Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	TranscriptID	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov_SOL	TVarCov_SOL	NTotCov_SOL	NVarCov_SOL	dbSNPPopFreq	COSMIC_Gene_Freq
ACOX1	51	broad.mit.edu	37	17	73947567	73947567	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	ACOX1	NM_007292	exon8	c.G1036A	p.A346T	.	.	188	5	115	0	.	91
ADRB2	154	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	148207094	148207094	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	ADRB2	NM_000024	exon1	c.G700C	p.D234H	.	.	106	40	80	0	.	523
AMOT	154796	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	112022293	112022293	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	AMOT	NM_001113490	exon10	c.G3089C	p.S1030T	.	.	252	43	259	0	.	131
ANKRD30A	91074	broad.mit.edu	37	10	37508384	37508384	+	Silent	SNP	G	G	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	ANKRD30A	NM_052997	exon34	c.G3576A	p.V1192V	.	.	182	6	125	1	.	161
ANP32C	23520	ucsc.edu;mdanderson.org	37	4	165118830	165118830	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	ANP32C	NM_012403	exon1	c.C34T	p.R12W	.	.	113	37	99	2	.	90
ARHGEF3	50650	broad.mit.edu;ucsc.edu	37	3	56835759	56835759	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	ARHGEF3	NM_019555	exon1	c.C68G	p.P23R	.	.	81	12	89	1	.	228
ARL5A	26225	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	152670806	152670806	+	Silent	SNP	T	T	C	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	ARL5A	NM_012097	exon3	c.A132G	p.T44T	.	.	196	48	195	0	.	227
ARR3	407	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	69501565	69501565	+	Silent	SNP	C	C	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	ARR3	NM_004312	exon17	c.C1116T	p.G372G	.	.	100	25	89	0	.	156
ATP6V0E2	155066	broad.mit.edu	37	7	149576715	149576715	+	Silent	SNP	G	G	C	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	.	NM_001100592	exon3	c.G591C	p.V197V	.	.	36	3	17	0	.	.
ATP8A1	10396	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	42553255	42553255	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	ATP8A1	NM_006095	exon18	c.T1562C	p.V521A	.	.	152	41	147	0	.	92
BHLHB9	80823	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	102004068	102004068	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	BHLHB9	NM_001142530	exon2	c.G145A	p.G49R	.	.	376	108	368	0	.	132
BMP1	649	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	22052004	22052004	+	Silent	SNP	G	G	A	rs199778498		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	BMP1	NM_001199	exon11	c.G1344A	p.S448S	.	.	120	51	131	0	G|0.999;A|0.000	155
BPNT1	10380	ucsc.edu	37	1	220231276	220231276	+	RNA	SNP	T	T	C	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	BPNT1	.	.	.	.	.	.	92	1	49	0	.	91
BRIX1	55299	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	34925045	34925045	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	BRIX1	NM_018321	exon9	c.T757G	p.L253V	.	.	33	7	24	0	.	90
C2orf71	388939	ucsc.edu;bcgsc.ca;mdanderson.org	37	2	29294239	29294239	+	Silent	SNP	G	G	A	rs144569618	byfrequency	TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	C2orf71	NM_001029883	exon1	c.C2889T	p.S963S	.	.	67	14	66	1	G|0.974;A|0.026	91
C6orf170	221322	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	121625734	121625734	+	Silent	SNP	A	A	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	C6orf170	NM_152730	exon7	c.T807C	p.N269N	.	.	60	10	76	0	.	92
C7	730	broad.mit.edu	37	5	40945320	40945320	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	C7	NM_000587	exon7	c.T588A	p.F196L	.	.	149	5	92	0	.	22
CACNG2	10369	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	22	36960731	36960731	+	Silent	SNP	G	G	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	CACNG2	NM_006078	exon4	c.C639T	p.R213R	.	.	22	10	20	0	.	90
CAPN13	92291	broad.mit.edu	37	2	30966259	30966259	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	CAPN13	NM_144575	exon13	c.G1435T	p.D479Y	.	.	125	4	98	0	.	136
CAPZB	832	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	1	19746233	19746233	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	CAPZB	NM_004930	exon2	c.G15C	p.Q5H	.	.	95	5	90	0	.	90
CCDC164	92749	broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	26676331	26676331	+	Silent	SNP	G	G	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	CCDC164	NM_145038	exon14	c.G1833A	p.E611E	.	.	109	25	100	2	.	92
CDK5RAP2	55755	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	123298712	123298712	+	Silent	SNP	T	T	C	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	CDK5RAP2	NM_018249	exon7	c.A600G	p.S200S	.	.	82	29	72	0	.	229
CEP85L	387119	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	118832526	118832526	+	Missense_Mutation	SNP	G	G	A	rs138089888	byfrequency	TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	.	NM_001178035	exon6	c.C1201T	p.R401W	.	.	115	30	93	0	G|1.000;A|0.000	.
CHD2	1106	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	93499777	93499777	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	CHD2	NM_001271	exon16	c.T1898C	p.L633P	.	.	46	12	51	0	.	229
CHIC1	53344	hgsc.bcm.edu;broad.mit.edu	37	X	72783227	72783227	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	CHIC1	NM_001039840	exon1	c.C107A	p.S36X	.	.	136	9	107	0	.	130
CLASP1	23332	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	122216520	122216520	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	CLASP1	NM_001207051	exon13	c.G1210A	p.D404N	.	.	103	22	61	0	.	91
CNTNAP4	85445	broad.mit.edu	37	16	76572221	76572221	+	Silent	SNP	G	G	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	CNTNAP4	NM_138994	exon18	c.G2985A	p.V995V	.	.	129	4	103	1	.	70
COL15A1	1306	bcgsc.ca;mdanderson.org	37	9	101748344	101748344	+	Missense_Mutation	SNP	G	G	A	rs61999303	byfrequency	TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	COL15A1	NM_001855	exon3	c.G598A	p.A200T	.	.	77	17	51	0	G|0.988;A|0.012	96
COL6A3	1293	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	238245049	238245049	+	Silent	SNP	A	A	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	COL6A3	NM_004369	exon40	c.T8694C	p.T2898T	.	.	123	23	86	0	.	526
CTCFL	140690	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	56073609	56073609	+	Silent	SNP	C	C	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	CTCFL	NM_001269041	exon10	c.G1989A	p.K663K	.	.	158	40	111	0	.	292
CUL9	23113	bcgsc.ca	37	6	43181019	43181022	+	Frame_Shift_Del	DEL	TCAA	TCAA	-	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	TCAA	TCAA	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	CUL9	NM_015089	exon27	c.5345_5348del	p.1782_1783del	.	.	118	27	121	1	.	529
CUX1	1523	broad.mit.edu;bcgsc.ca;mdanderson.org	37	7	101877505	101877505	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	CUX1	NM_001202543	exon22	c.C3640T	p.R1214W	.	.	35	8	41	0	.	160
CXorf30	645090	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	X	36319234	36319234	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	CXorf30	NM_001098843	exon8	c.A248T	p.K83M	.	.	284	16	251	0	.	62
CXorf58	254158	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	23953337	23953337	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	CXorf58	NM_152761	exon7	c.C580A	p.P194T	.	.	26	8	37	0	.	130
DCHS1	8642	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	6655134	6655134	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	DCHS1	NM_003737	exon4	c.A2104G	p.T702A	.	.	125	36	107	1	.	73
DECR1	1666	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	91031397	91031397	+	Silent	SNP	T	T	C	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	DECR1	NM_001359	exon4	c.T414C	p.P138P	.	.	106	37	78	0	.	90
DENND4B	9909	bcgsc.ca	37	1	153907324	153907324	+	Silent	SNP	T	T	C	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	DENND4B	NM_014856	exon18	c.A2685G	p.Q895Q	.	.	145	9	88	1	.	69
DMD	1756	hgsc.bcm.edu;broad.mit.edu	37	X	31165436	31165436	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	DMD	NM_004006	exon75	c.C10753T	p.Q3585X	.	.	165	10	154	0	.	265
DNAH2	146754	broad.mit.edu	37	17	7708380	7708380	+	Silent	SNP	A	A	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	DNAH2	NM_020877	exon59	c.A9288G	p.E3096E	.	.	70	4	100	0	.	102
DNAH5	1767	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	13820597	13820597	+	Silent	SNP	A	A	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	DNAH5	NM_001369	exon41	c.T6699C	p.A2233A	.	.	116	26	76	0	.	182
DOK3	79930	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	176931755	176931755	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	DOK3	NM_024872	exon5	c.G802A	p.G268S	.	.	135	28	101	0	.	226
EEF1B2	1933	broad.mit.edu	37	2	207025366	207025366	+	Silent	SNP	G	G	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	EEF1B2	NM_021121	exon3	c.G135A	p.P45P	.	.	158	4	158	1	.	227
EIF3A	8661	broad.mit.edu	37	10	120801773	120801773	+	Silent	SNP	G	G	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	EIF3A	NM_003750	exon19	c.C3259A	p.R1087R	.	.	126	8	112	2	.	226
EPPK1	83481	bcgsc.ca	37	8	144940462	144940462	+	Silent	SNP	G	G	A	rs56146920	bycluster;byfrequency	TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	EPPK1	NM_031308	exon1	c.C6960T	p.S2320S	.	.	89	13	81	1	G|0.500;A|0.500	25
EPPK1	83481	bcgsc.ca	37	8	144940474	144940474	+	Silent	SNP	C	C	T	rs56015972	bycluster	TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	EPPK1	NM_031308	exon1	c.G6948A	p.G2316G	.	.	90	13	75	1	C|0.500;T|0.500	25
EVC2	132884	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	5633629	5633629	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	EVC2	NM_147127	exon11	c.G1601A	p.R534K	.	.	73	12	71	0	.	155
FADD	8772	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	11	70049591	70049591	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	FADD	NM_003824	exon1	c.A26G	p.H9R	.	.	56	10	53	0	.	660
FAT2	2196	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	150948274	150948274	+	Silent	SNP	G	G	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	FAT2	NM_001447	exon1	c.C219A	p.I73I	.	.	212	45	159	1	.	96
FBN2	2201	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	5	127686699	127686699	+	Splice_Site	SNP	T	T	C	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	FBN2	NM_001999	exon22	c.2675-2A>G	.	.	.	94	6	51	0	.	146
FHAD1	114827	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	15675645	15675645	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	FHAD1	NM_052929	exon18	c.G2388C	p.E796D	.	.	56	14	65	0	.	69
FIZ1	84922	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	56104976	56104976	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	FIZ1	NM_032836	exon3	c.G331A	p.V111I	.	.	127	27	108	0	.	90
FLNA	2316	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	153586830	153586830	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	FLNA	NM_001456	exon27	c.T4581A	p.D1527E	.	.	164	29	154	0	.	599
FSIP1	161835	broad.mit.edu	37	15	39910185	39910185	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	FSIP1	NM_152597	exon11	c.C1450A	p.L484I	.	.	181	5	175	0	.	517
FUK	197258	hgsc.bcm.edu	37	16	70508239	70508239	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	FUK	NM_145059	exon16	c.G1985T	p.S662I	.	.	94	4	85	0	.	91
GAS2L3	283431	broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	101017478	101017478	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	GAS2L3	NM_174942	exon10	c.G895T	p.V299F	.	.	67	14	77	1	.	227
GIN1	54826	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	5	102433403	102433403	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	GIN1	NM_017676	exon5	c.G722A	p.S241N	.	.	127	7	91	0	.	92
GLI3	2737	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	42262748	42262748	+	Silent	SNP	G	G	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	GLI3	NM_000168	exon2	c.C105T	p.A35A	.	.	81	23	96	0	.	1149
GOLT1B	51026	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	21665265	21665265	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	GOLT1B	NM_016072	exon4	c.A333T	p.R111S	.	.	89	34	54	1	.	90
GON4L	54856	bcgsc.ca	37	1	155722050	155722050	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	GON4L	NM_001037533	exon30	c.G6171T	p.K2057N	.	.	902	236	545	1	.	93
GPATCH4	54865	hgsc.bcm.edu	37	1	156565049	156565049	+	Missense_Mutation	SNP	A	A	C	rs77528517	byfrequency	TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	GPATCH4	NM_015590	exon8	c.T1084G	p.F362V	.	.	666	5	397	0	A|0.333;C|0.333;G|0.333	91
GPR173	54328	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	53106558	53106558	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	GPR173	NM_018969	exon2	c.G755A	p.G252E	.	.	49	10	40	0	.	130
GPR174	84636	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	78426850	78426850	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	GPR174	NM_032553	exon1	c.C346G	p.R116G	.	.	491	124	445	0	.	130
GPR82	27197	broad.mit.edu;ucsc.edu;bcgsc.ca	37	X	41586979	41586979	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	GPR82	NM_080817	exon3	c.T700A	p.C234S	.	.	193	58	188	2	.	110
GRAMD2	196996	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	72455767	72455767	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	GRAMD2	NM_001012642	exon10	c.C796T	p.P266S	.	.	110	36	71	0	.	90
GRIA1	2890	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	5	153085452	153085460	+	In_Frame_Del	DEL	GTGAGTGTT	GTGAGTGTT	-	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	GTGAGTGTT	GTGAGTGTT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	GRIA1	NM_001258021	exon11	c.1678_1686del	p.560_562del	.	.	379	34	271	0	.	96
GRIP2	80852	broad.mit.edu	37	3	14561690	14561690	+	RNA	SNP	G	G	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	GRIP2	.	.	.	.	.	.	116	4	80	0	.	69
HAGHL	84264	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	777559	777559	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	HAGHL	NM_032304	exon1	c.T50G	p.V17G	.	.	130	27	95	0	.	90
HECTD1	25831	hgsc.bcm.edu	37	14	31570253	31570253	+	Missense_Mutation	SNP	G	G	T	rs11549801	alternate_allele	TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	HECTD1	NM_015382	exon43	c.C7716A	p.S2572R	.	.	87	4	92	0	.	570
INTS1	26173	broad.mit.edu	37	7	1535088	1535088	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	.	NM_001080453	exon13	c.C1813A	p.P605T	.	.	45	3	35	0	.	.
ITGB8	3696	broad.mit.edu	37	7	20431099	20431099	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	ITGB8	NM_002214	exon7	c.G1034A	p.G345E	.	.	136	5	135	0	.	227
ITIH4	3700	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	52863215	52863215	+	Silent	SNP	C	C	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	ITIH4	NM_001166449	exon2	c.G171A	p.V57V	.	.	127	37	105	0	.	46
ITPR1	3708	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	3	4693825	4693829	+	Frame_Shift_Del	DEL	TGTCG	TGTCG	-	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	TGTCG	TGTCG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	ITPR1	NM_001099952	exon11	c.874_878del	p.292_293del	.	.	158	35	118	0	.	710
KCNK16	83795	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	39285579	39285579	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	KCNK16	NM_001135106	exon3	c.C478A	p.R160S	.	.	103	30	66	0	.	229
KIAA0040	9674	hgsc.bcm.edu	37	1	175129933	175129934	+	Frame_Shift_Ins	INS	-	-	C	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	.	NM_001162893	exon5	c.217_218insG	p.K73fs	.	.	87	11	66	0	.	.
KIAA1244	57221	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	138640960	138640960	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	KIAA1244	NM_020340	exon28	c.C4595T	p.A1532V	.	.	182	61	168	0	.	228
KIF13B	23303	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	28950346	28950346	+	Silent	SNP	C	C	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	KIF13B	NM_015254	exon37	c.G4374C	p.V1458V	.	.	63	20	94	2	.	22
KRT4	3851	bcgsc.ca	37	12	53207603	53207603	+	Silent	SNP	A	A	G	rs7135148	bycluster;by2hit2allele	TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	KRT4	NM_002272	exon1	c.T240C	p.F80F	.	.	81	13	43	0	A|1.000;|0.000	96
KRT4	3851	bcgsc.ca	37	12	53207606	53207606	+	Silent	SNP	G	G	A	rs79164931	bycluster;by1000genomes	TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	KRT4	NM_002272	exon1	c.C237T	p.G79G	.	.	79	11	43	1	.	96
KRT79	338785	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	12	53225247	53225247	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	KRT79	NM_175834	exon2	c.G641A	p.G214E	.	.	105	7	96	0	.	72
KRTAP4-9	100132386	broad.mit.edu	37	17	39261693	39261693	+	Missense_Mutation	SNP	A	A	T	rs113059833		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	.	NM_001146041	exon1	c.A53T	p.D18V	.	.	49	6	51	1	T|1.000;|0.000	.
KRTAP5-10	387273	mdanderson.org	37	11	71276681	71276681	+	Silent	SNP	T	T	C	rs113879786	bycluster;byfrequency;by1000genomes	TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	KRTAP5-10	NM_001012710	exon1	c.T48C	p.G16G	.	.	55	25	38	0	T|0.717;C|0.283	91
KRTAP5-7	440050	hgsc.bcm.edu;broad.mit.edu	37	11	71238736	71238762	+	In_Frame_Del	DEL	CTGCTGTTCCTCAGGCTGTGGGTCATC	CTGCTGTTCCTCAGGCTGTGGGTCATC	-	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	CTGCTGTTCCTCAGGCTGTGGGTCATC	CTGCTGTTCCTCAGGCTGTGGGTCATC	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	KRTAP5-7	NM_001012503	exon1	c.390_416del	p.130_139del	.	.	183	23	160	0	.	68
LAMP5	24141	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	9510307	9510307	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	.	NM_012261	exon6	c.A683G	p.D228G	.	.	153	25	105	0	.	.
LBP	3929	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	36983752	36983752	+	Silent	SNP	G	G	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	LBP	NM_004139	exon5	c.G531A	p.L177L	.	.	102	39	92	0	.	91
LEPR	3953	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	1	66102511	66102511	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	LEPR	NM_002303	exon20	c.T3311A	p.F1104Y	.	.	135	7	157	0	.	91
LILRB1	10859	bcgsc.ca	37	19	55144141	55144141	+	Silent	SNP	A	A	G	rs10425827	byfrequency	TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	LILRB1	NM_001081637	exon6	c.A888G	p.R296R	.	.	167	35	118	10	A|0.901;G|0.099	137
LILRB1	10859	bcgsc.ca	37	19	55144147	55144147	+	Silent	SNP	C	C	T	rs74906426	byfrequency	TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	LILRB1	NM_001081637	exon6	c.C894T	p.Y298Y	.	.	164	39	114	10	C|0.962;T|0.038	137
LILRB1	10859	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	55143640	55143640	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	LILRB1	NM_001081637	exon5	c.C613T	p.P205S	.	.	290	69	280	0	.	137
LOC100873065	0	bcgsc.ca	37	X	22454563	22454563	+	RNA	SNP	T	T	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	.	.	.	.	.	.	.	132	9	151	0	.	.
LOC645752	0	broad.mit.edu	37	15	78211427	78211427	+	RNA	SNP	G	G	T	rs78547308	byfrequency	TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	.	.	.	.	.	.	.	251	65	217	0	G|0.866;T|0.134	.
LOC645752	0	broad.mit.edu	37	15	78213892	78213892	+	RNA	SNP	C	C	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	.	.	.	.	.	.	.	54	9	58	1	.	.
LOC645752	0	broad.mit.edu	37	15	78213910	78213910	+	RNA	SNP	T	T	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	.	.	.	.	.	.	.	64	7	76	1	.	.
MAGEL2	54551	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	23889752	23889752	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	.	NM_019066	exon1	c.G3138T	p.M1046I	.	.	188	39	190	0	.	.
MICA	100507436	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	31378413	31378413	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	.	NM_001177519	exon2	c.C164T	p.P55L	.	.	235	56	217	0	.	.
MIR211	406993	ucsc.edu;mdanderson.org	37	15	31357301	31357301	+	RNA	SNP	C	C	A	rs187960998	by1000genomes;alternate_allele	TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	.	.	.	.	.	.	.	62	23	46	0	C|0.999;T|0.000	.
MIR561	693146	ucsc.edu;mdanderson.org	37	2	189162265	189162265	+	RNA	SNP	C	C	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	.	.	.	.	.	.	.	106	43	79	0	.	.
MIR600HG	81571	ucsc.edu;mdanderson.org	37	9	125876416	125876416	+	RNA	SNP	G	G	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	.	.	.	.	.	.	.	76	19	73	0	.	.
MLL5	55904	broad.mit.edu;mdanderson.org	37	7	104741930	104741930	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	MLL5	NM_018682	exon15	c.G1781A	p.R594K	.	.	12	3	9	0	.	93
MRPS31P5	100887750	broad.mit.edu	37	13	52768353	52768353	+	RNA	SNP	A	A	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	.	.	.	.	.	.	.	15	7	13	0	.	.
MSH6	2956	broad.mit.edu	37	2	48033373	48033373	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	MSH6	NM_000179	exon8	c.C3677A	p.A1226E	.	.	147	6	137	1	.	3014
MYH15	22989	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	3	108147461	108147461	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	MYH15	NM_014981	exon28	c.G3640C	p.E1214Q	.	.	297	12	228	0	.	73
MYOF	26509	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	10	95161196	95161196	+	Nonsense_Mutation	SNP	G	G	A	rs199504349		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	MYOF	NM_133337	exon12	c.C1096T	p.R366X	.	.	98	28	56	0	.	93
NACA	4666	hgsc.bcm.edu	37	12	57115063	57115063	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	NACA	NM_001113203	exon3	c.A251T	p.Q84L	.	.	61	8	48	0	.	254
NAT14	57106	hgsc.bcm.edu	37	19	55998262	55998262	+	Missense_Mutation	SNP	C	C	T	rs77664073	byfrequency	TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	NAT14	NM_020378	exon3	c.C560T	p.A187V	.	.	5	5	2	0	C|0.873;T|0.127	91
NCOA6	23054	hgsc.bcm.edu;broad.mit.edu	37	20	33345744	33345744	+	Silent	SNP	C	C	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	NCOA6	NM_014071	exon7	c.G807A	p.Q269Q	.	.	122	5	121	0	.	292
NETO2	81831	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	47117548	47117548	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	NETO2	NM_018092	exon9	c.G1162C	p.G388R	.	.	57	23	83	0	.	90
NRCAM	4897	broad.mit.edu	37	7	107864178	107864178	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	NRCAM	NM_001037132	exon8	c.C881A	p.A294E	.	.	106	3	85	0	.	156
NTRK1	4914	broad.mit.edu	37	1	156843453	156843453	+	Silent	SNP	G	G	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	NTRK1	NM_001012331	exon8	c.G879T	p.A293A	.	.	134	4	69	0	.	1393
NYAP2	57624	broad.mit.edu	37	2	226273578	226273578	+	Splice_Site	SNP	A	A	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	.	.	.	.	.	.	.	96	15	78	2	.	.
OPRM1	4988	broad.mit.edu;bcgsc.ca	37	6	154360342	154360342	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	OPRM1	NM_001145279	exon2	c.A47T	p.D16V	.	.	142	10	111	1	.	69
OR4K17	390436	hgsc.bcm.edu	37	14	20586348	20586348	+	Silent	SNP	T	T	C	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	OR4K17,arm,malignant_melanoma,+2	OR4K17	NM_001004715	exon1	c.T783C	p.P261P	.	.	150	6	145	0	.	71
OR8K5	219453	broad.mit.edu	37	11	55927344	55927344	+	Silent	SNP	G	G	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	OR8K5	NM_001004058	exon1	c.C450T	p.L150L	.	.	105	3	90	0	.	72
OVOL2	58495	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	20	18005322	18005322	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	OVOL2	NM_021220	exon4	c.C786G	p.H262Q	.	.	293	21	237	0	.	68
PAX4	5078	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	7	127255087	127255087	+	Silent	SNP	T	T	C	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	PAX4	NM_006193	exon2	c.A183G	p.P61P	.	.	86	6	70	0	.	227
PCDH15	65217	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	56129002	56129002	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	PCDH15	NM_001142763	exon6	c.G367C	p.V123L	.	.	76	22	89	0	.	193
PCDHA5	56143	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	5	140203594	140203594	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	PCDHA5	NM_018908	exon1	c.G2234T	p.G745V	.	.	129	16	88	0	.	137
PCDHAC1	56135	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	140307840	140307840	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	PCDHAC1	NM_031882	exon1	c.G1363C	p.A455P	.	.	57	6	34	0	.	28
PEG3	5178	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	57327699	57327699	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	PEG3	NM_001146184	exon9	c.A2111T	p.Q704L	.	.	101	20	100	0	.	164
PFKFB1	5207	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	54989780	54989780	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	PFKFB1	NM_001271804	exon2	c.G133A	p.V45M	.	.	159	50	172	0	.	131
PGGT1B	5229	broad.mit.edu	37	5	114573587	114573587	+	Silent	SNP	C	C	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	PGGT1B	NM_005023	exon4	c.G447A	p.A149A	.	.	180	8	136	1	.	90
PKHD1L1	93035	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	110417294	110417294	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	PKHD1L1	NM_177531	exon16	c.C1604T	p.P535L	.	.	99	24	97	0	.	145
PKHD1L1	93035	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	8	110539189	110539189	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	PKHD1L1	NM_177531	exon77	c.G12661T	p.G4221X	.	.	127	28	123	0	.	145
PLCB1	23236	ucsc.edu;bcgsc.ca	37	20	8678275	8678275	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	PLCB1	NM_015192	exon11	c.A1012C	p.N338H	.	.	335	85	331	3	.	297
PLCE1	51196	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	96084287	96084287	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	PLCE1	NM_016341	exon31	c.C6683A	p.A2228E	.	.	56	24	59	0	.	229
PLEC	5339	hgsc.bcm.edu;ucsc.edu;bcgsc.ca	37	8	144995161	144995161	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	PLEC	NM_201380	exon32	c.G9239A	p.R3080Q	.	.	39	4	49	0	.	141
PPP5C	5536	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	46850460	46850460	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	PPP5C	NM_006247	exon1	c.A107G	p.N36S	.	.	53	9	37	0	.	227
PRDM9	56979	broad.mit.edu;bcgsc.ca;mdanderson.org	37	5	23527194	23527194	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	PRDM9	NM_020227	exon11	c.G1997A	p.C666Y	.	.	190	28	122	0	.	139
PRSS16	10279	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	6	27220730	27220730	+	Splice_Site	SNP	T	T	C	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	PRSS16	NM_005865	exon9	c.1150+2T>C	.	.	.	166	12	133	0	.	94
PSMD13	5719	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	11	251919	251919	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	PSMD13	NM_175932	exon10	c.G1024C	p.V342L	.	.	196	10	124	0	.	515
RANBP10	57610	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	16	67839340	67839340	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	RANBP10	NM_020850	exon2	c.338delG	p.G113fs	.	.	91	33	65	0	.	227
RARB	5915	hgsc.bcm.edu	37	3	25622157	25622157	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	RARB	NM_000965	exon5	c.G730T	p.G244C	.	.	100	4	92	0	.	870
RGS22	26166	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	100994297	100994297	+	Silent	SNP	A	A	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	RGS22	NM_015668	exon22	c.T3228C	p.I1076I	.	.	95	31	83	0	.	140
RGSL1	353299	broad.mit.edu;bcgsc.ca	37	1	182443519	182443519	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	RGSL1	NM_001137669	exon6	c.C1273T	p.R425C	.	.	356	11	221	0	.	226
RIMS2	9699	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	104930679	104930679	+	Silent	SNP	C	C	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	RIMS2	NM_001100117	exon9	c.C2047A	p.R683R	.	.	121	25	121	0	.	279
RMDN1	51115	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	8	87492510	87492511	+	Frame_Shift_Ins	INS	-	-	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	.	NM_016033	exon6	c.637_638insT	p.I213fs	.	.	111	34	112	0	.	.
RNU6-76	100873777	bcgsc.ca	37	16	33489855	33489855	+	RNA	SNP	C	C	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	.	.	.	.	.	.	.	220	40	198	2	.	.
ROBO2	6092	broad.mit.edu	37	3	77614132	77614132	+	Silent	SNP	C	C	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	ROBO2	NM_002942	exon12	c.C1710T	p.T570T	.	.	67	8	84	2	.	328
SATL1	340562	broad.mit.edu	37	X	84363378	84363378	+	Silent	SNP	T	T	C	rs141438383	byfrequency	TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	SATL1	NM_001012980	exon1	c.A597G	p.Q199Q	.	.	497	8	411	0	T|1.000;C|0.000	175
SBNO1	55206	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	123782650	123782650	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	SBNO1	NM_001167856	exon30	c.A3914T	p.Y1305F	.	.	138	42	100	0	.	292
SCG3	29106	hgsc.bcm.edu;ucsc.edu;bcgsc.ca	37	15	51975586	51975586	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	SCG3	NM_013243	exon4	c.G352A	p.D118N	.	.	34	4	25	0	.	91
SCHIP1	29970	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	158991644	158991644	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	SCHIP1	NM_014575	exon1	c.A35T	p.D12V	.	.	121	33	103	1	.	92
SCN5A	6331	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	38645342	38645342	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	SCN5A	NM_001160160	exon12	c.G1751A	p.G584D	.	.	64	13	48	0	.	98
SGOL2	151246	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	2	201399836	201399838	+	In_Frame_Del	DEL	AAG	AAG	-	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	AAG	AAG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	SGOL2	NM_001160046	exon3	c.251_253del	p.84_85del	.	.	81	16	40	0	.	94
SI	6476	broad.mit.edu;bcgsc.ca	37	3	164776979	164776979	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	SI	NM_001041	exon11	c.G1255A	p.G419R	.	.	171	6	144	0	.	104
SLC27A6	28965	broad.mit.edu;bcgsc.ca	37	5	128365345	128365345	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	SLC27A6	NM_001017372	exon9	c.A1628G	p.E543G	.	.	102	5	70	1	.	90
SLC7A13	157724	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	87235302	87235302	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	SLC7A13	NM_138817	exon2	c.C716T	p.P239L	.	.	87	22	63	0	.	90
SLC9A6	10479	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	X	135067806	135067806	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	SLC9A6	NM_006359	exon1	c.G145A	p.E49K	.	.	60	15	69	0	.	131
SLITRK2	84631	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	144903985	144903985	+	Silent	SNP	C	C	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	SLITRK2	NM_001144005	exon5	c.C42A	p.A14A	.	.	199	37	167	0	.	136
SMG1	23049	broad.mit.edu	37	16	18883580	18883580	+	Silent	SNP	T	T	C	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	SMG1	NM_015092	exon15	c.A2109G	p.T703T	.	.	151	5	137	0	.	1160
SPECC1	92521	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	20109082	20109082	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	SPECC1	NM_001033553	exon4	c.A1720G	p.T574A	.	.	66	21	63	0	.	639
SPHKAP	80309	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	228882436	228882436	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	SPHKAP	NM_030623	exon7	c.A3134C	p.K1045T	.	.	98	24	84	0	.	167
SRRM4	84530	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	119563215	119563215	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	SRRM4	NM_194286	exon7	c.G545A	p.R182H	.	.	72	23	70	0	.	2
SSR3	6747	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	156266720	156266720	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	SSR3	NM_007107	exon3	c.G333T	p.K111N	.	.	71	19	60	0	.	90
ST7-OT4	338069	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	116596768	116596768	+	RNA	SNP	A	A	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	.	.	.	.	.	.	.	65	21	60	0	.	.
STAB2	55576	broad.mit.edu;bcgsc.ca	37	12	104060114	104060114	+	Missense_Mutation	SNP	G	G	A	rs147674384		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	STAB2	NM_017564	exon19	c.G2068A	p.A690T	.	.	142	7	122	1	G|1.000;A|0.000	104
STIM2	57620	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	27024472	27024472	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	STIM2	NM_001169118	exon13	c.T2119G	p.S707A	.	.	118	23	103	0	.	91
SYVN1	84447	broad.mit.edu	37	11	64899776	64899776	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	SYVN1	NM_172230	exon6	c.C474A	p.H158Q	.	.	222	4	157	0	.	91
TARP	0	hgsc.bcm.edu;broad.mit.edu;mdanderson.org	37	7	38305036	38305036	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	.	NM_001003806	exon2	c.T59C	p.L20P	.	.	240	65	181	0	.	.
TAS1R1	80835	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	6635364	6635364	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	TAS1R1	NM_138697	exon3	c.G1172A	p.R391Q	.	.	104	30	117	1	.	516
TAS2R30	259293	bcgsc.ca	37	12	11286214	11286214	+	Missense_Mutation	SNP	C	C	G	rs200082783	byfrequency	TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	.	NM_001097643	exon1	c.G630C	p.Q210H	.	.	188	27	171	3	C|0.944;G|0.055	.
TAS2R30	259293	bcgsc.ca	37	12	11286249	11286249	+	Missense_Mutation	SNP	T	T	C	rs77777159		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	.	NM_001097643	exon1	c.A595G	p.I199V	.	.	209	25	181	3	C|1.000;|0.000	.
TAS2R30	259293	ucsc.edu;bcgsc.ca	37	12	11286184	11286184	+	Silent	SNP	G	G	A	rs201738458		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	.	NM_001097643	exon1	c.C660T	p.S220S	.	.	184	27	161	3	.	.
TCP10L2	401285	bcgsc.ca	37	6	167592571	167592571	+	Missense_Mutation	SNP	G	G	A	rs28690444	byfrequency	TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	.	NM_001145121	exon6	c.G730A	p.A244T	.	.	103	11	85	1	G|0.965;A|0.035	.
TCP10L2	401285	ucsc.edu	37	6	167592601	167592601	+	Missense_Mutation	SNP	G	G	A	rs200019718	byfrequency	TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	.	NM_001145121	exon6	c.G760A	p.G254R	.	.	92	16	70	2	G|0.941;A|0.059	.
TET3	200424	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	2	74275063	74275063	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	.	NM_144993	exon1	c.G1614C	p.R538S	.	.	135	7	101	0	.	.
TG	7038	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	133953779	133953779	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	TG	NM_003235	exon26	c.T5225C	p.V1742A	.	.	286	78	233	1	.	145
TLE1	7088	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	9	84208092	84208092	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	TLE1	NM_005077	exon15	c.C1429T	p.Q477X	.	.	154	56	129	0	.	92
TMEM8A	58986	ucsc.edu	37	16	427516	427516	+	Silent	SNP	T	T	C	rs11649031	byfrequency	TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	TMEM8A	NM_021259	exon3	c.A369G	p.V123V	.	.	23	6	10	0	T|0.429;C|0.571	92
TPSAB1	7177	bcgsc.ca	37	16	1291318	1291318	+	Missense_Mutation	SNP	G	G	C	rs71384640		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	TPSAB1	NM_003294	exon3	c.G226C	p.V76L	.	.	57	6	56	0	C|1.000;|0.000	22
TRAPPC8	22878	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	18	29419280	29419280	+	Silent	SNP	T	T	C	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	TRAPPC8	NM_014939	exon27	c.A3978G	p.Q1326Q	.	.	50	19	41	0	.	159
TULP4	56995	ucsc.edu	37	6	158900886	158900886	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	TULP4	NM_020245	exon7	c.T1130C	p.L377P	.	.	38	4	76	0	.	91
UBA1	7317	broad.mit.edu;ucsc.edu;bcgsc.ca	37	X	47072228	47072228	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	UBA1	NM_153280	exon22	c.A2612G	p.E871G	.	.	376	95	316	1	.	227
UGT2B4	7363	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	4	70360887	70360889	+	In_Frame_Del	DEL	CTT	CTT	-	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	CTT	CTT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	UGT2B4	NM_021139	exon1	c.691_693del	p.231_231del	.	.	99	15	105	0	.	92
USP1	7398	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	1	62913095	62913095	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	USP1	NM_001017415	exon7	c.A1333G	p.S445G	.	.	103	9	94	0	.	659
USP42	84132	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	7	6194392	6194392	+	Silent	SNP	C	C	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	USP42	NM_032172	exon15	c.C3207T	p.Y1069Y	.	.	14	4	21	0	.	659
VAV3	10451	broad.mit.edu;bcgsc.ca;mdanderson.org	37	1	108507415	108507415	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	VAV3	NM_006113	exon1	c.A77G	p.D26G	.	.	183	37	197	3	.	1339
VEZT	55591	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	95676231	95676231	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	VEZT	NM_017599	exon8	c.G1139T	p.G380V	.	.	148	32	107	1	.	23
XPOT	11260	hgsc.bcm.edu	37	12	64833062	64833062	+	Silent	SNP	G	G	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	XPOT	NM_007235	exon23	c.G2772T	p.L924L	.	.	95	4	71	0	.	652
YIPF3	25844	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	43480544	43480544	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	YIPF3	NM_015388	exon7	c.C735G	p.F245L	.	.	190	37	155	0	.	90
ZAR1L	646799	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	13	32878064	32878064	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	ZAR1L	NM_001136571	exon4	c.C918G	p.D306E	.	.	89	7	108	0	.	68
ZCCHC2	54877	broad.mit.edu;ucsc.edu;mdanderson.org	37	18	60225965	60225965	+	Nonsense_Mutation	SNP	T	T	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	ZCCHC2	NM_017742	exon7	c.T1454G	p.L485X	.	.	133	46	131	2	.	432
ZIC1	7545	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	147128637	147128637	+	Silent	SNP	C	C	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	ZIC1	NM_003412	exon1	c.C738T	p.F246F	.	.	184	46	153	0	.	91
ZMAT4	79698	broad.mit.edu;ucsc.edu;mdanderson.org	37	8	40532341	40532341	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	ZMAT4	NM_024645	exon5	c.G459A	p.W153X	.	.	128	27	104	1	.	92
ZNF141	7700	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	366775	366775	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	ZNF141	NM_003441	exon4	c.T549A	p.F183L	.	.	85	20	64	0	.	90
ZNF175	7728	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	52090484	52090484	+	Silent	SNP	T	T	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	ZNF175	NM_007147	exon5	c.T900A	p.I300I	.	.	131	33	102	0	.	90
ZNF430	80264	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	21240807	21240807	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	ZNF430	NM_025189	exon5	c.A1693G	p.R565G	.	.	19	11	25	0	.	516
ZNF441	126068	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	11892231	11892231	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	ZNF441	NM_152355	exon4	c.A1592G	p.Y531C	.	.	42	10	38	0	.	69
ZNF536	9745	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	31038889	31038889	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	ZNF536	NM_014717	exon4	c.G2363A	p.G788D	.	.	79	14	85	0	.	144
TCP10L2	401285	ucsc.edu	37	6	167592605	167592606	+	Missense_Mutation	DNP	TT	TT	GA	novel		TCGA-FV-A495-01A-11D-A25V-10	TCGA-FV-A495-10A-01D-A25V-10	TT	TT	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	84fe77b4-f6cc-49bf-a6b9-1621ec9394f8	88a0f90d-e075-45da-b4bf-8dfc9fd6b6a8	.	.	.	.	.	p.V255G	.	.	.	.	.	.	.	
