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	HIF1A	NM_001243084	exon12	c.T1999C	p.S667P	.	.	176	6	115	1	.	1149
HIVEP1	3096	broad.mit.edu	37	6	12162020	12162020	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	HIVEP1	NM_002114	exon8	c.A6836G	p.Q2279R	.	.	105	5	109	0	.	139
HSD17B7	51478	broad.mit.edu	37	1	162773308	162773308	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	HSD17B7	NM_016371	exon6	c.A730G	p.M244V	.	.	349	5	307	0	.	91
HTR1A	3350	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	63256470	63256470	+	Silent	SNP	C	C	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	HTR1A	NM_000524	exon1	c.G1077A	p.L359L	.	.	108	53	97	1	.	94
IDUA	3425	broad.mit.edu;bcgsc.ca	37	4	995816	995816	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	IDUA	NM_000203	exon7	c.C839T	p.A280V	.	.	13	4	17	0	.	91
IFNG	3458	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	68553297	68553297	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	IFNG	NM_000619	exon1	c.C99G	p.N33K	.	.	111	39	124	0	.	90
IGDCC4	57722	broad.mit.edu	37	15	65678310	65678310	+	Silent	SNP	T	T	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	IGDCC4	NM_020962	exon18	c.A3039C	p.P1013P	.	.	44	10	40	7	.	93
IGSF9B	22997	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	133815979	133815979	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	IGSF9B	NM_014987	exon2	c.C239T	p.P80L	.	.	72	31	54	0	.	68
IL1RL2	8808	broad.mit.edu	37	2	102828624	102828624	+	Silent	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	IL1RL2	NM_003854	exon6	c.A714G	p.E238E	.	.	92	3	90	0	.	92
IL21R	50615	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	27460191	27460191	+	Silent	SNP	C	C	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	IL21R	NM_181079	exon10	c.C1270T	p.L424L	.	.	91	39	48	0	.	660
IL21R	50615	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	27460214	27460214	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	IL21R	NM_181079	exon10	c.G1293T	p.E431D	.	.	84	30	45	0	.	660
IQCH	64799	bcgsc.ca	37	15	67768126	67768126	+	Silent	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	IQCH	NM_001031715	exon18	c.T2769C	p.C923C	.	.	137	5	153	1	.	94
IRAK4	51135	broad.mit.edu	37	12	44180225	44180225	+	Silent	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	IRAK4	NM_016123	exon11	c.A1212G	p.E404E	.	.	142	4	110	0	.	1366
ITPR2	3709	bcgsc.ca	37	12	26808666	26808666	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	ITPR2	NM_002223	exon20	c.A2564G	p.K855R	.	.	52	4	76	0	.	542
JMJD8	339123	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	733364	733364	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	JMJD8	NM_001005920	exon6	c.G532A	p.G178S	.	.	87	54	80	0	.	67
KANSL1	284058	broad.mit.edu	37	17	44116035	44116035	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	.	NM_001193466	exon10	c.G2410A	p.D804N	.	.	75	3	81	0	.	.
KCNA2	3737	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	111147255	111147255	+	Silent	SNP	G	G	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	KCNA2	NM_001204269	exon3	c.C150A	p.T50T	.	.	102	46	105	0	.	91
KCNS3	3790	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	18113077	18113077	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	KCNS3	NM_002252	exon3	c.G802T	p.A268S	.	.	153	60	140	0	.	94
KEL	3792	hgsc.bcm.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	142651031	142651031	+	Missense_Mutation	SNP	C	C	T	rs191311545		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	KEL	NM_000420	exon9	c.G937A	p.A313T	.	.	53	29	36	0	C|0.999;T|0.001	93
KIAA1609	57707	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	84513531	84513531	+	Silent	SNP	C	C	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	KIAA1609	NM_020947	exon8	c.G1359A	p.P453P	.	.	78	26	76	0	.	92
KLRC4-KLRK1	0	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	12	10525808	10525808	+	Nonsense_Mutation	SNP	T	T	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	.	NM_001199805	exon13	c.A556T	p.K186X	.	.	146	58	149	0	.	.
LCA5L	150082	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	21	40794906	40794907	+	Frame_Shift_Ins	INS	-	-	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	LCA5L	NM_152505	exon5	c.833_834insA	p.I278fs	.	.	239	74	174	0	.	22
LEPREL1	55214	broad.mit.edu	37	3	189691718	189691718	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	LEPREL1	NM_018192	exon10	c.A1528G	p.T510A	.	.	259	5	123	1	.	155
LINGO2	158038	broad.mit.edu;bcgsc.ca	37	9	27950509	27950509	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	LINGO2	NM_001258282	exon7	c.G161T	p.G54V	.	.	257	9	226	0	.	516
LMOD3	56203	broad.mit.edu	37	3	69168641	69168641	+	Silent	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	LMOD3	NM_198271	exon2	c.T865C	p.L289L	.	.	127	6	143	0	.	23
LOC650368	0	broad.mit.edu	37	11	3424836	3424836	+	RNA	SNP	G	G	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	.	.	.	.	.	.	.	220	4	201	1	.	.
LPIN2	9663	broad.mit.edu	37	18	2951256	2951256	+	Silent	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	LPIN2	NM_014646	exon4	c.A387G	p.E129E	.	.	173	4	146	0	.	227
LRIG1	26018	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	66502014	66502014	+	Missense_Mutation	SNP	C	C	T	rs149854215		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	LRIG1	NM_015541	exon3	c.G334A	p.A112T	.	.	59	27	56	0	C|0.999;T|0.000	230
M1AP	130951	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	74785860	74785860	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	.	NM_138804	exon11	c.G1576A	p.D526N	.	.	123	64	114	0	.	.
MICAL2	9645	bcgsc.ca	37	11	12277267	12277267	+	Silent	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	MICAL2	NM_014632	exon23	c.A2925G	p.R975R	.	.	81	5	83	0	.	92
MIR577	693162	mdanderson.org	37	4	115577960	115577960	+	RNA	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	.	.	.	.	.	.	.	11	3	35	0	.	.
MIR583	693168	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	95414907	95414907	+	RNA	SNP	C	C	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	.	.	.	.	.	.	.	90	40	82	0	.	.
MIS18BP1	55320	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	45700393	45700393	+	Silent	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	MIS18BP1	NM_018353	exon8	c.T1545C	p.D515D	.	.	251	101	263	0	.	90
MNDA	4332	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	158812126	158812126	+	Silent	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	MNDA	NM_002432	exon2	c.T183C	p.C61C	.	.	153	66	137	0	.	94
MORC1	27136	broad.mit.edu	37	3	108780886	108780886	+	Silent	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	MORC1	NM_014429	exon11	c.A915G	p.E305E	.	.	110	4	135	0	.	98
MPDZ	8777	broad.mit.edu	37	9	13183586	13183586	+	Splice_Site	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	MPDZ	NM_003829	exon20	c.2482-2A>G	.	.	.	78	4	90	0	.	231
MRPL20	55052	bcgsc.ca	37	1	1342350	1342350	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	MRPL20	NM_017971	exon2	c.T137C	p.V46A	.	.	27	4	30	0	.	22
MRPL37	51253	bcgsc.ca	37	1	54675767	54675767	+	Silent	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	MRPL37	NM_016491	exon4	c.T795C	p.L265L	.	.	123	5	131	0	.	90
MRPL53	116540	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	2	74699318	74699318	+	Silent	SNP	G	G	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	MRPL53	NM_053050	exon3	c.C267G	p.A89A	.	.	90	37	87	0	.	90
MUC4	4585	broad.mit.edu	37	3	195509171	195509171	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	MUC4	NM_018406	exon2	c.C9280T	p.L3094F	.	.	226	14	91	1	.	90
MUC4	4585	hgsc.bcm.edu	37	3	195518110	195518110	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	MUC4	NM_018406	exon2	c.C341T	p.A114V	.	.	461	20	169	0	.	90
MUC4	4585	hgsc.bcm.edu	37	3	195518119	195518119	+	Missense_Mutation	SNP	A	A	T	rs201789760		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	MUC4	NM_018406	exon2	c.T332A	p.M111K	.	.	458	35	167	0	.	90
NBPF10	100132406	bcgsc.ca	37	1	145296403	145296403	+	Silent	SNP	C	C	T	rs4996269	byfrequency	TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	.	NM_001039703	exon3	c.C325T	p.L109L	.	.	63	8	72	1	C|0.959;T|0.041	.
NEK9	91754	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	75580093	75580093	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	NEK9	NM_033116	exon8	c.G887A	p.R296K	.	.	159	28	97	0	.	359
NFE2	4778	broad.mit.edu	37	12	54686858	54686858	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	NFE2	NM_001261461	exon4	c.A422G	p.D141G	.	.	123	6	97	1	.	226
NFKBID	84807	bcgsc.ca	37	19	36380841	36380841	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	NFKBID	NM_139239	exon11	c.A839T	p.E280V	.	.	24	4	25	0	.	90
NGLY1	55768	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	25805746	25805746	+	Silent	SNP	A	A	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	NGLY1	NM_018297	exon3	c.T303A	p.I101I	.	.	216	91	191	0	.	135
NIPAL2	79815	bcgsc.ca	37	8	99217442	99217442	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	NIPAL2	NM_024759	exon7	c.T688C	p.S230P	.	.	65	4	52	0	.	90
NRP1	8829	bcgsc.ca	37	10	33481330	33481330	+	Silent	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	NRP1	NM_003873	exon13	c.T1941C	p.G647G	.	.	112	5	104	0	.	525
NRXN3	9369	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	80328058	80328058	+	Silent	SNP	C	C	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	NRXN3	NM_004796	exon17	c.C2937A	p.I979I	.	.	60	30	56	0	.	587
NUDT16P1	152195	broad.mit.edu;bcgsc.ca	37	3	131081026	131081026	+	RNA	SNP	G	G	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	.	.	.	.	.	.	.	13	4	21	0	.	.
OLFML3	56944	broad.mit.edu;bcgsc.ca	37	1	114523194	114523194	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	OLFML3	NM_020190	exon2	c.A355G	p.T119A	.	.	164	6	148	0	.	68
OR10T2	128360	broad.mit.edu	37	1	158368389	158368389	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	OR10T2	NM_001004475	exon1	c.T868C	p.Y290H	.	.	88	4	90	0	.	70
OR51E1	143503	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	4674237	4674237	+	Missense_Mutation	SNP	C	C	T	rs137885627		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	OR51E1	NM_152430	exon2	c.C481T	p.P161S	.	.	70	29	96	0	C|0.999;T|0.000	114
OR56B4	196335	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	11	6129479	6129479	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	OR56B4	NM_001005181	exon1	c.G471T	p.R157S	.	.	110	47	81	0	.	68
PARN	5073	bcgsc.ca	37	16	14687207	14687207	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	PARN	NM_002582	exon13	c.T869C	p.L290P	.	.	65	4	36	0	.	24
PCDHGA5	56110	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	140745170	140745170	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	PCDHGA5	NM_032054	exon1	c.A1273G	p.M425V	.	.	61	29	61	1	.	35
PDE4DIP	9659	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	1	144912287	144912287	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	PDE4DIP	NM_001002811	exon11	c.C2477T	p.A826V	.	.	189	41	133	0	.	663
PHEX	5251	broad.mit.edu	37	X	22245685	22245685	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	PHEX	NM_000444	exon20	c.T2027C	p.I676T	.	.	195	5	168	0	.	132
PIK3C2B	5287	hgsc.bcm.edu;bcgsc.ca	37	1	204394045	204394058	+	Frame_Shift_Del	DEL	GCTCTCGCAGGCGG	GCTCTCGCAGGCGG	-	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	GCTCTCGCAGGCGG	GCTCTCGCAGGCGG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	PIK3C2B	NM_002646	exon34	c.4827_4840del	p.1609_1614del	.	.	76	32	77	1	.	1310
PIWIL1	9271	bcgsc.ca	37	12	130830917	130830917	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	PIWIL1	NM_004764	exon5	c.T319C	p.S107P	.	.	68	4	51	0	.	92
PLA2G4F	255189	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	42437866	42437866	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	PLA2G4F	NM_213600	exon16	c.G1687A	p.A563T	.	.	57	29	50	0	.	94
PLEC	5339	bcgsc.ca	37	8	144993297	144993297	+	Silent	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	PLEC	NM_201380	exon32	c.A11103G	p.R3701R	.	.	53	4	44	0	.	141
POLDIP3	84271	bcgsc.ca	37	22	42992325	42992325	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	POLDIP3	NM_032311	exon5	c.T680C	p.L227P	.	.	83	4	139	0	.	90
POTEE	445582	hgsc.bcm.edu	37	2	132021205	132021207	+	In_Frame_Del	DEL	CCC	CCC	-	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	CCC	CCC	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	.	NM_001083538	exon15	c.2177_2179del	p.726_727del	.	.	267	73	280	0	.	.
PPP4R4	57718	hgsc.bcm.edu;bcgsc.ca	37	14	94697004	94697004	+	Silent	SNP	G	G	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	PPP4R4	NM_058237	exon4	c.G375A	p.V125V	.	.	82	5	64	0	.	94
PRDM2	7799	broad.mit.edu;mdanderson.org	37	1	14075915	14075915	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	PRDM2	NM_015866	exon6	c.A444G	p.I148M	.	.	11	6	17	0	.	116
PRELID1	27166	bcgsc.ca	37	5	176733138	176733138	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	PRELID1	NM_013237	exon4	c.A472G	p.T158A	.	.	175	6	94	0	.	90
PSMC2	5701	bcgsc.ca	37	7	103004678	103004678	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	PSMC2	NM_002803	exon8	c.G680T	p.R227L	.	.	81	4	91	0	.	90
PYCARD	29108	broad.mit.edu;ucsc.edu;mdanderson.org	37	16	31212988	31212988	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	PYCARD	NM_013258	exon3	c.G506A	p.W169X	.	.	26	6	30	0	.	651
RASD1	51655	broad.mit.edu;bcgsc.ca;mdanderson.org	37	17	17398678	17398678	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	RASD1	NM_016084	exon2	c.C607T	p.P203S	.	.	16	14	22	0	.	659
RCBTB1	55213	bcgsc.ca	37	13	50140805	50140805	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	RCBTB1	NM_018191	exon4	c.A226G	p.I76V	.	.	70	4	91	0	.	91
RFPL2	10739	hgsc.bcm.edu;bcgsc.ca	37	22	32588963	32588963	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	RFPL2	NM_001098527	exon4	c.C482T	p.A161V	.	.	156	7	125	0	.	91
RGPD8	727851	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	2	113147588	113147588	+	Silent	SNP	A	A	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	.	NM_001164463	exon20	c.T2934G	p.T978T	.	.	668	43	594	0	.	.
RNF19B	127544	broad.mit.edu	37	1	33407908	33407908	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	RNF19B	NM_153341	exon7	c.T1558C	p.S520P	.	.	94	4	105	0	.	68
ROBO4	54538	bcgsc.ca	37	11	124763815	124763815	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	ROBO4	NM_019055	exon9	c.T1445C	p.L482P	.	.	56	4	58	0	.	92
RP1	6101	broad.mit.edu	37	8	55539804	55539804	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	RP1	NM_006269	exon4	c.T3362C	p.I1121T	.	.	180	4	140	0	.	102
RPP30	10556	bcgsc.ca	37	10	92655649	92655649	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	RPP30	NM_006413	exon9	c.A592G	p.R198G	.	.	166	5	155	0	.	226
RSC1A1	6248	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	15986764	15986764	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	RSC1A1	NM_006511	exon1	c.C401A	p.S134Y	.	.	134	65	128	0	.	91
RUFY4	285180	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	218940360	218940360	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	RUFY4	NM_198483	exon9	c.C1145T	p.T382I	.	.	149	76	77	0	.	46
RYR2	6262	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	237758830	237758830	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	RYR2	NM_001035	exon34	c.C4469T	p.A1490V	.	.	130	61	126	1	.	158
SAFB	6294	bcgsc.ca	37	19	5645346	5645346	+	Splice_Site	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	SAFB	NM_001201339	exon5	c.547-2A>G	.	.	.	77	4	82	0	.	228
SDCBP	6386	bcgsc.ca	37	8	59490764	59490764	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	SDCBP	NM_001007067	exon6	c.A575G	p.D192G	.	.	110	5	86	0	.	90
SGSM1	129049	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	25275471	25275471	+	Silent	SNP	C	C	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	SGSM1	NM_133454	exon15	c.C1638A	p.I546I	.	.	90	44	84	0	.	27
SLC26A5	375611	bcgsc.ca	37	7	103020989	103020989	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	SLC26A5	NM_206883	exon15	c.T1522C	p.Y508H	.	.	114	5	85	0	.	91
SLC38A1	81539	bcgsc.ca	37	12	46598149	46598149	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	SLC38A1	NM_030674	exon11	c.A757G	p.T253A	.	.	166	6	142	0	.	518
SLC5A12	159963	bcgsc.ca	37	11	26695013	26695013	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	SLC5A12	NM_178498	exon14	c.T1643C	p.F548S	.	.	77	4	51	0	.	92
SMARCA1	6594	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	X	128641995	128641995	+	Nonsense_Mutation	SNP	T	T	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	SMARCA1	NM_139035	exon7	c.A889T	p.K297X	.	.	349	139	362	1	.	230
SMEK2	57223	bcgsc.ca	37	2	55786098	55786098	+	Missense_Mutation	SNP	T	T	C	rs202165246		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	SMEK2	NM_001122964	exon16	c.A2267G	p.E756G	.	.	112	5	121	1	T|0.999;C|0.001	228
SNAI1	6615	broad.mit.edu	37	20	48600527	48600527	+	Silent	SNP	C	C	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	SNAI1	NM_005985	exon2	c.C249T	p.P83P	.	.	73	3	40	0	.	227
SOGA3	387104	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	6	127796693	127796693	+	Silent	SNP	G	G	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	.	NM_001012279	exon6	c.C2478T	p.G826G	.	.	26	10	24	0	.	.
SPEG	10290	broad.mit.edu	37	2	220346079	220346079	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	SPEG	NM_005876	exon27	c.A5423G	p.N1808S	.	.	109	4	91	0	.	383
SPTBN1	6711	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	54859819	54859819	+	Silent	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	SPTBN1	NM_003128	exon17	c.T3681C	p.A1227A	.	.	141	54	96	0	.	140
SSPO	23145	broad.mit.edu	37	7	149528276	149528276	+	Silent	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	.	NM_198455	exon108	c.A15192G	p.K5064K	.	.	144	5	132	1	.	.
STIM1	6786	broad.mit.edu;bcgsc.ca	37	11	4091372	4091372	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	STIM1	NM_003156	exon6	c.A730G	p.M244V	.	.	122	5	116	0	.	91
TAOK3	51347	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	118639247	118639247	+	Silent	SNP	G	G	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	TAOK3	NM_016281	exon12	c.C841A	p.R281R	.	.	115	40	115	0	.	933
TBC1D29	26083	ucsc.edu	37	17	28887667	28887667	+	Silent	SNP	T	T	C	rs78888987	byfrequency	TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	TBC1D29	NM_015594	exon3	c.T111C	p.D37D	.	.	44	5	65	1	T|0.934;C|0.066	22
TBP	6908	broad.mit.edu	37	6	170871055	170871055	+	Silent	SNP	G	G	A	rs112928724		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	TBP	NM_003194	exon3	c.G231A	p.Q77Q	.	.	59	7	57	2	G|0.500;A|0.500	91
TEX11	56159	bcgsc.ca	37	X	69964016	69964016	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	TEX11	NM_001003811	exon11	c.T791C	p.L264P	.	.	145	6	123	0	.	178
THSD7A	221981	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	11676308	11676308	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	THSD7A	NM_015204	exon2	c.G471C	p.E157D	.	.	101	34	82	0	.	71
TMEM100	55273	broad.mit.edu;bcgsc.ca	37	17	53798239	53798239	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	TMEM100	NM_001099640	exon4	c.T193C	p.F65L	.	.	73	4	80	0	.	68
TMPRSS6	164656	broad.mit.edu	37	22	37462176	37462176	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	TMPRSS6	NM_153609	exon18	c.G2380A	p.G794S	.	.	121	3	36	0	.	292
TNKS1BP1	85456	bcgsc.ca	37	11	57077950	57077950	+	Silent	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	TNKS1BP1	NM_033396	exon6	c.T2235C	p.P745P	.	.	19	3	34	0	.	91
TPCN1	53373	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	113704076	113704076	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	TPCN1	NM_001143819	exon5	c.T545C	p.L182P	.	.	60	26	45	0	.	93
TRIP11	9321	broad.mit.edu	37	14	92470045	92470045	+	Silent	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	TRIP11	NM_004239	exon11	c.T4275C	p.S1425S	.	.	347	5	331	0	.	1400
TSHZ1	10194	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	18	72998476	72998476	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	TSHZ1	NM_005786	exon2	c.G979A	p.A327T	.	.	79	34	79	0	.	90
TSNAXIP1	55815	broad.mit.edu	37	16	67858633	67858633	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	TSNAXIP1	NM_018430	exon6	c.T467C	p.L156P	.	.	178	4	145	0	.	90
TTN	7273	bcgsc.ca	37	2	179517644	179517644	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	TTN	NM_001267550	exon200	c.A38890T	p.I12964L	.	.	114	42	99	0	.	636
TXNIP	10628	broad.mit.edu	37	1	145440749	145440749	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	TXNIP	NM_006472	exon6	c.A949G	p.M317V	.	.	93	4	66	0	.	92
UBA6	55236	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	68539451	68539451	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	UBA6	NM_018227	exon7	c.C510G	p.I170M	.	.	82	38	90	1	.	90
UBR2	23304	bcgsc.ca	37	6	42541637	42541637	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	UBR2	NM_001184801	exon2	c.C244T	p.P82S	.	.	102	5	78	0	.	94
USP16	10600	bcgsc.ca	37	21	30419464	30419464	+	Silent	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	USP16	NM_006447	exon14	c.A1833G	p.E611E	.	.	114	4	82	0	.	659
VTN	7448	bcgsc.ca	37	17	26695640	26695640	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	VTN	NM_000638	exon6	c.A881G	p.E294G	.	.	60	4	42	0	.	227
WDR12	55759	broad.mit.edu	37	2	203747441	203747441	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	WDR12	NM_018256	exon12	c.A1187G	p.D396G	.	.	260	5	220	0	.	90
XPO7	23039	bcgsc.ca	37	8	21856326	21856326	+	Silent	SNP	C	C	T	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	XPO7	NM_015024	exon22	c.C2406T	p.T802T	.	.	48	4	101	1	.	273
ZBTB11	27107	broad.mit.edu;bcgsc.ca	37	3	101371359	101371359	+	Silent	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	ZBTB11	NM_014415	exon10	c.A2625G	p.R875R	.	.	191	6	175	0	.	91
ZKSCAN5	23660	bcgsc.ca	37	7	99129480	99129480	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	ZKSCAN5	NM_145102	exon7	c.A2128G	p.I710V	.	.	75	4	79	0	.	91
ZNF132	7691	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	19	58944869	58944870	+	Frame_Shift_Del	DEL	CT	CT	-	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	CT	CT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	ZNF132	NM_003433	exon3	c.1941_1942del	p.647_648del	.	.	76	30	69	0	.	92
ZNF134	7693	bcgsc.ca	37	19	58132595	58132595	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	ZNF134	NM_003435	exon3	c.A1108G	p.R370G	.	.	74	4	65	0	.	226
ZNF175	7728	broad.mit.edu	37	19	52089881	52089881	+	Silent	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	ZNF175	NM_007147	exon5	c.A297G	p.E99E	.	.	88	4	92	0	.	90
ZNF273	10793	bcgsc.ca	37	7	64389195	64389195	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	ZNF273	NM_021148	exon4	c.T1489C	p.W497R	.	.	69	4	54	0	.	90
ZNF385C	201181	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	40179065	40179065	+	Silent	SNP	G	G	T	rs71373480	alternate_allele	TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	ZNF385C	NM_001242704	exon8	c.C1125A	p.I375I	.	.	90	39	82	0	G|0.500;A|0.500	22
ZNF534	147658	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	52938382	52938382	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	ZNF534	NM_001143939	exon3	c.G230A	p.R77K	.	.	104	44	143	0	.	68
ZNF568	374900	bcgsc.ca	37	19	37440967	37440967	+	Silent	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	ZNF568	NM_198539	exon7	c.A912G	p.K304K	.	.	72	4	68	0	.	136
ZNF814	730051	mdanderson.org	37	19	58385762	58385762	+	Silent	SNP	C	C	G	rs199732634		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	.	NM_001144989	exon3	c.G996C	p.S332S	.	.	226	62	147	2	.	.
ZNF843	283933	bcgsc.ca	37	16	31447959	31447959	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A3A5-01A-11D-A22F-10	TCGA-DD-A3A5-11A-11D-A22F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	9d536aaa-3e77-409a-a97c-a0e525c3a267	634467ec-6024-4df4-9b0a-399177ac8ba2	.	ZNF843	NM_001136509	exon2	c.T212C	p.L71P	.	.	50	5	46	3	.	68
