Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	TranscriptID	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov_SOL	TVarCov_SOL	NTotCov_SOL	NVarCov_SOL	dbSNPPopFreq	COSMIC_Gene_Freq
ADIPOR2	79602	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	1893123	1893123	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	ADIPOR2	NM_024551	exon7	c.G916A	p.A306T	.	.	110	67	147	0	.	90
ADRM1	11047	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	60882773	60882773	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	ADRM1	NM_175573	exon7	c.G745C	p.G249R	.	.	69	27	51	0	.	90
ANKRD32	84250	broad.mit.edu;bcgsc.ca;mdanderson.org	37	5	94022380	94022380	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	ANKRD32	NM_032290	exon16	c.G2078T	p.S693I	.	.	166	13	162	1	.	92
ARHGAP22	58504	broad.mit.edu	37	10	49658744	49658744	+	Silent	SNP	C	C	T	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	ARHGAP22	NM_001256024	exon9	c.G1476A	p.S492S	.	.	32	3	67	0	.	228
ARRDC2	27106	bcgsc.ca	37	19	18120426	18120426	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	ARRDC2	NM_015683	exon4	c.A515G	p.K172R	.	.	56	4	63	0	.	91
ATF7	11016	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	12	53928285	53928285	+	Splice_Site	SNP	C	C	G	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	ATF7	NM_006856	exon7	c.560+1G>C	.	.	.	111	6	106	0	.	455
C2orf16	84226	broad.mit.edu	37	2	27804714	27804714	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	C2orf16	NM_032266	exon1	c.T5275C	p.C1759R	.	.	49	8	71	2	.	67
CD81	975	hgsc.bcm.edu;bcgsc.ca	37	11	2416714	2416715	+	Frame_Shift_Ins	INS	-	-	AA	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	CD81	NM_004356	exon5	c.423_424insAA	p.N141fs	.	.	57	30	82	0	.	650
CDC27	996	bcgsc.ca	37	17	45234625	45234625	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	CDC27	NM_001114091	exon6	c.G601T	p.V201F	.	.	179	21	202	8	.	291
DCAF13P3	100132724	ucsc.edu	37	15	51238306	51238306	+	RNA	SNP	G	G	T	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	.	.	.	.	.	.	.	13	5	22	0	.	.
DOCK5	80005	bcgsc.ca	37	8	25174532	25174532	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	DOCK5	NM_024940	exon14	c.G1328T	p.R443L	.	.	52	4	57	0	.	71
DYTN	391475	broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	207528078	207528078	+	Silent	SNP	T	T	C	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	DYTN	NM_001093730	exon11	c.A1182G	p.Q394Q	.	.	128	75	185	2	.	23
EIF3H	8667	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	117668129	117668129	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	EIF3H	NM_003756	exon5	c.G673T	p.A225S	.	.	304	110	329	2	.	658
ENPP5	59084	broad.mit.edu	37	6	46129492	46129492	+	Splice_Site	SNP	T	T	C	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	ENPP5	NM_021572	exon5	c.1007-2A>G	.	.	.	16	3	22	0	.	90
ERCC3	2071	ucsc.edu;bcgsc.ca	37	2	128044460	128044460	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	ERCC3	NM_000122	exon8	c.C1161A	p.S387R	.	.	46	4	67	0	.	723
FAM65B	9750	broad.mit.edu;bcgsc.ca	37	6	24869375	24869375	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	FAM65B	NM_015864	exon6	c.C361A	p.Q121K	.	.	257	9	283	0	.	91
FAT2	2196	ucsc.edu	37	5	150905442	150905442	+	Silent	SNP	G	G	T	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	FAT2	NM_001447	exon17	c.C10393A	p.R3465R	.	.	34	5	59	0	.	96
FGF13	2258	broad.mit.edu	37	X	137793117	137793117	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	FGF13	NM_004114	exon1	c.C49A	p.R17S	.	.	88	3	212	0	.	626
FOXP2	93986	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	114269944	114269944	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	FOXP2	NM_001172767	exon5	c.C556A	p.Q186K	.	.	23	5	36	0	.	295
FPR1	2357	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	52249927	52249927	+	Silent	SNP	G	G	T	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	FPR1	NM_001193306	exon3	c.C321A	p.I107I	.	.	102	40	75	0	.	524
HPS4	89781	broad.mit.edu	37	22	26853885	26853885	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	HPS4	NM_022081	exon13	c.C1895A	p.A632D	.	.	35	5	36	1	.	90
IDH2	3418	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	90631838	90631838	+	Missense_Mutation	SNP	C	C	T	rs121913503		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	IDH2,brain,glioma,0	IDH2	NM_002168	exon4	c.G515A	p.R172K	.	.	100	49	151	0	.	15118
ITGB2	3689	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	21	46309959	46309959	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	ITGB2	NM_000211	exon12	c.G1591A	p.G531R	.	.	82	38	99	0	.	717
JPH3	57338	broad.mit.edu	37	16	87678079	87678079	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	JPH3	NM_020655	exon2	c.G598T	p.A200S	.	.	77	5	77	0	.	92
KCNN3	3782	hgsc.bcm.edu	37	1	154842230	154842231	+	In_Frame_Ins	INS	-	-	CTGCTGCTGCTG	rs3831942	alternate_allele	TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	KCNN3	NM_001204087	exon1	c.211_212insCAGCAGCAGCAG	p.Q71delinsQQQQQ	.	.	66	19	78	0	.	91
KRTAP4-9	100132386	broad.mit.edu	37	17	39262247	39262247	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	.	NM_001146041	exon1	c.T607G	p.L203V	.	.	68	4	102	1	.	.
MED29	55588	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	19	39883132	39883133	+	Frame_Shift_Ins	INS	-	-	GATTCAGAAC	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	MED29	NM_017592	exon2	c.308_309insGATTCAGAAC	p.L103fs	.	.	50	8	85	0	.	70
METTL17	64745	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	21464877	21464877	+	Silent	SNP	G	G	T	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	METTL17	NM_001029991	exon13	c.G1272T	p.G424G	.	.	48	13	65	0	.	94
MMRN2	79812	mdanderson.org	37	10	88702617	88702617	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	MMRN2	NM_024756	exon6	c.C1924T	p.Q642X	.	.	15	3	17	0	.	153
MORN5	254956	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	124936889	124936889	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	MORN5	NM_198469	exon4	c.G422A	p.R141H	.	.	70	15	76	0	.	90
MRPL10	124995	mdanderson.org	37	17	45905893	45905893	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	MRPL10	NM_148887	exon3	c.C226T	p.P76S	.	.	19	3	39	0	.	91
ND4	0	broad.mit.edu;bcgsc.ca	37	MT	10927	10927	+	Silent	SNP	T	T	C	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	.	ENST00000361381	exon1	c.T168C	p.F56F	.	.	23	23	12	0	.	.
NDUFAF3	25915	bcgsc.ca	37	3	49059972	49059972	+	Splice_Site	SNP	G	G	A	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	NDUFAF3	NM_199074	exon2	c.99+1G>A	.	.	.	50	4	67	0	.	90
OR10G7	390265	broad.mit.edu;mdanderson.org	37	11	123909545	123909545	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	OR10G7	NM_001004463	exon1	c.C164T	p.T55I	.	.	350	103	353	1	.	70
PAPPA	5069	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	119109470	119109470	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	PAPPA	NM_002581	exon15	c.C3946T	p.H1316Y	.	.	130	53	113	0	.	77
PBDC1	51260	broad.mit.edu	37	X	75397692	75397692	+	Silent	SNP	A	A	G	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	.	NM_016500	exon6	c.A651G	p.K217K	.	.	99	4	208	1	.	.
PCDH11X	27328	broad.mit.edu	37	X	91132344	91132344	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	PCDH11X	NM_001168363	exon2	c.G1105T	p.V369F	.	.	95	13	181	0	.	193
PCDH12	51294	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	5	141336991	141336991	+	Silent	SNP	C	C	A	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	PCDH12	NM_016580	exon1	c.G426T	p.L142L	.	.	86	46	128	0	.	93
PLXNB2	23654	broad.mit.edu	37	22	50727197	50727197	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	PLXNB2	NM_012401	exon5	c.G1355T	p.S452I	.	.	60	5	103	3	.	211
PMM1	5372	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	22	41980580	41980580	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	PMM1	NM_002676	exon3	c.C233T	p.A78V	.	.	35	4	58	0	.	91
POLD1	5424	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	50917028	50917028	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	POLD1	NM_002691	exon19	c.G2280T	p.M760I	.	.	56	7	51	0	.	840
PRR12	57479	broad.mit.edu	37	19	50098498	50098498	+	Silent	SNP	A	A	C	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	PRR12	NM_020719	exon4	c.A906C	p.P302P	.	.	40	19	38	5	.	70
PRSS38	339501	bcgsc.ca;mdanderson.org	37	1	228033184	228033184	+	Silent	SNP	C	C	T	rs139316256	byfrequency	TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	PRSS38	NM_183062	exon4	c.C597T	p.D199D	.	.	23	7	25	0	C|0.997;T|0.003	92
PTPRN2	5799	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	157931034	157931034	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	PTPRN2	NM_130843	exon7	c.G1084A	p.E362K	.	.	59	25	67	0	.	295
RCN3	57333	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	50031779	50031779	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	RCN3	NM_020650	exon2	c.G50A	p.G17E	.	.	78	28	84	0	.	91
SART1	9092	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	65743929	65743929	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	SART1	NM_005146	exon13	c.G1636A	p.E546K	.	.	23	13	35	0	.	227
SLC8A2	6543	bcgsc.ca	37	19	47960788	47960788	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	SLC8A2	NM_015063	exon3	c.G739A	p.D247N	.	.	46	4	60	0	.	94
SLITRK5	26050	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	88329198	88329198	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	SLITRK5	NM_015567	exon2	c.G1555A	p.A519T	.	.	48	33	89	0	.	94
SPAG5	10615	broad.mit.edu;bcgsc.ca;mdanderson.org	37	17	26906776	26906776	+	Silent	SNP	C	C	T	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	SPAG5	NM_006461	exon17	c.G2877A	p.Q959Q	.	.	47	18	57	1	.	90
SPPL2A	84888	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	51039809	51039809	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	SPPL2A	NM_032802	exon5	c.T467G	p.I156S	.	.	162	94	207	0	.	90
SPTBN1	6711	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	54857137	54857137	+	Silent	SNP	C	C	T	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	SPTBN1	NM_003128	exon15	c.C2778T	p.I926I	.	.	25	15	25	0	.	140
SSC5D	284297	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	56011599	56011599	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	.	NM_001195267	exon10	c.C2122T	p.R708W	.	.	36	10	36	0	.	.
STXBP5L	9515	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	120941851	120941851	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	STXBP5L	NM_014980	exon11	c.G958A	p.E320K	.	.	131	53	141	0	.	77
TBC1D26	353149	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	15644532	15644532	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	TBC1D26	NM_178571	exon10	c.G643A	p.A215T	.	.	22	14	37	0	.	90
TCHH	7062	broad.mit.edu	37	1	152082286	152082286	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	TCHH	NM_007113	exon3	c.T3407G	p.L1136R	.	.	184	9	201	1	.	72
TFIP11	24144	broad.mit.edu	37	22	26902762	26902762	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	TFIP11	NM_001008697	exon6	c.T342G	p.F114L	.	.	124	4	137	0	.	90
TNN	63923	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	1	175048581	175048581	+	Silent	SNP	G	G	A	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	TNN	NM_022093	exon3	c.G522A	p.A174A	.	.	44	18	38	0	.	138
USP34	9736	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	61447525	61447525	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	USP34	NM_014709	exon67	c.C7967T	p.A2656V	.	.	106	41	126	1	.	579
XYLT1	64131	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	17353089	17353089	+	Silent	SNP	G	G	A	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	XYLT1	NM_022166	exon3	c.C669T	p.A223A	.	.	153	69	148	0	.	94
ZBBX	79740	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	166960379	166960379	+	Silent	SNP	G	G	A	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	ZBBX	NM_001199201	exon21	c.C2307T	p.S769S	.	.	76	32	86	0	.	92
ZNF311	282890	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	28963999	28963999	+	Silent	SNP	T	T	G	novel		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	ZNF311	NM_001010877	exon7	c.A780C	p.S260S	.	.	158	48	129	0	.	22
ZNF527	84503	ucsc.edu	37	19	37870148	37870148	+	Nonsense_Mutation	SNP	G	G	T	rs77967238		TCGA-ED-A82E-01A-11D-A34Z-10	TCGA-ED-A82E-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	64aa69e5-4ab1-45b5-aca6-c2584ac511a3	6a4d2501-89d2-42d5-9182-f5eb7a368506	.	ZNF527	NM_032453	exon3	c.G160T	p.G54X	.	.	92	25	86	21	.	70
