Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	TranscriptID	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov_SOL	TVarCov_SOL	NTotCov_SOL	NVarCov_SOL	dbSNPPopFreq	COSMIC_Gene_Freq
AAR2	25980	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	34828009	34828009	+	Silent	SNP	T	T	A	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	.	NM_001271874	exon2	c.T219A	p.P73P	.	.	152	65	93	1	.	.
AASDH	132949	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	57244474	57244474	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	AASDH	NM_181806	exon4	c.A508C	p.I170L	.	.	108	46	109	0	.	94
ACAA1	30	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	38168072	38168072	+	Missense_Mutation	SNP	C	C	T	rs115896366		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	ACAA1	NM_001607	exon8	c.G746A	p.R249H	.	.	227	103	167	0	C|1.000;T|0.000	91
ACOT12	134526	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	80628350	80628350	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	ACOT12	NM_130767	exon13	c.A1337G	p.D446G	.	.	100	42	76	0	.	92
ADGB	79747	broad.mit.edu	37	6	147049868	147049868	+	Silent	SNP	G	G	A	rs75979512	byfrequency	TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	.	NM_024694	exon20	c.G2511A	p.Q837Q	.	.	93	3	54	1	G|0.733;A|0.267	.
ADNP	23394	broad.mit.edu;ucsc.edu;bcgsc.ca	37	20	49509730	49509730	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	ADNP	NM_015339	exon5	c.G1521A	p.M507I	.	.	229	73	164	2	.	92
AGAP2	116986	hgsc.bcm.edu	37	12	58121724	58121738	+	In_Frame_Del	DEL	ACCTTGCTGCTCTCA	ACCTTGCTGCTCTCA	-	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	ACCTTGCTGCTCTCA	ACCTTGCTGCTCTCA	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	AGAP2,brain,glioma,-1	AGAP2	NM_001122772	exon15	c.2748_2762del	p.916_921del	.	.	67	0	66	0	.	716
ATP8A2	51761	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	26145823	26145823	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	ATP8A2	NM_016529	exon18	c.T1655C	p.I552T	.	.	63	28	69	0	.	138
AVEN	57099	bcgsc.ca	37	15	34159986	34159986	+	Missense_Mutation	SNP	T	T	C	rs2241647	byfrequency	TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	AVEN	NM_020371	exon5	c.A683G	p.Q228R	.	.	57	4	48	0	T|0.939;C|0.061	651
B4GALT2	8704	ucsc.edu	37	1	44446929	44446929	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	B4GALT2	NM_030587	exon2	c.G184A	p.D62N	.	.	35	4	24	0	.	92
BDNF	627	ucsc.edu	37	11	27681176	27681176	+	RNA	SNP	C	C	G	rs28722151	byfrequency	TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	BDNF	.	.	.	.	.	.	82	45	67	31	C|0.750;G|0.250	514
C12orf68	387856	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	12	48577984	48577984	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	C12orf68	NM_001013635	exon1	c.G79C	p.A27P	.	.	15	6	23	0	.	90
CD4	920	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	6927621	6927621	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	CD4	NM_000616	exon8	c.G1191T	p.M397I	.	.	44	26	43	0	.	90
CDKN1A	1026	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	36652323	36652323	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	CDKN1A	NM_001220778	exon2	c.G445C	p.D149H	.	.	154	116	55	0	.	872
CEACAM6	4680	bcgsc.ca	37	19	42260742	42260742	+	Missense_Mutation	SNP	C	C	T	rs141329594	byfrequency	TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	CEACAM6	NM_002483	exon2	c.C299T	p.T100I	.	.	433	28	360	4	C|0.996;T|0.004	91
CELF3	11189	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	151688481	151688481	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	CELF3	NM_007185	exon1	c.G16C	p.A6P	.	.	122	53	58	0	.	91
CEP120	153241	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	5	122722352	122722353	+	Frame_Shift_Del	DEL	AT	AT	-	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	AT	AT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	CEP120	NM_153223	exon11	c.1439_1440del	p.480_480del	.	.	66	29	58	0	.	91
CHD7	55636	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	61749438	61749438	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	CHD7	NM_017780	exon17	c.G4052A	p.R1351K	.	.	144	62	99	0	.	141
CLTCL1	8218	ucsc.edu;bcgsc.ca	37	22	19220768	19220768	+	Missense_Mutation	SNP	C	C	G	rs116398959	alternate_allele	TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	CLTCL1	NM_001835	exon9	c.G1442C	p.R481P	.	.	185	81	93	1	C|0.996;T|0.004	230
CNGA3	1261	broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	99012481	99012481	+	Missense_Mutation	SNP	G	G	T	rs104893614	bycluster;alternate_allele	TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	CNGA3	NM_001298	exon8	c.G848T	p.R283L	.	.	238	125	180	1	G|1.000;A|0.000	96
COG5	10466	ucsc.edu	37	7	106888867	106888867	+	Silent	SNP	G	G	A	rs35581984	byfrequency	TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	COG5	NM_006348	exon17	c.C1920T	p.I640I	.	.	39	4	26	0	G|0.968;A|0.032	93
COL22A1	169044	hgsc.bcm.edu	37	8	139824126	139824126	+	Silent	SNP	G	G	A	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	COL22A1	NM_152888	exon9	c.C1365T	p.P455P	.	.	31	1	18	0	.	103
COPS7B	64708	bcgsc.ca	37	2	232653358	232653358	+	Silent	SNP	C	C	T	rs11557625	byfrequency	TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	COPS7B	NM_022730	exon2	c.C78T	p.A26A	.	.	54	4	99	0	C|0.988;T|0.012	228
CROCCP2	84809	broad.mit.edu;bcgsc.ca	37	1	16945481	16945481	+	RNA	SNP	G	G	A	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	.	.	.	.	.	.	.	396	60	333	0	.	.
CTSG	1511	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	14	25044580	25044580	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	CTSG	NM_001911	exon2	c.94delC	p.R32fs	.	.	73	34	38	0	.	92
CUBN	8029	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	17026254	17026254	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	CUBN	NM_001081	exon30	c.T4375C	p.S1459P	.	.	122	45	89	0	.	166
DDX5	1655	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	62496261	62496261	+	Missense_Mutation	SNP	T	T	C	rs200823006		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	DDX5	NM_004396	exon13	c.A1625G	p.N542S	.	.	128	40	110	0	T|0.999;C|0.000	228
DMBT1	1755	ucsc.edu	37	10	124333260	124333260	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	DMBT1	NM_007329	exon6	c.G265T	p.E89X	.	.	129	99	173	3	.	494
DNAH12	201625	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	57475398	57475398	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	DNAH12	NM_178504	exon12	c.T1352A	p.L451H	.	.	49	18	39	0	.	47
EPB41L4A	64097	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	111643179	111643179	+	Silent	SNP	C	C	G	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	EPB41L4A	NM_022140	exon2	c.G108C	p.T36T	.	.	102	47	72	0	.	91
EPS8L1	54869	bcgsc.ca;mdanderson.org	37	19	55587822	55587822	+	Missense_Mutation	SNP	G	G	A	rs12609976	byfrequency	TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	EPS8L1	NM_133180	exon2	c.G10A	p.A4T	.	.	104	39	88	1	G|0.878;A|0.122	115
EZR	7430	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	159206580	159206580	+	Silent	SNP	G	G	T	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	EZR	NM_003379	exon4	c.C228A	p.L76L	.	.	202	78	128	0	.	70
FAM205A	259308	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	34726986	34726986	+	Splice_Site	SNP	C	C	A	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	.	NM_001141917	exon5	c.252-1G>T	.	.	.	43	21	36	0	.	.
FLG2	388698	ucsc.edu;bcgsc.ca	37	1	152326984	152326984	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	FLG2	NM_001014342	exon3	c.G3278A	p.G1093E	.	.	409	168	247	3	.	151
GEN1	348654	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	17954051	17954051	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	GEN1	NM_182625	exon8	c.A953G	p.K318R	.	.	63	31	82	0	.	359
GLYAT	10249	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	58491955	58491955	+	Silent	SNP	C	C	T	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	GLYAT	NM_005838	exon2	c.G15A	p.L5L	.	.	76	21	27	0	.	90
GOLGA3	2802	bcgsc.ca	37	12	133384864	133384864	+	Missense_Mutation	SNP	G	G	A	rs3741486	byfrequency	TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	GOLGA3	NM_001172557	exon5	c.C791T	p.P264L	.	.	154	8	122	1	G|0.802;A|0.198	95
GORAB	92344	hgsc.bcm.edu;broad.mit.edu;mdanderson.org	37	1	170508682	170508682	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	GORAB	NM_152281	exon2	c.C468A	p.C156X	.	.	139	31	54	0	.	90
GPR85	54329	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	112723996	112723996	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	GPR85	NM_001146265	exon3	c.C781A	p.Q261K	.	.	97	20	82	0	.	91
GRM6	2916	broad.mit.edu;ucsc.edu;mdanderson.org	37	5	178408750	178408750	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	GRM6	NM_000843	exon10	c.G2542T	p.E848X	.	.	234	101	98	1	.	588
GRM7	2917	broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	7620178	7620178	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	GRM7	NM_000844	exon8	c.C1585T	p.P529S	.	.	240	88	154	2	.	526
HLA-DRB5	3127	bcgsc.ca	37	6	32487390	32487390	+	Missense_Mutation	SNP	T	T	G	rs77180119	byfrequency	TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	HLA-DRB5	NM_002125	exon3	c.A409C	p.T137P	.	.	243	24	114	3	T|0.300;G|0.700	90
HMGCS1	3157	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	43297200	43297200	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	HMGCS1	NM_001098272	exon5	c.A643G	p.I215V	.	.	121	54	91	0	.	90
IGHMBP2	3508	ucsc.edu	37	11	68671477	68671477	+	Silent	SNP	T	T	C	rs1249463	byfrequency	TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	IGHMBP2	NM_002180	exon1	c.T57C	p.L19L	.	.	19	13	13	1	T|0.304;C|0.696	90
IGSF9	57549	hgsc.bcm.edu	37	1	159898638	159898638	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	IGSF9	NM_001135050	exon19	c.G2540A	p.R847Q	.	.	26	4	13	0	.	156
IQCA1	79781	bcgsc.ca	37	2	237374309	237374309	+	Silent	SNP	C	C	T	rs35432941	byfrequency	TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	IQCA1	NM_001270585	exon6	c.G786A	p.Q262Q	.	.	112	5	135	0	C|0.897;T|0.103	23
ITGB3	3690	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	17	45361990	45361990	+	Silent	SNP	A	A	G	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	ITGB3	NM_000212	exon4	c.A543G	p.A181A	.	.	136	49	122	0	.	714
KIAA1549	57670	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	138602612	138602612	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	KIAA1549	NM_020910	exon2	c.G1760T	p.S587I	.	.	129	61	104	0	.	369
KIF27	55582	broad.mit.edu;bcgsc.ca	37	9	86482765	86482765	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	KIF27	NM_017576	exon13	c.A2768C	p.E923A	.	.	80	32	83	3	.	523
KNTC1	9735	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	12	123055417	123055429	+	Frame_Shift_Del	DEL	TTTCAGATAATTC	TTTCAGATAATTC	-	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	TTTCAGATAATTC	TTTCAGATAATTC	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	KNTC1	NM_014708	exon23	c.1861_1867del	p.621_623del	.	.	65	16	99	0	.	543
KRTAP4-7	100132476	bcgsc.ca	37	17	39240627	39240627	+	Missense_Mutation	SNP	T	T	C	rs189343211		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	.	NM_033061	exon1	c.T169C	p.S57P	.	.	10	5	37	2	.	.
LAMP5	24141	bcgsc.ca	37	20	9496716	9496716	+	Missense_Mutation	SNP	C	C	G	rs2232264	byfrequency	TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	.	NM_012261	exon3	c.C307G	p.Q103E	.	.	65	6	86	0	C|0.731;G|0.269	.
LCORL	254251	hgsc.bcm.edu;bcgsc.ca;mdanderson.org	37	4	17886148	17886148	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	LCORL	NM_001166139	exon7	c.C1004T	p.S335L	.	.	67	15	55	0	.	90
LRP1B	53353	broad.mit.edu;bcgsc.ca	37	2	141747101	141747101	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	LRP1B	NM_018557	exon17	c.G2770C	p.A924P	.	.	77	31	42	1	.	311
LRRC4C	57689	ucsc.edu;bcgsc.ca	37	11	40136444	40136444	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	LRRC4C	NM_001258419	exon7	c.G1399A	p.D467N	.	.	338	98	171	2	.	521
LSG1	55341	bcgsc.ca	37	3	194373833	194373833	+	Silent	SNP	G	G	A	rs1705991	byfrequency	TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	LSG1	NM_018385	exon8	c.C798T	p.T266T	.	.	201	7	155	1	G|0.418;A|0.582	90
LUM	4060	hgsc.bcm.edu	37	12	91498002	91498002	+	Silent	SNP	G	G	A	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	LUM	NM_002345	exon3	c.C957T	p.T319T	.	.	89	4	64	0	.	514
MIR567	693152	ucsc.edu	37	3	111831665	111831665	+	RNA	SNP	T	T	C	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	.	.	.	.	.	.	.	35	4	33	0	.	.
MSH5	4439	broad.mit.edu	37	6	31730201	31730201	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	MSH5	NM_172165	exon25	c.C2401T	p.Q801X	.	.	210	5	76	0	.	661
MYH4	4622	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	17	10352333	10352333	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	MYH4	NM_017533	exon31	c.G4213T	p.E1405X	.	.	75	24	55	0	.	102
MYH8	4626	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	10304673	10304673	+	Silent	SNP	G	G	A	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	MYH8	NM_002472	exon24	c.C3027T	p.T1009T	.	.	111	51	80	0	.	101
MYOZ1	58529	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	10	75391726	75391726	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	MYOZ1	NM_021245	exon6	c.A862G	p.I288V	.	.	166	7	115	0	.	92
NBEAL2	23218	bcgsc.ca	37	3	47045846	47045846	+	Missense_Mutation	SNP	C	C	T	rs2305637	byfrequency	TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	NBEAL2	NM_015175	exon37	c.C6161T	p.S2054F	.	.	155	6	105	0	C|0.844;T|0.156	69
NCF4	4689	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	37271708	37271708	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	NCF4	NM_000631	exon8	c.G641C	p.G214A	.	.	41	20	36	0	.	91
ND5	0	broad.mit.edu;bcgsc.ca	37	MT	13255	13255	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	.	ENST00000361567	exon1	c.T919C	p.S307P	.	.	24	21	96	0	.	.
NUP205	23165	broad.mit.edu	37	7	135269644	135269644	+	Silent	SNP	C	C	T	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	NUP205	NM_015135	exon8	c.C1107T	p.F369F	.	.	68	4	47	0	.	207
NXF2	56001	hgsc.bcm.edu	37	X	101573497	101573497	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	NXF2	NM_022053	exon9	c.720delC	p.D240fs	.	.	994	141	607	0	.	46
OBSCN	84033	bcgsc.ca	37	1	228444505	228444510	+	In_Frame_Del	DEL	TGCGCA	TGCGCA	-	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	TGCGCA	TGCGCA	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	OBSCN	NM_001271223	exon16	c.4739_4744del	p.1580_1582del	.	.	89	6	111	0	.	403
OR10S1	219873	broad.mit.edu;bcgsc.ca	37	11	123847554	123847554	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	OR10S1	NM_001004474	exon1	c.G845A	p.G282E	.	.	49	5	46	1	.	70
OR2V1	26693	bcgsc.ca	37	5	180552267	180552267	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	.	NM_001258283	exon1	c.T38A	p.F13Y	.	.	94	42	66	2	.	.
OR4C6	219432	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	55433208	55433208	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	OR4C6	NM_001004704	exon1	c.A566G	p.D189G	.	.	123	40	67	1	.	70
OR5M3	219482	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	56237770	56237770	+	Silent	SNP	A	A	G	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	OR5M3	NM_001004742	exon1	c.T204C	p.D68D	.	.	435	67	247	0	.	70
PIK3CA	5290	broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	178952100	178952100	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	PIK3CA,NS,carcinoma,0	PIK3CA	NM_006218	exon21	c.C3155A	p.T1052K	.	.	71	30	102	2	.	27752
PLA2R1	22925	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	160807872	160807872	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	PLA2R1	NM_001195641	exon24	c.G3519T	p.W1173C	.	.	200	86	182	0	.	93
PRDM13	59336	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	6	100062539	100062539	+	Silent	SNP	T	T	C	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	PRDM13	NM_021620	exon4	c.T2028C	p.P676P	.	.	28	6	32	0	.	135
PTEN	5728	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	89717712	89717712	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	PTEN,leg,malignant_melanoma,0	PTEN	NM_000314	exon7	c.C737G	p.P246R	.	.	139	110	193	0	.	17735
RB1	5925	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	13	48919320	48919321	+	Frame_Shift_Ins	INS	-	-	A	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	RB1,retina,retinoblastoma,+1	RB1	NM_000321	exon4	c.485_486insA	p.F162fs	.	.	32	26	40	0	.	3784
RPL22	6146	hgsc.bcm.edu;broad.mit.edu;mdanderson.org	37	1	6257754	6257754	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	RPL22	NM_000983	exon2	c.C75A	p.C25X	.	.	57	36	42	0	.	650
RTEL1	51750	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	62324187	62324187	+	Silent	SNP	C	C	T	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	RTEL1	NM_032957	exon29	c.C2754T	p.D918D	.	.	86	44	65	0	.	44
SBNO2	22904	ucsc.edu	37	19	1113701	1113701	+	Missense_Mutation	SNP	G	G	A	rs2302110	byfrequency	TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	.	NM_014963	exon19	c.C2080T	p.P694S	.	.	36	4	22	0	A|0.162;G|0.838	.
SDK1	221935	broad.mit.edu;ucsc.edu;bcgsc.ca	37	7	4014121	4014121	+	Silent	SNP	C	C	T	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	SDK1	NM_152744	exon13	c.C1938T	p.S646S	.	.	260	123	195	2	.	138
SENP2	59343	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	185332412	185332412	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	SENP2	NM_021627	exon11	c.G994C	p.G332R	.	.	225	91	150	0	.	658
SEPHS2	22928	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	30456131	30456131	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	SEPHS2	.	.	.	.	.	.	181	82	125	0	.	138
SFMBT2	57713	broad.mit.edu	37	10	7239609	7239609	+	Silent	SNP	G	G	A	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	SFMBT2	NM_001029880	exon15	c.C1599T	p.I533I	.	.	104	4	78	0	.	141
SHOX2	6474	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	157820590	157820590	+	Silent	SNP	C	C	G	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	SHOX2	NM_003030	exon3	c.G504C	p.R168R	.	.	225	110	178	0	.	90
SLCO6A1	133482	ucsc.edu;bcgsc.ca	37	5	101795411	101795411	+	Missense_Mutation	SNP	C	C	T	rs140682140	byfrequency	TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	SLCO6A1	NM_173488	exon5	c.G970A	p.V324I	.	.	309	116	242	1	C|0.994;T|0.006	96
SMC4	10051	bcgsc.ca	37	3	160131347	160131347	+	Missense_Mutation	SNP	A	A	G	rs33999879	byfrequency	TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	SMC4	NM_005496	exon7	c.A1067G	p.N356S	.	.	110	7	106	0	A|0.954;G|0.046	291
SPAG6	9576	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	10	22700061	22700070	+	Frame_Shift_Del	DEL	ATACATCAAC	ATACATCAAC	-	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	ATACATCAAC	ATACATCAAC	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	SPAG6	NM_012443	exon10	c.1416_1425del	p.472_475del	.	.	60	17	76	0	.	153
SPAST	6683	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	32341263	32341263	+	Silent	SNP	T	T	C	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	SPAST	NM_014946	exon7	c.T1080C	p.L360L	.	.	54	21	68	0	.	153
SSH3	54961	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	67077629	67077629	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	SSH3	NM_017857	exon13	c.C1502T	p.P501L	.	.	120	38	53	0	.	91
STEAP3	55240	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	120005536	120005536	+	Silent	SNP	A	A	T	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	STEAP3	NM_182915	exon4	c.A804T	p.T268T	.	.	57	27	43	0	.	91
SULT1A1	6817	broad.mit.edu	37	16	28620121	28620121	+	Missense_Mutation	SNP	G	G	A	rs200542791	byfrequency	TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	SULT1A1	NM_177534	exon1	c.C56T	p.P19L	.	.	359	15	251	1	G|0.996;A|0.004	90
THAP3	90326	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	6688628	6688628	+	Silent	SNP	C	C	T	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	THAP3	NM_001195752	exon2	c.C144T	p.P48P	.	.	188	84	116	0	.	514
THRSP	7069	broad.mit.edu	37	11	77775178	77775178	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	THRSP	NM_003251	exon1	c.T251G	p.V84G	.	.	233	79	110	29	.	69
TLL2	7093	broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	98144387	98144387	+	Silent	SNP	G	G	A	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	TLL2	NM_012465	exon16	c.C2151T	p.D717D	.	.	111	46	130	2	.	93
TNN	63923	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	175105078	175105078	+	Splice_Site	SNP	G	G	C	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	TNN	NM_022093	exon16	c.3427+1G>C	.	.	.	191	41	61	0	.	138
TREML2	79865	hgsc.bcm.edu	37	6	41166098	41166098	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	TREML2	NM_024807	exon2	c.C125T	p.S42F	.	.	172	7	64	0	.	91
TREML2	79865	hgsc.bcm.edu	37	6	41166119	41166119	+	Missense_Mutation	SNP	T	T	C	rs76984414		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	TREML2	NM_024807	exon2	c.A104G	p.E35G	.	.	159	7	57	0	.	91
TREML2	79865	hgsc.bcm.edu	37	6	41166123	41166123	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	TREML2	NM_024807	exon2	c.G100A	p.G34R	.	.	157	7	55	0	.	91
TSR3	115939	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	1400190	1400190	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	.	NM_001001410	exon4	c.G572C	p.G191A	.	.	26	11	19	0	.	.
UNC13A	23025	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	17758169	17758169	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	UNC13A	NM_001080421	exon16	c.C1949T	p.A650V	.	.	106	59	77	0	.	25
UNK	85451	bcgsc.ca	37	17	73819525	73819525	+	Silent	SNP	C	C	T	rs8078208	byfrequency	TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	UNK	NM_001080419	exon15	c.C2199T	p.S733S	.	.	121	7	132	1	C|0.528;T|0.472	68
VIT	5212	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	36982183	36982183	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	VIT	NM_001177969	exon5	c.C395T	p.S132F	.	.	244	87	202	0	.	92
WDR59	79726	ucsc.edu	37	16	74942865	74942865	+	Silent	SNP	T	T	C	rs141093453	byfrequency	TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	WDR59	NM_030581	exon17	c.A1653G	p.V551V	.	.	65	13	60	3	T|0.976;C|0.024	92
ZFHX4	79776	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	77618153	77618153	+	Silent	SNP	C	C	T	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	ZFHX4	NM_024721	exon2	c.C1830T	p.G610G	.	.	110	60	92	0	.	98
ZNF385D	79750	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	21467010	21467010	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	ZNF385D	NM_024697	exon6	c.G826A	p.V276I	.	.	215	69	173	1	.	156
ZSWIM4	65249	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	13936368	13936368	+	Silent	SNP	C	C	T	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	ZSWIM4	NM_023072	exon11	c.C1869T	p.D623D	.	.	112	55	73	0	.	90
DNMT1	1786	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	10286294	10286295	+	Splice_Site	DNP	GC	GC	AA	novel		TCGA-DD-A4NE-01A-11D-A27I-10	TCGA-DD-A4NE-11A-11D-A27I-10	GC	GC	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	343fcbc2-f30c-4ffa-a0b3-f5bb21e5e70b	2f595b57-7cf4-4499-bec6-497a4e241e01	.	.	.	.	.	.	.	.	.	.	.	.	.	
