Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	TranscriptID	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov_SOL	TVarCov_SOL	NTotCov_SOL	NVarCov_SOL	dbSNPPopFreq	COSMIC_Gene_Freq
ABCD4	5826	ucsc.edu	37	14	74753481	74753481	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	ABCD4	NM_005050	exon18	c.G1675C	p.E559Q	.	.	27	2	27	0	.	292
ACADL	33	hgsc.bcm.edu;bcgsc.ca	37	2	211069378	211069379	+	Frame_Shift_Ins	INS	-	-	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	ACADL	NM_001608	exon7	c.797_798insA	p.I266fs	.	.	68	12	63	0	.	90
ADAMTS7	11173	broad.mit.edu	37	15	79059076	79059076	+	Missense_Mutation	SNP	A	A	C	rs62012620		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	ADAMTS7	NM_014272	exon19	c.T3177G	p.F1059L	.	.	50	8	43	1	A|0.500;C|0.500	226
ADAMTS7	11173	broad.mit.edu	37	15	79059081	79059081	+	Missense_Mutation	SNP	C	C	T	rs62012621		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	ADAMTS7	NM_014272	exon19	c.G3172A	p.V1058M	.	.	46	8	44	1	C|0.500;T|0.500	226
AKAP3	10566	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	4724998	4724998	+	Silent	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	AKAP3	NM_006422	exon5	c.G2469A	p.S823S	.	.	134	21	96	0	.	292
ANKH	56172	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	14749332	14749332	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	ANKH	NM_054027	exon6	c.T771G	p.I257M	.	.	63	10	59	0	.	91
ARID1B	57492	hgsc.bcm.edu;bcgsc.ca	37	6	157099362	157099362	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	ARID1B	NM_017519	exon1	c.T299A	p.L100H	.	.	36	8	28	0	.	154
BAZ1B	9031	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	72891607	72891607	+	Silent	SNP	G	G	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	BAZ1B	NM_032408	exon7	c.C2184T	p.F728F	.	.	79	21	74	0	.	159
BMS1	9790	broad.mit.edu	37	10	43291973	43291973	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	BMS1	NM_014753	exon10	c.G1281T	p.M427I	.	.	366	6	380	0	.	93
BRIP1	83990	ucsc.edu;bcgsc.ca	37	17	59821818	59821818	+	Silent	SNP	G	G	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	BRIP1	NM_032043	exon15	c.C2232T	p.D744D	.	.	223	37	214	2	.	660
BSN	8927	broad.mit.edu	37	3	49689738	49689738	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	BSN	NM_003458	exon5	c.G2749T	p.A917S	.	.	75	3	72	0	.	97
C2CD4C	126567	hgsc.bcm.edu	37	19	407506	407506	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	C2CD4C	NM_001136263	exon2	c.C856G	p.P286A	.	.	13	7	1	0	.	46
C2orf81	388963	hgsc.bcm.edu	37	2	74642265	74642266	+	In_Frame_Ins	INS	-	-	CGCGGAGGGGCGGGTGGCGCCGCC	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	.	NM_001145054	exon4	c.958_959insGGCGGCGCCACCCGCCCCTCCGCG	p.S320delinsGGATRPSAS	.	.	51	33	32	0	.	.
CAMTA2	23125	broad.mit.edu;bcgsc.ca	37	17	4877747	4877747	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	CAMTA2	NM_001171167	exon12	c.A2018G	p.K673R	.	.	43	16	49	2	.	91
CDC14A	8556	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	100964774	100964774	+	Missense_Mutation	SNP	G	G	A	rs61752469	byfrequency	TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	CDC14A	NM_003672	exon15	c.G1711A	p.G571R	.	.	83	16	91	1	G|0.998;A|0.002	290
CHTOP	26097	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	1	153615718	153615718	+	Missense_Mutation	SNP	G	G	A	rs138105302		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	CHTOP	NM_001206612	exon5	c.G422A	p.R141Q	.	.	145	13	83	0	G|1.000;A|0.000	90
CILP	8483	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	65497772	65497772	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	CILP	NM_003613	exon5	c.A457G	p.S153G	.	.	51	7	45	1	.	97
CNOT3	4849	hgsc.bcm.edu	37	19	54652191	54652191	+	Silent	SNP	C	C	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	CNOT3	NM_014516	exon11	c.C1203A	p.G401G	.	.	85	7	47	0	.	93
CNTNAP3	79937	broad.mit.edu	37	9	39078748	39078748	+	Silent	SNP	T	T	C	rs2990047		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	CNTNAP3	NM_033655	exon22	c.A3612G	p.A1204A	.	.	7	6	9	1	.	91
COL6A5	256076	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	130107781	130107781	+	Silent	SNP	G	G	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	.	NM_153264	exon6	c.G2220A	p.A740A	.	.	120	44	110	0	.	.
CRAMP1L	57585	bcgsc.ca	37	16	1676025	1676025	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	.	NM_020825	exon2	c.C398T	p.A133V	.	.	53	4	45	1	.	.
CTBP1-AS1	92070	broad.mit.edu;ucsc.edu	37	4	1244558	1244558	+	RNA	SNP	G	G	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	.	.	.	.	.	.	.	105	5	60	0	.	.
CTGF	1490	hgsc.bcm.edu	37	6	132271980	132271980	+	Silent	SNP	T	T	G	rs6934749		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	CTGF	NM_001901	exon2	c.A219C	p.P73P	.	.	5	5	0	0	T|0.000;G|1.000	90
DHX35	60625	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	37630379	37630379	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	DHX35	NM_021931	exon9	c.C649T	p.R217W	.	.	53	7	45	0	.	226
DNAJA4	55466	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	78562999	78562999	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	DNAJA4	NM_018602	exon3	c.G380A	p.R127Q	.	.	111	22	83	0	.	226
DPY19L2	283417	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	64057564	64057564	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	DPY19L2	NM_173812	exon3	c.C424T	p.R142W	.	.	392	47	509	0	.	515
DSCR9	257203	broad.mit.edu	37	21	38592566	38592566	+	RNA	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	.	.	.	.	.	.	.	48	7	31	0	.	.
EEA1	8411	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	93170633	93170633	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	EEA1	NM_003566	exon28	c.T4100C	p.V1367A	.	.	83	14	78	0	.	229
EIF3E	3646	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	109240530	109240530	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	EIF3E	NM_001568	exon7	c.G688C	p.D230H	.	.	460	50	251	1	.	188
EPHB1	2047	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	134670256	134670256	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	EPHB1,NS,carcinoma,0	EPHB1	NM_004441	exon3	c.G167A	p.R56H	.	.	74	10	64	0	.	1492
EZH2	2146	broad.mit.edu	37	7	148512600	148512600	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	EZH2	NM_004456	exon13	c.A1544G	p.K515R	.	.	261	5	269	0	.	3699
FAM154A	158297	ucsc.edu;bcgsc.ca;mdanderson.org	37	9	18941666	18941666	+	Silent	SNP	G	G	A	rs34769002	byfrequency	TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	FAM154A	NM_153707	exon3	c.C390T	p.S130S	.	.	86	32	89	0	G|0.986;A|0.014	69
FASN	2194	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	80049392	80049392	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	FASN	NM_004104	exon9	c.G1198A	p.V400M	.	.	159	18	127	0	.	90
FKBP6	8468	broad.mit.edu	37	7	72742655	72742655	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	FKBP6	NM_003602	exon2	c.A135T	p.E45D	.	.	142	3	117	3	.	180
FLJ31813	0	bcgsc.ca	37	10	51819467	51819467	+	RNA	SNP	G	G	C	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	.	.	.	.	.	.	.	551	41	536	1	.	.
GABRA4	2557	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	46976276	46976276	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	GABRA4	NM_000809	exon6	c.T694C	p.S232P	.	.	84	12	80	0	.	156
GPX5	2880	broad.mit.edu	37	6	28501879	28501879	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	GPX5	NM_001509	exon5	c.C601T	p.R201W	.	.	126	16	87	2	.	91
GRM5-AS1	100873989	ucsc.edu	37	11	88241597	88241597	+	RNA	SNP	C	C	G	rs566277	byfrequency	TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	.	.	.	.	.	.	.	20	9	13	2	C|0.263;G|0.737	.
HECTD2	143279	hgsc.bcm.edu	37	10	93170250	93170250	+	Missense_Mutation	SNP	C	C	G	rs7081569	byfrequency	TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	HECTD2	NM_182765	exon1	c.C55G	p.P19A	.	.	5	5	0	0	C|0.154;G|0.846	658
HLA-DQA2	3118	bcgsc.ca	37	6	32709265	32709265	+	Silent	SNP	T	T	C	rs200986700		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	HLA-DQA2	NM_020056	exon1	c.T45C	p.T15T	.	.	154	11	99	4	T|0.998;C|0.002	90
ILKAP	80895	broad.mit.edu	37	2	239093901	239093901	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	ILKAP	NM_030768	exon6	c.T453G	p.F151L	.	.	232	4	228	2	.	118
ISM1	140862	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	13279761	13279761	+	Silent	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	ISM1	NM_080826	exon6	c.C1050T	p.D350D	.	.	64	6	64	0	.	68
KIAA1614	57710	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	180907742	180907742	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	KIAA1614	NM_020950	exon6	c.C2813T	p.T938M	.	.	161	29	97	0	.	26
KIF26B	55083	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	1	245530501	245530501	+	Silent	SNP	G	G	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	KIF26B	NM_018012	exon3	c.G831A	p.A277A	.	.	260	23	152	0	.	25
KIF7	374654	hgsc.bcm.edu	37	15	90191827	90191827	+	Missense_Mutation	SNP	T	T	C	rs8037349		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	KIF7	NM_198525	exon5	c.A1102G	p.T368A	.	.	5	5	0	0	T|0.158;C|0.842	523
KLF14	136259	hgsc.bcm.edu	37	7	130418720	130418720	+	Missense_Mutation	SNP	A	A	C	rs111359117		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	KLF14	NM_138693	exon1	c.T141G	p.H47Q	.	.	4	4	0	0	.	90
KRT19	3880	broad.mit.edu;mdanderson.org	37	17	39684492	39684492	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	KRT19	NM_002276	exon1	c.C8T	p.S3F	.	.	35	10	23	0	.	90
KRTAP4-11	653240	ucsc.edu	37	17	39274364	39274364	+	Missense_Mutation	SNP	T	T	G	rs425784		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	.	NM_033059	exon1	c.A204C	p.R68S	.	.	77	22	61	8	.	.
KRTAP5-10	387273	mdanderson.org	37	11	71276681	71276681	+	Silent	SNP	T	T	C	rs113879786	bycluster;byfrequency;by1000genomes	TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	KRTAP5-10	NM_001012710	exon1	c.T48C	p.G16G	.	.	121	34	81	3	T|0.717;C|0.283	91
LRRC52	440699	broad.mit.edu	37	1	165532817	165532817	+	Missense_Mutation	SNP	G	G	A	rs202095448		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	LRRC52	NM_001005214	exon2	c.G698A	p.R233Q	.	.	76	4	56	0	G|0.999;A|0.000	91
LRRTM3	347731	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	10	68686790	68686790	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	LRRTM3	NM_178011	exon2	c.G116T	p.R39M	.	.	97	8	92	0	.	93
MCOLN2	255231	bcgsc.ca	37	1	85397222	85397222	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	MCOLN2	NM_153259	exon12	c.T1365G	p.C455W	.	.	357	139	256	4	.	94
MEF2C	4208	broad.mit.edu	37	5	88027559	88027559	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	MEF2C	NM_001193347	exon9	c.C851T	p.T284M	.	.	65	3	61	0	.	704
MKI67	4288	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	129913861	129913861	+	Missense_Mutation	SNP	C	C	T	rs201650569		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	MKI67	NM_002417	exon7	c.G811A	p.A271T	.	.	81	18	46	0	.	519
MLLT3	4300	broad.mit.edu	37	9	20414280	20414280	+	Silent	SNP	G	G	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	MLLT3	NM_004529	exon5	c.C564T	p.S188S	.	.	122	6	126	1	.	660
MLLT3	4300	broad.mit.edu	37	9	20414373	20414373	+	Silent	SNP	G	G	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	MLLT3	NM_004529	exon5	c.C471T	p.S157S	.	.	29	4	27	0	.	660
MUC2	4583	hgsc.bcm.edu	37	11	1083119	1083119	+	Silent	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	MUC2	NM_002457	exon16	c.C2019T	p.T673T	.	.	15	8	7	0	.	90
MUC4	4585	broad.mit.edu	37	3	195505855	195505855	+	Missense_Mutation	SNP	G	G	T	rs201422998		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	MUC4	NM_018406	exon2	c.C12596A	p.S4199Y	.	.	87	4	56	1	.	90
MUC4	4585	broad.mit.edu	37	3	195508903	195508903	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	MUC4	NM_018406	exon2	c.C9548T	p.T3183M	.	.	55	4	43	1	.	90
MUC4	4585	broad.mit.edu	37	3	195511238	195511238	+	Missense_Mutation	SNP	C	C	T	rs3103956		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	MUC4	NM_018406	exon2	c.G7213A	p.D2405N	.	.	184	14	160	2	.	90
MUC4	4585	hgsc.bcm.edu	37	3	195512654	195512654	+	Missense_Mutation	SNP	C	C	G	rs75106502		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	MUC4	NM_018406	exon2	c.G5797C	p.D1933H	.	.	144	10	104	0	C|0.500;G|0.500	90
MUC4	4585	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	195487851	195487851	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	MUC4	NM_018406	exon16	c.T14752A	p.S4918T	.	.	131	15	82	0	.	90
NFKBIL1	4795	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	31515977	31515977	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	NFKBIL1	NM_005007	exon2	c.G95A	p.R32H	.	.	61	7	58	0	.	90
OR10A6	390093	broad.mit.edu;ucsc.edu	37	11	7949333	7949333	+	Nonsense_Mutation	SNP	G	G	A	rs147185885	byfrequency	TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	OR10A6	NM_001004461	exon1	c.C877T	p.R293X	.	.	119	12	142	0	G|1.000;A|0.000	70
OR2T6	254879	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	248551768	248551768	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	OR2T6	NM_001005471	exon1	c.C859T	p.P287S	.	.	152	34	101	0	.	71
OR51I1	390063	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	5461996	5461996	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	OR51I1	NM_001005288	exon1	c.T749C	p.V250A	.	.	93	29	85	1	.	69
OTUD4	54726	broad.mit.edu	37	4	146071833	146071833	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	OTUD4	NM_001102653	exon13	c.C896A	p.P299Q	.	.	84	18	82	8	.	565
PABPC3	5042	broad.mit.edu	37	13	25671806	25671806	+	Silent	SNP	T	T	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	PABPC3	NM_030979	exon1	c.T1470A	p.A490A	.	.	55	3	41	0	.	72
PCDHB2	56133	broad.mit.edu	37	5	140476411	140476411	+	Silent	SNP	A	A	C	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	PCDHB2	NM_018936	exon1	c.A2037C	p.A679A	.	.	58	3	61	2	.	96
PCMTD1	115294	bcgsc.ca	37	8	52733164	52733164	+	Missense_Mutation	SNP	G	G	C	rs149898988	byfrequency	TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	PCMTD1	NM_052937	exon6	c.C821G	p.P274R	.	.	271	18	234	3	G|0.991;C|0.009	68
PFAS	5198	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	8170947	8170947	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	PFAS	NM_012393	exon26	c.G3346A	p.G1116S	.	.	77	9	54	0	.	94
PKD1L2	114780	bcgsc.ca	37	16	81167282	81167282	+	RNA	SNP	G	G	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	PKD1L2	.	.	.	.	.	.	75	6	88	0	.	92
PLEKHG2	64857	broad.mit.edu	37	19	39914042	39914042	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	PLEKHG2	NM_022835	exon18	c.G2348T	p.G783V	.	.	109	7	86	0	.	274
PLEKHM2	23207	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	16059140	16059140	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	PLEKHM2	NM_015164	exon19	c.C2839T	p.P947S	.	.	28	10	28	0	.	23
PLXDC2	84898	broad.mit.edu;ucsc.edu;mdanderson.org	37	10	20432307	20432307	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	PLXDC2	NM_032812	exon5	c.A625C	p.S209R	.	.	112	15	79	1	.	93
POTEC	388468	broad.mit.edu	37	18	14513675	14513675	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	POTEC	NM_001137671	exon10	c.A1519G	p.K507E	.	.	753	9	565	1	.	3
PYHIN1	149628	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	1	158908870	158908870	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	PYHIN1	NM_152501	exon4	c.A412C	p.K138Q	.	.	176	17	105	0	.	94
RBMX	27316	ucsc.edu	37	X	135961560	135961560	+	Missense_Mutation	SNP	C	C	G	rs80321628		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	RBMX	NM_001164803	exon2	c.G27C	p.K9N	.	.	133	22	136	13	.	131
RCC2	55920	broad.mit.edu;bcgsc.ca	37	1	17752173	17752173	+	Silent	SNP	G	G	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	RCC2	NM_001136204	exon3	c.C387T	p.Y129Y	.	.	139	42	131	2	.	90
RPS6KA2	6196	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	166912106	166912106	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	RPS6KA2	NM_001006932	exon9	c.G661A	p.D221N	.	.	62	6	51	0	.	1405
RYR1	6261	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	19	38993172	38993172	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	RYR1	NM_001042723	exon48	c.C7640T	p.A2547V	.	.	37	5	29	0	.	100
SAC3D1	29901	hgsc.bcm.edu	37	11	64809090	64809090	+	Missense_Mutation	SNP	T	T	G	rs12271134		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	SAC3D1	NM_013299	exon1	c.T326G	p.L109R	.	.	5	5	0	0	T|0.005;G|0.995	90
SCN10A	6336	broad.mit.edu;ucsc.edu	37	3	38791656	38791656	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	SCN10A	NM_006514	exon12	c.A1775G	p.K592R	.	.	64	11	66	1	.	99
SCUBE3	222663	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	35210863	35210863	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	SCUBE3	NM_152753	exon15	c.C1759A	p.L587I	.	.	100	28	79	1	.	91
SFSWAP	6433	broad.mit.edu	37	12	132250701	132250701	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	SFSWAP	NM_001261411	exon13	c.C1990T	p.R664W	.	.	52	4	54	0	.	91
SH3PXD2A	9644	broad.mit.edu;mdanderson.org	37	10	105362841	105362841	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	SH3PXD2A	NM_014631	exon14	c.T2050A	p.S684T	.	.	27	5	30	0	.	226
SIGLEC8	27181	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	51961351	51961351	+	Silent	SNP	T	T	C	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	SIGLEC8	NM_014442	exon1	c.A291G	p.Q97Q	.	.	147	24	168	0	.	94
SLC15A2	6565	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	121630500	121630500	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	SLC15A2	NM_021082	exon4	c.C415A	p.Q139K	.	.	86	18	72	0	.	91
SLC35G5	83650	ucsc.edu	37	8	11188922	11188922	+	Missense_Mutation	SNP	T	T	C	rs76944947	byfrequency	TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	.	NM_054028	exon1	c.T307C	p.W103R	.	.	63	7	59	0	T|0.975;C|0.025	.
SLC6A19	340024	broad.mit.edu;bcgsc.ca	37	5	1219158	1219158	+	Silent	SNP	C	C	T	rs141604151		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	SLC6A19	NM_001003841	exon9	c.C1314T	p.G438G	.	.	99	10	54	0	C|1.000;T|0.000	90
SLC9C2	284525	broad.mit.edu	37	1	173551127	173551127	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	.	NM_178527	exon7	c.C661A	p.L221I	.	.	420	7	351	1	.	.
SLCO2B1	11309	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	74880711	74880711	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	SLCO2B1	NM_007256	exon6	c.G683A	p.G228E	.	.	79	8	47	0	.	154
SMCO2	0	broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	27623645	27623645	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	.	NM_001145010	exon2	c.G81T	p.K27N	.	.	38	4	44	0	.	.
SPATA17	128153	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	1	217955552	217955552	+	Missense_Mutation	SNP	C	C	T	rs145142638	byfrequency	TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	SPATA17	NM_138796	exon8	c.C760T	p.R254C	.	.	290	17	221	0	C|0.999;T|0.001	69
STON1	11037	broad.mit.edu	37	2	48808301	48808301	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	STON1	NM_001198595	exon3	c.C529T	p.R177X	.	.	37	4	35	1	.	91
TADA2A	6871	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	35804825	35804825	+	Silent	SNP	T	T	C	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	TADA2A	NM_001488	exon8	c.T559C	p.L187L	.	.	163	21	139	0	.	230
TENM2	57451	broad.mit.edu;mdanderson.org	37	5	167675304	167675304	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	.	NM_001122679	exon27	c.C7333T	p.P2445S	.	.	91	9	83	1	.	.
TJP1	7082	ucsc.edu	37	15	30010304	30010304	+	Nonsense_Mutation	SNP	T	T	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	TJP1	NM_003257	exon22	c.A3895T	p.K1299X	.	.	134	32	103	2	.	95
TJP1	7082	ucsc.edu;bcgsc.ca	37	15	30010303	30010303	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	TJP1	NM_003257	exon22	c.A3896G	p.K1299R	.	.	134	30	105	1	.	95
TMC6	11322	broad.mit.edu;bcgsc.ca	37	17	76120700	76120700	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	TMC6	NM_001127198	exon8	c.C796G	p.L266V	.	.	91	6	60	1	.	90
TMEM200A	114801	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	6	130761733	130761733	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	TMEM200A	NM_001258277	exon3	c.C166T	p.R56W	.	.	142	12	108	0	.	23
TRIM67	440730	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	231349708	231349708	+	Silent	SNP	C	C	G	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	TRIM67	NM_001004342	exon9	c.C2271G	p.L757L	.	.	171	23	133	0	.	229
TRPM3	80036	broad.mit.edu;ucsc.edu;bcgsc.ca	37	9	73477842	73477842	+	Silent	SNP	G	G	A	rs145250735	byfrequency;alternate_allele	TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	TRPM3	NM_001007471	exon3	c.C444T	p.G148G	.	.	191	25	174	1	G|0.999;T|0.001	521
TTBK2	146057	broad.mit.edu;ucsc.edu;mdanderson.org	37	15	43164898	43164898	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	TTBK2	NM_173500	exon3	c.C128T	p.T43I	.	.	89	15	71	1	.	338
TUBA1C	84790	ucsc.edu	37	12	49666152	49666152	+	Silent	SNP	G	G	A	rs199599214	byfrequency	TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	TUBA1C	NM_032704	exon4	c.G492A	p.K164K	.	.	295	23	232	16	G|0.998;A|0.002	90
TUBB1	81027	broad.mit.edu	37	20	57599261	57599261	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	TUBB1	NM_030773	exon4	c.T779C	p.F260S	.	.	76	8	45	2	.	227
TUBB4A	10382	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	6495427	6495427	+	Silent	SNP	C	C	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	.	NM_006087	exon4	c.G1083A	p.L361L	.	.	48	10	41	0	.	.
VPS13B	157680	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	8	100711796	100711796	+	Silent	SNP	G	G	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	VPS13B	NM_017890	exon36	c.G6165T	p.L2055L	.	.	133	6	77	0	.	301
XRN1	54464	broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	142103424	142103424	+	Missense_Mutation	SNP	G	G	A	rs141258147		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	XRN1	NM_001042604	exon21	c.C2443T	p.R815C	.	.	72	11	100	1	G|1.000;A|0.000	93
YY1	7528	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	14	100705845	100705845	+	Silent	SNP	G	G	T	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	YY1	NM_003403	exon1	c.G264T	p.P88P	.	.	47	7	30	0	.	226
ZNF208	7757	ucsc.edu	37	19	22156870	22156870	+	Silent	SNP	G	G	A	rs200854866		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	ZNF208	NM_007153	exon4	c.C966T	p.F322F	.	.	36	8	41	0	.	7
ZNF384	171017	hgsc.bcm.edu	37	12	6777072	6777072	+	Silent	SNP	C	C	T	rs78573212		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	ZNF384	NM_001135734	exon11	c.G1542A	p.Q514Q	.	.	48	7	33	0	.	1083
CHEK2	11200	broad.mit.edu	37	22	29091840	29091841	+	Missense_Mutation	DNP	TG	TG	CA	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	TG	TG	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	.	.	.	.	p.K416E	.	.	.	.	.	.	.	
UNC93A	54346	ucsc.edu	37	6	167728900	167728901	+	Missense_Mutation	DNP	TC	TC	CG	novel		TCGA-ED-A66X-01A-11D-A30V-10	TCGA-ED-A66X-10A-01D-A30V-10	TC	TC	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	eb66e2cc-2bbc-465c-8778-a7920ea2c3bc	7b7ee2a3-d880-4f02-a19a-1c79c4b15239	.	.	.	.	.	p.V445A	.	.	.	.	.	.	.	
