Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	TranscriptID	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov_SOL	TVarCov_SOL	NTotCov_SOL	NVarCov_SOL	dbSNPPopFreq	COSMIC_Gene_Freq
A2M	2	ucsc.edu;bcgsc.ca	37	12	9225057	9225057	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	A2M	NM_000014	exon31	c.C4001A	p.P1334Q	.	.	45	4	49	0	.	515
AADACL4	343066	bcgsc.ca	37	1	12704642	12704642	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	AADACL4	NM_001013630	exon1	c.A77G	p.E26G	.	.	80	5	102	0	.	68
AAK1	22848	bcgsc.ca	37	2	69759218	69759218	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	AAK1	NM_014911	exon6	c.A611G	p.N204S	.	.	129	6	80	0	.	333
ABCA12	26154	bcgsc.ca	37	2	215851402	215851402	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ABCA12	NM_173076	exon28	c.A4027T	p.T1343S	.	.	58	5	65	0	.	99
ABCA13	154664	bcgsc.ca	37	7	48377971	48377971	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ABCA13	NM_152701	exon29	c.A10123G	p.R3375G	.	.	87	4	70	0	.	521
ABCA13	154664	bcgsc.ca	37	7	48452126	48452126	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ABCA13	NM_152701	exon41	c.C12405A	p.N4135K	.	.	64	4	50	0	.	521
ABCA6	23460	bcgsc.ca	37	17	67110968	67110968	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ABCA6	NM_080284	exon13	c.G1717T	p.V573L	.	.	104	5	131	0	.	159
ABCA8	10351	bcgsc.ca	37	17	66881415	66881415	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ABCA8	NM_007168	exon25	c.C3351A	p.F1117L	.	.	62	4	55	0	.	93
ABCB1	5243	bcgsc.ca	37	7	87183214	87183214	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ABCB1	NM_000927	exon10	c.G862A	p.G288R	.	.	103	4	99	0	.	582
ABCB6	10058	bcgsc.ca	37	2	220078604	220078604	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ABCB6	NM_005689	exon9	c.G1522T	p.G508W	.	.	118	7	83	0	.	153
ABCC8	6833	bcgsc.ca	37	11	17434254	17434254	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ABCC8	NM_000352	exon21	c.G2515A	p.V839M	.	.	25	4	40	0	.	91
ABHD12B	145447	bcgsc.ca	37	14	51370868	51370868	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ABHD12B	NM_001206673	exon12	c.A1019G	p.H340R	.	.	107	6	96	0	.	153
ABI2	10152	bcgsc.ca	37	2	204281690	204281690	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ABI2	NM_005759	exon9	c.C1138A	p.P380T	.	.	65	4	36	0	.	90
ACACA	31	bcgsc.ca	37	17	35598909	35598909	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ACACA	NM_198834	exon23	c.T2992C	p.F998L	.	.	104	5	68	0	.	154
ACOX3	8310	ucsc.edu;bcgsc.ca	37	4	8372711	8372711	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ACOX3	NM_003501	exon17	c.A1907G	p.D636G	.	.	33	4	25	0	.	90
ACSF3	197322	ucsc.edu	37	16	89211787	89211787	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ACSF3	NM_174917	exon9	c.G1479A	p.L493L	.	.	32	4	11	0	.	68
ACTC1	70	bcgsc.ca	37	15	35084699	35084699	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ACTC1	NM_005159	exon4	c.G526T	p.A176S	.	.	64	4	84	1	.	92
ACTR2	10097	bcgsc.ca	37	2	65495833	65495833	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ACTR2	NM_001005386	exon10	c.C1165A	p.R389S	.	.	134	7	153	1	.	278
ACTR8	93973	ucsc.edu;bcgsc.ca	37	3	53905467	53905467	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ACTR8	NM_022899	exon11	c.G1359A	p.G453G	.	.	42	4	38	1	.	91
ACVR2A	92	bcgsc.ca	37	2	148672841	148672841	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ACVR2A	NM_001616	exon5	c.G610A	p.G204S	.	.	217	6	208	0	.	831
ACVRL1	94	bcgsc.ca	37	12	52306268	52306268	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ACVRL1	NM_000020	exon2	c.G10T	p.G4C	.	.	80	4	67	0	.	521
ADAM22	53616	bcgsc.ca	37	7	87757952	87757952	+	Silent	SNP	C	C	A	rs200084120	alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ADAM22	NM_021722	exon9	c.C714A	p.T238T	.	.	135	5	145	0	C|0.999;T|0.001	230
ADAM29	11086	bcgsc.ca	37	4	175897627	175897627	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ADAM29	NM_001130703	exon4	c.T951C	p.T317T	.	.	70	4	88	0	.	729
ADAM32	203102	ucsc.edu;bcgsc.ca	37	8	39022715	39022715	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ADAM32	NM_145004	exon9	c.T833C	p.I278T	.	.	34	4	32	0	.	227
ADAMTS14	140766	bcgsc.ca	37	10	72489100	72489100	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ADAMTS14	NM_139155	exon5	c.C921T	p.A307A	.	.	72	4	69	0	.	232
ADAMTSL3	57188	bcgsc.ca	37	15	84651982	84651982	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ADAMTSL3	NM_207517	exon21	c.C3602A	p.T1201K	.	.	41	4	38	0	.	1153
ADCY1	107	bcgsc.ca	37	7	45748058	45748058	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ADCY1	NM_021116	exon18	c.G2927T	p.R976L	.	.	77	4	82	1	.	95
ADCY5	111	ucsc.edu;bcgsc.ca	37	3	123018993	123018993	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ADCY5	NM_183357	exon15	c.C2874A	p.A958A	.	.	42	4	34	0	.	94
ADH1B	125	bcgsc.ca	37	4	100237169	100237169	+	Silent	SNP	C	C	A	rs139645116	byfrequency;alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ADH1B	NM_000668	exon5	c.G453T	p.T151T	.	.	117	5	103	1	C|0.998;T|0.002	136
ADORA2A	135	bcgsc.ca	37	22	24836822	24836822	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ADORA2A	NM_000675	exon3	c.C604A	p.L202M	.	.	118	5	131	1	.	90
AFAP1L2	84632	bcgsc.ca	37	10	116067658	116067658	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	AFAP1L2	NM_032550	exon10	c.A978G	p.K326K	.	.	64	4	67	0	.	136
AGPAT5	55326	bcgsc.ca	37	8	6614713	6614713	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	AGPAT5	NM_018361	exon8	c.A899G	p.D300G	.	.	70	4	55	0	.	90
AGTPBP1	23287	ucsc.edu	37	9	88200500	88200500	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	AGTPBP1	NM_015239	exon23	c.G2923T	p.D975Y	.	.	33	4	25	0	.	158
AGXT2L1	64850	bcgsc.ca	37	4	109669216	109669216	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	AGXT2L1	NM_031279	exon9	c.C1027A	p.L343I	.	.	131	6	104	0	.	91
AHSG	197	bcgsc.ca	37	3	186334302	186334302	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	AHSG	NM_001622	exon3	c.G395A	p.C132Y	.	.	85	5	70	0	.	90
AKAP13	11214	ucsc.edu	37	15	86123817	86123817	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	AKAP13	NM_007200	exon7	c.C2518T	p.L840L	.	.	43	4	17	0	.	258
AKAP14	158798	bcgsc.ca	37	X	119053890	119053890	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	AKAP14	NM_178813	exon6	c.T458C	p.V153A	.	.	84	5	86	1	.	226
AKR1D1	6718	ucsc.edu;bcgsc.ca	37	7	137773383	137773383	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	AKR1D1	NM_001190907	exon2	c.G130A	p.A44T	.	.	47	4	34	0	.	91
ALB	213	bcgsc.ca	37	4	74272366	74272366	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ALB	NM_000477	exon3	c.A158T	p.Q53L	.	.	72	4	55	0	.	96
ALCAM	214	bcgsc.ca	37	3	105266027	105266027	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ALCAM	NM_001627	exon10	c.C1139T	p.S380F	.	.	230	7	221	1	.	92
ALDH1A1	216	bcgsc.ca	37	9	75526952	75526952	+	Silent	SNP	C	C	T	rs202153674		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ALDH1A1	NM_000689	exon10	c.G1122A	p.P374P	.	.	68	4	80	0	C|0.999;T|0.000	230
ALDOB	229	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	104192169	104192169	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ALDOB	NM_000035	exon3	c.C192A	p.F64L	.	.	134	33	126	0	.	226
ALG13	79868	bcgsc.ca	37	X	110928317	110928317	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ALG13	NM_001168385	exon3	c.C369A	p.F123L	.	.	131	5	116	0	.	130
ALG2	85365	ucsc.edu	37	9	101980922	101980922	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ALG2	NM_033087	exon2	c.C545A	p.A182D	.	.	36	4	35	0	.	92
ALOX15	246	bcgsc.ca	37	17	4541930	4541930	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ALOX15	NM_001140	exon5	c.A592G	p.K198E	.	.	109	7	106	0	.	229
ALPK2	115701	bcgsc.ca	37	18	56171344	56171344	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ALPK2	NM_052947	exon11	c.C6066T	p.N2022N	.	.	84	5	70	0	.	765
AMIGO2	347902	bcgsc.ca	37	12	47471928	47471928	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	AMIGO2	NM_181847	exon2	c.C858T	p.I286I	.	.	60	5	64	0	.	92
AMZ1	155185	ucsc.edu;bcgsc.ca	37	7	2748347	2748347	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	AMZ1	NM_133463	exon4	c.C598A	p.H200N	.	.	27	4	22	0	.	90
ANK3	288	ucsc.edu	37	10	61847956	61847956	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ANK3	NM_001204404	exon30	c.A3492G	p.Q1164Q	.	.	48	4	47	0	.	107
ANKAR	150709	bcgsc.ca	37	2	190554462	190554462	+	Missense_Mutation	SNP	A	A	G	rs17271239	byfrequency	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ANKAR	NM_144708	exon3	c.A811G	p.N271D	.	.	148	5	103	0	A|0.991;G|0.009	72
ANKHD1	54882	bcgsc.ca	37	5	139907596	139907596	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ANKHD1	NM_017747	exon28	c.G5226T	p.M1742I	.	.	243	8	182	0	.	185
ANKRD26	22852	bcgsc.ca	37	10	27326245	27326245	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ANKRD26	NM_014915	exon23	c.A2567G	p.Q856R	.	.	79	4	67	0	.	138
ANKRD32	84250	bcgsc.ca	37	5	94030792	94030792	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ANKRD32	NM_032290	exon21	c.T2952C	p.T984T	.	.	159	5	107	0	.	92
ANKRD50	57182	bcgsc.ca	37	4	125593465	125593465	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ANKRD50	NM_020337	exon4	c.A967G	p.I323V	.	.	67	4	83	0	.	90
ANKUB1	389161	bcgsc.ca	37	3	149498215	149498215	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001144960	exon3	c.T262C	p.F88L	.	.	78	4	87	0	.	.
ANLN	54443	bcgsc.ca	37	7	36460215	36460215	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ANLN	NM_018685	exon12	c.A2025G	p.A675A	.	.	70	4	60	0	.	517
ANO2	57101	bcgsc.ca	37	12	5848554	5848554	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ANO2	NM_020373	exon13	c.C1351A	p.L451M	.	.	74	4	60	0	.	139
AOC2	314	bcgsc.ca	37	17	41001679	41001679	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	AOC2	NM_009590	exon3	c.C1936A	p.Q646K	.	.	68	5	34	0	.	92
AP2B1	163	bcgsc.ca	37	17	33977779	33977779	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	AP2B1	NM_001282	exon13	c.T1767C	p.H589H	.	.	129	6	89	0	.	91
AP3B1	8546	bcgsc.ca	37	5	77406055	77406055	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	AP3B1	NM_003664	exon20	c.A2373G	p.E791E	.	.	132	5	119	0	.	90
AP3D1	8943	bcgsc.ca	37	19	2121276	2121276	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	AP3D1	NM_001261826	exon13	c.A1136G	p.K379R	.	.	57	4	59	1	.	90
AP4B1	10717	bcgsc.ca	37	1	114437979	114437979	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	AP4B1	NM_006594	exon11	c.A1928G	p.Q643R	.	.	69	4	66	0	.	93
AP4E1	23431	bcgsc.ca	37	15	51233675	51233675	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	AP4E1	NM_007347	exon9	c.T980C	p.I327T	.	.	155	5	164	0	.	90
APBA2	321	bcgsc.ca	37	15	29346358	29346358	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	APBA2	NM_005503	exon3	c.C271A	p.P91T	.	.	53	4	60	0	.	90
APC	324	bcgsc.ca	37	5	112174420	112174420	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	APC	NM_001127510	exon17	c.T3129C	p.P1043P	.	.	98	5	85	0	.	12026
APOB	338	bcgsc.ca	37	2	21233821	21233821	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	APOB	NM_000384	exon26	c.T5919C	p.T1973T	.	.	106	6	65	0	.	175
APOB	338	bcgsc.ca	37	2	21235014	21235014	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	APOB	NM_000384	exon26	c.G4726T	p.G1576W	.	.	129	6	119	0	.	175
APOB	338	bcgsc.ca	37	2	21251333	21251333	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	APOB	NM_000384	exon13	c.G1695A	p.L565L	.	.	62	4	48	0	.	175
APOB	338	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	2	21235442	21235442	+	Nonsense_Mutation	SNP	G	G	T	rs200708197	alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	APOB	NM_000384	exon26	c.C4298A	p.S1433X	.	.	73	20	73	0	G|0.999;A|0.001	175
APOBEC1	339	bcgsc.ca	37	12	7802231	7802231	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	APOBEC1	NM_001644	exon5	c.T623C	p.L208P	.	.	148	5	130	1	.	226
ARAP2	116984	bcgsc.ca	37	4	36093607	36093607	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ARAP2	NM_015230	exon28	c.T4321C	p.L1441L	.	.	135	5	139	0	.	93
ARF5	381	ucsc.edu	37	7	127229572	127229572	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ARF5	NM_001662	exon3	c.T182C	p.I61T	.	.	42	4	48	0	.	228
ARFGEF1	10565	bcgsc.ca	37	8	68183937	68183937	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ARFGEF1	NM_006421	exon10	c.G1572A	p.E524E	.	.	81	4	68	0	.	294
ARHGAP15	55843	bcgsc.ca	37	2	144194523	144194523	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ARHGAP15	NM_018460	exon8	c.C615A	p.F205L	.	.	134	6	98	0	.	653
ARHGAP18	93663	bcgsc.ca	37	6	129920485	129920485	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ARHGAP18	NM_033515	exon12	c.T1589A	p.V530E	.	.	218	6	178	0	.	230
ARHGAP19	84986	bcgsc.ca	37	10	98988956	98988956	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ARHGAP19	NM_032900	exon11	c.G1422T	p.T474T	.	.	138	6	127	0	.	651
ARHGAP22	58504	bcgsc.ca	37	10	49687651	49687651	+	Missense_Mutation	SNP	G	G	T	rs199869395	alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ARHGAP22	NM_001256024	exon4	c.C479A	p.P160H	.	.	53	4	56	0	G|0.999;C|0.000	228
ARHGAP31	57514	ucsc.edu;bcgsc.ca	37	3	119133643	119133643	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ARHGAP31	NM_020754	exon12	c.A2867G	p.D956G	.	.	25	4	22	0	.	92
ARHGAP42	143872	bcgsc.ca	37	11	100859528	100859528	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_152432	exon24	c.T2621C	p.L874P	.	.	54	4	47	0	.	.
ARHGEF10L	55160	ucsc.edu;bcgsc.ca	37	1	17981129	17981129	+	Splice_Site	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ARHGEF10L	NM_018125	exon23	c.2395-2A>G	.	.	.	45	5	52	0	.	292
ARHGEF26	26084	bcgsc.ca	37	3	153867177	153867177	+	Splice_Site	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ARHGEF26	NM_001251962	exon5	c.1270-1G>T	.	.	.	60	4	68	0	.	47
ARHGEF3	50650	bcgsc.ca	37	3	56779475	56779475	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ARHGEF3	NM_001128615	exon10	c.T724C	p.S242P	.	.	74	4	67	0	.	228
ARHGEF9	23229	bcgsc.ca	37	X	62917135	62917135	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ARHGEF9	NM_015185	exon4	c.A431T	p.Q144L	.	.	48	4	51	0	.	233
ARID4B	51742	bcgsc.ca	37	1	235419043	235419043	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ARID4B	NM_016374	exon5	c.A206G	p.K69R	.	.	228	7	200	0	.	228
ARL15	54622	bcgsc.ca	37	5	53409129	53409129	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ARL15	NM_019087	exon4	c.A365G	p.E122G	.	.	70	4	54	0	.	91
ARMC8	25852	bcgsc.ca	37	3	137986002	137986002	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ARMC8	NM_015396	exon16	c.A1263T	p.L421F	.	.	93	6	105	0	.	90
ARPP21	10777	bcgsc.ca	37	3	35723287	35723287	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ARPP21	NM_001267618	exon2	c.G44T	p.G15V	.	.	83	5	89	1	.	93
ARVCF	421	ucsc.edu	37	22	19968895	19968895	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ARVCF	NM_001670	exon5	c.A735G	p.P245P	.	.	23	4	16	0	.	91
ASH1L	55870	bcgsc.ca	37	1	155448665	155448665	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ASH1L	NM_018489	exon3	c.T3996C	p.S1332S	.	.	148	6	130	0	.	234
ASPG	374569	bcgsc.ca	37	14	104571724	104571724	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001080464	exon10	c.C1110T	p.P370P	.	.	52	4	54	0	.	.
ASTN2	23245	bcgsc.ca	37	9	119380623	119380623	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ASTN2	NM_014010	exon18	c.C3182A	p.T1061K	.	.	82	4	75	0	.	161
ASZ1	136991	ucsc.edu;bcgsc.ca	37	7	117060227	117060227	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ASZ1	NM_130768	exon4	c.G430T	p.V144F	.	.	18	4	23	0	.	515
ATG4A	115201	bcgsc.ca	37	X	107372022	107372022	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ATG4A	NM_178270	exon3	c.C133A	p.L45M	.	.	62	4	65	0	.	131
ATP10D	57205	bcgsc.ca	37	4	47548712	47548712	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ATP10D	NM_020453	exon10	c.C1468A	p.L490I	.	.	62	4	46	0	.	93
ATP13A3	79572	bcgsc.ca	37	3	194149645	194149645	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ATP13A3	NM_024524	exon27	c.T2876C	p.I959T	.	.	212	7	201	0	.	69
ATP1A3	478	bcgsc.ca	37	19	42480618	42480618	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ATP1A3	NM_001256214	exon15	c.C2083A	p.R695S	.	.	103	6	97	0	.	92
ATP1B1	481	bcgsc.ca	37	1	169094137	169094137	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ATP1B1	NM_001677	exon3	c.C242T	p.P81L	.	.	95	4	78	0	.	540
ATP2B1	490	bcgsc.ca	37	12	90049478	90049478	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ATP2B1	NM_001001323	exon1	c.A186G	p.K62K	.	.	74	4	53	0	.	516
ATP4A	495	ucsc.edu;bcgsc.ca	37	19	36049328	36049328	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ATP4A	NM_000704	exon10	c.T1436C	p.M479T	.	.	43	5	43	0	.	91
ATP5A1	498	bcgsc.ca	37	18	43664580	43664580	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ATP5A1	NM_004046	exon11	c.G1470T	p.A490A	.	.	103	4	106	0	.	90
ATP5L2	267020	bcgsc.ca	37	22	43036157	43036157	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001165877	exon1	c.A124G	p.T42A	.	.	16	4	28	0	.	.
ATP6V0B	533	ucsc.edu	37	1	44441481	44441481	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ATP6V0B	NM_004047	exon2	c.A77T	p.Y26F	.	.	48	4	42	0	.	153
ATP6V1B1	525	bcgsc.ca	37	2	71185249	71185249	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ATP6V1B1	NM_001692	exon3	c.T248C	p.V83A	.	.	61	4	75	0	.	91
ATP6V1B1	525	bcgsc.ca	37	2	71188076	71188076	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ATP6V1B1	NM_001692	exon7	c.C611A	p.A204E	.	.	82	5	68	0	.	91
ATP6V1B2	526	bcgsc.ca	37	8	20074782	20074782	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ATP6V1B2	NM_001693	exon12	c.G1213T	p.A405S	.	.	62	4	63	0	.	90
ATP8B3	148229	broad.mit.edu;bcgsc.ca	37	19	1807173	1807173	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_138813	exon6	c.C609T	p.D203D	.	.	58	7	46	0	.	.
ATP9A	10079	bcgsc.ca	37	20	50286626	50286626	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ATP9A	NM_006045	exon13	c.G1203T	p.M401I	.	.	106	5	77	1	.	94
ATP9A	10079	ucsc.edu	37	20	50273579	50273579	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ATP9A	NM_006045	exon14	c.C1404T	p.N468N	.	.	40	4	27	0	.	94
ATXN2L	11273	bcgsc.ca	37	16	28845485	28845485	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ATXN2L	NM_148414	exon16	c.C2125A	p.Q709K	.	.	52	4	54	0	.	92
ATXN7	6314	bcgsc.ca	37	3	63938084	63938084	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ATXN7	NM_000333	exon5	c.C424T	p.H142Y	.	.	127	5	138	0	.	90
AUH	549	bcgsc.ca	37	9	94060307	94060307	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	AUH	NM_001698	exon5	c.G557T	p.G186V	.	.	57	5	34	0	.	226
AVL9	23080	bcgsc.ca	37	7	32609664	32609664	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	AVL9	NM_015060	exon11	c.G1248A	p.Q416Q	.	.	93	4	80	0	.	90
AXIN2	8313	bcgsc.ca	37	17	63533442	63533442	+	Missense_Mutation	SNP	C	C	A	rs146744662	byfrequency;alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	AXIN2	NM_004655	exon6	c.G1712T	p.G571V	.	.	59	4	33	0	C|0.999;T|0.001	658
B3GNT1	11041	ucsc.edu	37	11	66114249	66114249	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	B3GNT1	NM_006876	exon1	c.G768T	p.V256V	.	.	32	6	11	0	.	90
B4GALT4	8702	bcgsc.ca	37	3	118937531	118937531	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	B4GALT4	NM_212543	exon7	c.G763A	p.G255R	.	.	73	4	60	0	.	90
BACH1	571	bcgsc.ca	37	21	30693622	30693622	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	BACH1	NM_206866	exon2	c.G21T	p.S7S	.	.	55	4	65	0	.	92
BAG6	7917	bcgsc.ca	37	6	31606932	31606932	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	BAG6	NM_004639	exon25	c.G3375T	p.Q1125H	.	.	79	5	56	0	.	154
BAG6	7917	bcgsc.ca	37	6	31615485	31615485	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	BAG6	NM_004639	exon7	c.C689T	p.P230L	.	.	35	4	54	0	.	154
BAI3	577	bcgsc.ca	37	6	69728379	69728379	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	BAI3	NM_001704	exon13	c.A2095G	p.T699A	.	.	48	4	36	0	.	1148
BBX	56987	bcgsc.ca	37	3	107451816	107451816	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	BBX	NM_001142568	exon7	c.G615A	p.M205I	.	.	93	4	90	0	.	94
BCL6B	255877	ucsc.edu;bcgsc.ca	37	17	6927950	6927950	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	BCL6B	NM_181844	exon4	c.G632T	p.S211I	.	.	29	4	39	0	.	227
BEST1	7439	hgsc.bcm.edu;broad.mit.edu	37	11	61723374	61723376	+	In_Frame_Del	DEL	CAC	CAC	-	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	CAC	CAC	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	BEST1	NM_004183	exon4	c.432_434del	p.144_145del	.	.	35	13	25	0	.	90
BHMT	635	bcgsc.ca	37	5	78415157	78415157	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	BHMT	NM_001713	exon3	c.A242G	p.D81G	.	.	56	4	44	0	.	91
BIRC6	57448	bcgsc.ca	37	2	32617113	32617113	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	BIRC6	NM_016252	exon5	c.G846T	p.L282L	.	.	38	5	40	0	.	233
BIRC6	57448	bcgsc.ca	37	2	32695350	32695350	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	BIRC6	NM_016252	exon31	c.C6462A	p.P2154P	.	.	75	4	43	0	.	233
BIRC6	57448	ucsc.edu	37	2	32707526	32707526	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	BIRC6	NM_016252	exon39	c.G7572T	p.W2524C	.	.	43	4	24	0	.	233
BMS1	9790	bcgsc.ca	37	10	43292599	43292599	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	BMS1	NM_014753	exon10	c.A1907G	p.D636G	.	.	72	4	65	0	.	93
BMX	660	bcgsc.ca	37	X	15574208	15574208	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	BMX	NM_001721	exon19	c.C1966A	p.R656S	.	.	56	4	80	0	.	541
BOD1L1	259282	bcgsc.ca	37	4	13583862	13583862	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_148894	exon19	c.A8591G	p.E2864G	.	.	100	4	62	1	.	.
BPIFA2	140683	bcgsc.ca	37	20	31763267	31763267	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_080574	exon5	c.A465G	p.A155A	.	.	65	5	51	0	.	.
BRCC3	79184	broad.mit.edu;bcgsc.ca	37	X	154348355	154348355	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	BRCC3	NM_024332	exon11	c.A881G	p.N294S	.	.	86	6	100	0	.	706
BRWD3	254065	bcgsc.ca	37	X	79936986	79936986	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	BRWD3	NM_153252	exon40	c.C4508A	p.A1503D	.	.	45	4	41	1	.	134
BSN	8927	bcgsc.ca	37	3	49692694	49692694	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	BSN	NM_003458	exon5	c.A5705G	p.D1902G	.	.	66	5	39	0	.	97
BTBD7	55727	bcgsc.ca	37	14	93723573	93723573	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	BTBD7	NM_001002860	exon6	c.T1576C	p.L526L	.	.	75	4	65	0	.	91
BTBD9	114781	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	38256182	38256182	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	BTBD9	NM_052893	exon9	c.C1320T	p.V440V	.	.	59	13	67	0	.	226
BZRAP1	9256	bcgsc.ca	37	17	56402924	56402924	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	BZRAP1	NM_004758	exon4	c.C721A	p.L241M	.	.	49	4	41	0	.	229
C10orf137	26098	bcgsc.ca	37	10	127442368	127442368	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C10orf137	NM_001202438	exon24	c.C3499A	p.L1167I	.	.	102	5	87	0	.	590
C10orf32	119032	bcgsc.ca	37	10	104620133	104620133	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C10orf32	NM_001136200	exon2	c.C186A	p.A62A	.	.	67	4	63	0	.	90
C10orf90	118611	bcgsc.ca	37	10	128153452	128153452	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C10orf90	NM_001004298	exon4	c.T1347C	p.L449L	.	.	106	6	108	1	.	92
C11orf74	119710	bcgsc.ca	37	11	36657661	36657661	+	Missense_Mutation	SNP	A	A	G	rs202135910		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C11orf74	NM_138787	exon4	c.C352G	p.Q118E	.	.	58	4	62	0	A|0.999;G|0.000	68
C11orf96	387763	broad.mit.edu;bcgsc.ca;mdanderson.org	37	11	43964686	43964686	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C11orf96	NM_001145033	exon1	c.A232G	p.K78E	.	.	31	10	39	0	.	46
C12orf10	60314	bcgsc.ca	37	12	53694044	53694044	+	Silent	SNP	G	G	A	rs113495940	byfrequency	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C12orf10	NM_021640	exon2	c.G327A	p.Q109Q	.	.	22	4	27	0	G|0.996;A|0.004	92
C12orf23	90488	bcgsc.ca	37	12	107364984	107364984	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C12orf23	NM_152261	exon4	c.G166T	p.G56C	.	.	111	5	119	0	.	90
C12orf50	160419	bcgsc.ca	37	12	88376934	88376934	+	Silent	SNP	G	G	T	rs146623464		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C12orf50	NM_152589	exon12	c.C1165A	p.R389R	.	.	51	4	51	0	G|1.000;T|0.000	93
C14orf142	84520	ucsc.edu	37	14	93673207	93673207	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C14orf142	NM_032490	exon1	c.G176A	p.R59Q	.	.	27	7	18	1	.	90
C14orf37	145407	bcgsc.ca	37	14	58605144	58605144	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C14orf37	NM_001001872	exon2	c.T933A	p.S311R	.	.	60	4	43	0	.	90
C15orf60	283677	bcgsc.ca	37	15	73843407	73843407	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C15orf60	NM_001042367	exon4	c.G462A	p.Q154Q	.	.	58	4	49	0	.	46
C1orf101	257044	bcgsc.ca	37	1	244724092	244724092	+	Silent	SNP	G	G	T	rs7544794	byfrequency;alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C1orf101	NM_173807	exon10	c.G1152T	p.S384S	.	.	126	7	85	0	G|0.779;A|0.221	154
C1orf101	257044	bcgsc.ca	37	1	244724310	244724310	+	Missense_Mutation	SNP	G	G	T	rs201309162	alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C1orf101	NM_173807	exon10	c.G1370T	p.G457V	.	.	78	4	59	0	G|0.999;A|0.001	154
C1orf220	400798	bcgsc.ca	37	1	178514508	178514508	+	RNA	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C1orf220	.	.	.	.	.	.	118	5	95	1	.	68
C1orf85	112770	bcgsc.ca	37	1	156264806	156264806	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C1orf85	NM_001256608	exon2	c.T122C	p.V41A	.	.	103	6	66	0	.	92
C1orf94	84970	ucsc.edu	37	1	34666376	34666376	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C1orf94	NM_001134734	exon3	c.G1013T	p.W338L	.	.	35	4	61	1	.	90
C1S	716	bcgsc.ca	37	12	7177347	7177347	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C1S	NM_201442	exon12	c.G1459A	p.V487I	.	.	63	4	32	0	.	91
C1S	716	ucsc.edu	37	12	7175037	7175037	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C1S	NM_201442	exon10	c.G1157A	p.C386Y	.	.	44	4	47	0	.	91
C20orf26	26074	bcgsc.ca	37	20	20341027	20341027	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C20orf26	NM_015585	exon27	c.C3687T	p.P1229P	.	.	36	4	46	0	.	94
C21orf128	150147	bcgsc.ca	37	21	43523890	43523890	+	RNA	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	.	.	.	.	.	.	100	5	60	0	.	.
C2orf69	205327	bcgsc.ca	37	2	200790454	200790454	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C2orf69	NM_153689	exon2	c.C1003A	p.Q335K	.	.	112	5	75	0	.	23
C4orf51	646603	broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	146650320	146650320	+	Splice_Site	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001080531	exon4	c.367-1G>T	.	.	.	201	21	184	1	.	.
C4orf51	646603	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	146650321	146650321	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001080531	exon4	c.G367T	p.A123S	.	.	199	20	184	0	.	.
C5AR2	27202	bcgsc.ca	37	19	47844850	47844850	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001271750	exon2	c.T794C	p.L265P	.	.	31	4	28	1	.	.
C5orf15	56951	bcgsc.ca	37	5	133292670	133292670	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C5orf15	NM_020199	exon3	c.G678T	p.L226L	.	.	165	6	116	0	.	90
C5orf22	55322	bcgsc.ca	37	5	31538695	31538695	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C5orf22	NM_018356	exon4	c.G706A	p.G236R	.	.	98	6	72	0	.	92
C5orf24	134553	bcgsc.ca	37	5	134190897	134190897	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C5orf24	NM_001135586	exon2	c.C307A	p.R103R	.	.	109	5	86	0	.	90
C5orf42	65250	bcgsc.ca	37	5	37170174	37170174	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C5orf42	NM_023073	exon33	c.C6431A	p.P2144Q	.	.	177	6	115	0	.	94
C5orf42	65250	bcgsc.ca	37	5	37183660	37183660	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C5orf42	NM_023073	exon26	c.G4623T	p.W1541C	.	.	99	5	79	0	.	94
C5orf42	65250	bcgsc.ca	37	5	37239852	37239852	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C5orf42	NM_023073	exon7	c.T797C	p.L266P	.	.	166	6	130	0	.	94
C5orf42	65250	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	37227754	37227754	+	Silent	SNP	T	T	C	rs186540080	by1000genomes	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C5orf42	NM_023073	exon10	c.A1287G	p.L429L	.	.	136	23	110	0	T|0.999;C|0.000	94
C5orf51	285636	bcgsc.ca	37	5	41904559	41904559	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C5orf51	NM_175921	exon1	c.C90T	p.A30A	.	.	59	4	61	0	.	68
C5orf54	63920	bcgsc.ca	37	5	159822488	159822488	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C5orf54	NM_022090	exon2	c.A10G	p.K4E	.	.	55	4	33	0	.	91
C6orf165	154313	bcgsc.ca	37	6	88125559	88125559	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C6orf165	NM_001031743	exon5	c.C439A	p.P147T	.	.	53	5	50	1	.	90
C7	730	bcgsc.ca	37	5	40931241	40931241	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C7	NM_000587	exon3	c.G138A	p.Q46Q	.	.	50	4	35	0	.	22
C7	730	bcgsc.ca	37	5	40976903	40976903	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C7	NM_000587	exon16	c.A2126G	p.Q709R	.	.	137	6	126	1	.	22
C8orf33	65265	bcgsc.ca	37	8	146278141	146278141	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C8orf33	NM_023080	exon2	c.C176T	p.P59L	.	.	71	5	45	0	.	90
C9orf72	203228	bcgsc.ca	37	9	27548349	27548349	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	C9orf72	NM_018325	exon11	c.A1331G	p.D444G	.	.	61	4	66	1	.	517
CA5A	763	bcgsc.ca	37	16	87936084	87936084	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CA5A	NM_001739	exon4	c.A502G	p.K168E	.	.	185	7	233	2	.	90
CABIN1	23523	bcgsc.ca	37	22	24451340	24451340	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CABIN1	NM_001199281	exon9	c.A811G	p.K271E	.	.	90	6	78	0	.	94
CABYR	26256	bcgsc.ca	37	18	21739776	21739776	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CABYR	NM_153769	exon5	c.A882G	p.Q294Q	.	.	52	4	44	0	.	90
CACNA1D	776	bcgsc.ca	37	3	53766047	53766047	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CACNA1D	NM_000720	exon19	c.C2471T	p.T824I	.	.	63	4	83	0	.	100
CACNA1I	8911	bcgsc.ca	37	22	40068313	40068313	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CACNA1I	NM_021096	exon27	c.G4649T	p.R1550L	.	.	147	6	114	1	.	135
CAD	790	ucsc.edu	37	2	27462015	27462015	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CAD	NM_004341	exon32	c.T5168C	p.L1723P	.	.	47	4	23	0	.	295
CAMK1G	57172	bcgsc.ca	37	1	209785533	209785533	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CAMK1G	NM_020439	exon11	c.A1312G	p.T438A	.	.	91	5	77	0	.	389
CAMK2D	817	bcgsc.ca	37	4	114430793	114430793	+	Splice_Site	SNP	C	C	T	rs148603207		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CAMK2D	NM_001221	exon14	c.984+1G>A	.	.	.	49	5	56	0	C|1.000;T|0.000	334
CANX	821	bcgsc.ca	37	5	179136047	179136047	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CANX	NM_001746	exon6	c.C515A	p.P172Q	.	.	176	6	117	0	.	90
CAP2	10486	bcgsc.ca	37	6	17514143	17514143	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CAP2	NM_006366	exon7	c.C594T	p.Y198Y	.	.	89	5	57	0	.	91
CAPN8	388743	bcgsc.ca	37	1	223814768	223814768	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	.	.	.	.	.	.	66	4	57	0	.	.
CAPRIN2	65981	bcgsc.ca	37	12	30882229	30882229	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CAPRIN2	NM_023925	exon8	c.G1135T	p.D379Y	.	.	109	5	93	0	.	92
CASK	8573	bcgsc.ca	37	X	41379825	41379825	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CASK	NM_003688	exon27	c.A2614G	p.K872E	.	.	67	4	52	0	.	616
CASP1	834	bcgsc.ca	37	11	104899862	104899862	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CASP1	NM_001257118	exon7	c.C995A	p.S332Y	.	.	101	5	94	0	.	661
CASP1	834	bcgsc.ca	37	11	104900535	104900535	+	Missense_Mutation	SNP	C	C	A	rs45617533	byfrequency;alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CASP1	NM_001257118	exon6	c.G719T	p.R240L	.	.	87	5	86	0	C|0.998;T|0.002	661
CASP1	834	bcgsc.ca	37	11	104901179	104901179	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CASP1	NM_001257118	exon5	c.T505C	p.C169R	.	.	65	4	50	0	.	661
CAST	831	bcgsc.ca	37	5	96011257	96011257	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CAST	NM_001042440	exon2	c.A90G	p.K30K	.	.	119	7	98	0	.	517
CAST	831	bcgsc.ca	37	5	96075777	96075777	+	Silent	SNP	T	T	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CAST	NM_001042440	exon10	c.T711A	p.G237G	.	.	284	7	219	1	.	517
CAT	847	bcgsc.ca	37	11	34470861	34470861	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CAT	NM_001752	exon2	c.T189C	p.H63H	.	.	70	5	107	0	.	229
CATSPER1	117144	bcgsc.ca	37	11	65789249	65789249	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CATSPER1	NM_053054	exon3	c.T1531C	p.W511R	.	.	51	4	60	0	.	92
CATSPERD	257062	bcgsc.ca	37	19	5724835	5724835	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_152784	exon2	c.A88G	p.T30A	.	.	106	4	118	0	.	.
CATSPERG	57828	bcgsc.ca	37	19	38861234	38861234	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CATSPERG	NM_021185	exon29	c.G3282T	p.V1094V	.	.	128	6	139	0	.	92
CAV2	858	ucsc.edu;bcgsc.ca	37	7	116140371	116140371	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CAV2	NM_001233	exon2	c.T208C	p.W70R	.	.	42	4	61	0	.	90
CC2D2B	387707	bcgsc.ca	37	10	97791732	97791732	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CC2D2B	NM_001159747	exon12	c.G1173T	p.W391C	.	.	70	5	93	0	.	69
CCAR1	55749	bcgsc.ca	37	10	70513620	70513620	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CCAR1	NM_018237	exon11	c.A1130T	p.D377V	.	.	123	5	120	0	.	159
CCDC102B	79839	bcgsc.ca	37	18	66678327	66678327	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CCDC102B	NM_001093729	exon9	c.C1420A	p.Q474K	.	.	147	6	178	1	.	93
CCDC124	115098	bcgsc.ca	37	19	18047333	18047333	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CCDC124	NM_138442	exon2	c.A104G	p.E35G	.	.	61	4	58	0	.	68
CCDC136	64753	ucsc.edu;bcgsc.ca	37	7	128441554	128441554	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CCDC136	NM_022742	exon4	c.G661T	p.G221W	.	.	21	4	21	0	.	24
CCDC141	285025	bcgsc.ca	37	2	179732921	179732921	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CCDC141	NM_173648	exon16	c.C2406T	p.L802L	.	.	52	4	34	0	.	78
CCDC168	643677	ucsc.edu	37	13	103402375	103402375	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001146197	exon4	c.A672G	p.V224V	.	.	38	4	22	0	.	.
CCDC170	80129	bcgsc.ca	37	6	151936637	151936637	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_025059	exon10	c.G1770A	p.L590L	.	.	110	5	87	0	.	.
CCDC176	80127	bcgsc.ca	37	14	74500850	74500850	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_025057	exon4	c.C471T	p.I157I	.	.	168	5	194	0	.	.
CCDC180	0	bcgsc.ca	37	9	100132244	100132244	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_020893	exon32	c.C4362A	p.P1454P	.	.	63	4	63	1	.	.
CCDC27	148870	bcgsc.ca	37	1	3677974	3677974	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CCDC27	NM_152492	exon5	c.T841C	p.S281P	.	.	55	4	60	0	.	91
CCDC41	51134	bcgsc.ca	37	12	94772768	94772768	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CCDC41	NM_016122	exon7	c.T600C	p.N200N	.	.	94	4	81	0	.	90
CCDC65	85478	ucsc.edu;bcgsc.ca	37	12	49298806	49298806	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CCDC65	NM_033124	exon2	c.G210T	p.R70R	.	.	40	4	43	0	.	92
CCDC80	151887	broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	112358316	112358316	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CCDC80	NM_199511	exon2	c.C437A	p.A146E	.	.	41	6	35	0	.	92
CCDC85A	114800	bcgsc.ca	37	2	56420148	56420148	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CCDC85A	NM_001080433	exon2	c.C813A	p.P271P	.	.	78	4	52	0	.	73
CCNE2	9134	bcgsc.ca	37	8	95894471	95894471	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CCNE2	NM_057749	exon11	c.T990C	p.P330P	.	.	86	5	73	0	.	414
CCPG1	9236	bcgsc.ca	37	15	55652985	55652985	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CCPG1	NM_020739	exon8	c.A986G	p.N329S	.	.	214	7	218	2	.	91
CCR3	1232	bcgsc.ca	37	3	46306968	46306968	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CCR3	NM_178328	exon3	c.A382G	p.K128E	.	.	133	6	132	0	.	660
CD180	4064	bcgsc.ca	37	5	66479827	66479827	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CD180	NM_005582	exon3	c.C844A	p.Q282K	.	.	132	6	103	0	.	91
CD22	933	bcgsc.ca	37	19	35827063	35827063	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CD22	NM_001185100	exon4	c.G537T	p.E179D	.	.	75	5	42	0	.	526
CD2	914	bcgsc.ca	37	1	117311381	117311381	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CD2	NM_001767	exon5	c.C1032T	p.N344N	.	.	47	4	48	0	.	153
CD83	9308	bcgsc.ca	37	6	14133988	14133988	+	Splice_Site	SNP	T	T	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CD83	NM_001251901	exon4	c.312+2T>A	.	.	.	66	4	78	0	.	90
CD93	22918	ucsc.edu;bcgsc.ca	37	20	23065836	23065836	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CD93	NM_012072	exon1	c.C994A	p.Q332K	.	.	42	5	36	0	.	153
CDCA2	157313	bcgsc.ca	37	8	25364165	25364165	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CDCA2	NM_152562	exon15	c.T1983C	p.S661S	.	.	64	4	46	0	.	90
CDK13	8621	bcgsc.ca	37	7	40117605	40117605	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CDK13	NM_003718	exon10	c.C2782A	p.R928R	.	.	102	5	124	0	.	548
CEACAM1	634	bcgsc.ca	37	19	43025474	43025474	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CEACAM1	NM_001184816	exon4	c.C903A	p.A301A	.	.	228	7	205	0	.	515
CELA2A	63036	bcgsc.ca	37	1	15788080	15788080	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CELA2A	NM_033440	exon3	c.G154A	p.G52S	.	.	93	5	67	0	.	92
CELP	1057	ucsc.edu	37	9	135962189	135962189	+	RNA	SNP	C	C	G	rs76509213		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CELP	.	.	.	.	.	.	21	7	15	3	C|0.250;G|0.750	46
CELSR1	9620	ucsc.edu	37	22	46930541	46930541	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CELSR1	NM_014246	exon1	c.A2527G	p.T843A	.	.	35	4	24	0	.	525
CENPH	64946	bcgsc.ca	37	5	68505601	68505601	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CENPH	NM_022909	exon9	c.T719C	p.L240P	.	.	45	4	45	0	.	153
CENPP	401541	bcgsc.ca	37	9	95375318	95375318	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CENPP	NM_001012267	exon8	c.A754G	p.N252D	.	.	58	4	43	0	.	49
CEP128	145508	bcgsc.ca	37	14	81223264	81223264	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CEP128	NM_152446	exon17	c.A2585G	p.D862G	.	.	181	6	177	1	.	91
CEP135	9662	bcgsc.ca	37	4	56851515	56851515	+	Silent	SNP	T	T	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CEP135	NM_025009	exon14	c.T1848A	p.V616V	.	.	161	7	222	0	.	94
CEP290	80184	bcgsc.ca	37	12	88454696	88454696	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CEP290	NM_025114	exon47	c.C6433A	p.Q2145K	.	.	266	7	286	0	.	96
CEP72	55722	bcgsc.ca	37	5	619224	619224	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CEP72	NM_018140	exon2	c.A202G	p.S68G	.	.	144	6	120	0	.	69
CEP85L	387119	bcgsc.ca	37	6	118801067	118801067	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001178035	exon11	c.A1890G	p.Q630Q	.	.	236	6	264	1	.	.
CEP85L	387119	bcgsc.ca	37	6	118812977	118812977	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001178035	exon7	c.T1318C	p.S440P	.	.	151	5	148	1	.	.
CERS5	91012	bcgsc.ca	37	12	50529787	50529787	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_147190	exon7	c.C702T	p.N234N	.	.	75	4	80	0	.	.
CES5A	221223	bcgsc.ca	37	16	55893596	55893596	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CES5A	NM_001190158	exon9	c.A1006G	p.T336A	.	.	42	5	56	0	.	94
CFTR	1080	bcgsc.ca	37	7	117251673	117251673	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CFTR	NM_000492	exon20	c.A3178G	p.K1060E	.	.	69	5	38	0	.	518
CGN	57530	bcgsc.ca	37	1	151496751	151496751	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CGN	NM_020770	exon7	c.G1318A	p.G440R	.	.	69	4	50	0	.	93
CHAF1B	8208	bcgsc.ca	37	21	37766890	37766890	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CHAF1B	NM_005441	exon5	c.G423A	p.G141G	.	.	151	6	156	1	.	92
CHAT	1103	ucsc.edu;bcgsc.ca	37	10	50863450	50863450	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CHAT	NM_020549	exon13	c.C1795T	p.L599F	.	.	50	4	35	0	.	514
CHD1	1105	bcgsc.ca	37	5	98192409	98192409	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CHD1	NM_001270	exon35	c.A4808G	p.K1603R	.	.	172	6	107	0	.	274
CHD1	1105	bcgsc.ca	37	5	98240775	98240775	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CHD1	NM_001270	exon2	c.T81C	p.A27A	.	.	60	4	58	0	.	274
CHD6	84181	bcgsc.ca	37	20	40049604	40049604	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CHD6	NM_032221	exon31	c.T5671C	p.L1891L	.	.	95	6	90	0	.	238
CHD7	55636	bcgsc.ca	37	8	61749521	61749521	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CHD7	NM_017780	exon17	c.G4135T	p.D1379Y	.	.	40	4	45	0	.	141
CHD9	80205	ucsc.edu;bcgsc.ca	37	16	53357978	53357978	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CHD9	NM_025134	exon39	c.T7817C	p.V2606A	.	.	41	4	39	0	.	272
CHEK1	1111	bcgsc.ca	37	11	125507394	125507394	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CHEK1	NM_001244846	exon8	c.C769A	p.P257T	.	.	64	4	62	0	.	1509
CHI3L2	1117	bcgsc.ca	37	1	111778703	111778703	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CHI3L2	NM_004000	exon7	c.C663T	p.P221P	.	.	75	6	68	0	.	514
CHL1	10752	bcgsc.ca	37	3	370000	370000	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CHL1	NM_001253388	exon3	c.A348G	p.G116G	.	.	114	5	86	1	.	583
CHMP1B	57132	bcgsc.ca	37	18	11851604	11851604	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_020412	exon1	c.G94A	p.E32K	.	.	59	5	40	0	.	.
CHMP7	91782	ucsc.edu;bcgsc.ca	37	8	23114093	23114093	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CHMP7	NM_152272	exon5	c.C778A	p.Q260K	.	.	42	4	39	1	.	90
CHODL	140578	ucsc.edu	37	21	19638299	19638299	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CHODL	NM_024944	exon6	c.C766T	p.Q256X	.	.	52	5	40	0	.	91
CHORDC1	26973	bcgsc.ca	37	11	89935646	89935646	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CHORDC1	NM_012124	exon11	c.C926A	p.P309Q	.	.	169	6	159	0	.	90
CHPF	79586	broad.mit.edu	37	2	220405057	220405057	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CHPF	NM_024536	exon4	c.G1376T	p.R459L	.	.	80	4	64	0	.	90
CHRNB1	1140	bcgsc.ca	37	17	7357798	7357798	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CHRNB1	NM_000747	exon8	c.C1003A	p.R335S	.	.	61	4	78	0	.	92
CHST1	8534	ucsc.edu	37	11	45671610	45671610	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CHST1	NM_003654	exon4	c.G864A	p.M288I	.	.	40	4	38	0	.	95
CIITA	4261	bcgsc.ca	37	16	11001591	11001591	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CIITA	NM_000246	exon11	c.G2242A	p.D748N	.	.	59	4	47	0	.	226
CIZ1	25792	ucsc.edu	37	9	130939875	130939875	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CIZ1	NM_001257975	exon10	c.C1878A	p.Y626X	.	.	53	4	19	0	.	92
CKS1B	1163	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	1	154947279	154947279	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CKS1B	NM_001826	exon1	c.C58T	p.R20X	.	.	185	53	133	0	.	251
CLCA2	9635	bcgsc.ca	37	1	86921172	86921172	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CLCA2	NM_006536	exon14	c.A2794G	p.R932G	.	.	124	5	65	0	.	155
CLCA4	22802	bcgsc.ca	37	1	87038330	87038330	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CLCA4	NM_012128	exon9	c.A1394G	p.Q465R	.	.	82	4	81	0	.	92
CLCN2	1181	ucsc.edu;bcgsc.ca	37	3	184069898	184069898	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CLCN2	NM_004366	exon22	c.A2318G	p.E773G	.	.	31	4	25	0	.	90
CLDN17	26285	ucsc.edu;bcgsc.ca	37	21	31538684	31538684	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CLDN17	NM_012131	exon1	c.G252T	p.M84I	.	.	26	4	25	0	.	92
CLDND1	56650	bcgsc.ca	37	3	98240178	98240178	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CLDND1	NM_001040182	exon3	c.T160C	p.F54L	.	.	93	5	83	0	.	91
CLEC4E	26253	bcgsc.ca	37	12	8688769	8688769	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CLEC4E	NM_014358	exon5	c.A405G	p.R135R	.	.	80	4	90	0	.	90
CLIC2	1193	bcgsc.ca	37	X	154507304	154507304	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CLIC2	NM_001289	exon6	c.G632A	p.G211E	.	.	52	4	52	0	.	194
CLPB	81570	bcgsc.ca	37	11	72004486	72004486	+	Silent	SNP	G	G	T	rs200471243		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CLPB	NM_030813	exon17	c.C2049A	p.I683I	.	.	104	5	91	0	G|0.999;T|0.001	91
CLRN3	119467	bcgsc.ca	37	10	129676525	129676525	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CLRN3	NM_152311	exon3	c.T569A	p.L190Q	.	.	78	4	96	0	.	91
CMTM2	146225	ucsc.edu;bcgsc.ca	37	16	66613724	66613724	+	Silent	SNP	C	C	A	rs111592429	byfrequency;alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CMTM2	NM_001199317	exon1	c.C214A	p.R72R	.	.	67	6	53	0	C|0.994;T|0.006	91
CMYA5	202333	bcgsc.ca	37	5	79029330	79029330	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CMYA5	NM_153610	exon2	c.C4742A	p.A1581D	.	.	73	5	70	1	.	77
CNBD2	140894	bcgsc.ca	37	20	34611634	34611634	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_080834	exon11	c.G1368A	p.L456L	.	.	60	4	47	0	.	.
CNOT2	4848	ucsc.edu	37	12	70726603	70726603	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CNOT2	NM_001199302	exon8	c.C626A	p.S209X	.	.	35	4	33	0	.	226
CNOT4	4850	bcgsc.ca	37	7	135080452	135080452	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CNOT4	NM_001190850	exon9	c.C1063A	p.P355T	.	.	147	7	130	0	.	90
CNOT4	4850	bcgsc.ca	37	7	135095315	135095315	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CNOT4	NM_001190850	exon7	c.T771C	p.G257G	.	.	84	4	72	0	.	90
CNPPD1	27013	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	220037368	220037368	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CNPPD1	NM_015680	exon8	c.A1173G	p.Q391Q	.	.	37	12	42	0	.	90
CNTNAP4	85445	bcgsc.ca	37	16	76486550	76486550	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CNTNAP4	NM_138994	exon7	c.T998C	p.L333P	.	.	56	4	58	0	.	70
COBLL1	22837	bcgsc.ca	37	2	165561494	165561494	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	COBLL1	NM_014900	exon7	c.C1118A	p.P373Q	.	.	115	5	113	0	.	93
COG6	57511	bcgsc.ca	37	13	40251666	40251666	+	Missense_Mutation	SNP	T	T	C	rs140097471	alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	COG6	NM_001145079	exon5	c.T490C	p.S164P	.	.	54	4	51	0	T|1.000;G|0.000	227
COL14A1	7373	bcgsc.ca	37	8	121180481	121180481	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	COL14A1	NM_021110	exon5	c.C431A	p.P144Q	.	.	84	4	56	1	.	543
COL16A1	1307	ucsc.edu;bcgsc.ca	37	1	32120418	32120418	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	COL16A1	NM_001856	exon68	c.A4332G	p.R1444R	.	.	45	4	45	0	.	98
COL17A1	1308	bcgsc.ca	37	10	105831792	105831792	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	COL17A1	NM_000494	exon8	c.G461T	p.R154L	.	.	132	5	86	0	.	95
COL19A1	1310	bcgsc.ca	37	6	70877917	70877917	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	COL19A1	NM_001858	exon38	c.G2446T	p.G816C	.	.	115	5	133	0	.	156
COL24A1	255631	bcgsc.ca	37	1	86497580	86497580	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	COL24A1	NM_152890	exon14	c.C2030T	p.P677L	.	.	149	6	120	0	.	94
COL27A1	85301	bcgsc.ca	37	9	116973288	116973288	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	COL27A1	NM_032888	exon12	c.G2349A	p.R783R	.	.	46	4	38	0	.	94
COL3A1	1281	bcgsc.ca	37	2	189858136	189858136	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	COL3A1	NM_000090	exon16	c.A1100G	p.Q367R	.	.	47	4	60	0	.	581
COL4A1	1282	bcgsc.ca	37	13	110827642	110827642	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	COL4A1	NM_001845	exon37	c.G3121A	p.G1041R	.	.	68	4	42	0	.	654
COL6A6	131873	bcgsc.ca	37	3	130287020	130287020	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	COL6A6	NM_001102608	exon5	c.G1973T	p.R658L	.	.	126	5	131	0	.	76
COPB1	1315	bcgsc.ca	37	11	14497352	14497352	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	COPB1	NM_001144062	exon13	c.C1595A	p.P532H	.	.	157	6	177	0	.	91
COPRS	55352	bcgsc.ca	37	17	30180011	30180011	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_018405	exon3	c.C205A	p.R69R	.	.	72	4	40	1	.	.
COPS4	51138	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	83971134	83971134	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	COPS4	NM_016129	exon4	c.A407G	p.Q136R	.	.	36	8	37	0	.	226
COPS5	10987	bcgsc.ca	37	8	67971652	67971652	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	COPS5	NM_006837	exon2	c.T172C	p.S58P	.	.	92	5	62	0	.	660
COX1	5742	bcgsc.ca	37	MT	6257	6257	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	ENST00000361624	exon1	c.G354A	p.V118V	.	.	212	8	461	1	.	.
COX1	5742	broad.mit.edu;bcgsc.ca	37	MT	6951	6951	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	ENST00000361624	exon1	c.G1048A	p.V350I	.	.	205	179	391	0	.	.
CPA2	1358	bcgsc.ca	37	7	129919445	129919445	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CPA2	NM_001869	exon9	c.G930T	p.Q310H	.	.	87	4	49	0	.	91
CPB2	1361	ucsc.edu;bcgsc.ca	37	13	46652945	46652945	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CPB2	NM_001872	exon5	c.A476G	p.Y159C	.	.	30	4	37	0	.	92
CPNE3	8895	ucsc.edu;bcgsc.ca	37	8	87563426	87563426	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CPNE3	NM_003909	exon14	c.C1084A	p.P362T	.	.	44	4	31	0	.	117
CPQ	10404	bcgsc.ca	37	8	97892110	97892110	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_016134	exon4	c.G726A	p.M242I	.	.	98	4	61	0	.	.
CPSF2	53981	bcgsc.ca	37	14	92621495	92621495	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CPSF2	NM_017437	exon11	c.G1270A	p.D424N	.	.	61	4	54	0	.	92
CPT1A	1374	ucsc.edu;bcgsc.ca	37	11	68527778	68527778	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CPT1A	NM_001876	exon17	c.C2057T	p.T686I	.	.	46	4	47	0	.	149
CR1	1378	bcgsc.ca	37	1	207793253	207793253	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CR1	NM_000651	exon43	c.G7095A	p.M2365I	.	.	56	4	46	0	.	93
CRBN	51185	bcgsc.ca	37	3	3209322	3209322	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CRBN	NM_016302	exon5	c.A683G	p.Q228R	.	.	56	4	74	0	.	91
CREBL2	1389	bcgsc.ca	37	12	12790614	12790614	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CREBL2	NM_001310	exon3	c.C324A	p.T108T	.	.	84	4	90	0	.	90
CREG2	200407	bcgsc.ca	37	2	101967520	101967520	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CREG2	NM_153836	exon4	c.G738T	p.M246I	.	.	53	4	42	0	.	91
CRISP1	167	bcgsc.ca	37	6	49825087	49825087	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CRISP1	NM_001205220	exon2	c.G27T	p.L9F	.	.	175	6	201	0	.	90
CRNKL1	51340	bcgsc.ca	37	20	20028994	20028994	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CRNKL1	NM_016652	exon5	c.C931A	p.Q311K	.	.	142	6	163	0	.	137
CRYAB	1410	bcgsc.ca	37	11	111779613	111779613	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CRYAB	NM_001885	exon3	c.T403C	p.S135P	.	.	65	4	73	0	.	514
CRYBG3	131544	bcgsc.ca	37	3	97634489	97634489	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CRYBG3	NM_153605	exon17	c.A8150G	p.N2717S	.	.	81	4	73	0	.	68
CSE1L	1434	bcgsc.ca	37	20	47683734	47683734	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CSE1L	NM_001256135	exon6	c.C484T	p.H162Y	.	.	149	6	143	0	.	290
CSMD3	114788	ucsc.edu	37	8	113569099	113569099	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CSMD3	NM_198123	exon25	c.C4127A	p.T1376N	.	.	42	4	27	0	.	1132
CTAGE1	64693	bcgsc.ca	37	18	19995650	19995650	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CTAGE1	NM_172241	exon1	c.G2125T	p.V709F	.	.	82	4	99	0	.	1
CTPS1	1503	bcgsc.ca	37	1	41474485	41474485	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001905	exon16	c.A1469G	p.K490R	.	.	83	4	106	0	.	.
CWF19L2	143884	bcgsc.ca	37	11	107207306	107207306	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CWF19L2	NM_152434	exon15	c.A2336G	p.D779G	.	.	100	5	147	0	.	68
CXorf22	170063	bcgsc.ca	37	X	35971829	35971829	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CXorf22	NM_152632	exon7	c.C1167A	p.T389T	.	.	137	6	165	1	.	131
CYBASC3	220002	ucsc.edu;bcgsc.ca	37	11	61120553	61120553	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CYBASC3	NM_001161454	exon6	c.T503C	p.L168P	.	.	48	4	41	0	.	90
CYBB	1536	bcgsc.ca	37	X	37651304	37651304	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CYBB	NM_000397	exon4	c.T329C	p.L110P	.	.	59	4	77	0	.	130
CYFIP1	23191	ucsc.edu;bcgsc.ca	37	15	22956491	22956491	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CYFIP1	NM_014608	exon16	c.C1728A	p.S576S	.	.	47	4	39	0	.	99
CYLC1	1538	bcgsc.ca	37	X	83128816	83128816	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CYLC1	NM_021118	exon4	c.C1100A	p.P367Q	.	.	116	5	113	1	.	112
CYLD	1540	bcgsc.ca	37	16	50813908	50813908	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CYLD	NM_015247	exon10	c.A1471G	p.I491V	.	.	60	4	60	0	.	2444
CYP11B1	1584	bcgsc.ca	37	8	143955811	143955811	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CYP11B1	NM_000497	exon9	c.T1490C	p.L497P	.	.	68	4	88	1	.	94
CYP2A7	1549	bcgsc.ca	37	19	41384798	41384798	+	Missense_Mutation	SNP	G	G	A	rs146496348	byfrequency;alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CYP2A7	NM_000764	exon5	c.C698T	p.P233L	.	.	118	5	95	0	G|1.000;T|0.000	93
CYP2C8	1558	bcgsc.ca	37	10	96828962	96828962	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CYP2C8	NM_001198854	exon1	c.T17C	p.I6T	.	.	50	4	38	0	.	90
CYP3A43	64816	bcgsc.ca	37	7	99425752	99425752	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CYP3A43	NM_057096	exon1	c.C14A	p.P5Q	.	.	76	4	67	0	.	92
CYP3A7	1551	bcgsc.ca	37	7	99306705	99306705	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CYP3A7	NM_000765	exon11	c.T1206C	p.H402H	.	.	116	5	136	0	.	91
CYP51A1	1595	bcgsc.ca	37	7	91747858	91747858	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	CYP51A1	NM_000786	exon8	c.G1158T	p.M386I	.	.	75	4	79	0	.	90
CYP7B1	9420	bcgsc.ca	37	8	65509444	65509444	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	CYP7B1,NS,carcinoma,+1	CYP7B1	NM_004820	exon6	c.A1276G	p.T426A	.	.	66	4	63	0	.	93
DAB2	1601	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	5	39376177	39376177	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DAB2	NM_001343	exon13	c.C2169A	p.S723S	.	.	77	34	66	0	.	227
DAK	26007	ucsc.edu;bcgsc.ca	37	11	61113369	61113369	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DAK	NM_015533	exon17	c.G1526T	p.W509L	.	.	37	4	39	0	.	115
DAP3	7818	bcgsc.ca	37	1	155695786	155695786	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DAP3	NM_033657	exon6	c.T448C	p.W150R	.	.	191	7	134	0	.	228
DCC	1630	bcgsc.ca	37	18	50278587	50278587	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DCC	NM_005215	exon2	c.G255A	p.M85I	.	.	46	4	45	0	.	225
DCC	1630	ucsc.edu	37	18	51013225	51013225	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DCC	NM_005215	exon26	c.C3795A	p.L1265L	.	.	47	4	71	0	.	225
DCHS1	8642	broad.mit.edu;mdanderson.org	37	11	6654287	6654287	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DCHS1	NM_003737	exon6	c.G2456T	p.G819V	.	.	24	6	18	0	.	73
DCHS2	54798	bcgsc.ca	37	4	155156171	155156171	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DCHS2	NM_017639	exon25	c.G8268T	p.Q2756H	.	.	68	4	69	0	.	94
DCLRE1A	9937	bcgsc.ca	37	10	115610195	115610195	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DCLRE1A	NM_014881	exon2	c.G669T	p.S223S	.	.	82	4	86	0	.	228
DDB1	1642	bcgsc.ca	37	11	61090528	61090528	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DDB1	NM_001923	exon8	c.T960C	p.G320G	.	.	69	4	50	0	.	661
DDC	1644	ucsc.edu;bcgsc.ca	37	7	50607706	50607706	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DDC	NM_001082971	exon3	c.C222A	p.P74P	.	.	41	4	45	0	.	92
DDX52	11056	bcgsc.ca	37	17	35986002	35986002	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DDX52	NM_007010	exon8	c.G1075T	p.D359Y	.	.	93	4	92	0	.	228
DDX60	55601	bcgsc.ca	37	4	169146828	169146828	+	Splice_Site	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DDX60	NM_017631	exon35	c.4534-1G>T	.	.	.	52	4	63	1	.	25
DDX60	55601	bcgsc.ca	37	4	169227536	169227536	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DDX60	NM_017631	exon5	c.C600A	p.S200S	.	.	24	4	20	0	.	25
DENND1B	163486	bcgsc.ca	37	1	197522125	197522125	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DENND1B	NM_144977	exon16	c.C1267A	p.P423T	.	.	60	4	36	0	.	44
DENND2C	163259	bcgsc.ca	37	1	115138453	115138453	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DENND2C	NM_001256404	exon17	c.G2325T	p.E775D	.	.	80	4	62	0	.	229
DEPDC5	9681	bcgsc.ca	37	22	32289699	32289699	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DEPDC5	NM_001242896	exon39	c.C4165A	p.H1389N	.	.	67	4	50	0	.	519
DEPDC5	9681	ucsc.edu;bcgsc.ca	37	22	32211144	32211144	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DEPDC5	NM_001242897	exon21	c.C1612A	p.P538T	.	.	48	5	48	0	.	519
DFNA5	1687	bcgsc.ca	37	7	24789388	24789388	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DFNA5	NM_001127453	exon2	c.T6C	p.F2F	.	.	64	4	50	0	.	91
DIS3L2	129563	bcgsc.ca	37	2	233028327	233028327	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DIS3L2	NM_152383	exon9	c.A1109G	p.K370R	.	.	49	4	46	0	.	136
DISP1	84976	bcgsc.ca	37	1	223176456	223176456	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DISP1	NM_032890	exon10	c.G1717T	p.D573Y	.	.	143	5	125	1	.	68
DLGAP5	9787	bcgsc.ca	37	14	55655795	55655795	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DLGAP5	NM_014750	exon2	c.A103G	p.R35G	.	.	123	5	159	0	.	92
DMD	1756	bcgsc.ca	37	X	32632531	32632531	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DMD	NM_004006	exon12	c.G1371T	p.L457L	.	.	131	5	172	0	.	265
DMTF1	9988	bcgsc.ca	37	7	86824048	86824048	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DMTF1	NM_001142327	exon17	c.G2077T	p.D693Y	.	.	63	4	50	0	.	91
DMXL1	1657	bcgsc.ca	37	5	118482553	118482553	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DMXL1	NM_005509	exon16	c.C2591A	p.S864Y	.	.	100	4	69	0	.	92
DNAH11	8701	bcgsc.ca	37	7	21599226	21599226	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DNAH11	.	.	.	.	.	.	69	4	59	0	.	146
DNAH17	8632	bcgsc.ca	37	17	76501401	76501401	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DNAH17	NM_173628	exon31	c.G4930T	p.D1644Y	.	.	92	5	67	2	.	142
DNAH3	55567	bcgsc.ca	37	16	21122959	21122959	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DNAH3	NM_017539	exon14	c.A2087G	p.D696G	.	.	73	4	73	0	.	167
DNAH3	55567	bcgsc.ca	37	16	21136614	21136614	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DNAH3	NM_017539	exon9	c.A1286G	p.D429G	.	.	46	4	57	0	.	167
DNAH7	56171	bcgsc.ca	37	2	196661359	196661359	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DNAH7	NM_018897	exon56	c.G10456A	p.V3486I	.	.	61	4	39	0	.	102
DNAH8	1769	bcgsc.ca	37	6	38831758	38831758	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DNAH8	NM_001206927	exon45	c.A6420G	p.K2140K	.	.	110	5	110	0	.	615
DNAH8	1769	bcgsc.ca	37	6	38862536	38862536	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DNAH8	NM_001206927	exon59	c.C8643A	p.S2881S	.	.	56	4	41	0	.	615
DNAH9	1770	ucsc.edu;bcgsc.ca	37	17	11593141	11593141	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DNAH9	NM_001372	exon20	c.G4002T	p.L1334F	.	.	47	4	46	0	.	168
DNAI2	64446	bcgsc.ca	37	17	72283154	72283154	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DNAI2	NM_001172810	exon4	c.C384T	p.D128D	.	.	69	4	37	0	.	92
DNAJC14	85406	bcgsc.ca	37	12	56216884	56216884	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DNAJC14	NM_032364	exon4	c.T1604C	p.M535T	.	.	63	4	45	0	.	229
DNAJC24	120526	bcgsc.ca	37	11	31436462	31436462	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DNAJC24	NM_181706	exon3	c.A216G	p.E72E	.	.	51	4	59	0	.	153
DNASE1L3	1776	bcgsc.ca	37	3	58183593	58183593	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DNASE1L3	NM_004944	exon6	c.A659G	p.Q220R	.	.	84	6	104	0	.	153
DNER	92737	bcgsc.ca	37	2	230341918	230341918	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DNER	NM_139072	exon7	c.C1199T	p.P400L	.	.	65	4	46	0	.	524
DOCK10	55619	bcgsc.ca	37	2	225635298	225635298	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DOCK10	NM_014689	exon54	c.C6269A	p.P2090H	.	.	113	5	74	0	.	92
DOCK10	55619	ucsc.edu;bcgsc.ca	37	2	225634958	225634958	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DOCK10	NM_014689	exon55	c.C6414A	p.L2138L	.	.	46	4	34	0	.	92
DOCK11	139818	bcgsc.ca	37	X	117732023	117732023	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DOCK11	NM_144658	exon22	c.G2416T	p.G806C	.	.	148	6	153	0	.	93
DOCK3	1795	bcgsc.ca	37	3	51370454	51370454	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DOCK3	NM_004947	exon34	c.C3511A	p.P1171T	.	.	145	7	143	0	.	22
DOCK6	57572	bcgsc.ca	37	19	11347545	11347545	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DOCK6	NM_020812	exon19	c.C2084T	p.P695L	.	.	18	3	25	0	.	93
DPH1	1801	bcgsc.ca	37	17	1937074	1937074	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DPH1	NM_001383	exon3	c.G231T	p.V77V	.	.	42	5	59	0	.	181
DPP3	10072	ucsc.edu;bcgsc.ca	37	11	66262718	66262718	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DPP3	NM_130443	exon13	c.C1431A	p.I477I	.	.	25	4	33	0	.	46
DPP6	1804	ucsc.edu;bcgsc.ca	37	7	154172081	154172081	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DPP6	NM_130797	exon3	c.A416G	p.E139G	.	.	38	4	37	0	.	652
DSG3	1830	bcgsc.ca	37	18	29055664	29055664	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DSG3	NM_001944	exon16	c.T2441C	p.L814S	.	.	54	4	52	0	.	98
DTHD1	401124	bcgsc.ca	37	4	36292054	36292054	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DTHD1	NM_001170700	exon2	c.C572A	p.P191Q	.	.	97	6	78	0	.	46
DTX2	113878	bcgsc.ca	37	7	76132764	76132764	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DTX2	NM_001102594	exon9	c.T1411C	p.S471P	.	.	57	4	60	0	.	524
DYDC2	84332	bcgsc.ca	37	10	82122318	82122318	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DYDC2	NM_001270042	exon2	c.A161G	p.Y54C	.	.	66	4	59	0	.	90
DYM	54808	bcgsc.ca	37	18	46917990	46917990	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DYM	NM_017653	exon3	c.G166T	p.A56S	.	.	163	6	158	0	.	226
DYNC1H1	1778	bcgsc.ca	37	14	102466681	102466681	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DYNC1H1	NM_001376	exon18	c.G4019T	p.W1340L	.	.	61	4	51	0	.	98
DYNC1LI1	51143	bcgsc.ca	37	3	32574491	32574491	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DYNC1LI1	NM_016141	exon8	c.C1067T	p.P356L	.	.	74	6	54	0	.	91
DYNLL1	8655	bcgsc.ca	37	12	120934238	120934238	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DYNLL1	NM_001037494	exon2	c.A14G	p.K5R	.	.	63	4	55	0	.	90
DYRK1A	1859	bcgsc.ca	37	21	38865434	38865434	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	DYRK1A	NM_001396	exon7	c.C1067T	p.T356I	.	.	62	4	93	0	.	792
EAF2	55840	ucsc.edu	37	3	121554209	121554209	+	Missense_Mutation	SNP	A	A	G	rs151186324	byfrequency	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	EAF2	NM_018456	exon1	c.A77G	p.Q26R	.	.	45	4	39	0	A|0.999;G|0.001	90
EBF1	1879	bcgsc.ca	37	5	158522671	158522671	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	EBF1	NM_024007	exon4	c.A368G	p.E123G	.	.	58	4	54	0	.	92
ECE1	1889	bcgsc.ca	37	1	21599261	21599261	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ECE1	NM_001397	exon4	c.G424A	p.G142S	.	.	111	7	128	0	.	93
EDEM3	80267	bcgsc.ca	37	1	184677401	184677401	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	EDEM3	NM_025191	exon17	c.A1923G	p.K641K	.	.	139	5	116	0	.	91
EEA1	8411	bcgsc.ca	37	12	93205133	93205133	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	EEA1	NM_003566	exon17	c.G2121A	p.L707L	.	.	73	4	79	0	.	229
EEF2	1938	bcgsc.ca	37	19	3980669	3980669	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	EEF2	NM_001961	exon9	c.T1189A	p.Y397N	.	.	55	4	34	0	.	90
EFEMP1	2202	bcgsc.ca	37	2	56103821	56103821	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	EFEMP1	NM_001039349	exon7	c.G817T	p.G273C	.	.	165	6	138	1	.	520
EFHC2	80258	bcgsc.ca	37	X	44091872	44091872	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	EFHC2	NM_025184	exon10	c.A1475G	p.Q492R	.	.	127	5	113	0	.	135
EGR2	1959	ucsc.edu;bcgsc.ca	37	10	64575691	64575691	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	EGR2	NM_000399	exon1	c.C99T	p.A33A	.	.	47	4	32	0	.	92
EIF3J	8669	bcgsc.ca	37	15	44849750	44849750	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	EIF3J	NM_003758	exon6	c.A473G	p.E158G	.	.	61	4	41	0	.	68
EIF4G2	1982	ucsc.edu;bcgsc.ca	37	11	10828411	10828411	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	EIF4G2	NM_001042559	exon3	c.A63G	p.G21G	.	.	45	4	39	0	.	91
ELAVL2	1993	bcgsc.ca	37	9	23762176	23762176	+	Silent	SNP	G	G	T	rs73654364	byfrequency;alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ELAVL2	NM_001171195	exon2	c.C57A	p.T19T	.	.	131	5	156	1	G|0.963;A|0.037	516
ELFN1	392617	broad.mit.edu;ucsc.edu;bcgsc.ca	37	7	1784476	1784476	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001128636	exon2	c.C244T	p.R82C	.	.	55	9	65	0	.	.
ELMO1	9844	bcgsc.ca	37	7	36910034	36910034	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ELMO1	NM_014800	exon20	c.T1869C	p.P623P	.	.	77	4	91	0	.	96
EML4	27436	bcgsc.ca	37	2	42483656	42483656	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	EML4	NM_001145076	exon3	c.G224T	p.R75L	.	.	140	5	105	0	.	3734
EML4	27436	bcgsc.ca	37	2	42556992	42556992	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	EML4	NM_019063	exon23	c.T2591C	p.L864P	.	.	62	4	40	0	.	3734
EML5	161436	broad.mit.edu;bcgsc.ca	37	14	89124556	89124556	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	EML5	NM_183387	exon26	c.C3852A	p.S1284S	.	.	125	7	96	1	.	93
ENC1	8507	bcgsc.ca	37	5	73931434	73931434	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ENC1	NM_003633	exon2	c.A877G	p.T293A	.	.	113	5	63	0	.	228
ENO4	387712	bcgsc.ca	37	10	118633652	118633652	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ENO4	NM_001242699	exon10	c.T1281C	p.Y427Y	.	.	86	4	99	0	.	69
ENPP1	5167	bcgsc.ca	37	6	132189234	132189234	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ENPP1	NM_006208	exon12	c.G1241T	p.R414I	.	.	99	4	80	0	.	95
ENPP5	59084	bcgsc.ca	37	6	46135357	46135357	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ENPP5	NM_021572	exon2	c.T643C	p.L215L	.	.	68	4	66	1	.	90
EOMES	8320	bcgsc.ca	37	3	27758763	27758763	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	EOMES	NM_005442	exon6	c.A1859G	p.E620G	.	.	90	6	91	0	.	156
EP400	57634	ucsc.edu	37	12	132551330	132551330	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	EP400	NM_015409	exon49	c.C8565T	p.P2855P	.	.	44	4	51	0	.	520
EPB41L1	2036	bcgsc.ca	37	20	34776364	34776364	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	EPB41L1	NM_001258329	exon10	c.G969T	p.K323N	.	.	62	4	62	0	.	93
EPC1	80314	bcgsc.ca	37	10	32576027	32576027	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	EPC1	NM_001272004	exon7	c.A1151G	p.Q384R	.	.	70	4	73	0	.	93
EPC2	26122	bcgsc.ca	37	2	149528655	149528655	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	EPC2	NM_015630	exon10	c.G1419T	p.L473L	.	.	108	5	89	0	.	137
EPG5	57724	bcgsc.ca	37	18	43532593	43532593	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	EPG5	NM_020964	exon3	c.A1025T	p.Q342L	.	.	88	4	65	0	.	580
EPHA7	2045	bcgsc.ca	37	6	94120852	94120852	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	EPHA7	NM_004440	exon3	c.C199A	p.P67T	.	.	47	4	48	0	.	1453
EPM2A	7957	bcgsc.ca	37	6	146007322	146007322	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	EPM2A	NM_005670	exon2	c.G412A	p.E138K	.	.	76	4	63	0	.	415
EPS15	2060	bcgsc.ca	37	1	51864742	51864742	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	EPS15	NM_001981	exon20	c.G2014A	p.D672N	.	.	71	4	52	0	.	1082
ERBB2IP	55914	bcgsc.ca	37	5	65350423	65350423	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ERBB2IP	NM_001253699	exon21	c.T3277C	p.S1093P	.	.	80	5	38	0	.	653
ERCC3	2071	bcgsc.ca	37	2	128036826	128036826	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ERCC3	NM_000122	exon10	c.T1653C	p.H551H	.	.	116	5	95	0	.	723
ERCC6L2	375748	bcgsc.ca	37	9	98690418	98690418	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001010895	exon10	c.T1624C	p.S542P	.	.	91	5	98	0	.	.
ERN1	2081	bcgsc.ca	37	17	62175560	62175560	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ERN1	NM_001433	exon2	c.G96A	p.L32L	.	.	65	4	55	0	.	784
ESRRG	2104	bcgsc.ca	37	1	216692584	216692584	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ESRRG	NM_001243518	exon7	c.G1078T	p.A360S	.	.	103	5	71	0	.	187
ETNK1	55500	bcgsc.ca	37	12	22814042	22814042	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ETNK1	NM_018638	exon4	c.G870T	p.M290I	.	.	82	4	68	0	.	115
ETS2	2114	ucsc.edu;bcgsc.ca	37	21	40186314	40186314	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ETS2	NM_001256295	exon5	c.A722G	p.K241R	.	.	43	4	32	0	.	849
ETV6	2120	bcgsc.ca	37	12	12006397	12006397	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ETV6	NM_001987	exon4	c.A365G	p.K122R	.	.	80	4	81	0	.	1674
EXOC1	55763	bcgsc.ca	37	4	56763047	56763047	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	EXOC1	NM_018261	exon16	c.C2118A	p.I706I	.	.	80	4	81	0	.	950
EXOC4	60412	ucsc.edu;bcgsc.ca	37	7	133689750	133689750	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	EXOC4	NM_021807	exon16	c.C2434T	p.P812S	.	.	41	4	43	0	.	159
EXOC6	54536	bcgsc.ca	37	10	94659384	94659384	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	EXOC6	NM_019053	exon5	c.A441G	p.E147E	.	.	82	4	85	0	.	91
EXPH5	23086	bcgsc.ca	37	11	108384861	108384861	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	EXPH5	NM_015065	exon6	c.C1373A	p.T458N	.	.	68	5	56	0	.	95
EXTL1	2134	bcgsc.ca	37	1	26358933	26358933	+	Missense_Mutation	SNP	C	C	A	rs140906656	alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	EXTL1	NM_004455	exon7	c.C1388A	p.P463Q	.	.	47	4	56	0	C|1.000;T|0.000	90
EYS	346007	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	65300537	65300537	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	EYS	NM_001142800	exon26	c.T5223C	p.D1741D	.	.	125	21	128	0	.	660
FAAH2	158584	bcgsc.ca	37	X	57458356	57458356	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FAAH2	NM_174912	exon8	c.G1002T	p.V334V	.	.	176	7	197	1	.	133
FAM120A	23196	bcgsc.ca	37	9	96233450	96233450	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FAM120A	NM_014612	exon2	c.C502A	p.Q168K	.	.	125	6	113	0	.	90
FAM120A	23196	bcgsc.ca	37	9	96323389	96323389	+	Splice_Site	SNP	A	A	G	rs112187736	bycluster	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FAM120A	NM_014612	exon16	c.2807-2A>G	.	.	.	70	4	61	0	T|1.000	90
FAM129B	64855	ucsc.edu;bcgsc.ca	37	9	130279192	130279192	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FAM129B	NM_022833	exon8	c.G917A	p.R306Q	.	.	37	4	36	0	.	68
FAM13A	10144	bcgsc.ca	37	4	89649770	89649770	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FAM13A	NM_014883	exon24	c.T2986C	p.Y996H	.	.	59	4	52	0	.	70
FAM163A	148753	ucsc.edu	37	1	179783266	179783266	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FAM163A	NM_173509	exon5	c.G446A	p.W149X	.	.	40	4	26	0	.	91
FAM171A1	221061	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	15255747	15255747	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FAM171A1	NM_001010924	exon8	c.C1840T	p.L614L	.	.	68	13	78	0	.	138
FAM175B	23172	bcgsc.ca	37	10	126490427	126490427	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FAM175B	NM_032182	exon1	c.T29C	p.F10S	.	.	51	4	42	0	.	186
FAM178A	55719	bcgsc.ca	37	10	102678153	102678153	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001136123	exon4	c.C928A	p.L310I	.	.	65	4	40	0	.	.
FAM188B	84182	ucsc.edu	37	7	30830913	30830913	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FAM188B	NM_032222	exon5	c.T796C	p.S266P	.	.	51	4	40	0	.	90
FAM194B	220081	bcgsc.ca	37	13	46115806	46115806	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FAM194B	NM_182542	exon15	c.C1882T	p.P628S	.	.	62	4	83	0	.	68
FAM208B	54906	bcgsc.ca	37	10	5790952	5790952	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_017782	exon15	c.C5568A	p.T1856T	.	.	54	4	55	0	.	.
FAM216B	144809	ucsc.edu;bcgsc.ca	37	13	43360911	43360911	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_182508	exon3	c.G112A	p.G38R	.	.	38	4	33	0	.	.
FAM222B	55731	ucsc.edu	37	17	27093667	27093667	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_018182	exon3	c.G19T	p.G7W	.	.	49	5	24	0	.	.
FAM26F	441168	bcgsc.ca	37	6	116784787	116784787	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FAM26F	NM_001010919	exon3	c.T867A	p.G289G	.	.	105	5	125	0	.	68
FAM35A	54537	bcgsc.ca	37	10	88911530	88911530	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FAM35A	NM_019054	exon3	c.A419G	p.K140R	.	.	144	5	167	0	.	94
FAM73B	84895	ucsc.edu;bcgsc.ca	37	9	131832221	131832221	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FAM73B	NM_032809	exon15	c.G1552T	p.A518S	.	.	48	4	32	0	.	91
FAM98A	25940	bcgsc.ca	37	2	33817245	33817245	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FAM98A	NM_015475	exon3	c.G239T	p.S80I	.	.	80	5	52	0	.	91
FAM9A	171482	bcgsc.ca	37	X	8763429	8763429	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FAM9A	NM_174951	exon7	c.T521C	p.L174S	.	.	108	5	120	0	.	130
FANCL	55120	bcgsc.ca	37	2	58431341	58431341	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FANCL	NM_018062	exon6	c.G395T	p.C132F	.	.	86	4	54	0	.	661
FANCM	57697	bcgsc.ca	37	14	45636172	45636172	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FANCM	NM_020937	exon11	c.C1808A	p.S603Y	.	.	85	4	85	0	.	569
FANCM	57697	bcgsc.ca	37	14	45667986	45667986	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FANCM	NM_020937	exon22	c.A5856G	p.E1952E	.	.	80	4	71	0	.	569
FARP1	10160	bcgsc.ca	37	13	98865637	98865637	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FARP1	NM_001001715	exon2	c.G141A	p.L47L	.	.	58	4	46	0	.	290
FARP2	9855	ucsc.edu	37	2	242430981	242430981	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FARP2	NM_014808	exon24	c.G2674A	p.G892S	.	.	41	4	18	0	.	93
FASTKD2	22868	bcgsc.ca	37	2	207634862	207634862	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FASTKD2	NM_001136193	exon3	c.T825C	p.T275T	.	.	113	5	96	0	.	118
FASTKD3	79072	bcgsc.ca	37	5	7866870	7866870	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FASTKD3	NM_024091	exon2	c.T1327C	p.F443L	.	.	113	5	98	0	.	156
FAT1	2195	bcgsc.ca	37	4	187542046	187542046	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FAT1	NM_005245	exon10	c.C5694A	p.V1898V	.	.	93	5	90	0	.	34
FAT1	2195	bcgsc.ca	37	4	187630206	187630206	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FAT1	NM_005245	exon2	c.C776A	p.A259E	.	.	57	4	44	0	.	34
FAT4	79633	bcgsc.ca	37	4	126408567	126408567	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FAT4	NM_024582	exon16	c.C12884A	p.P4295H	.	.	77	4	69	0	.	108
FBXO10	26267	bcgsc.ca	37	9	37522916	37522916	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FBXO10	NM_012166	exon7	c.C1836A	p.P612P	.	.	62	5	53	0	.	637
FBXO33	254170	bcgsc.ca	37	14	39868839	39868839	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FBXO33	NM_203301	exon4	c.G1549A	p.V517I	.	.	86	4	86	0	.	658
FBXO34	55030	ucsc.edu;bcgsc.ca	37	14	55819116	55819116	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FBXO34	NM_017943	exon2	c.C2008A	p.R670R	.	.	45	4	30	0	.	228
FBXO48	554251	bcgsc.ca	37	2	68692270	68692270	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FBXO48	NM_001024680	exon3	c.A8G	p.K3R	.	.	52	4	51	0	.	90
FBXW11	23291	bcgsc.ca	37	5	171318554	171318554	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	FBXW11,NS,carcinoma,0	FBXW11	NM_012300	exon6	c.C706A	p.R236S	.	.	132	5	105	0	.	272
FCHO2	115548	bcgsc.ca	37	5	72370611	72370611	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FCHO2	NM_138782	exon20	c.A1622G	p.D541G	.	.	105	5	57	0	.	23
FCN2	2220	bcgsc.ca	37	9	137778301	137778301	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FCN2	NM_004108	exon7	c.G585A	p.L195L	.	.	95	5	83	0	.	153
FCRL2	79368	ucsc.edu	37	1	157739886	157739886	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FCRL2	NM_030764	exon4	c.G365A	p.G122D	.	.	47	4	21	0	.	92
FCRL5	83416	bcgsc.ca	37	1	157512704	157512704	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FCRL5	NM_031281	exon6	c.A1068G	p.T356T	.	.	96	6	75	0	.	156
FECH	2235	bcgsc.ca	37	18	55218589	55218589	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FECH	NM_001012515	exon10	c.C1113A	p.I371I	.	.	66	4	67	0	.	90
FGD4	121512	bcgsc.ca	37	12	32760986	32760986	+	Silent	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FGD4	NM_139241	exon8	c.A1089T	p.L363L	.	.	138	6	116	0	.	229
FGFR3	2261	bcgsc.ca	37	4	1807340	1807340	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FGFR3	NM_001163213	exon12	c.A1595G	p.K532R	.	.	64	4	71	0	.	9542
FHDC1	85462	bcgsc.ca	37	4	153897445	153897445	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FHDC1	NM_033393	exon11	c.A3002G	p.K1001R	.	.	37	5	58	0	.	136
FHOD1	29109	bcgsc.ca	37	16	67281303	67281303	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FHOD1	NM_013241	exon1	c.G11A	p.G4E	.	.	21	4	23	0	.	221
FIG4	9896	mdanderson.org	37	6	110036323	110036323	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FIG4	NM_014845	exon2	c.C109T	p.R37C	.	.	48	8	50	1	.	69
FLG	2312	bcgsc.ca	37	1	152281522	152281522	+	Missense_Mutation	SNP	C	C	A	rs139914712	alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FLG	NM_002016	exon3	c.G5840T	p.W1947L	.	.	186	7	161	1	C|1.000;T|0.000	106
FLJ46066	0	bcgsc.ca	37	3	182178687	182178687	+	RNA	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	.	.	.	.	.	.	69	5	93	0	.	.
FLRT3	23767	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	14306475	14306475	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FLRT3	NM_013281	exon2	c.T1678A	p.S560T	.	.	154	31	146	0	.	91
FMNL2	114793	bcgsc.ca	37	2	153415284	153415284	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FMNL2	NM_052905	exon5	c.C390T	p.N130N	.	.	69	5	46	0	.	516
FMNL2	114793	bcgsc.ca	37	2	153483038	153483038	+	Splice_Site	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FMNL2	NM_052905	exon17	c.1963-1G>T	.	.	.	110	6	106	0	.	516
FNBP4	23360	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	47745708	47745708	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FNBP4	NM_015308	exon14	c.C2336T	p.T779I	.	.	52	10	54	0	.	91
FNDC4	64838	bcgsc.ca	37	2	27716824	27716824	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FNDC4	NM_022823	exon4	c.C427A	p.R143R	.	.	61	5	65	0	.	90
FNIP1	96459	bcgsc.ca	37	5	131008077	131008077	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FNIP1	NM_133372	exon14	c.T2060C	p.V687A	.	.	114	6	115	0	.	92
FNIP2	57600	ucsc.edu;bcgsc.ca	37	4	159791478	159791478	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FNIP2	NM_020840	exon14	c.A2806G	p.S936G	.	.	38	4	35	0	.	68
FOXA3	3171	bcgsc.ca	37	19	46376204	46376204	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FOXA3	NM_004497	exon2	c.C941A	p.T314K	.	.	59	4	72	0	.	226
FOXO4	4303	bcgsc.ca	37	X	70321085	70321085	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FOXO4	NM_005938	exon2	c.C1005A	p.T335T	.	.	76	5	74	0	.	986
FOXP2	93986	ucsc.edu	37	7	114268630	114268630	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FOXP2	NM_001172767	exon4	c.G369T	p.V123V	.	.	38	4	41	0	.	295
FRA10AC1	118924	bcgsc.ca	37	10	95430592	95430592	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FRA10AC1	NM_145246	exon13	c.G840T	p.E280D	.	.	64	4	67	0	.	90
FRAS1	80144	bcgsc.ca	37	4	79295279	79295279	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FRAS1	NM_001166133	exon25	c.T3025C	p.C1009R	.	.	52	4	53	0	.	68
FREM2	341640	ucsc.edu	37	13	39261753	39261753	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FREM2	NM_207361	exon1	c.C272T	p.P91L	.	.	43	4	32	0	.	100
FRG1B	284802	broad.mit.edu;bcgsc.ca	37	20	29632642	29632642	+	RNA	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FRG1B	.	.	.	.	.	.	918	21	1174	0	.	22
FRMPD4	9758	bcgsc.ca	37	X	12725646	12725646	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FRMPD4	NM_014728	exon13	c.A1346G	p.H449R	.	.	91	4	91	0	.	263
FRMPD4	9758	bcgsc.ca	37	X	12728584	12728584	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FRMPD4	NM_014728	exon14	c.C1537A	p.R513R	.	.	57	4	53	0	.	263
FRYL	285527	bcgsc.ca	37	4	48502175	48502175	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FRYL	NM_015030	exon63	c.T8655C	p.A2885A	.	.	192	6	206	0	.	69
FSCN1	6624	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	5645021	5645021	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FSCN1	NM_003088	exon5	c.C1398T	p.G466G	.	.	50	12	55	0	.	91
FSHR	2492	ucsc.edu	37	2	49191086	49191086	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FSHR	NM_000145	exon10	c.T874C	p.C292R	.	.	43	4	27	0	.	527
FSIP2	401024	bcgsc.ca	37	2	186671712	186671712	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FSIP2	NM_173651	exon17	c.G17946A	p.M5982I	.	.	64	4	50	0	.	90
FTX	100302692	bcgsc.ca	37	X	73406929	73406929	+	RNA	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	.	.	.	.	.	.	131	5	137	1	.	.
FYB	2533	bcgsc.ca	37	5	39202586	39202586	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	FYB	NM_001243093	exon2	c.T507C	p.P169P	.	.	150	6	125	1	.	24
G3BP2	9908	bcgsc.ca	37	4	76570867	76570867	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	G3BP2	NM_012297	exon12	c.A1196G	p.E399G	.	.	163	5	142	0	.	153
G3BP2	9908	bcgsc.ca	37	4	76580977	76580977	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	G3BP2	NM_012297	exon6	c.G520A	p.G174S	.	.	129	6	104	1	.	153
GABBR1	2550	ucsc.edu	37	6	29578772	29578772	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GABBR1	NM_001470	exon14	c.G1637A	p.S546N	.	.	39	4	26	0	.	521
GABRG1	2565	bcgsc.ca	37	4	46060272	46060272	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GABRG1	NM_173536	exon7	c.G878T	p.W293L	.	.	143	6	179	1	.	92
GALC	2581	broad.mit.edu;ucsc.edu;mdanderson.org	37	14	88416215	88416215	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GALC	NM_000153	exon12	c.C1312G	p.L438V	.	.	58	11	65	1	.	90
GANAB	23193	ucsc.edu;bcgsc.ca	37	11	62394348	62394348	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GANAB	NM_198335	exon21	c.C2447T	p.P816L	.	.	35	4	56	1	.	94
GAPDHS	26330	bcgsc.ca	37	19	36027891	36027891	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GAPDHS	NM_014364	exon2	c.G244A	p.G82R	.	.	54	5	39	0	.	226
GATAD1	57798	bcgsc.ca	37	7	92078065	92078065	+	Splice_Site	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GATAD1	NM_021167	exon2	c.250-1G>T	.	.	.	126	5	127	0	.	514
GATS	352954	bcgsc.ca	37	7	99869463	99869463	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GATS	NM_178831	exon1	c.C144A	p.T48T	.	.	100	6	102	0	.	90
GBAS	2631	bcgsc.ca	37	7	56049217	56049217	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GBAS	NM_001483	exon4	c.G330T	p.L110F	.	.	90	5	82	0	.	514
GBE1	2632	bcgsc.ca	37	3	81548302	81548302	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GBE1	NM_000158	exon15	c.2011delT	p.S671fs	.	.	146	24	165	1	.	25
GBP6	163351	bcgsc.ca	37	1	89851020	89851020	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GBP6	NM_198460	exon11	c.C1894T	p.P632S	.	.	51	4	38	0	.	92
GCK	2645	bcgsc.ca	37	7	44190584	44190584	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GCK	NM_033507	exon4	c.T457C	p.F153L	.	.	89	4	69	0	.	416
GCN1L1	10985	bcgsc.ca	37	12	120584908	120584908	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GCN1L1	NM_006836	exon38	c.G4895T	p.R1632L	.	.	76	4	67	0	.	94
GCSAM	257144	bcgsc.ca	37	3	111842308	111842308	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001190259	exon6	c.T537C	p.H179H	.	.	88	5	90	0	.	.
GFM2	84340	bcgsc.ca	37	5	74034181	74034181	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GFM2	NM_032380	exon14	c.A1282G	p.T428A	.	.	166	7	145	0	.	90
GHSR	2693	bcgsc.ca	37	3	172165901	172165901	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GHSR	NM_198407	exon1	c.T303C	p.V101V	.	.	139	5	99	0	.	501
GIGYF1	64599	ucsc.edu	37	7	100284940	100284940	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GIGYF1	NM_022574	exon5	c.A463G	p.S155G	.	.	45	4	48	0	.	136
GIT2	9815	broad.mit.edu;bcgsc.ca	37	12	110390905	110390905	+	Silent	SNP	G	G	T	rs143551429	byfrequency;alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GIT2	NM_001135213	exon14	c.C1240A	p.R414R	.	.	171	7	154	2	G|0.999;A|0.001	226
GK3P	2713	ucsc.edu	37	4	166199405	166199405	+	RNA	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	.	.	.	.	.	.	101	23	120	0	.	.
GLIS2	84662	ucsc.edu	37	16	4385115	4385115	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GLIS2	NM_032575	exon4	c.C577T	p.H193Y	.	.	46	4	42	0	.	90
GLMN	11146	bcgsc.ca	37	1	92712114	92712114	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GLMN	NM_053274	exon19	c.C1758A	p.T586T	.	.	368	9	342	0	.	227
GLO1	2739	bcgsc.ca	37	6	38652249	38652249	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GLO1	NM_006708	exon3	c.T209C	p.L70P	.	.	34	4	36	0	.	227
GMCL1P1	64396	bcgsc.ca	37	5	177613666	177613666	+	RNA	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	.	.	.	.	.	.	80	4	56	0	.	.
GMIP	51291	ucsc.edu	37	19	19748802	19748802	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GMIP	NM_016573	exon10	c.T854C	p.L285P	.	.	58	4	66	0	.	91
GNPAT	8443	bcgsc.ca	37	1	231406743	231406743	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GNPAT	NM_014236	exon10	c.A1519G	p.K507E	.	.	72	4	56	0	.	156
GOPC	57120	bcgsc.ca	37	6	117888078	117888078	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GOPC	NM_020399	exon8	c.A1197G	p.E399E	.	.	70	4	80	0	.	676
GP2	2813	ucsc.edu;bcgsc.ca	37	16	20328667	20328667	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GP2	NM_001007240	exon9	c.C1293T	p.H431H	.	.	41	4	41	0	.	94
GPNMB	10457	bcgsc.ca	37	7	23299738	23299738	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GPNMB	NM_002510	exon5	c.A681G	p.K227K	.	.	54	4	43	0	.	580
GPR126	57211	bcgsc.ca	37	6	142732493	142732493	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GPR126	NM_198569	exon18	c.A2486G	p.D829G	.	.	73	5	74	1	.	91
GPR97	222487	bcgsc.ca	37	16	57714199	57714199	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GPR97	NM_170776	exon7	c.T690C	p.S230S	.	.	75	4	78	0	.	91
GPR98	84059	bcgsc.ca	37	5	89940636	89940636	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GPR98	NM_032119	exon15	c.G2848A	p.G950R	.	.	134	5	143	0	.	103
GPRASP2	114928	bcgsc.ca	37	X	101970777	101970777	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GPRASP2	NM_138437	exon4	c.A980T	p.E327V	.	.	88	5	87	0	.	131
GPRC5D	55507	ucsc.edu	37	12	13102613	13102613	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GPRC5D	NM_018654	exon1	c.C706T	p.Q236X	.	.	32	4	31	0	.	90
GPRIN1	114787	ucsc.edu;bcgsc.ca	37	5	176025338	176025338	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GPRIN1	NM_052899	exon2	c.T1498C	p.L500L	.	.	43	4	37	0	.	92
GPS1	2873	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	80011842	80011842	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GPS1	NM_212492	exon3	c.G345A	p.L115L	.	.	34	8	16	0	.	226
GREB1	9687	bcgsc.ca	37	2	11775440	11775440	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GREB1	NM_014668	exon30	c.C5255A	p.A1752D	.	.	61	4	47	0	.	91
GRID2	2895	bcgsc.ca	37	4	94138028	94138028	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GRID2	NM_001510	exon6	c.G929A	p.C310Y	.	.	55	4	43	0	.	159
GRIK2	2898	bcgsc.ca	37	6	102376409	102376409	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GRIK2	NM_021956	exon13	c.C1987T	p.R663C	.	.	72	4	77	0	.	157
GRIN2B	2904	bcgsc.ca	37	12	14018927	14018927	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GRIN2B	NM_000834	exon2	c.C216T	p.A72A	.	.	67	4	58	0	.	231
GRK6	2870	ucsc.edu	37	5	176861086	176861086	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GRK6	NM_002082	exon9	c.C910A	p.R304R	.	.	35	4	16	0	.	602
GRXCR2	643226	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	145246178	145246178	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GRXCR2	NM_001080516	exon2	c.G450C	p.E150D	.	.	131	30	91	0	.	22
GSE1	23199	hgsc.bcm.edu	37	16	85689985	85689997	+	Frame_Shift_Del	DEL	GCGCGAGCGCGAG	GCGCGAGCGCGAG	-	rs3833833	alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	GCGCGAGCGCGAG	GCGCGAGCGCGAG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_014615	exon7	c.1026_1038del	p.342_346del	.	.	39	13	21	0	.	.
GSK3A	2931	bcgsc.ca	37	19	42736778	42736778	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GSK3A	NM_019884	exon9	c.G1155T	p.E385D	.	.	42	4	53	0	.	981
GSPT2	23708	bcgsc.ca	37	X	51486737	51486737	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GSPT2	NM_018094	exon1	c.C15T	p.S5S	.	.	49	4	63	0	.	228
GUCD1	83606	broad.mit.edu	37	22	24939007	24939007	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_031444	exon6	c.T690C	p.D230D	.	.	58	15	65	2	.	.
GUCY2C	2984	bcgsc.ca	37	12	14772167	14772167	+	Silent	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GUCY2C	NM_004963	exon24	c.T2853A	p.S951S	.	.	61	4	61	0	.	338
GUCY2D	3000	bcgsc.ca	37	17	7916528	7916528	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GUCY2D	NM_000180	exon11	c.T2221C	p.C741R	.	.	64	4	54	1	.	319
GUK1	2987	ucsc.edu;bcgsc.ca	37	1	228336111	228336111	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	GUK1	NM_001159390	exon7	c.A578G	p.D193G	.	.	36	4	28	0	.	115
HABP4	22927	bcgsc.ca	37	9	99220664	99220664	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HABP4	NM_014282	exon2	c.A353G	p.Q118R	.	.	60	5	49	0	.	91
HADHA	3030	bcgsc.ca	37	2	26426949	26426949	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HADHA	NM_000182	exon12	c.A1202G	p.Q401R	.	.	67	4	58	0	.	91
HAO2	51179	bcgsc.ca	37	1	119927602	119927602	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HAO2	NM_001005783	exon5	c.G487T	p.G163C	.	.	60	4	39	0	.	94
HAP1	9001	bcgsc.ca	37	17	39890770	39890770	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HAP1	NM_177977	exon1	c.G117A	p.A39A	.	.	28	4	35	0	.	92
HAUS3	79441	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	2242302	2242302	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HAUS3	NM_024511	exon2	c.A372C	p.Q124H	.	.	124	26	97	1	.	138
HBS1L	10767	bcgsc.ca	37	6	135314921	135314921	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HBS1L	NM_006620	exon8	c.C1058A	p.P353Q	.	.	59	5	63	0	.	92
HDAC8	55869	ucsc.edu	37	X	71715073	71715073	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HDAC8	NM_018486	exon5	c.A483G	p.G161G	.	.	41	4	22	0	.	226
HDLBP	3069	bcgsc.ca	37	2	242174629	242174629	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HDLBP	NM_005336	exon23	c.C3051A	p.I1017I	.	.	39	4	40	0	.	290
HEATR1	55127	bcgsc.ca	37	1	236759327	236759327	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HEATR1	NM_018072	exon7	c.A762T	p.L254F	.	.	72	4	47	0	.	93
HEATR5B	54497	bcgsc.ca	37	2	37217835	37217835	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HEATR5B	NM_019024	exon34	c.T5653C	p.C1885R	.	.	70	5	56	0	.	142
HECTD1	25831	bcgsc.ca	37	14	31602765	31602765	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HECTD1	NM_015382	exon23	c.C3695A	p.S1232Y	.	.	185	7	140	0	.	570
HECTD1	25831	bcgsc.ca	37	14	31626053	31626053	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HECTD1	NM_015382	exon12	c.C1925A	p.P642Q	.	.	139	6	125	0	.	570
HECTD4	283450	bcgsc.ca	37	12	112669379	112669379	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001109662	exon39	c.A5736G	p.T1912T	.	.	51	4	44	0	.	.
HECW1	23072	bcgsc.ca	37	7	43531746	43531746	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HECW1	NM_015052	exon18	c.C3307A	p.R1103R	.	.	124	6	105	0	.	669
HECW2	57520	bcgsc.ca	37	2	197297904	197297904	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HECW2	NM_020760	exon2	c.A244G	p.I82V	.	.	91	5	59	0	.	668
HELB	92797	ucsc.edu;bcgsc.ca	37	12	66725072	66725072	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HELB	NM_033647	exon12	c.A2809G	p.M937V	.	.	34	4	41	1	.	515
HELZ2	85441	ucsc.edu;bcgsc.ca	37	20	62198260	62198260	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001037335	exon7	c.C2451A	p.T817T	.	.	23	4	34	0	.	.
HEMK1	51409	ucsc.edu	37	3	50616273	50616273	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HEMK1	NM_016173	exon8	c.C686A	p.P229H	.	.	26	4	17	0	.	278
HEPHL1	341208	ucsc.edu;bcgsc.ca	37	11	93778947	93778947	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HEPHL1	NM_001098672	exon2	c.A279G	p.K93K	.	.	47	4	59	1	.	71
HERC1	8925	bcgsc.ca	37	15	64005620	64005620	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HERC1	NM_003922	exon23	c.G4395T	p.K1465N	.	.	88	5	69	0	.	666
HERC4	26091	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	69726472	69726472	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HERC4	NM_022079	exon16	c.A1894G	p.I632V	.	.	100	17	120	0	.	659
HESX1	8820	broad.mit.edu;ucsc.edu	37	3	57233897	57233897	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HESX1	NM_003865	exon1	c.C50A	p.S17X	.	.	71	9	71	0	.	227
HFE2	148738	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	145414811	145414811	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HFE2	NM_213653	exon2	c.C30T	p.P10P	.	.	80	22	60	0	.	91
HGF	3082	bcgsc.ca	37	7	81355333	81355333	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HGF	NM_000601	exon9	c.G1041A	p.K347K	.	.	122	5	121	0	.	516
HHLA2	11148	bcgsc.ca	37	3	108074055	108074055	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HHLA2	NM_007072	exon5	c.C512T	p.T171M	.	.	102	5	108	0	.	1
HIPK4	147746	ucsc.edu	37	19	40889976	40889976	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HIPK4	NM_144685	exon2	c.G536A	p.R179H	.	.	39	4	29	0	.	334
HIVEP2	3097	bcgsc.ca	37	6	143091496	143091496	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HIVEP2	NM_006734	exon5	c.C4380A	p.V1460V	.	.	151	6	141	0	.	95
HIVEP2	3097	bcgsc.ca	37	6	143092325	143092325	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HIVEP2	NM_006734	exon5	c.C3551A	p.P1184H	.	.	206	7	192	1	.	95
HK1	3098	bcgsc.ca	37	10	71103703	71103703	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HK1	NM_033498	exon5	c.A196G	p.K66E	.	.	56	5	41	0	.	252
HK3	3101	bcgsc.ca	37	5	176311064	176311064	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HK3	NM_002115	exon14	c.G1929A	p.L643L	.	.	61	5	40	0	.	294
HMCN1	83872	bcgsc.ca	37	1	186008004	186008004	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HMCN1	NM_031935	exon38	c.C5895A	p.T1965T	.	.	200	6	147	1	.	113
HMCN1	83872	broad.mit.edu;bcgsc.ca	37	1	186088390	186088390	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HMCN1	NM_031935	exon78	c.G11916T	p.A3972A	.	.	100	8	72	0	.	113
HMGN2P46	283651	ucsc.edu	37	15	45848076	45848076	+	RNA	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	.	.	.	.	.	.	40	4	34	0	.	.
HNRPLL	92906	bcgsc.ca	37	2	38809058	38809058	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HNRPLL	NM_138394	exon6	c.C799A	p.R267R	.	.	52	4	36	0	.	91
HOXA10	3206	bcgsc.ca	37	7	27211594	27211594	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HOXA10	NM_018951	exon2	c.A1157G	p.N386S	.	.	158	8	125	0	.	68
HOXC6	3223	bcgsc.ca	37	12	54423735	54423735	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HOXC6	NM_004503	exon2	c.C697A	p.Q233K	.	.	83	6	86	0	.	93
HPRT1	3251	bcgsc.ca	37	X	133607407	133607407	+	Missense_Mutation	SNP	G	G	T	rs137852499	alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HPRT1	NM_000194	exon2	c.G46T	p.G16C	.	.	87	6	75	0	.	227
HPS1	3257	bcgsc.ca	37	10	100195482	100195482	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HPS1	NM_000195	exon4	c.C165A	p.I55I	.	.	53	4	57	0	.	91
HPS3	84343	bcgsc.ca	37	3	148880518	148880518	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HPS3	NM_032383	exon13	c.G2334T	p.L778F	.	.	109	7	121	1	.	158
HRH1	3269	ucsc.edu	37	3	11300962	11300962	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HRH1	NM_000861	exon3	c.T239C	p.V80A	.	.	52	4	44	1	.	154
HSD17B14	51171	ucsc.edu;bcgsc.ca	37	19	49316448	49316448	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HSD17B14	NM_016246	exon9	c.C797A	p.P266H	.	.	28	4	51	0	.	90
HSF2	3298	ucsc.edu;bcgsc.ca	37	6	122737443	122737443	+	Splice_Site	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HSF2	NM_004506	exon5	c.531+2T>C	.	.	.	43	4	38	1	.	90
HSPA13	6782	bcgsc.ca	37	21	15746020	15746020	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HSPA13	NM_006948	exon5	c.G1334A	p.G445E	.	.	37	4	33	1	.	226
HTRA3	94031	ucsc.edu;bcgsc.ca	37	4	8293156	8293156	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HTRA3	NM_053044	exon4	c.G768T	p.V256V	.	.	51	6	76	0	.	91
HTT	3064	bcgsc.ca	37	4	3088665	3088665	+	Splice_Site	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HTT	NM_002111	exon2	c.264-1G>T	.	.	.	54	4	49	0	.	281
HTT	3064	bcgsc.ca	37	4	3225731	3225731	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HTT	NM_002111	exon56	c.G7638A	p.K2546K	.	.	78	4	84	0	.	281
HUWE1	10075	bcgsc.ca	37	X	53571557	53571557	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HUWE1	NM_031407	exon72	c.C11215T	p.R3739W	.	.	68	4	38	0	.	280
HUWE1	10075	bcgsc.ca	37	X	53619582	53619582	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HUWE1	NM_031407	exon33	c.T3748C	p.F1250L	.	.	61	4	47	0	.	280
HUWE1	10075	bcgsc.ca	37	X	53654735	53654735	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	HUWE1	NM_031407	exon16	c.T1338C	p.A446A	.	.	84	6	103	0	.	280
ICOS	29851	ucsc.edu	37	2	204822584	204822584	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ICOS	NM_012092	exon4	c.A564G	p.T188T	.	.	46	4	53	1	.	90
IFFO2	126917	bcgsc.ca	37	1	19237936	19237936	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001136265	exon7	c.C1259A	p.T420N	.	.	52	4	72	0	.	.
IFI16	3428	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	158984635	158984635	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	IFI16	NM_001206567	exon2	c.G165C	p.K55N	.	.	270	63	258	0	.	91
IFNAR1	3454	bcgsc.ca	37	21	34715575	34715575	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	IFNAR1	NM_000629	exon4	c.T378C	p.A126A	.	.	60	4	63	0	.	91
IFT52	51098	bcgsc.ca	37	20	42225125	42225125	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	IFT52	NM_016004	exon3	c.T170C	p.I57T	.	.	125	6	138	0	.	92
IFT80	57560	bcgsc.ca	37	3	160025523	160025523	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	IFT80	NM_020800	exon10	c.A1004G	p.D335G	.	.	62	4	47	0	.	522
IFT88	8100	bcgsc.ca	37	13	21175993	21175993	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	IFT88	NM_175605	exon14	c.G989T	p.R330L	.	.	176	6	172	1	.	91
IGF2BP2	10644	bcgsc.ca	37	3	185407372	185407372	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	IGF2BP2	NM_001007225	exon6	c.T448C	p.F150L	.	.	88	5	86	0	.	226
IGF2BP2	10644	bcgsc.ca	37	3	185410502	185410502	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	IGF2BP2	NM_001007225	exon5	c.G389T	p.R130I	.	.	85	4	70	0	.	226
IGFN1	91156	bcgsc.ca	37	1	201182678	201182678	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	IGFN1	NM_001164586	exon12	c.G8657A	p.R2886K	.	.	90	5	89	0	.	71
IGHMBP2	3508	broad.mit.edu	37	11	68704257	68704257	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	IGHMBP2	NM_002180	exon13	c.A2309G	p.D770G	.	.	790	9	34	0	.	90
IGSF10	285313	bcgsc.ca	37	3	151165657	151165657	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	IGSF10	NM_178822	exon4	c.G2112T	p.M704I	.	.	117	5	116	0	.	102
IKBKE	9641	bcgsc.ca	37	1	206646652	206646652	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	IKBKE	NM_001193322	exon3	c.A82G	p.N28D	.	.	97	5	69	0	.	1061
IL12A	3592	bcgsc.ca	37	3	159711532	159711532	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	IL12A	NM_000882	exon6	c.G507T	p.Q169H	.	.	94	5	93	0	.	90
IL17RD	54756	ucsc.edu;bcgsc.ca	37	3	57148813	57148813	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	IL17RD	NM_017563	exon3	c.C217A	p.H73N	.	.	31	5	31	0	.	500
IL19	29949	bcgsc.ca	37	1	207010347	207010347	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	IL19	NM_153758	exon3	c.G303T	p.L101F	.	.	286	7	243	0	.	91
IL1A	3552	bcgsc.ca	37	2	113539366	113539366	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	IL1A	NM_000575	exon4	c.A134G	p.E45G	.	.	77	4	50	0	.	522
IL2RA	3559	bcgsc.ca	37	10	6060034	6060034	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	IL2RA	NM_000417	exon7	c.T776C	p.L259P	.	.	67	6	56	0	.	92
IMPACT	55364	ucsc.edu;bcgsc.ca	37	18	22023067	22023067	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	IMPACT	NM_018439	exon7	c.G545T	p.R182L	.	.	40	4	54	0	.	90
INO80D	54891	bcgsc.ca	37	2	206870061	206870061	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	INO80D	NM_017759	exon11	c.G2115A	p.L705L	.	.	117	5	72	0	.	91
INPP4A	3631	bcgsc.ca	37	2	99152197	99152197	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	INPP4A	NM_004027	exon6	c.C276T	p.T92T	.	.	122	5	104	0	.	227
INPP4B	8821	bcgsc.ca	37	4	143003288	143003288	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	INPP4B	NM_003866	exon26	c.A2538G	p.K846K	.	.	125	6	137	0	.	228
INTS2	57508	bcgsc.ca	37	17	59974902	59974902	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	INTS2	NM_020748	exon11	c.G1446T	p.L482F	.	.	167	8	168	1	.	206
INTS6	26512	bcgsc.ca	37	13	51953604	51953604	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	INTS6	NM_012141	exon11	c.T1380C	p.S460S	.	.	126	6	116	0	.	227
IPO11	51194	ucsc.edu	37	5	61821968	61821968	+	Splice_Site	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	IPO11	NM_016338	exon21	c.1897-1G>T	.	.	.	41	4	24	0	.	227
IPO7	10527	bcgsc.ca	37	11	9459707	9459707	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	IPO7	NM_006391	exon22	c.T2570C	p.V857A	.	.	121	6	123	0	.	271
IPO9	55705	ucsc.edu;bcgsc.ca	37	1	201832722	201832722	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	IPO9	NM_018085	exon14	c.A1615G	p.R539G	.	.	42	5	50	0	.	228
IQCB1	9657	bcgsc.ca	37	3	121547336	121547336	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	IQCB1	NM_001023570	exon4	c.C244A	p.Q82K	.	.	162	5	140	0	.	90
IRS1	3667	bcgsc.ca	37	2	227661301	227661301	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	IRS1	NM_005544	exon1	c.G2154T	p.V718V	.	.	60	4	57	0	.	1272
IRX1	79192	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	3600204	3600204	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	IRX1	NM_024337	exon2	c.C1142A	p.A381E	.	.	98	27	74	0	.	228
ISLR	3671	bcgsc.ca	37	15	74467919	74467919	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ISLR	NM_201526	exon2	c.C720T	p.P240P	.	.	42	4	28	0	.	155
ISM2	145501	bcgsc.ca	37	14	77948759	77948759	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ISM2	NM_199296	exon4	c.A879G	p.E293E	.	.	199	7	229	0	.	91
ITGA2	3673	bcgsc.ca	37	5	52344198	52344198	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ITGA2	NM_002203	exon5	c.T393C	p.C131C	.	.	115	5	81	0	.	226
ITGAX	3687	bcgsc.ca	37	16	31374559	31374559	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ITGAX	NM_000887	exon14	c.T1574C	p.L525P	.	.	59	5	57	0	.	229
ITGB5	3693	ucsc.edu	37	3	124492566	124492566	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ITGB5	NM_002213	exon11	c.C1887T	p.P629P	.	.	55	4	71	0	.	227
ITGB8	3696	bcgsc.ca	37	7	20418829	20418829	+	Missense_Mutation	SNP	C	C	T	rs147908281	byfrequency	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ITGB8	NM_002214	exon4	c.C544T	p.R182C	.	.	53	4	49	0	C|1.000;T|0.000	227
ITLN1	55600	bcgsc.ca	37	1	160850428	160850428	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ITLN1	NM_017625	exon6	c.A635G	p.D212G	.	.	88	7	75	0	.	96
ITPR3	3710	bcgsc.ca	37	6	33654242	33654242	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ITPR3	NM_002224	exon43	c.C5925A	p.L1975L	.	.	53	5	44	0	.	1085
ITPR3	3710	ucsc.edu;bcgsc.ca	37	6	33631612	33631612	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ITPR3	NM_002224	exon11	c.A1103G	p.E368G	.	.	31	4	45	0	.	1085
JAG1	182	bcgsc.ca	37	20	10632859	10632859	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	JAG1	NM_000214	exon7	c.G926T	p.G309V	.	.	63	4	56	0	.	1273
KALRN	8997	bcgsc.ca	37	3	124414986	124414986	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KALRN	NM_001024660	exon54	c.C7583T	p.S2528F	.	.	78	4	90	0	.	738
KALRN	8997	ucsc.edu;bcgsc.ca	37	3	124418823	124418823	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KALRN	NM_001024660	exon56	c.C7939A	p.P2647T	.	.	45	6	44	0	.	738
KANSL1L	151050	bcgsc.ca	37	2	210968831	210968831	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_152519	exon4	c.A1425G	p.K475K	.	.	112	5	91	0	.	.
KAT8	84148	bcgsc.ca	37	16	31141854	31141854	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_182958	exon9	c.C1084A	p.R362S	.	.	43	4	39	0	.	.
KCNA10	3744	broad.mit.edu;bcgsc.ca	37	1	111060014	111060014	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KCNA10	NM_005549	exon1	c.C1396A	p.R466R	.	.	187	8	157	1	.	156
KCNC1	3746	bcgsc.ca	37	11	17801115	17801115	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KCNC1	NM_001112741	exon3	c.C1617T	p.T539T	.	.	48	4	39	0	.	91
KCNIP1	30820	bcgsc.ca	37	5	170149723	170149723	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KCNIP1	NM_001034837	exon6	c.G367T	p.V123L	.	.	152	6	106	0	.	92
KCNQ3	3786	bcgsc.ca	37	8	133153479	133153479	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KCNQ3	NM_004519	exon10	c.A1362G	p.E454E	.	.	76	4	66	0	.	138
KCNQ4	9132	bcgsc.ca	37	1	41285575	41285575	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KCNQ4	NM_004700	exon6	c.A863G	p.D288G	.	.	70	4	60	0	.	90
KCNT2	343450	bcgsc.ca	37	1	196398789	196398789	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KCNT2	NM_198503	exon9	c.G737T	p.G246V	.	.	213	8	164	0	.	159
KDM1B	221656	bcgsc.ca	37	6	18163112	18163112	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KDM1B	NM_153042	exon5	c.G262T	p.G88W	.	.	117	5	116	0	.	91
KDM2A	22992	ucsc.edu;bcgsc.ca	37	11	66975111	66975111	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KDM2A	NM_012308	exon6	c.C438A	p.L146L	.	.	41	4	51	0	.	661
KDM2B	84678	bcgsc.ca	37	12	121868154	121868154	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KDM2B	NM_032590	exon23	c.C3948A	p.A1316A	.	.	71	5	58	0	.	638
KDM2B	84678	bcgsc.ca	37	12	122012465	122012465	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KDM2B	NM_032590	exon4	c.C384T	p.V128V	.	.	52	5	38	0	.	638
KDM3A	55818	bcgsc.ca	37	2	86711117	86711117	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KDM3A	NM_001146688	exon19	c.T2930C	p.M977T	.	.	118	5	105	0	.	291
KDM3B	51780	bcgsc.ca	37	5	137771363	137771363	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KDM3B	NM_016604	exon24	c.C5260T	p.H1754Y	.	.	59	4	34	0	.	542
KDM5B	10765	bcgsc.ca	37	1	202715086	202715086	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	KDM5B,NS,carcinoma,-2	KDM5B	NM_006618	exon16	c.C2223A	p.L741L	.	.	80	4	67	0	.	273
KDM5B	10765	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	202710671	202710671	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KDM5B	NM_006618	exon19	c.G2769A	p.V923V	.	.	46	10	44	0	.	273
KHSRP	8570	bcgsc.ca	37	19	6418074	6418074	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KHSRP	NM_003685	exon10	c.T896C	p.V299A	.	.	58	4	43	0	.	226
KIAA0100	9703	bcgsc.ca	37	17	26966415	26966415	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KIAA0100	NM_014680	exon11	c.C1147A	p.Q383K	.	.	61	5	60	0	.	93
KIAA0146	23514	bcgsc.ca	37	8	48647949	48647949	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KIAA0146	NM_001080394	exon20	c.C2685A	p.T895T	.	.	156	5	128	0	.	68
KIAA0226	9711	bcgsc.ca	37	3	197421423	197421423	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KIAA0226	NM_014687	exon10	c.A1507G	p.I503V	.	.	123	5	113	0	.	22
KIAA0368	23392	ucsc.edu;bcgsc.ca	37	9	114195630	114195630	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KIAA0368	NM_001080398	exon9	c.T1265C	p.F422S	.	.	42	4	29	0	.	68
KIAA0922	23240	bcgsc.ca	37	4	154556605	154556605	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KIAA0922	NM_001131007	exon34	c.G4439A	p.G1480D	.	.	65	4	67	0	.	92
KIAA0947	23379	bcgsc.ca	37	5	5461295	5461295	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KIAA0947	NM_015325	exon13	c.T1848C	p.G616G	.	.	191	7	123	2	.	48
KIAA1107	23285	bcgsc.ca	37	1	92649662	92649662	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_015237	exon9	c.T3840C	p.V1280V	.	.	88	4	55	0	.	.
KIAA1109	84162	bcgsc.ca	37	4	123170645	123170645	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KIAA1109	NM_015312	exon34	c.G5518T	p.G1840W	.	.	88	4	87	0	.	80
KIAA1244	57221	broad.mit.edu	37	6	138615237	138615237	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KIAA1244	NM_020340	exon20	c.C3476T	p.T1159I	.	.	56	4	39	0	.	228
KIAA1279	26128	bcgsc.ca	37	10	70768623	70768623	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KIAA1279	NM_015634	exon5	c.T816C	p.C272C	.	.	93	5	95	0	.	91
KIAA1468	57614	bcgsc.ca	37	18	59878443	59878443	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KIAA1468	NM_020854	exon2	c.A584G	p.D195G	.	.	20	3	39	0	.	158
KIAA1524	57650	bcgsc.ca	37	3	108273303	108273303	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KIAA1524	NM_020890	exon18	c.A2244T	p.L748F	.	.	222	6	177	0	.	92
KIAA1551	55196	bcgsc.ca	37	12	32134500	32134500	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_018169	exon4	c.A611G	p.K204R	.	.	71	5	84	0	.	.
KIAA1551	55196	bcgsc.ca	37	12	32135612	32135612	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_018169	exon4	c.T1723C	p.S575P	.	.	38	4	37	0	.	.
KIAA1551	55196	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	32135645	32135645	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	C12orf35,NS,carcinoma,-1	.	NM_018169	exon4	c.G1756A	p.A586T	.	.	51	9	51	0	.	.
KIAA1715	80856	bcgsc.ca	37	2	176829284	176829284	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KIAA1715	NM_030650	exon7	c.A391G	p.T131A	.	.	71	5	64	0	.	93
KIAA2018	205717	broad.mit.edu	37	3	113375509	113375509	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KIAA2018	NM_001009899	exon7	c.A5020G	p.I1674V	.	.	41	7	42	0	.	93
KIAA2022	340533	bcgsc.ca	37	X	73961340	73961340	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KIAA2022	NM_001008537	exon3	c.G3052A	p.G1018S	.	.	100	4	81	0	.	183
KIDINS220	57498	bcgsc.ca	37	2	8919170	8919170	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KIDINS220	NM_020738	exon19	c.C2470A	p.R824R	.	.	62	4	40	0	.	93
KIF11	3832	bcgsc.ca	37	10	94390108	94390108	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KIF11	NM_004523	exon12	c.A1481G	p.D494G	.	.	64	4	52	0	.	227
KIF15	56992	bcgsc.ca	37	3	44822413	44822413	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KIF15	NM_020242	exon5	c.G360A	p.M120I	.	.	125	5	111	0	.	91
KIF15	56992	bcgsc.ca	37	3	44889481	44889481	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KIF15	NM_020242	exon31	c.C3700A	p.Q1234K	.	.	126	5	108	0	.	91
KIF20B	9585	bcgsc.ca	37	10	91478621	91478621	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KIF20B	NM_016195	exon12	c.G1426A	p.A476T	.	.	117	5	108	0	.	93
KIF21A	55605	bcgsc.ca	37	12	39734087	39734087	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KIF21A	NM_001173464	exon16	c.A2190G	p.K730K	.	.	222	7	244	0	.	97
KIF21A	55605	bcgsc.ca	37	12	39745594	39745594	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KIF21A	NM_001173463	exon11	c.A1658G	p.K553R	.	.	87	5	76	0	.	97
KIF23	9493	bcgsc.ca	37	15	69732797	69732797	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KIF23	NM_138555	exon17	c.C2038A	p.Q680K	.	.	79	5	88	0	.	227
KIF2A	3796	bcgsc.ca	37	5	61654118	61654118	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KIF2A	NM_001098511	exon9	c.G864T	p.M288I	.	.	221	6	159	0	.	228
KIF2C	11004	bcgsc.ca	37	1	45213341	45213341	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KIF2C	NM_006845	exon4	c.C285A	p.S95S	.	.	158	5	117	1	.	228
KIF5C	3800	bcgsc.ca	37	2	149851003	149851003	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KIF5C	NM_004522	exon17	c.A1974G	p.E658E	.	.	108	5	84	0	.	69
KIFC1	3833	ucsc.edu;bcgsc.ca	37	6	33371612	33371612	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KIFC1	NM_002263	exon6	c.T462C	p.R154R	.	.	43	4	42	0	.	90
KIFC3	3801	bcgsc.ca	37	16	57799392	57799392	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KIFC3	NM_001130100	exon11	c.C1491A	p.S497S	.	.	52	4	38	0	.	91
KIR3DX1	90011	bcgsc.ca	37	19	55054768	55054768	+	RNA	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KIR3DX1	.	.	.	.	.	.	67	4	53	0	.	91
KLC2	64837	bcgsc.ca	37	11	66033139	66033139	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KLC2	NM_022822	exon12	c.A1348G	p.T450A	.	.	62	4	48	0	.	90
KLC4	89953	ucsc.edu;bcgsc.ca	37	6	43033408	43033408	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KLC4	NM_201523	exon4	c.T594C	p.P198P	.	.	41	4	31	0	.	94
KLHL42	57542	bcgsc.ca	37	12	27944816	27944816	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_020782	exon2	c.G1048A	p.G350R	.	.	108	5	93	0	.	.
KLK1	3816	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	51323553	51323553	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KLK1	NM_002257	exon3	c.G353C	p.S118T	.	.	121	17	108	1	.	226
KLKB1	3818	bcgsc.ca	37	4	187179299	187179299	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KLKB1	NM_000892	exon15	c.A1850T	p.Y617F	.	.	65	4	56	0	.	227
KNTC1	9735	bcgsc.ca	37	12	123028708	123028708	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KNTC1	NM_014708	exon8	c.A561T	p.L187F	.	.	88	6	95	0	.	543
KNTC1	9735	bcgsc.ca	37	12	123095395	123095395	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KNTC1	NM_014708	exon53	c.C5570T	p.P1857L	.	.	29	4	41	0	.	543
KRBA2	124751	bcgsc.ca	37	17	8273097	8273097	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KRBA2	NM_213597	exon2	c.C834T	p.F278F	.	.	90	4	112	0	.	68
KRT13	3860	bcgsc.ca	37	17	39661402	39661402	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KRT13	NM_002274	exon1	c.T401C	p.V134A	.	.	69	4	79	0	.	95
KRT28	162605	bcgsc.ca	37	17	38955862	38955862	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KRT28	NM_181535	exon1	c.A284G	p.D95G	.	.	82	4	71	0	.	91
KRT83	3889	ucsc.edu	37	12	52711467	52711467	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KRT83	NM_002282	exon4	c.G748A	p.E250K	.	.	37	4	36	0	.	91
KRTAP15-1	254950	bcgsc.ca	37	21	31812747	31812747	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KRTAP15-1	NM_181623	exon1	c.C102T	p.A34A	.	.	48	5	41	0	.	90
KRTAP5-10	387273	mdanderson.org	37	11	71276681	71276681	+	Silent	SNP	T	T	C	rs113879786	bycluster;byfrequency;by1000genomes	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KRTAP5-10	NM_001012710	exon1	c.T48C	p.G16G	.	.	88	22	85	0	T|0.717;C|0.283	91
KRTCAP2	200185	bcgsc.ca	37	1	155141926	155141926	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KRTCAP2	NM_173852	exon5	c.A479G	p.K160R	.	.	222	6	137	0	.	90
KTN1	3895	bcgsc.ca	37	14	56134048	56134048	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KTN1	NM_001079521	exon34	c.G3267T	p.L1089F	.	.	20	4	25	0	.	1147
KTN1	3895	bcgsc.ca	37	14	56146310	56146310	+	Missense_Mutation	SNP	G	G	A	rs200343997		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	KTN1	NM_001079521	exon43	c.G3976A	p.V1326I	.	.	77	4	73	0	G|0.999;A|0.001	1147
L2HGDH	79944	bcgsc.ca	37	14	50768783	50768783	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	L2HGDH	NM_024884	exon3	c.C360A	p.L120L	.	.	71	4	62	0	.	92
LAMA1	284217	bcgsc.ca	37	18	7043235	7043235	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LAMA1	NM_005559	exon8	c.A1146T	p.R382S	.	.	82	4	77	0	.	149
LAMP2	3920	bcgsc.ca	37	X	119576490	119576490	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LAMP2	NM_013995	exon7	c.G892A	p.E298K	.	.	65	4	55	0	.	131
LARS	51520	bcgsc.ca	37	5	145557182	145557182	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LARS	NM_020117	exon2	c.A53G	p.K18R	.	.	154	5	148	0	.	90
LARS	51520	broad.mit.edu;bcgsc.ca	37	5	145533302	145533302	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LARS	NM_020117	exon12	c.A1225G	p.K409E	.	.	154	6	98	0	.	90
LAS1L	81887	ucsc.edu	37	X	64754587	64754587	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LAS1L	NM_031206	exon1	c.G9T	p.W3C	.	.	37	5	38	1	.	196
LCN6	158062	ucsc.edu;bcgsc.ca	37	9	139641977	139641977	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LCN6	NM_198946	exon2	c.G129T	p.R43R	.	.	39	4	33	0	.	90
LEF1	51176	bcgsc.ca	37	4	108985535	108985535	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LEF1	NM_016269	exon10	c.G1122T	p.K374N	.	.	82	6	75	0	.	721
LEPREL2	10536	bcgsc.ca	37	12	6947141	6947141	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LEPREL2	.	.	.	.	.	.	76	4	81	0	.	22
LGSN	51557	bcgsc.ca	37	6	63990368	63990368	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LGSN	NM_016571	exon4	c.T1088C	p.V363A	.	.	53	4	34	0	.	227
LHX9	56956	ucsc.edu;bcgsc.ca	37	1	197890497	197890497	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LHX9	NM_020204	exon3	c.G441T	p.M147I	.	.	48	5	37	0	.	91
LIG4	3981	bcgsc.ca	37	13	108863570	108863570	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LIG4	NM_206937	exon3	c.T47C	p.F16S	.	.	89	4	91	0	.	659
LIPF	8513	bcgsc.ca	37	10	90433465	90433465	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LIPF	NM_001198829	exon8	c.G820A	p.G274R	.	.	78	4	65	0	.	90
LMAN1	3998	bcgsc.ca	37	18	57000458	57000458	+	Silent	SNP	G	G	A	rs138275646		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LMAN1	NM_005570	exon11	c.C1239T	p.T413T	.	.	76	5	81	0	G|1.000;A|0.000	91
LNX2	222484	ucsc.edu;bcgsc.ca	37	13	28124470	28124470	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LNX2	NM_153371	exon9	c.A1937G	p.K646R	.	.	43	4	33	0	.	228
LOC493754	0	bcgsc.ca	37	7	66041897	66041897	+	RNA	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	.	.	.	.	.	.	108	5	91	0	.	.
LOC728613	0	bcgsc.ca	37	5	1615869	1615869	+	RNA	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	.	.	.	.	.	.	140	6	148	1	.	.
LONRF3	79836	bcgsc.ca	37	X	118143142	118143142	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LONRF3	NM_001031855	exon7	c.T1584C	p.A528A	.	.	203	6	186	0	.	289
LONRF3	79836	ucsc.edu;bcgsc.ca	37	X	118148310	118148310	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LONRF3	NM_001031855	exon10	c.C2115A	p.A705A	.	.	46	4	73	0	.	289
LOXL2	4017	ucsc.edu	37	8	23177511	23177511	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LOXL2	NM_002318	exon8	c.G1357T	p.E453X	.	.	50	4	42	0	.	272
LPHN2	23266	bcgsc.ca	37	1	82434871	82434871	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LPHN2	NM_012302	exon13	c.G2482T	p.G828C	.	.	67	4	59	0	.	525
LPHN2	23266	bcgsc.ca	37	1	82434943	82434943	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LPHN2	NM_012302	exon13	c.T2554C	p.C852R	.	.	107	5	101	0	.	525
LPHN3	23284	bcgsc.ca	37	4	62936246	62936246	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LPHN3	NM_015236	exon23	c.C4030A	p.H1344N	.	.	77	4	91	0	.	508
LPIN1	23175	bcgsc.ca	37	2	11932051	11932051	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LPIN1	NM_001261428	exon14	c.A1872G	p.E624E	.	.	210	6	172	0	.	156
LRCH4	4034	ucsc.edu;bcgsc.ca	37	7	100175837	100175837	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LRCH4	NM_002319	exon7	c.T893C	p.L298P	.	.	44	4	53	0	.	136
LRMP	4033	bcgsc.ca	37	12	25256833	25256833	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LRMP	NM_001204126	exon16	c.G996A	p.M332I	.	.	78	4	90	0	.	228
LRMP	4033	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	12	25232338	25232338	+	Nonsense_Mutation	SNP	T	T	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LRMP	NM_001204126	exon6	c.T78A	p.Y26X	.	.	123	22	109	0	.	228
LRP1B	53353	bcgsc.ca	37	2	141072656	141072656	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LRP1B	NM_018557	exon83	c.A12653G	p.K4218R	.	.	91	4	69	0	.	311
LRP1B	53353	bcgsc.ca	37	2	141130669	141130669	+	Missense_Mutation	SNP	C	C	A	rs145915063	alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LRP1B	NM_018557	exon69	c.G10676T	p.R3559L	.	.	89	6	73	0	C|1.000;T|0.000	311
LRP2	4036	bcgsc.ca	37	2	170050358	170050358	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LRP2	NM_004525	exon47	c.G8743T	p.G2915C	.	.	102	5	54	0	.	175
LRP2	4036	bcgsc.ca	37	2	170151178	170151178	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LRP2	NM_004525	exon5	c.G470T	p.C157F	.	.	65	6	50	1	.	175
LRRC30	339291	ucsc.edu;bcgsc.ca	37	18	7231329	7231329	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LRRC30	NM_001105581	exon1	c.G193T	p.D65Y	.	.	40	4	44	0	.	24
LRRC31	79782	bcgsc.ca	37	3	169557932	169557932	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LRRC31	NM_024727	exon9	c.G1497G	p.M499M	.	.	85	4	125	0	.	93
LRRC46	90506	bcgsc.ca	37	17	45914163	45914163	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LRRC46	NM_033413	exon8	c.C643A	p.R215R	.	.	71	4	61	0	.	91
LRRC7	57554	bcgsc.ca	37	1	70486740	70486740	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LRRC7	NM_020794	exon14	c.A1359G	p.R453R	.	.	190	6	182	0	.	163
LRRC7	57554	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	70501869	70501869	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LRRC7	NM_020794	exon17	c.C1947T	p.T649T	.	.	75	9	71	0	.	163
LRRC8C	84230	bcgsc.ca	37	1	90178780	90178780	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LRRC8C	NM_032270	exon3	c.T651C	p.P217P	.	.	120	5	91	0	.	97
LRRIQ1	84125	bcgsc.ca	37	12	85554438	85554438	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LRRIQ1	NM_001079910	exon24	c.T4768C	p.S1590P	.	.	106	5	102	0	.	95
LRRIQ4	344657	bcgsc.ca	37	3	169540157	169540157	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001080460	exon1	c.A448G	p.T150A	.	.	25	3	36	0	.	.
LRRK2	120892	bcgsc.ca	37	12	40697854	40697854	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LRRK2	NM_198578	exon27	c.T3695C	p.I1232T	.	.	106	5	102	0	.	533
LRRK2	120892	bcgsc.ca	37	12	40734124	40734124	+	Silent	SNP	C	C	A	rs199993519	alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LRRK2	NM_198578	exon41	c.C5977A	p.R1993R	.	.	76	4	71	0	.	533
LRRTM3	347731	ucsc.edu;bcgsc.ca	37	10	68687800	68687800	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LRRTM3	NM_178011	exon2	c.C1126A	p.P376T	.	.	35	4	46	0	.	93
LRSAM1	90678	bcgsc.ca	37	9	130217859	130217859	+	Missense_Mutation	SNP	C	C	T	rs139695483		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LRSAM1	NM_001005373	exon5	c.C134T	p.P45L	.	.	62	4	40	0	C|1.000;T|0.000	90
LSG1	55341	bcgsc.ca	37	3	194365396	194365396	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LSG1	NM_018385	exon13	c.A1703G	p.N568S	.	.	191	6	226	0	.	90
LSP1	4046	bcgsc.ca	37	11	1902827	1902827	+	Splice_Site	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LSP1	NM_002339	exon3	c.356+1G>A	.	.	.	47	4	32	0	.	90
LTA4H	4048	bcgsc.ca	37	12	96400145	96400145	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LTA4H	NM_000895	exon16	c.A1477G	p.K493E	.	.	45	4	52	0	.	91
LTBP1	4052	bcgsc.ca	37	2	33588462	33588462	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LTBP1	NM_206943	exon29	c.G4276T	p.D1426Y	.	.	109	5	92	0	.	230
LUZP1	7798	bcgsc.ca	37	1	23419648	23419648	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LUZP1	NM_033631	exon4	c.C1107A	p.G369G	.	.	77	4	113	1	.	90
LY75	4065	bcgsc.ca	37	2	160673420	160673420	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LY75	NM_002349	exon30	c.G4277T	p.G1426V	.	.	137	6	69	0	.	90
LYN	4067	bcgsc.ca	37	8	56864671	56864671	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LYN	NM_002350	exon7	c.C634A	p.Q212K	.	.	61	4	51	0	.	1002
LYST	1130	bcgsc.ca	37	1	235883992	235883992	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LYST	NM_000081	exon40	c.A9529G	p.T3177A	.	.	79	4	64	0	.	143
LZTFL1	54585	bcgsc.ca	37	3	45872565	45872565	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	LZTFL1	NM_020347	exon6	c.G522T	p.Q174H	.	.	136	6	133	0	.	90
MACF1	23499	bcgsc.ca	37	1	39910424	39910424	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MACF1	NM_012090	exon77	c.G13345A	p.G4449R	.	.	45	4	39	0	.	165
MAGEB10	139422	bcgsc.ca	37	X	27840056	27840056	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MAGEB10	NM_182506	exon3	c.C633A	p.I211I	.	.	60	4	62	1	.	130
MAGEL2	54551	bcgsc.ca	37	15	23889656	23889656	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_019066	exon1	c.A3234G	p.K1078K	.	.	61	5	50	0	.	.
MALSU1	115416	ucsc.edu	37	7	23349105	23349105	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_138446	exon4	c.T648C	p.I216I	.	.	37	4	23	0	.	.
MAML3	55534	bcgsc.ca	37	4	140641257	140641257	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MAML3	NM_018717	exon6	c.C2625A	p.T875T	.	.	66	4	89	1	.	455
MAN1A2	10905	bcgsc.ca	37	1	118042143	118042143	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MAN1A2	NM_006699	exon11	c.A1644G	p.P548P	.	.	87	4	69	0	.	90
MAP2	4133	bcgsc.ca	37	2	210558828	210558828	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MAP2	NM_002374	exon7	c.C1934A	p.P645Q	.	.	52	4	39	0	.	591
MAP2	4133	bcgsc.ca	37	2	210588372	210588372	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MAP2	NM_001039538	exon12	c.T1230C	p.G410G	.	.	72	4	66	0	.	591
MAP2K5	5607	bcgsc.ca	37	15	68065072	68065072	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MAP2K5	NM_145160	exon21	c.A1224G	p.P408P	.	.	89	5	82	0	.	546
MAP3K1	4214	bcgsc.ca	37	5	56174923	56174923	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MAP3K1	NM_005921	exon11	c.C2082T	p.A694A	.	.	73	5	60	0	.	956
MAP3K14	9020	bcgsc.ca	37	17	43362289	43362289	+	RNA	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MAP3K14	.	.	.	.	.	.	63	4	61	0	.	1453
MAP3K5	4217	bcgsc.ca	37	6	136935313	136935313	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MAP3K5	NM_005923	exon16	c.G2262A	p.M754I	.	.	49	4	47	0	.	982
MAP4K4	9448	bcgsc.ca	37	2	102493463	102493463	+	Splice_Site	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MAP4K4	NM_145686	exon25	c.2909-2A>G	.	.	.	92	4	95	0	.	547
MAP7D3	79649	bcgsc.ca	37	X	135306997	135306997	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MAP7D3	NM_024597	exon14	c.A2182G	p.N728D	.	.	63	4	60	0	.	110
MAPKAPK5	8550	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	112308091	112308091	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MAPKAPK5	NM_139078	exon6	c.G410A	p.R137Q	.	.	151	27	149	0	.	1215
MARCH4	57574	bcgsc.ca	37	2	217124173	217124173	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MARCH4	NM_020814	exon4	c.C1095A	p.A365A	.	.	62	4	66	0	.	69
MARCH6	10299	bcgsc.ca	37	5	10377953	10377953	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MARCH6	NM_005885	exon2	c.G63T	p.P21P	.	.	161	5	105	0	.	501
MARCH6	10299	bcgsc.ca	37	5	10378942	10378942	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MARCH6	NM_005885	exon3	c.C188A	p.P63Q	.	.	280	9	191	0	.	501
MARCH7	64844	bcgsc.ca	37	2	160605230	160605230	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MARCH7	NM_022826	exon5	c.G1429T	p.G477W	.	.	66	4	59	0	.	68
MARCO	8685	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	119739211	119739211	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MARCO	NM_006770	exon10	c.C880T	p.P294S	.	.	89	27	84	0	.	95
MARK3	4140	bcgsc.ca	37	14	103946784	103946784	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MARK3	NM_001128919	exon14	c.A1543T	p.T515S	.	.	92	4	71	0	.	360
MASP1	5648	ucsc.edu	37	3	186953798	186953798	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MASP1	NM_139125	exon11	c.A1861G	p.K621E	.	.	26	4	17	0	.	94
MAST1	22983	bcgsc.ca	37	19	12975911	12975911	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MAST1	NM_014975	exon14	c.C1557T	p.S519S	.	.	61	4	56	0	.	523
MAST2	23139	bcgsc.ca	37	1	46476551	46476551	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MAST2	NM_015112	exon10	c.C1128A	p.G376G	.	.	69	4	44	0	.	581
MAST4	375449	bcgsc.ca	37	5	66398374	66398374	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MAST4	NM_001164664	exon9	c.T1081C	p.S361P	.	.	162	8	114	2	.	647
MASTL	84930	ucsc.edu	37	10	27444441	27444441	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MASTL	NM_032844	exon1	c.C86T	p.P29L	.	.	45	4	32	0	.	522
MATN3	4148	bcgsc.ca	37	2	20200229	20200229	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_002381	exon5	c.C1141A	p.L381M	.	.	96	5	77	0	.	.
MBOAT1	154141	bcgsc.ca	37	6	20152945	20152945	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MBOAT1	NM_001080480	exon2	c.T155C	p.I52T	.	.	66	4	56	0	.	68
MC4R	4160	bcgsc.ca	37	18	58038708	58038708	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MC4R	NM_005912	exon1	c.T875C	p.M292T	.	.	56	4	68	0	.	522
MCM3AP	8888	bcgsc.ca	37	21	47671483	47671483	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MCM3AP	NM_003906	exon20	c.G4250T	p.S1417I	.	.	51	4	60	0	.	291
MCPH1	79648	bcgsc.ca	37	8	6302307	6302307	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MCPH1	NM_001172574	exon8	c.A1064G	p.K355R	.	.	82	4	103	0	.	229
MCTP2	55784	bcgsc.ca	37	15	94883434	94883434	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MCTP2	NM_001159643	exon5	c.G787T	p.D263Y	.	.	136	6	138	0	.	93
MDN1	23195	bcgsc.ca	37	6	90449976	90449976	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MDN1	NM_014611	exon32	c.G4570A	p.G1524R	.	.	128	5	122	0	.	100
MECR	51102	bcgsc.ca	37	1	29543106	29543106	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MECR	NM_016011	exon2	c.A268G	p.I90V	.	.	14	3	46	0	.	91
MED12L	116931	bcgsc.ca	37	3	151105777	151105777	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MED12L	NM_053002	exon35	c.C5163A	p.R1721R	.	.	48	4	50	0	.	576
MED25	81857	bcgsc.ca	37	19	50339022	50339022	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MED25	NM_030973	exon16	c.C1785A	p.T595T	.	.	66	4	44	0	.	91
MEDAG	84935	bcgsc.ca	37	13	31495229	31495229	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_032849	exon3	c.T467C	p.I156T	.	.	52	4	50	0	.	.
MEGF6	1953	bcgsc.ca	37	1	3407110	3407110	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MEGF6	NM_001409	exon37	c.T4608C	p.G1536G	.	.	61	4	78	0	.	90
MEGF9	1955	bcgsc.ca	37	9	123370048	123370048	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001080497	exon5	c.A1328G	p.H443R	.	.	78	4	56	0	.	.
MEPCE	56257	bcgsc.ca	37	7	100030576	100030576	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MEPCE	NM_019606	exon2	c.A1706G	p.E569G	.	.	80	4	62	1	.	91
METTL13	51603	bcgsc.ca	37	1	171752981	171752981	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	METTL13	NM_015935	exon2	c.G255T	p.K85N	.	.	130	5	89	0	.	91
METTL2B	55798	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	7	128119304	128119304	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	METTL2B	NM_018396	exon3	c.G295A	p.E99K	.	.	250	41	238	0	.	23
MGAM	8972	ucsc.edu	37	7	141752223	141752223	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MGAM	NM_004668	exon25	c.A2935G	p.T979A	.	.	43	4	46	0	.	70
MGAT3	4248	bcgsc.ca	37	22	39883692	39883692	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MGAT3	NM_002409	exon2	c.G340A	p.G114S	.	.	37	4	39	0	.	90
MID2	11043	bcgsc.ca	37	X	107084531	107084531	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MID2	NM_012216	exon2	c.A636G	p.Q212Q	.	.	99	5	106	0	.	227
MIDN	90007	bcgsc.ca	37	19	1254983	1254983	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MIDN	NM_177401	exon6	c.C779A	p.P260H	.	.	25	4	36	0	.	90
MITF	4286	bcgsc.ca	37	3	70005604	70005604	+	Splice_Site	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MITF	NM_198159	exon8	c.938-2A>G	.	.	.	54	4	43	0	.	524
MLF2	8079	ucsc.edu;bcgsc.ca	37	12	6859046	6859046	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MLF2	NM_005439	exon7	c.A527G	p.E176G	.	.	31	5	29	0	.	153
MLL2	8085	ucsc.edu	37	12	49420702	49420702	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MLL2	NM_003482	exon48	c.T15047C	p.L5016P	.	.	41	4	26	1	.	612
MLL	4297	bcgsc.ca	37	11	118392818	118392818	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MLL	NM_001197104	exon36	c.C11850T	p.P3950P	.	.	59	4	53	0	.	1255
MLPH	79083	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	238434305	238434305	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MLPH	NM_001042467	exon7	c.A737T	p.E246V	.	.	52	14	40	0	.	91
MMAA	166785	bcgsc.ca	37	4	146572227	146572227	+	Silent	SNP	G	G	T	rs11721553	byfrequency;alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MMAA	NM_172250	exon5	c.G747T	p.S249S	.	.	106	6	101	0	G|0.928;A|0.072	91
MMP19	4327	bcgsc.ca	37	12	56231401	56231401	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MMP19	NM_002429	exon8	c.G1126A	p.V376I	.	.	53	4	65	0	.	227
MOGAT1	116255	bcgsc.ca	37	2	223554164	223554164	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MOGAT1	NM_058165	exon3	c.T454C	p.F152L	.	.	134	5	82	0	.	67
MON2	23041	bcgsc.ca	37	12	62949870	62949870	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MON2	NM_015026	exon25	c.T3307C	p.S1103P	.	.	122	5	104	0	.	514
MON2	23041	bcgsc.ca	37	12	62954686	62954686	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MON2	NM_015026	exon26	c.T3825C	p.A1275A	.	.	81	4	99	1	.	514
MPHOSPH10	10199	ucsc.edu;bcgsc.ca	37	2	71366928	71366928	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MPHOSPH10	NM_005791	exon6	c.C1244A	p.P415H	.	.	43	4	36	0	.	93
MPHOSPH8	54737	bcgsc.ca	37	13	20242654	20242654	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MPHOSPH8	NM_017520	exon11	c.C2312A	p.P771Q	.	.	52	4	58	0	.	68
MPP3	4356	broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	41879127	41879127	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MPP3	NM_001932	exon20	c.T1700C	p.V567A	.	.	20	5	25	0	.	91
MRE11A	4361	bcgsc.ca	37	11	94209465	94209465	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MRE11A	NM_005591	exon7	c.C649A	p.H217N	.	.	62	4	78	0	.	722
MRPL48	51642	bcgsc.ca	37	11	73516117	73516117	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_016055	exon2	c.C67A	p.L23I	.	.	115	5	89	0	.	.
MRPS25	64432	ucsc.edu;bcgsc.ca	37	3	15094002	15094002	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MRPS25	NM_022497	exon4	c.C468A	p.P156P	.	.	48	4	73	0	.	90
MS4A1	931	bcgsc.ca	37	11	60233393	60233393	+	Splice_Site	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MS4A1	NM_152866	exon6	c.337-1G>T	.	.	.	135	5	126	0	.	525
MTG1	92170	ucsc.edu;bcgsc.ca	37	10	135211954	135211954	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MTG1	NM_138384	exon4	c.T298C	p.L100L	.	.	42	5	40	0	.	91
MTMR10	54893	bcgsc.ca	37	15	31240528	31240528	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MTMR10	NM_017762	exon13	c.C1354A	p.H452N	.	.	138	7	127	0	.	91
MTMR3	8897	bcgsc.ca	37	22	30394800	30394800	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MTMR3	NM_153050	exon8	c.G511T	p.D171Y	.	.	51	4	35	0	.	292
MTMR8	55613	bcgsc.ca	37	X	63557257	63557257	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MTMR8	NM_017677	exon9	c.A992G	p.K331R	.	.	54	4	73	0	.	195
MTRF1L	54516	bcgsc.ca	37	6	153319755	153319755	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MTRF1L	NM_019041	exon2	c.A269G	p.E90G	.	.	59	4	70	0	.	90
MUC16	94025	ucsc.edu;bcgsc.ca	37	19	9048403	9048403	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MUC16	NM_024690	exon5	c.T33228C	p.S11076S	.	.	48	4	78	0	.	566
MUC17	140453	bcgsc.ca	37	7	100675834	100675834	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MUC17	NM_001040105	exon3	c.A1137G	p.E379E	.	.	59	5	54	0	.	95
MYBPC1	4604	bcgsc.ca	37	12	102023305	102023305	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MYBPC1	NM_206819	exon6	c.G272T	p.G91V	.	.	13	3	22	0	.	94
MYBPC2	4606	bcgsc.ca	37	19	50951630	50951630	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MYBPC2	NM_004533	exon13	c.C1455A	p.T485T	.	.	60	4	53	0	.	67
MYCBP2	23077	bcgsc.ca	37	13	77791975	77791975	+	Silent	SNP	A	A	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MYCBP2	NM_015057	exon21	c.T3057G	p.S1019S	.	.	84	4	88	1	.	236
MYH10	4628	bcgsc.ca	37	17	8411937	8411937	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MYH10	NM_001256012	exon26	c.A3149G	p.E1050G	.	.	120	5	166	2	.	92
MYH10	4628	bcgsc.ca	37	17	8448865	8448865	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MYH10	NM_001256012	exon13	c.C1332T	p.R444R	.	.	42	4	42	0	.	92
MYH10	4628	ucsc.edu;bcgsc.ca	37	17	8381680	8381680	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MYH10	NM_001256012	exon41	c.A5682G	p.R1894R	.	.	47	4	61	0	.	92
MYH1	4619	bcgsc.ca	37	17	10397949	10397949	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MYH1	NM_005963	exon38	c.C5508A	p.R1836R	.	.	81	5	83	0	.	171
MYH2	4620	bcgsc.ca	37	17	10430331	10430331	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MYH2	NM_017534	exon29	c.C3914T	p.S1305F	.	.	76	4	99	0	.	194
MYH4	4622	bcgsc.ca	37	17	10359849	10359849	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MYH4	NM_017533	exon17	c.G1921A	p.G641S	.	.	78	6	129	0	.	102
MYH7	4625	bcgsc.ca	37	14	23894998	23894998	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MYH7	NM_000257	exon20	c.C2192A	p.P731H	.	.	67	4	54	0	.	94
MYH8	4626	bcgsc.ca	37	17	10307802	10307802	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MYH8	NM_002472	exon22	c.A2533G	p.S845G	.	.	217	7	275	2	.	101
MYL9	10398	bcgsc.ca	37	20	35173376	35173376	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MYL9	NM_006097	exon2	c.A89G	p.Q30R	.	.	70	4	75	0	.	90
MYO16	23026	broad.mit.edu;mdanderson.org	37	13	109507803	109507803	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MYO16	NM_001198950	exon11	c.C1261T	p.P421S	.	.	56	11	57	2	.	142
MYO1F	4542	bcgsc.ca	37	19	8616979	8616979	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MYO1F	NM_012335	exon7	c.C574T	p.L192L	.	.	55	4	50	0	.	93
MYO1F	4542	ucsc.edu	37	19	8587592	8587592	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MYO1F	NM_012335	exon26	c.C2976T	p.S992S	.	.	46	4	35	0	.	93
MYO3A	53904	ucsc.edu	37	10	26436490	26436490	+	Splice_Site	SNP	T	T	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MYO3A	NM_017433	exon23	c.2635+2T>A	.	.	.	43	4	36	2	.	1007
MYO3B	140469	bcgsc.ca	37	2	171300523	171300523	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MYO3B	NM_001083615	exon23	c.T2697C	p.S899S	.	.	74	4	68	0	.	530
MYO3B	140469	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	171358299	171358299	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MYO3B	NM_138995	exon28	c.G3294T	p.W1098C	.	.	38	14	48	0	.	530
MYOF	26509	bcgsc.ca	37	10	95088518	95088518	+	Splice_Site	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MYOF	NM_013451	exon46	c.5131+2T>A	.	.	.	84	5	70	0	.	93
MYOF	26509	bcgsc.ca	37	10	95211836	95211836	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MYOF	NM_133337	exon3	c.G207A	p.V69V	.	.	163	5	150	0	.	93
MYOT	9499	bcgsc.ca	37	5	137219189	137219189	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MYOT	NM_006790	exon7	c.A933G	p.E311E	.	.	140	5	87	0	.	153
MYT1	4661	ucsc.edu;bcgsc.ca	37	20	62839474	62839474	+	Missense_Mutation	SNP	C	C	A	rs200028860	alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	MYT1	NM_004535	exon7	c.C925A	p.P309T	.	.	27	6	21	0	C|1.000;T|0.000	704
N4BP2	55728	bcgsc.ca	37	4	40119645	40119645	+	Splice_Site	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	N4BP2	NM_018177	exon8	c.1820+1G>A	.	.	.	64	4	51	1	.	602
NAA16	79612	bcgsc.ca	37	13	41948877	41948877	+	Splice_Site	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NAA16	NM_024561	exon19	c.2300-1G>T	.	.	.	97	4	80	0	.	90
NAA30	122830	bcgsc.ca	37	14	57863552	57863552	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NAA30	NM_001011713	exon3	c.C854A	p.A285D	.	.	86	4	80	0	.	91
NAA35	60560	bcgsc.ca	37	9	88622307	88622307	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NAA35	NM_024635	exon14	c.G1151T	p.G384V	.	.	67	4	57	0	.	92
NAALADL2	254827	bcgsc.ca	37	3	175520852	175520852	+	Missense_Mutation	SNP	G	G	T	rs75609505		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NAALADL2	NM_207015	exon14	c.G2249T	p.W750L	.	.	30	5	39	1	.	47
NAB1	4664	bcgsc.ca	37	2	191523984	191523984	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NAB1	NM_005966	exon4	c.G82T	p.D28Y	.	.	120	5	100	0	.	226
NAE1	8883	bcgsc.ca	37	16	66855367	66855367	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NAE1	NM_003905	exon7	c.T497A	p.I166K	.	.	88	4	68	0	.	69
NAGS	162417	bcgsc.ca	37	17	42085835	42085835	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NAGS	NM_153006	exon7	c.G1471A	p.G491S	.	.	93	4	89	0	.	90
NALCN	259232	bcgsc.ca	37	13	101797199	101797199	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NALCN	NM_052867	exon16	c.C1888T	p.R630C	.	.	91	5	82	0	.	167
NANOGNB	360030	bcgsc.ca	37	12	7922601	7922601	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001145465	exon2	c.A125G	p.D42G	.	.	118	5	112	0	.	.
NAP1L1	4673	bcgsc.ca	37	12	76444365	76444365	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NAP1L1	NM_004537	exon12	c.C1005A	p.I335I	.	.	108	5	116	0	.	92
NAP1L1	4673	broad.mit.edu	37	12	76454015	76454015	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NAP1L1	NM_004537	exon5	c.T251C	p.L84P	.	.	173	8	177	3	.	92
NAPA	8775	bcgsc.ca	37	19	48003907	48003907	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NAPA	NM_003827	exon3	c.A278G	p.K93R	.	.	61	4	52	0	.	90
NAPSA	9476	ucsc.edu	37	19	50861949	50861949	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NAPSA	NM_004851	exon9	c.A1124G	p.D375G	.	.	37	6	29	0	.	90
NAT10	55226	bcgsc.ca	37	11	34149040	34149040	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NAT10	NM_024662	exon12	c.G1138A	p.G380S	.	.	77	4	72	0	.	92
NBEA	26960	bcgsc.ca	37	13	35751131	35751131	+	Splice_Site	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NBEA	NM_015678	exon28	c.4555-2A>G	.	.	.	68	4	66	0	.	144
NBPF1	55672	broad.mit.edu	37	1	16891333	16891333	+	Missense_Mutation	SNP	C	C	T	rs3872309	bycluster;byfrequency	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	.	.	.	.	.	.	20	6	40	0	C|0.500;T|0.500	.
NBR1	4077	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	41347052	41347052	+	Silent	SNP	T	T	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NBR1	NM_031862	exon14	c.T1746G	p.P582P	.	.	117	16	102	0	.	130
NCAPG2	54892	bcgsc.ca	37	7	158455032	158455032	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NCAPG2	NM_017760	exon16	c.G1843T	p.D615Y	.	.	52	4	52	0	.	272
NCBP1	4686	bcgsc.ca	37	9	100413644	100413644	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NCBP1	NM_002486	exon10	c.C1048T	p.H350Y	.	.	130	7	97	0	.	90
NCOR2	9612	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	12	124835268	124835268	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NCOR2	NM_006312	exon30	c.G3709A	p.V1237I	.	.	32	10	14	0	.	229
NDFIP2	54602	bcgsc.ca	37	13	80122520	80122520	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NDFIP2	NM_019080	exon6	c.C898A	p.L300I	.	.	154	6	174	1	.	91
NDUFA1	4694	bcgsc.ca	37	X	119005929	119005929	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NDUFA1	NM_004541	exon1	c.C55T	p.P19S	.	.	78	4	75	0	.	193
NDUFAB1	4706	bcgsc.ca	37	16	23598565	23598565	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NDUFAB1	NM_005003	exon2	c.C244A	p.R82S	.	.	68	5	73	0	.	90
NDUFS1	4719	bcgsc.ca	37	2	207007551	207007551	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NDUFS1	NM_001199984	exon11	c.A1034G	p.Q345R	.	.	90	5	58	0	.	91
NECAB1	64168	bcgsc.ca	37	8	91940471	91940471	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NECAB1	NM_022351	exon8	c.C637A	p.Q213K	.	.	76	5	68	0	.	23
NECAP1	25977	bcgsc.ca	37	12	8245315	8245315	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NECAP1	NM_015509	exon5	c.A427G	p.M143V	.	.	64	4	40	0	.	91
NEDD1	121441	bcgsc.ca	37	12	97337452	97337452	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NEDD1	NM_001135175	exon11	c.G1430T	p.G477V	.	.	79	6	91	0	.	90
NELFB	25920	broad.mit.edu	37	9	140166958	140166958	+	Splice_Site	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_015456	exon12	c.1488-1G>A	.	.	.	26	6	21	0	.	.
NELFCD	51497	bcgsc.ca	37	20	57568711	57568711	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_198976	exon13	c.G1527T	p.M509I	.	.	89	4	78	1	.	.
NEMF	9147	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	50269987	50269987	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NEMF	NM_004713	exon20	c.A1883G	p.E628G	.	.	105	32	105	0	.	90
NF2	4771	bcgsc.ca	37	22	30070903	30070903	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NF2	NM_000268	exon13	c.G1419A	p.L473L	.	.	54	4	42	0	.	4696
NFKB1	4790	bcgsc.ca	37	4	103446699	103446699	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NFKB1	NM_003998	exon2	c.G24T	p.L8F	.	.	212	7	203	2	.	912
NIM1	0	bcgsc.ca	37	5	43280234	43280234	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_153361	exon4	c.G714T	p.A238A	.	.	82	4	84	0	.	.
NIPAL3	57185	bcgsc.ca	37	1	24790546	24790546	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NIPAL3	NM_020448	exon11	c.A957T	p.L319F	.	.	73	4	99	0	.	90
NIPBL	25836	bcgsc.ca	37	5	37036555	37036555	+	Silent	SNP	T	T	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NIPBL	NM_015384	exon33	c.T5937A	p.V1979V	.	.	134	6	106	1	.	293
NKRF	55922	bcgsc.ca	37	X	118724721	118724721	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NKRF	NM_001173487	exon4	c.G712A	p.E238K	.	.	90	5	97	0	.	131
NLN	57486	bcgsc.ca	37	5	65077097	65077097	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NLN	NM_020726	exon6	c.C671A	p.P224H	.	.	87	4	54	0	.	90
NLRC5	84166	ucsc.edu;bcgsc.ca	37	16	57075465	57075465	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NLRC5	NM_032206	exon17	c.A3008G	p.H1003R	.	.	35	4	33	0	.	159
NLRP4	147945	bcgsc.ca	37	19	56363458	56363458	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NLRP4	NM_134444	exon2	c.T12C	p.S4S	.	.	54	4	47	0	.	216
NLRP8	126205	bcgsc.ca	37	19	56466735	56466735	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NLRP8	NM_176811	exon3	c.C1311A	p.T437T	.	.	63	5	36	0	.	361
NMB	4828	ucsc.edu	37	15	85198641	85198641	+	Splice_Site	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NMB	NM_021077	exon4	c.331-1G>T	.	.	.	43	4	41	0	.	90
NMD3	51068	bcgsc.ca	37	3	160956520	160956520	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NMD3	NM_015938	exon9	c.A659T	p.Y220F	.	.	127	5	120	0	.	91
NOB1	28987	bcgsc.ca	37	16	69776370	69776370	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NOB1	NM_014062	exon9	c.C1104A	p.A368A	.	.	76	5	50	0	.	90
NOL11	25926	bcgsc.ca	37	17	65735126	65735126	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NOL11	NM_015462	exon15	c.G1842T	p.T614T	.	.	70	4	65	0	.	90
NOL8	55035	bcgsc.ca	37	9	95078352	95078352	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NOL8	NM_017948	exon7	c.C555T	p.T185T	.	.	156	6	190	0	.	23
NOSTRIN	115677	bcgsc.ca	37	2	169717397	169717397	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NOSTRIN	NM_001171631	exon19	c.C1443A	p.S481R	.	.	76	6	54	0	.	90
NOTCH2	4853	bcgsc.ca	37	1	120471769	120471769	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NOTCH2	NM_024408	exon23	c.G3722T	p.C1241F	.	.	103	5	96	0	.	1441
NOTCH3	4854	bcgsc.ca	37	19	15303079	15303079	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NOTCH3	NM_000435	exon4	c.T371C	p.L124P	.	.	56	5	42	0	.	855
NOTCH3	4854	ucsc.edu	37	19	15276733	15276733	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NOTCH3	NM_000435	exon30	c.C5532A	p.H1844Q	.	.	41	4	27	0	.	855
NPAT	4863	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	108032148	108032148	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NPAT	NM_002519	exon17	c.C3665T	p.S1222L	.	.	250	42	285	1	.	117
NPBWR1	2831	bcgsc.ca	37	8	53853346	53853346	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NPBWR1	NM_005285	exon1	c.C879A	p.T293T	.	.	51	4	42	0	.	155
NPHP3	27031	ucsc.edu;bcgsc.ca	37	3	132418879	132418879	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NPHP3	NM_153240	exon12	c.T1770C	p.S590S	.	.	41	4	32	0	.	91
NPR1	4881	ucsc.edu;bcgsc.ca	37	1	153660156	153660156	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NPR1	NM_000906	exon14	c.T2139C	p.P713P	.	.	60	4	29	0	.	393
NR3C2	4306	ucsc.edu;bcgsc.ca	37	4	149115938	149115938	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NR3C2	NM_001166104	exon4	c.G1973T	p.C658F	.	.	32	5	37	0	.	154
NR5A1	2516	ucsc.edu	37	9	127245273	127245273	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NR5A1	NM_004959	exon7	c.C1150A	p.L384M	.	.	28	4	18	0	.	186
NR6A1	2649	bcgsc.ca	37	9	127298197	127298197	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NR6A1	NM_033334	exon7	c.G1039A	p.V347I	.	.	75	5	72	0	.	189
NRAP	4892	bcgsc.ca	37	10	115377217	115377217	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NRAP	NM_001261463	exon26	c.G2970T	p.V990V	.	.	63	4	55	0	.	522
NRDE2	55051	bcgsc.ca	37	14	90769182	90769182	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_017970	exon6	c.C1293T	p.T431T	.	.	57	4	47	0	.	.
NRG3	10718	bcgsc.ca	37	10	83635804	83635804	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NRG3	NM_001165972	exon1	c.C708A	p.H236Q	.	.	27	4	20	0	.	522
NRIP1	8204	bcgsc.ca	37	21	16338569	16338569	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NRIP1	NM_003489	exon4	c.A1945G	p.R649G	.	.	123	6	73	0	.	186
NRXN2	9379	ucsc.edu	37	11	64427832	64427832	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NRXN2	NM_015080	exon11	c.G2361T	p.G787G	.	.	52	4	53	0	.	232
NSD1	64324	bcgsc.ca	37	5	176637052	176637052	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NSD1	NM_022455	exon5	c.T1652C	p.L551P	.	.	44	5	50	0	.	188
NSUN7	79730	bcgsc.ca	37	4	40778104	40778104	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NSUN7	NM_024677	exon7	c.T864C	p.A288A	.	.	89	4	93	0	.	90
NT5DC3	51559	bcgsc.ca	37	12	104187752	104187752	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NT5DC3	NM_001031701	exon7	c.C777T	p.I259I	.	.	84	4	79	0	.	228
NTN4	59277	ucsc.edu;bcgsc.ca	37	12	96181034	96181034	+	Silent	SNP	G	G	A	rs138865446	byfrequency	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NTN4	NM_021229	exon2	c.C268T	p.L90L	.	.	43	4	36	0	G|1.000;A|0.000	92
NUDT17	200035	bcgsc.ca	37	1	145586670	145586670	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	NUDT17	NM_001012758	exon8	c.T906C	p.S302S	.	.	135	5	100	0	.	90
OAS2	4939	bcgsc.ca	37	12	113424960	113424960	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	OAS2	NM_002535	exon2	c.G295T	p.D99Y	.	.	56	5	61	0	.	91
OAS2	4939	ucsc.edu;bcgsc.ca	37	12	113433226	113433226	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	OAS2	NM_002535	exon3	c.C574A	p.R192S	.	.	41	4	48	0	.	91
ODC1	4953	bcgsc.ca	37	2	10581744	10581744	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ODC1	NM_002539	exon11	c.G1132T	p.G378C	.	.	134	6	129	0	.	69
OGFRL1	79627	bcgsc.ca	37	6	72011443	72011443	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	OGFRL1	NM_024576	exon7	c.C1047A	p.S349S	.	.	125	7	101	0	.	68
OGG1	4968	ucsc.edu	37	3	9796525	9796525	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	OGG1	NM_016819	exon4	c.G703T	p.E235X	.	.	45	4	30	0	.	660
OMP	4975	bcgsc.ca	37	11	76814023	76814023	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_006189	exon1	c.G138A	p.L46L	.	.	71	5	54	0	.	.
OR10A5	144124	bcgsc.ca	37	11	6867525	6867525	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	OR10A5	NM_178168	exon1	c.C612T	p.T204T	.	.	143	5	121	0	.	71
OR10T2	128360	bcgsc.ca	37	1	158368880	158368880	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	OR10T2	NM_001004475	exon1	c.C377A	p.A126E	.	.	113	5	74	0	.	70
OR1S2	219958	bcgsc.ca	37	11	57971571	57971571	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	OR1S2	NM_001004459	exon1	c.T83C	p.L28P	.	.	155	5	141	0	.	69
OR2G6	391211	bcgsc.ca	37	1	248685856	248685856	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	OR2G6	NM_001013355	exon1	c.C909A	p.T303T	.	.	54	4	56	1	.	71
OR2J3	442186	bcgsc.ca	37	6	29080088	29080088	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	OR2J3	NM_001005216	exon1	c.C421T	p.P141S	.	.	235	12	209	7	.	90
OR2V2	285659	bcgsc.ca	37	5	180582768	180582768	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	OR2V2	NM_206880	exon1	c.T826C	p.S276P	.	.	124	6	105	0	.	69
OR2W1	26692	bcgsc.ca	37	6	29012367	29012367	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	OR2W1	NM_030903	exon1	c.G586A	p.E196K	.	.	73	4	78	1	.	93
OR4C13	283092	bcgsc.ca	37	11	49974297	49974297	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	OR4C13	NM_001001955	exon1	c.T323C	p.V108A	.	.	71	4	72	0	.	72
OR4C15	81309	ucsc.edu	37	11	55322044	55322044	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	OR4C15	NM_001001920	exon1	c.A262G	p.I88V	.	.	44	4	20	0	.	70
OR4K17	390436	bcgsc.ca	37	14	20585608	20585608	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	OR4K17	NM_001004715	exon1	c.C43A	p.L15I	.	.	135	5	160	0	.	71
OR5M9	390162	bcgsc.ca	37	11	56230574	56230574	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	OR5M9	NM_001004743	exon1	c.T304C	p.F102L	.	.	62	5	31	0	.	71
OR6B2	389090	bcgsc.ca	37	2	240968917	240968917	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001005853	exon1	c.T930C	p.T310T	.	.	97	6	62	0	.	.
OR6K2	81448	bcgsc.ca	37	1	158670053	158670053	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	OR6K2	NM_001005279	exon1	c.T390C	p.H130H	.	.	77	4	38	0	.	69
OR7C2	26658	bcgsc.ca	37	19	15052513	15052513	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	OR7C2	NM_012377	exon1	c.C213A	p.I71I	.	.	57	4	63	0	.	71
OR8B4	283162	bcgsc.ca	37	11	124294426	124294426	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	OR8B4	NM_001005196	exon1	c.G342T	p.L114F	.	.	62	4	49	0	.	69
OSBPL8	114882	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	76765334	76765334	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	OSBPL8	NM_020841	exon19	c.A1948G	p.T650A	.	.	65	12	54	0	.	69
OTOGL	283310	bcgsc.ca	37	12	80764379	80764379	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_173591	exon55	c.C6618A	p.T2206T	.	.	73	5	77	0	.	.
OTOGL	283310	ucsc.edu;bcgsc.ca	37	12	80655780	80655780	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_173591	exon18	c.C1894A	p.Q632K	.	.	50	6	34	0	.	.
P2RX4	5025	bcgsc.ca	37	12	121666606	121666606	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	P2RX4	NM_001256796	exon8	c.C732A	p.P244P	.	.	56	4	64	0	.	68
P2RY8	286530	bcgsc.ca	37	X	1585261	1585261	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	P2RY8	NM_178129	exon2	c.A191G	p.N64S	.	.	65	6	77	1	.	522
PACS1	55690	bcgsc.ca	37	11	66010640	66010640	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PACS1	NM_018026	exon24	c.C2781T	p.S927S	.	.	20	3	24	0	.	74
PAK1	5058	bcgsc.ca	37	11	77047243	77047243	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PAK1	NM_001128620	exon13	c.A1301G	p.E434G	.	.	72	4	70	0	.	957
PAK2	5062	bcgsc.ca	37	3	196533459	196533459	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PAK2	NM_002577	exon6	c.A478G	p.K160E	.	.	58	4	60	0	.	957
PAK4	10298	bcgsc.ca	37	19	39663564	39663564	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PAK4	NM_001014832	exon3	c.G211T	p.V71L	.	.	50	4	42	0	.	957
PAN3	255967	bcgsc.ca	37	13	28752020	28752020	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PAN3	NM_175854	exon4	c.C638A	p.A213D	.	.	81	4	103	1	.	69
PAPL	0	bcgsc.ca	37	19	39590924	39590924	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001004318	exon5	c.G563T	p.R188L	.	.	59	4	37	0	.	.
PARD6B	84612	bcgsc.ca	37	20	49366314	49366314	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PARD6B	NM_032521	exon3	c.C408T	p.P136P	.	.	67	4	34	0	.	91
PARP11	57097	bcgsc.ca	37	12	3923355	3923355	+	Splice_Site	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PARP11	NM_020367	exon8	c.549-1G>T	.	.	.	30	4	25	0	.	523
PARP4	143	ucsc.edu;bcgsc.ca	37	13	25026551	25026551	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PARP4	NM_006437	exon24	c.G3007T	p.G1003C	.	.	45	4	39	0	.	94
PARVA	55742	bcgsc.ca	37	11	12495478	12495478	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PARVA	NM_018222	exon3	c.C365T	p.T122I	.	.	48	4	56	0	.	93
PASD1	139135	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	X	150839639	150839639	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PASD1	NM_173493	exon12	c.G1201T	p.A401S	.	.	109	21	94	0	.	133
PAWR	5074	bcgsc.ca	37	12	79990290	79990290	+	Splice_Site	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PAWR	NM_002583	exon6	c.831+1G>A	.	.	.	50	4	51	0	.	90
PCDH10	57575	ucsc.edu;bcgsc.ca	37	4	134071608	134071608	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PCDH10	NM_032961	exon1	c.C313A	p.L105M	.	.	36	4	31	0	.	92
PCDH15	65217	ucsc.edu	37	10	55698632	55698632	+	Nonsense_Mutation	SNP	G	G	A	rs202033121		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PCDH15	NM_001142763	exon26	c.C3331T	p.R1111X	.	.	31	4	23	0	.	193
PCDH19	57526	ucsc.edu	37	X	99662662	99662662	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PCDH19	NM_001184880	exon1	c.T934A	p.Y312N	.	.	57	4	38	0	.	110
PCDHA2	56146	bcgsc.ca	37	5	140175668	140175668	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PCDHA2	NM_031495	exon1	c.G1119T	p.T373T	.	.	104	6	82	0	.	94
PCDHGA1	56114	bcgsc.ca	37	5	140711879	140711879	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PCDHGA1	NM_018912	exon1	c.G1628A	p.S543N	.	.	56	4	54	0	.	137
PCDHGA8	9708	broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	140772531	140772531	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_014004	exon1	c.G151T	p.D51Y	.	.	51	8	42	0	.	.
PCDHGA9	56107	bcgsc.ca	37	5	140782998	140782998	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_032089	exon1	c.C479A	p.P160Q	.	.	80	4	68	0	.	.
PCF11	51585	bcgsc.ca	37	11	82888775	82888775	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PCF11	NM_015885	exon11	c.T3897C	p.A1299A	.	.	79	6	72	0	.	23
PCGF6	84108	bcgsc.ca	37	10	105108532	105108532	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PCGF6	NM_001011663	exon3	c.C498A	p.S166R	.	.	124	7	88	0	.	226
PCM1	5108	bcgsc.ca	37	8	17794743	17794743	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PCM1	NM_006197	exon4	c.C197A	p.P66Q	.	.	87	4	143	1	.	742
PCNT	5116	bcgsc.ca	37	21	47783419	47783419	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PCNT	NM_006031	exon14	c.C2179T	p.H727Y	.	.	53	4	38	0	.	141
PCSK4	54760	broad.mit.edu;bcgsc.ca;mdanderson.org	37	19	1484037	1484037	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PCSK4	NM_017573	exon9	c.G1158A	p.A386A	.	.	33	11	28	0	.	90
PDCD6IP	10015	bcgsc.ca	37	3	33886911	33886911	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PDCD6IP	NM_001162429	exon12	c.A1487G	p.E496G	.	.	73	4	87	0	.	228
PDE10A	10846	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	165749696	165749696	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PDE10A	NM_001130690	exon21	c.G2183T	p.G728V	.	.	37	10	21	0	.	519
PDE2A	5138	bcgsc.ca	37	11	72292401	72292401	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PDE2A	NM_002599	exon23	c.A2045G	p.E682G	.	.	35	4	59	0	.	156
PDE4D	5144	bcgsc.ca	37	5	58270606	58270606	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PDE4D	NM_001104631	exon15	c.A2315G	p.D772G	.	.	79	4	81	0	.	226
PDE6C	5146	bcgsc.ca	37	10	95394598	95394598	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PDE6C	NM_006204	exon9	c.A1203G	p.G401G	.	.	91	5	113	0	.	94
PDGFC	56034	bcgsc.ca	37	4	157689035	157689035	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PDGFC	NM_016205	exon5	c.T811C	p.W271R	.	.	53	4	71	0	.	525
PDS5A	23244	bcgsc.ca	37	4	39863862	39863862	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001100399	exon26	c.T3063C	p.V1021V	.	.	133	5	136	0	.	.
PDSS2	57107	ucsc.edu	37	6	107780344	107780344	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PDSS2	NM_020381	exon1	c.G146A	p.W49X	.	.	47	5	32	0	.	92
PDZD3	79849	ucsc.edu	37	11	119057284	119057284	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PDZD3	NM_001168468	exon4	c.G215A	p.G72E	.	.	43	4	35	0	.	153
PDZRN3	23024	bcgsc.ca	37	3	73450155	73450155	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PDZRN3	NM_015009	exon5	c.C1172T	p.P391L	.	.	77	4	71	1	.	232
PER3	8863	ucsc.edu	37	1	7890055	7890055	+	Silent	SNP	T	T	A	rs11121034	byfrequency	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PER3	NM_016831	exon18	c.T3021A	p.A1007A	.	.	22	6	36	4	T|0.954;A|0.046	93
PEX13	5194	bcgsc.ca	37	2	61272982	61272982	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PEX13	NM_002618	exon3	c.C909A	p.L303L	.	.	89	6	60	0	.	91
PEX1	5189	ucsc.edu	37	7	92134103	92134103	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PEX1	NM_000466	exon12	c.G2014A	p.A672T	.	.	38	4	21	0	.	91
PEX5	5830	bcgsc.ca	37	12	7343046	7343046	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PEX5	NM_001131025	exon2	c.A73G	p.T25A	.	.	32	5	30	0	.	91
PFKFB2	5208	bcgsc.ca	37	1	207244552	207244552	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PFKFB2	NM_001018053	exon13	c.A1242G	p.R414R	.	.	126	5	67	0	.	91
PGC	5225	bcgsc.ca	37	6	41711081	41711081	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PGC	NM_002630	exon4	c.C375T	p.T125T	.	.	155	5	138	0	.	90
PHACTR4	65979	bcgsc.ca	37	1	28792895	28792895	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PHACTR4	NM_023923	exon5	c.T469C	p.S157P	.	.	54	5	62	0	.	90
PHB2	11331	bcgsc.ca	37	12	7078676	7078676	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PHB2	.	.	.	.	.	.	59	4	66	0	.	48
PHF12	57649	bcgsc.ca	37	17	27240992	27240992	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PHF12	NM_020889	exon8	c.C1198T	p.R400W	.	.	100	7	93	0	.	91
PHF16	9767	bcgsc.ca	37	X	46915487	46915487	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PHF16	NM_001077445	exon10	c.C1447A	p.R483R	.	.	197	6	192	0	.	130
PHF17	79960	bcgsc.ca	37	4	129789090	129789090	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PHF17	NM_199320	exon10	c.A1583G	p.N528S	.	.	74	4	62	0	.	90
PHF20L1	51105	bcgsc.ca	37	8	133811101	133811101	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PHF20L1	NM_016018	exon5	c.G424A	p.G142R	.	.	55	4	46	0	.	92
PHKA1	5255	bcgsc.ca	37	X	71855099	71855099	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PHKA1	NM_001172436	exon16	c.G1620T	p.V540V	.	.	140	5	139	2	.	134
PHKB	5257	bcgsc.ca	37	16	47682506	47682506	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PHKB	NM_000293	exon17	c.T1671C	p.I557I	.	.	84	5	84	0	.	154
PHKB	5257	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	47533690	47533690	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PHKB	NM_000293	exon3	c.C190G	p.Q64E	.	.	23	7	32	0	.	154
PIBF1	10464	bcgsc.ca	37	13	73357829	73357829	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PIBF1	NM_006346	exon2	c.C222T	p.I74I	.	.	116	5	124	0	.	136
PIEZO2	63895	bcgsc.ca	37	18	10696469	10696469	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_022068	exon42	c.T6557C	p.V2186A	.	.	52	4	59	0	.	.
PIGF	5281	bcgsc.ca	37	2	46819694	46819694	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PIGF	NM_002643	exon5	c.C466A	p.Q156K	.	.	59	4	47	0	.	226
PIGN	23556	bcgsc.ca	37	18	59824428	59824428	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PIGN	NM_176787	exon6	c.C376A	p.L126I	.	.	49	4	35	0	.	227
PIGZ	80235	ucsc.edu;bcgsc.ca	37	3	196678748	196678748	+	Missense_Mutation	SNP	G	G	T	rs201038840	alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PIGZ	NM_025163	exon2	c.C155A	p.P52Q	.	.	44	4	45	0	G|0.999;A|0.000	93
PIK3C2A	5286	bcgsc.ca	37	11	17113811	17113811	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PIK3C2A	NM_002645	exon28	c.G4464T	p.R1488S	.	.	112	6	94	0	.	1310
PIK3CA	5290	bcgsc.ca	37	3	178936064	178936064	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PIK3CA	NM_006218	exon10	c.A1606T	p.T536S	.	.	179	6	231	0	.	27752
PIK3CB	5291	bcgsc.ca	37	3	138409882	138409882	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PIK3CB	NM_006219	exon13	c.G1996T	p.G666C	.	.	189	7	211	0	.	1311
PIKFYVE	200576	bcgsc.ca	37	2	209217422	209217422	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PIKFYVE	NM_015040	exon39	c.T5760C	p.G1920G	.	.	45	4	33	0	.	583
PIP4K2C	79837	bcgsc.ca	37	12	57992881	57992881	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PIP4K2C	NM_001146258	exon5	c.C547A	p.P183T	.	.	90	5	62	0	.	689
PITPNA	5306	ucsc.edu	37	17	1424939	1424939	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PITPNA	NM_006224	exon11	c.A769G	p.M257V	.	.	38	4	23	0	.	227
PIWIL2	55124	bcgsc.ca	37	8	22212944	22212944	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PIWIL2	NM_001135721	exon23	c.C2848A	p.L950I	.	.	47	5	47	1	.	91
PJA2	9867	bcgsc.ca	37	5	108714515	108714515	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PJA2	NM_014819	exon4	c.G673A	p.E225K	.	.	55	4	39	0	.	92
PKHD1L1	93035	bcgsc.ca	37	8	110448590	110448590	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PKHD1L1	NM_177531	exon30	c.G3529A	p.G1177R	.	.	49	4	41	0	.	145
PKP1	5317	bcgsc.ca	37	1	201282324	201282324	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PKP1	NM_001005337	exon3	c.G337T	p.D113Y	.	.	71	5	52	0	.	92
PLCE1	51196	ucsc.edu;bcgsc.ca	37	10	95791057	95791057	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PLCE1	NM_016341	exon2	c.A254G	p.N85S	.	.	45	4	46	0	.	229
PLCE1-AS1	0	ucsc.edu	37	10	96039519	96039519	+	RNA	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	.	.	.	.	.	.	51	5	28	0	.	.
PLCG2	5336	bcgsc.ca	37	16	81925090	81925090	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PLCG2	NM_002661	exon11	c.T881C	p.L294P	.	.	79	5	52	0	.	892
PLCZ1	89869	bcgsc.ca	37	12	18841132	18841132	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PLCZ1	NM_033123	exon13	c.G1482A	p.L494L	.	.	19	3	36	0	.	228
PLEK	5341	ucsc.edu;bcgsc.ca	37	2	68607905	68607905	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PLEK	NM_002664	exon3	c.A249G	p.A83A	.	.	54	5	39	0	.	91
PLEKHH2	130271	bcgsc.ca	37	2	43947888	43947888	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PLEKHH2	NM_172069	exon16	c.G2541T	p.K847N	.	.	57	5	61	0	.	92
PLOD2	5352	bcgsc.ca	37	3	145820557	145820557	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PLOD2	NM_182943	exon7	c.A762G	p.G254G	.	.	89	4	101	0	.	92
PLS3	5358	bcgsc.ca	37	X	114879403	114879403	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PLS3	NM_005032	exon11	c.G1246T	p.V416L	.	.	54	4	42	0	.	193
PLSCR2	57047	bcgsc.ca	37	3	146171874	146171874	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PLSCR2	NM_001199978	exon7	c.C617T	p.T206I	.	.	150	5	172	0	.	90
PLXNA1	5361	bcgsc.ca	37	3	126748355	126748355	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PLXNA1	NM_032242	exon26	c.T4846C	p.F1616L	.	.	82	4	83	0	.	93
PLXNA1	5361	ucsc.edu	37	3	126749087	126749087	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PLXNA1	NM_032242	exon28	c.G5063T	p.G1688V	.	.	35	4	48	0	.	93
PLXNA1	5361	ucsc.edu;bcgsc.ca	37	3	126746843	126746843	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PLXNA1	NM_032242	exon23	c.G4423A	p.G1475S	.	.	37	4	52	0	.	93
PLXNB1	5364	bcgsc.ca	37	3	48455412	48455412	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PLXNB1	NM_001130082	exon22	c.G4278T	p.V1426V	.	.	61	4	44	0	.	293
PNPLA6	10908	ucsc.edu	37	19	7606251	7606251	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PNPLA6	NM_001166111	exon10	c.G963A	p.V321V	.	.	51	4	55	0	.	47
POLE	5426	bcgsc.ca	37	12	133234509	133234509	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	POLE	NM_006231	exon27	c.A3323G	p.H1108R	.	.	52	4	41	0	.	233
POLK	51426	broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	74892708	74892708	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	POLK	NM_016218	exon13	c.T2190C	p.S730S	.	.	44	7	36	0	.	229
POLR2A	5430	ucsc.edu;bcgsc.ca	37	17	7416382	7416382	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	POLR2A	NM_000937	exon29	c.A4799T	p.Y1600F	.	.	57	5	77	0	.	91
POLR3A	11128	bcgsc.ca	37	10	79753016	79753016	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	POLR3A	NM_007055	exon20	c.C2726T	p.P909L	.	.	85	4	65	0	.	90
POLR3B	55703	bcgsc.ca	37	12	106757662	106757662	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	POLR3B,NS,carcinoma,0	POLR3B	NM_018082	exon2	c.G87A	p.L29L	.	.	82	4	83	0	.	91
POLR3B	55703	bcgsc.ca	37	12	106831474	106831474	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	POLR3B	NM_018082	exon18	c.C1872A	p.F624L	.	.	83	4	66	0	.	91
POLR3C	10623	bcgsc.ca	37	1	145608486	145608486	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	POLR3C	NM_006468	exon3	c.T321C	p.V107V	.	.	75	4	53	0	.	91
POM121L2	94026	bcgsc.ca	37	6	27279138	27279138	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_033482	exon1	c.A812G	p.K271R	.	.	79	4	64	0	.	.
POMGNT1	55624	bcgsc.ca	37	1	46659043	46659043	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	POMGNT1	NM_017739	exon12	c.G1044A	p.V348V	.	.	51	4	46	0	.	91
POMGNT1	55624	bcgsc.ca	37	1	46660312	46660312	+	Missense_Mutation	SNP	C	C	A	rs146965084	alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	POMGNT1	NM_017739	exon8	c.G664T	p.G222W	.	.	95	5	58	0	C|1.000;T|0.000	91
POP4	10775	bcgsc.ca	37	19	30102772	30102772	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	POP4	NM_006627	exon4	c.C288T	p.Y96Y	.	.	74	4	47	0	.	226
PPFIBP1	8496	bcgsc.ca	37	12	27840395	27840395	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PPFIBP1	NM_177444	exon24	c.C2343A	p.I781I	.	.	70	4	86	0	.	228
PPIP5K2	23262	bcgsc.ca	37	5	102513600	102513600	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PPIP5K2	NM_015216	exon22	c.A2673G	p.L891L	.	.	130	6	127	0	.	92
PPL	5493	ucsc.edu;bcgsc.ca	37	16	4945347	4945347	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PPL	NM_002705	exon11	c.A1157T	p.Q386L	.	.	26	4	34	0	.	95
PPM1B	5495	bcgsc.ca	37	2	44459477	44459477	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PPM1B	NM_177968	exon6	c.C1157A	p.P386Q	.	.	193	8	193	1	.	227
PPP1CA	5499	ucsc.edu;bcgsc.ca	37	11	67166297	67166297	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PPP1CA	NM_001008709	exon6	c.A811G	p.K271E	.	.	20	4	17	0	.	659
PPP1R10	5514	ucsc.edu	37	6	30572266	30572266	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PPP1R10	NM_002714	exon13	c.G1125A	p.L375L	.	.	52	4	65	0	.	660
PPP1R12A	4659	bcgsc.ca	37	12	80202308	80202308	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PPP1R12A	NM_002480	exon11	c.C1505A	p.P502Q	.	.	71	5	53	0	.	273
PPP1R15A	23645	ucsc.edu;bcgsc.ca	37	19	49379178	49379178	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PPP1R15A	NM_014330	exon3	c.G1973A	p.R658H	.	.	56	9	64	0	.	226
PPP1R1C	151242	bcgsc.ca	37	2	182850904	182850904	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PPP1R1C	NM_001261425	exon1	c.G67A	p.E23K	.	.	62	4	36	1	.	204
PPP1R26	9858	ucsc.edu	37	9	138377784	138377784	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_014811	exon4	c.C1428T	p.D476D	.	.	23	4	20	0	.	.
PPP1R3A	5506	bcgsc.ca	37	7	113518534	113518534	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PPP1R3A	NM_002711	exon4	c.A2613G	p.T871T	.	.	80	5	85	0	.	832
PPP1R3A	5506	bcgsc.ca	37	7	113558632	113558632	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PPP1R3A	NM_002711	exon1	c.A420G	p.T140T	.	.	64	5	44	0	.	832
PPP2CA	5515	bcgsc.ca	37	5	133536750	133536750	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PPP2CA	NM_002715	exon4	c.G502A	p.G168S	.	.	64	4	56	0	.	1085
PPP3CA	5530	bcgsc.ca	37	4	101984415	101984415	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PPP3CA	NM_000944	exon9	c.G1055T	p.W352L	.	.	147	6	118	1	.	227
PPP3CB	5532	bcgsc.ca	37	10	75206269	75206269	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PPP3CB	NM_001142354	exon11	c.A1252G	p.R418G	.	.	62	4	56	0	.	226
PPP6R1	22870	bcgsc.ca	37	19	55758326	55758326	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PPP6R1	NM_014931	exon2	c.T146C	p.L49P	.	.	57	4	38	0	.	67
PPP6R3	55291	bcgsc.ca	37	11	68321629	68321629	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PPP6R3	NM_001164162	exon7	c.C635T	p.S212L	.	.	87	4	85	0	.	91
PRAM1	84106	bcgsc.ca	37	19	8563670	8563670	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_032152	exon2	c.T1022C	p.L341P	.	.	48	7	78	1	.	.
PRDM16	63976	ucsc.edu;bcgsc.ca	37	1	3350306	3350306	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PRDM16	NM_022114	exon17	c.G3762A	p.L1254L	.	.	42	4	29	0	.	660
PRG4	10216	bcgsc.ca	37	1	186280234	186280234	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PRG4	NM_005807	exon9	c.G3568T	p.G1190C	.	.	107	5	88	0	.	91
PRIM1	5557	bcgsc.ca	37	12	57144840	57144840	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_000946	exon2	c.C243A	p.G81G	.	.	58	4	78	0	.	.
PRKCG	5582	ucsc.edu;bcgsc.ca	37	19	54403529	54403529	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PRKCG	NM_002739	exon12	c.T1324C	p.L442L	.	.	32	5	29	1	.	1367
PRKDC	5591	bcgsc.ca	37	8	48746901	48746901	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PRKDC	.	.	.	.	.	.	63	4	42	0	.	1515
PRODH2	58510	bcgsc.ca	37	19	36304099	36304099	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PRODH2	NM_021232	exon1	c.G85A	p.V29I	.	.	55	4	46	0	.	92
PROM1	8842	bcgsc.ca	37	4	15985954	15985954	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PROM1	NM_006017	exon22	c.A2305G	p.K769E	.	.	59	4	42	0	.	207
PRPS2	5634	broad.mit.edu;bcgsc.ca	37	X	12838909	12838909	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PRPS2	NM_001039091	exon6	c.G860C	p.C287S	.	.	50	7	52	0	.	130
PRR23B	389151	bcgsc.ca	37	3	138738826	138738826	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PRR23B	NM_001013650	exon1	c.C678A	p.P226P	.	.	102	6	128	0	.	135
PRRC2C	23215	bcgsc.ca	37	1	171514625	171514625	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_015172	exon17	c.G4765T	p.D1589Y	.	.	86	4	93	0	.	.
PRRT2	112476	ucsc.edu;bcgsc.ca	37	16	29825202	29825202	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PRRT2	NM_001256442	exon2	c.G827T	p.C276F	.	.	40	4	44	0	.	68
PRSS3P2	154754	broad.mit.edu	37	7	142482376	142482376	+	RNA	SNP	A	A	C	rs3211359	alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	.	.	.	.	.	.	67	13	86	4	.	.
PSD3	23362	ucsc.edu;bcgsc.ca	37	8	18432732	18432732	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PSD3	NM_015310	exon13	c.C2545A	p.H849N	.	.	60	5	69	0	.	93
PSD4	23550	ucsc.edu	37	2	113951440	113951440	+	Missense_Mutation	SNP	T	T	C	rs200550699		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PSD4	NM_012455	exon10	c.T2096C	p.I699T	.	.	35	4	24	0	.	229
PSG10P	653492	bcgsc.ca	37	19	43358384	43358384	+	RNA	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	.	.	.	.	.	.	123	5	137	1	.	.
PSG3	5671	bcgsc.ca	37	19	43242957	43242957	+	Missense_Mutation	SNP	C	C	T	rs200117711	alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PSG3	NM_021016	exon2	c.G349A	p.A117T	.	.	136	6	161	1	.	92
PSMA7	5688	ucsc.edu	37	20	60714155	60714155	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PSMA7	NM_002792	exon4	c.C447A	p.P149P	.	.	26	4	20	0	.	90
PSME4	23198	bcgsc.ca	37	2	54115097	54115097	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PSME4	NM_014614	exon39	c.C4418A	p.A1473D	.	.	72	5	36	0	.	275
PSRC1	84722	bcgsc.ca	37	1	109822748	109822748	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PSRC1	NM_001005290	exon8	c.C928A	p.Q310K	.	.	143	5	107	0	.	90
PTBP2	58155	bcgsc.ca	37	1	97235320	97235320	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PTBP2	NM_021190	exon4	c.T177C	p.R59R	.	.	157	5	176	0	.	90
PTCD2	79810	bcgsc.ca	37	5	71630880	71630880	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PTCD2	NM_024754	exon5	c.C504A	p.F168L	.	.	225	6	130	0	.	90
PTDSS1	9791	bcgsc.ca	37	8	97345737	97345737	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PTDSS1	NM_014754	exon13	c.C1365T	p.S455S	.	.	108	6	84	1	.	91
PTPN14	5784	bcgsc.ca	37	1	214571257	214571257	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PTPN14	NM_005401	exon8	c.A757G	p.R253G	.	.	64	4	48	0	.	290
PTPRF	5792	bcgsc.ca	37	1	44044523	44044523	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PTPRF	NM_130440	exon7	c.A611G	p.K204R	.	.	34	4	52	0	.	232
PTPRZ1	5803	bcgsc.ca	37	7	121568234	121568234	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PTPRZ1	NM_001206838	exon2	c.A83G	p.Q28R	.	.	99	5	143	0	.	699
PTS	5805	bcgsc.ca	37	11	112103951	112103951	+	Silent	SNP	G	G	T	rs11541630		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PTS	NM_000317	exon5	c.G309T	p.V103V	.	.	145	6	139	0	G|1.000;|0.000	90
PUM1	9698	bcgsc.ca	37	1	31468013	31468013	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PUM1	NM_014676	exon6	c.G775T	p.G259C	.	.	196	6	245	1	.	92
PXK	54899	bcgsc.ca	37	3	58382915	58382915	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	PXK	NM_017771	exon10	c.C972T	p.F324F	.	.	55	4	55	0	.	334
QKI	9444	bcgsc.ca	37	6	163876439	163876439	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	QKI	NM_206853	exon2	c.A271G	p.K91E	.	.	115	5	123	1	.	290
QRICH2	84074	bcgsc.ca	37	17	74287591	74287591	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	QRICH2	NM_032134	exon4	c.C2719A	p.P907T	.	.	97	5	40	0	.	94
RAB34	83871	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	27041897	27041897	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RAB34	NM_001144943	exon10	c.T797C	p.F266S	.	.	41	12	26	0	.	227
RAB3GAP1	22930	broad.mit.edu;bcgsc.ca	37	2	135872950	135872950	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RAB3GAP1	NM_001172435	exon7	c.T647C	p.I216T	.	.	160	6	90	0	.	92
RAB3GAP2	25782	bcgsc.ca	37	1	220363842	220363842	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RAB3GAP2	NM_012414	exon15	c.A1508T	p.K503I	.	.	57	4	42	0	.	90
RAB3IP	117177	bcgsc.ca	37	12	70149229	70149229	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RAB3IP	NM_175623	exon2	c.T89C	p.L30P	.	.	96	4	103	0	.	227
RAB7L1	8934	bcgsc.ca	37	1	205740628	205740628	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	RAB7L1,NS,carcinoma,0	RAB7L1	NM_001135662	exon4	c.C350A	p.P117Q	.	.	88	4	63	0	.	228
RABGGTB	5876	bcgsc.ca	37	1	76259773	76259773	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RABGGTB	NM_004582	exon8	c.C710T	p.P237L	.	.	73	4	57	0	.	227
RAC1	5879	bcgsc.ca	37	7	6431584	6431584	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RAC1	NM_006908	exon3	c.T137C	p.V46A	.	.	94	5	122	0	.	659
RAD51	5888	bcgsc.ca	37	15	41023252	41023252	+	Splice_Site	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RAD51	NM_133487	exon10	c.900-1G>T	.	.	.	55	4	70	0	.	563
RAP1GDS1	5910	bcgsc.ca	37	4	99355183	99355183	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RAP1GDS1	NM_001100426	exon13	c.G1540T	p.A514S	.	.	88	4	69	0	.	660
RAPGEF6	51735	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	130841171	130841171	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RAPGEF6	NM_001164387	exon10	c.T987A	p.S329R	.	.	114	20	70	0	.	661
RAPGEF6	51735	bcgsc.ca	37	5	130764662	130764662	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RAPGEF6	NM_001164386	exon28	c.G4737T	p.Q1579H	.	.	123	5	88	0	.	661
RAPGEFL1	51195	bcgsc.ca	37	17	38340879	38340879	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RAPGEFL1	NM_016339	exon4	c.T164C	p.L55P	.	.	66	4	51	0	.	229
RAPH1	65059	bcgsc.ca	37	2	204354323	204354323	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	RAPH1,brain,glioma,+1	RAPH1	NM_213589	exon4	c.G716A	p.G239E	.	.	45	4	32	0	.	1151
RARG	5916	bcgsc.ca	37	12	53609106	53609106	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RARG	NM_000966	exon5	c.A446G	p.K149R	.	.	51	4	37	0	.	722
RASA1	5921	bcgsc.ca	37	5	86665665	86665665	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RASA1	NM_002890	exon12	c.G1646T	p.S549I	.	.	229	6	138	0	.	661
RASAL1	8437	bcgsc.ca	37	12	113538458	113538458	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RASAL1	NM_001193520	exon21	c.G2256A	p.M752I	.	.	65	4	42	0	.	229
RASAL2	9462	bcgsc.ca	37	1	178389675	178389675	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RASAL2	NM_170692	exon5	c.C594A	p.S198S	.	.	100	5	104	0	.	155
RASAL2	9462	bcgsc.ca	37	1	178411857	178411857	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RASAL2	NM_170692	exon8	c.A975G	p.E325E	.	.	57	4	55	0	.	155
RASAL2	9462	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	178420786	178420786	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RASAL2	NM_170692	exon10	c.G1708A	p.D570N	.	.	54	19	66	0	.	155
RASAL2	9462	ucsc.edu	37	1	178427577	178427577	+	Silent	SNP	C	C	T	rs201134051		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RASAL2	NM_170692	exon14	c.C3150T	p.A1050A	.	.	29	4	20	0	C|0.999;T|0.001	155
RBM25	58517	bcgsc.ca	37	14	73566426	73566426	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RBM25	NM_021239	exon9	c.C835A	p.R279R	.	.	89	4	92	1	.	91
RBM39	9584	bcgsc.ca	37	20	34309685	34309685	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RBM39	NM_184234	exon9	c.G802T	p.G268W	.	.	125	5	113	0	.	91
RBM41	55285	bcgsc.ca	37	X	106358787	106358787	+	Splice_Site	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RBM41	NM_001171080	exon5	c.319-1G>A	.	.	.	79	4	66	0	.	131
RCBTB1	55213	bcgsc.ca	37	13	50140796	50140796	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RCBTB1	NM_018191	exon4	c.C235A	p.L79I	.	.	79	4	82	0	.	91
RDH12	145226	bcgsc.ca	37	14	68189402	68189402	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RDH12	NM_152443	exon3	c.C43A	p.L15M	.	.	131	5	137	0	.	91
RECK	8434	bcgsc.ca	37	9	36100336	36100336	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RECK	NM_021111	exon11	c.A1094G	p.E365G	.	.	81	4	88	0	.	93
REV1	51455	bcgsc.ca	37	2	100065838	100065838	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	REV1	NM_001037872	exon4	c.A310G	p.K104E	.	.	74	5	67	0	.	92
REV1	51455	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	2	100019252	100019253	+	Frame_Shift_Del	DEL	AG	AG	-	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	AG	AG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	REV1	NM_016316	exon21	c.3395_3396del	p.1132_1132del	.	.	64	21	32	0	.	92
REV3L	5980	bcgsc.ca	37	6	111711353	111711353	+	Silent	SNP	C	C	T	rs1053911	alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	REV3L	NM_002912	exon6	c.G693A	p.Q231Q	.	.	158	5	133	0	C|1.000;|0.000	294
REV3L	5980	ucsc.edu;bcgsc.ca	37	6	111709275	111709275	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	REV3L	NM_002912	exon8	c.G876T	p.V292V	.	.	41	4	38	0	.	294
RFWD3	55159	bcgsc.ca	37	16	74678341	74678341	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RFWD3	NM_018124	exon6	c.A998G	p.K333R	.	.	72	4	82	0	.	522
RFX6	222546	bcgsc.ca	37	6	117239202	117239202	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RFX6	NM_173560	exon10	c.T975C	p.V325V	.	.	58	4	45	0	.	93
RFX7	64864	bcgsc.ca	37	15	56385957	56385957	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RFX7	NM_022841	exon9	c.C3969A	p.T1323T	.	.	157	8	114	0	.	90
RGS8	85397	bcgsc.ca	37	1	182616053	182616053	+	Splice_Site	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RGS8	NM_001102450	exon8	c.361-1G>T	.	.	.	89	5	75	0	.	227
RHEBL1	121268	bcgsc.ca	37	12	49460260	49460260	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RHEBL1	NM_144593	exon5	c.C331A	p.R111R	.	.	135	6	142	0	.	659
RHOF	54509	bcgsc.ca	37	12	122231115	122231115	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RHOF	NM_019034	exon2	c.A169G	p.T57A	.	.	52	5	53	0	.	660
RIC8B	55188	ucsc.edu;bcgsc.ca	37	12	107254187	107254187	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RIC8B	NM_018157	exon8	c.C1448A	p.P483Q	.	.	39	4	53	0	.	91
RIMS4	140730	ucsc.edu;bcgsc.ca	37	20	43384815	43384815	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RIMS4	NM_001205317	exon6	c.C773T	p.S258F	.	.	44	6	33	0	.	94
RIN1	9610	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	66101485	66101485	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RIN1	NM_004292	exon7	c.T1496C	p.L499P	.	.	57	9	46	0	.	710
RIN2	54453	bcgsc.ca	37	20	19977464	19977464	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RIN2	NM_001242581	exon11	c.T2489C	p.I830T	.	.	58	5	50	1	.	660
RIN3	79890	bcgsc.ca	37	14	93107640	93107640	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RIN3	NM_024832	exon5	c.C498A	p.F166L	.	.	51	4	54	0	.	522
RIOK1	83732	bcgsc.ca	37	6	7398962	7398962	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RIOK1	NM_031480	exon5	c.A469G	p.T157A	.	.	143	6	173	0	.	336
RIOK2	55781	bcgsc.ca	37	5	96506992	96506992	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RIOK2	NM_001159749	exon6	c.A697T	p.N233Y	.	.	91	5	49	0	.	419
RIT1	6016	bcgsc.ca	37	1	155874522	155874522	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RIT1	NM_001256821	exon4	c.G288T	p.Q96H	.	.	75	4	47	1	.	659
RLIM	51132	broad.mit.edu;bcgsc.ca	37	X	73812528	73812528	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RLIM	NM_183353	exon5	c.622delC	p.Q208fs	.	.	68	9	73	0	.	228
RNF113A	7737	bcgsc.ca	37	X	119004985	119004985	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RNF113A	NM_006978	exon1	c.C592A	p.Q198K	.	.	58	4	36	1	.	129
RNF123	63891	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	49738928	49738928	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RNF123	NM_022064	exon16	c.G1282T	p.D428Y	.	.	37	12	32	0	.	584
RNF139	11236	bcgsc.ca	37	8	125499780	125499780	+	Missense_Mutation	SNP	C	C	A	rs79338669	byfrequency;alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RNF139	NM_007218	exon2	c.C1890A	p.N630K	.	.	83	5	58	0	C|0.994;T|0.006	226
RNF20	56254	bcgsc.ca	37	9	104324232	104324232	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RNF20	NM_019592	exon19	c.A2690G	p.K897R	.	.	146	6	109	0	.	231
RNF38	152006	bcgsc.ca	37	9	36356397	36356397	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RNF38	NM_022781	exon6	c.C812A	p.P271Q	.	.	128	6	104	0	.	650
RNF41	10193	bcgsc.ca	37	12	56600405	56600405	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RNF41	NM_005785	exon7	c.C780A	p.A260A	.	.	77	4	61	0	.	226
RNF7	9616	bcgsc.ca	37	3	141457336	141457336	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RNF7	NM_014245	exon1	c.C153T	p.A51A	.	.	58	4	67	0	.	226
RNU6-76	100873777	bcgsc.ca	37	16	33500915	33500915	+	RNA	SNP	T	T	A	rs4079164	byfrequency	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	.	.	.	.	.	.	19	6	23	2	T|0.357;C|0.143;A|0.500	.
ROBO2	6092	bcgsc.ca	37	3	77542438	77542438	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ROBO2	NM_002942	exon5	c.G711A	p.L237L	.	.	52	4	51	0	.	328
ROCK2	9475	bcgsc.ca	37	2	11375945	11375945	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ROCK2	NM_004850	exon5	c.G606T	p.L202L	.	.	190	8	152	0	.	546
ROR1	4919	bcgsc.ca	37	1	64515652	64515652	+	Splice_Site	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ROR1	NM_005012	exon3	c.451+2T>C	.	.	.	41	4	34	0	.	1536
ROR1	4919	bcgsc.ca	37	1	64516361	64516361	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ROR1	NM_001083592	exon4	c.C455A	p.P152H	.	.	256	7	230	0	.	1536
RP1	6101	bcgsc.ca	37	8	55534808	55534808	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RP1	NM_006269	exon3	c.T747C	p.R249R	.	.	70	4	58	0	.	102
RPGR	6103	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	38144823	38144823	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RPGR	NM_001034853	exon15	c.T3429G	p.N1143K	.	.	176	40	181	1	.	131
RPL17-C18orf32	100526842	bcgsc.ca	37	18	47016841	47016841	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001199355	exon4	c.A298G	p.S100G	.	.	111	5	89	0	.	.
RPL41	6171	bcgsc.ca	37	12	56511279	56511279	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RPL41	NM_001035267	exon3	c.A49G	p.R17G	.	.	130	5	112	0	.	68
RPS6KB2	6199	bcgsc.ca	37	11	67198912	67198912	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RPS6KB2	NM_003952	exon5	c.A383G	p.H128R	.	.	47	4	48	0	.	1000
RSF1	51773	ucsc.edu;bcgsc.ca	37	11	77378439	77378439	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RSF1	NM_016578	exon16	c.A3849G	p.E1283E	.	.	42	4	41	0	.	93
RSG1	79363	bcgsc.ca	37	1	16559090	16559090	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RSG1	NM_030907	exon4	c.C442A	p.R148S	.	.	49	4	64	0	.	228
RTFDC1	51507	bcgsc.ca	37	20	55049821	55049821	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_016407	exon3	c.C252A	p.S84R	.	.	60	4	36	0	.	.
RTN4	57142	bcgsc.ca	37	2	55214738	55214738	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RTN4	NM_020532	exon4	c.T3110A	p.V1037E	.	.	90	5	55	0	.	155
RTTN	25914	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	18	67871371	67871371	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RTTN	NM_173630	exon3	c.T348C	p.P116P	.	.	85	13	97	1	.	141
RUFY2	55680	bcgsc.ca	37	10	70141006	70141006	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RUFY2	NM_017987	exon11	c.A1195G	p.M399V	.	.	107	5	92	0	.	91
RUNDC3B	154661	bcgsc.ca	37	7	87399954	87399954	+	Missense_Mutation	SNP	C	C	A	rs141708572	alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RUNDC3B	NM_138290	exon8	c.C738A	p.S246R	.	.	99	5	81	0	C|1.000;T|0.000	69
RUNX1T1	862	bcgsc.ca	37	8	93029462	93029462	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RUNX1T1	NM_001198679	exon3	c.C395A	p.P132Q	.	.	149	8	137	2	.	1196
RUVBL2	10856	bcgsc.ca	37	19	49502596	49502596	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RUVBL2	NM_006666	exon2	c.G33T	p.P11P	.	.	65	4	57	0	.	227
RYR1	6261	bcgsc.ca	37	19	39009858	39009858	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RYR1	NM_001042723	exon67	c.C10023A	p.F3341L	.	.	51	5	43	0	.	100
RYR2	6262	bcgsc.ca	37	1	237494239	237494239	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RYR2	NM_001035	exon3	c.C230T	p.A77V	.	.	46	4	42	0	.	158
RYR3	6263	bcgsc.ca	37	15	34015080	34015080	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	RYR3	NM_001243996	exon44	c.G6784A	p.G2262R	.	.	59	4	76	0	.	520
SACS	26278	bcgsc.ca	37	13	23909803	23909803	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SACS	NM_014363	exon10	c.C8212A	p.L2738I	.	.	64	4	40	0	.	298
SAMM50	25813	bcgsc.ca	37	22	44372006	44372006	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SAMM50	NM_015380	exon8	c.G720T	p.R240S	.	.	105	6	68	2	.	91
SAPCD1	401251	bcgsc.ca	37	6	31730923	31730923	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001039651	exon1	c.G92A	p.G31E	.	.	81	5	76	0	.	.
SATL1	340562	bcgsc.ca	37	X	84363959	84363959	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SATL1	NM_001012980	exon1	c.A16G	p.T6A	.	.	213	6	227	0	.	175
SAV1	60485	broad.mit.edu	37	14	51131998	51131998	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SAV1	NM_021818	exon2	c.A434G	p.K145R	.	.	376	6	379	0	.	658
SBF2	81846	bcgsc.ca	37	11	10014062	10014062	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SBF2	NM_030962	exon12	c.T1196C	p.V399A	.	.	146	5	161	1	.	93
SCAMP2	10066	bcgsc.ca	37	15	75142882	75142882	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SCAMP2	NM_005697	exon6	c.G605T	p.W202L	.	.	43	4	43	1	.	91
SCAMP4	113178	broad.mit.edu	37	19	1918958	1918958	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SCAMP4	NM_079834	exon5	c.C364T	p.Q122X	.	.	118	8	112	0	.	68
SCN5A	6331	bcgsc.ca	37	3	38639260	38639260	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SCN5A	NM_001160160	exon14	c.T2222C	p.M741T	.	.	59	4	37	0	.	98
SCN7A	6332	bcgsc.ca	37	2	167277803	167277803	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SCN7A	NM_002976	exon19	c.T3032C	p.F1011S	.	.	129	5	117	0	.	67
SCN9A	6335	bcgsc.ca	37	2	167149840	167149840	+	Silent	SNP	G	G	A	rs200189279		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SCN9A	NM_002977	exon9	c.C1008T	p.N336N	.	.	63	4	56	0	.	181
SCNN1A	6337	bcgsc.ca	37	12	6471335	6471335	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SCNN1A	NM_001159576	exon3	c.C934A	p.R312S	.	.	55	4	56	0	.	90
SCPEP1	59342	bcgsc.ca	37	17	55058503	55058503	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SCPEP1	NM_021626	exon2	c.G137T	p.R46L	.	.	82	5	76	0	.	91
SDCBP2	27111	ucsc.edu	37	20	1300264	1300264	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SDCBP2	NM_080489	exon3	c.G94A	p.V32I	.	.	47	4	32	0	.	154
SDE2	163859	bcgsc.ca	37	1	226173111	226173111	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_152608	exon7	c.G1248T	p.G416G	.	.	105	6	94	1	.	.
SDE2	163859	ucsc.edu	37	1	226180179	226180179	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_152608	exon4	c.C440A	p.P147H	.	.	30	5	20	0	.	.
SEC23A	10484	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	39524374	39524374	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SEC23A	NM_006364	exon14	c.G1632T	p.R544S	.	.	96	21	83	0	.	95
SEC24D	9871	ucsc.edu	37	4	119673874	119673874	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SEC24D	NM_014822	exon12	c.G1591T	p.E531X	.	.	34	4	33	0	.	90
SEC63	11231	bcgsc.ca	37	6	108202453	108202453	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SEC63	NM_007214	exon18	c.A1835G	p.E612G	.	.	69	4	70	0	.	227
SEC63	11231	bcgsc.ca	37	6	108227661	108227661	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SEC63	NM_007214	exon10	c.C952A	p.L318I	.	.	69	4	74	0	.	227
SELK	0	bcgsc.ca	37	3	53919882	53919882	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	.	.	.	.	.	.	148	8	154	1	.	.
SEMA3E	9723	ucsc.edu;bcgsc.ca	37	7	83026017	83026017	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SEMA3E	NM_012431	exon12	c.A1395G	p.T465T	.	.	49	4	36	0	.	93
SEMA3F	6405	ucsc.edu;bcgsc.ca	37	3	50223132	50223132	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SEMA3F	NM_004186	exon15	c.T1579C	p.S527P	.	.	45	4	45	0	.	279
SEMA6D	80031	bcgsc.ca	37	15	48063274	48063274	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SEMA6D	NM_153618	exon19	c.C2514T	p.N838N	.	.	82	4	54	0	.	138
SENP6	26054	bcgsc.ca	37	6	76385657	76385657	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	SENP6,NS,carcinoma,0	SENP6	NM_015571	exon13	c.C1508A	p.P503H	.	.	90	5	71	0	.	660
SEPHS1	22929	ucsc.edu;bcgsc.ca	37	10	13371747	13371747	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SEPHS1	NM_001195604	exon6	c.A602G	p.K201R	.	.	40	5	37	0	.	116
SEPP1	6414	bcgsc.ca	37	5	42800832	42800832	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SEPP1	.	.	.	.	.	.	70	4	57	0	.	68
SEPT8	23176	ucsc.edu	37	5	132097243	132097243	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SEPT8	NM_015146	exon7	c.A869G	p.E290G	.	.	56	4	50	0	.	70
SERAC1	84947	bcgsc.ca	37	6	158535885	158535885	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SERAC1	NM_032861	exon15	c.T1620C	p.A540A	.	.	42	4	53	0	.	90
SERAC1	84947	bcgsc.ca	37	6	158535971	158535971	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SERAC1	NM_032861	exon15	c.T1534C	p.S512P	.	.	48	4	44	0	.	90
SERPINA10	51156	ucsc.edu;bcgsc.ca	37	14	94752572	94752572	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SERPINA10	NM_001100607	exon4	c.A1016G	p.K339R	.	.	48	8	36	0	.	228
SERPINB10	5273	bcgsc.ca	37	18	61587085	61587085	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SERPINB10	NM_005024	exon4	c.G436T	p.A146S	.	.	56	4	62	0	.	227
SERPINB5	5268	bcgsc.ca	37	18	61151721	61151721	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SERPINB5	NM_002639	exon2	c.T60C	p.C20C	.	.	65	5	67	0	.	651
SERPINB8	5271	bcgsc.ca	37	18	61650910	61650910	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SERPINB8	NM_001031848	exon5	c.A522G	p.Q174Q	.	.	75	4	76	0	.	226
SERTAD4	56256	bcgsc.ca	37	1	210415034	210415034	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SERTAD4	NM_019605	exon4	c.A423G	p.G141G	.	.	76	4	41	0	.	92
SESN1	27244	bcgsc.ca	37	6	109311914	109311914	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SESN1	NM_014454	exon8	c.A1358G	p.K453R	.	.	89	6	79	0	.	227
SESTD1	91404	bcgsc.ca	37	2	179988488	179988488	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SESTD1	NM_178123	exon12	c.G1236T	p.S412S	.	.	140	6	105	1	.	228
SETD3	84193	ucsc.edu	37	14	99871645	99871645	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SETD3	NM_032233	exon10	c.G988T	p.D330Y	.	.	43	4	39	0	.	514
SETD5	55209	bcgsc.ca	37	3	9482191	9482191	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SETD5	NM_001080517	exon8	c.G619A	p.E207K	.	.	93	4	88	0	.	70
SETX	23064	bcgsc.ca	37	9	135156919	135156919	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SETX	NM_015046	exon20	c.C6589T	p.H2197Y	.	.	75	5	83	0	.	93
SETX	23064	bcgsc.ca	37	9	135204670	135204670	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SETX	NM_015046	exon10	c.T2315C	p.L772P	.	.	214	6	195	0	.	93
SFXN3	81855	bcgsc.ca	37	10	102794524	102794524	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SFXN3	NM_030971	exon3	c.C85A	p.R29R	.	.	67	4	57	0	.	91
SGCA	6442	bcgsc.ca	37	17	48245345	48245345	+	Missense_Mutation	SNP	G	G	T	rs117672945	alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SGCA	NM_001135697	exon4	c.G350T	p.R117L	.	.	58	4	36	0	G|1.000;A|0.000	92
SGCD	6444	bcgsc.ca	37	5	156186269	156186269	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_000337	exon9	c.T741C	p.P247P	.	.	78	5	45	0	.	.
SH3BP5-AS1	100505696	ucsc.edu	37	3	15298325	15298325	+	RNA	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	.	.	.	.	.	.	25	4	20	0	.	.
SH3TC1	54436	bcgsc.ca	37	4	8229879	8229879	+	Missense_Mutation	SNP	G	G	A	rs75095706	byfrequency	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	SH3TC1,NS,NS,-1	SH3TC1	NM_018986	exon12	c.G2458A	p.G820R	.	.	57	4	42	0	G|0.982;A|0.018	154
SHCBP1	79801	bcgsc.ca	37	16	46651587	46651587	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SHCBP1	NM_024745	exon3	c.C346A	p.R116R	.	.	45	4	45	0	.	154
SHCBP1	79801	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	46615855	46615855	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SHCBP1	NM_024745	exon13	c.C1805T	p.T602I	.	.	96	23	110	1	.	154
SHD	56961	ucsc.edu;bcgsc.ca	37	19	4280289	4280289	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SHD	NM_020209	exon1	c.C229A	p.R77R	.	.	42	4	35	0	.	90
SIDT1	54847	bcgsc.ca	37	3	113299530	113299530	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SIDT1	NM_017699	exon5	c.T637C	p.S213P	.	.	87	5	77	0	.	95
SIGLEC6	946	bcgsc.ca	37	19	52023482	52023482	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SIGLEC6	NM_001245	exon8	c.A1216G	p.I406V	.	.	48	4	51	0	.	91
SIPA1L1	26037	bcgsc.ca	37	14	72055399	72055399	+	Missense_Mutation	SNP	G	G	T	rs143993885	alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SIPA1L1	NM_015556	exon2	c.G810T	p.E270D	.	.	61	4	84	0	G|1.000;C|0.000	156
SIRT7	51547	ucsc.edu	37	17	79872038	79872038	+	Silent	SNP	T	T	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SIRT7	NM_016538	exon8	c.A822T	p.L274L	.	.	45	4	16	0	.	204
SKAP1	8631	bcgsc.ca	37	17	46423337	46423337	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SKAP1	NM_003726	exon4	c.T210A	p.D70E	.	.	35	4	35	0	.	90
SKIL	6498	bcgsc.ca	37	3	170078237	170078237	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SKIL	NM_001248008	exon1	c.G118A	p.G40R	.	.	121	5	83	0	.	228
SLAIN2	57606	bcgsc.ca	37	4	48381825	48381825	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_020846	exon4	c.T822C	p.D274D	.	.	153	5	174	0	.	.
SLC12A1	6557	bcgsc.ca	37	15	48527102	48527102	+	Silent	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SLC12A1	NM_001184832	exon9	c.A1116T	p.P372P	.	.	63	4	64	0	.	24
SLC12A1	6557	ucsc.edu	37	15	48500196	48500196	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SLC12A1	NM_001184832	exon2	c.A280G	p.N94D	.	.	44	4	61	0	.	24
SLC14A2	8170	bcgsc.ca	37	18	43217012	43217012	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SLC14A2	NM_001242692	exon7	c.C708A	p.F236L	.	.	107	6	89	0	.	93
SLC15A3	51296	bcgsc.ca	37	11	60714174	60714174	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SLC15A3	NM_016582	exon2	c.C678T	p.F226F	.	.	36	4	37	0	.	90
SLC16A2	6567	bcgsc.ca	37	X	73749109	73749109	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SLC16A2	NM_006517	exon5	c.G1232T	p.G411V	.	.	114	5	160	0	.	194
SLC16A9	220963	bcgsc.ca	37	10	61413638	61413638	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SLC16A9	NM_194298	exon5	c.G1146A	p.M382I	.	.	46	4	37	0	.	93
SLC17A7	57030	bcgsc.ca	37	19	49938473	49938473	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SLC17A7	NM_020309	exon3	c.T386C	p.V129A	.	.	62	4	63	0	.	517
SLC19A2	10560	bcgsc.ca	37	1	169437969	169437969	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SLC19A2	NM_006996	exon4	c.T1136C	p.I379T	.	.	115	6	94	1	.	90
SLC22A16	85413	bcgsc.ca	37	6	110757110	110757110	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SLC22A16	NM_033125	exon6	c.G1366A	p.A456T	.	.	56	4	48	0	.	91
SLC24A2	25769	bcgsc.ca	37	9	19516189	19516189	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SLC24A2	NM_020344	exon10	c.C1948A	p.L650I	.	.	78	4	78	1	.	517
SLC25A51	92014	bcgsc.ca	37	9	37887893	37887893	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_033412	exon3	c.G655T	p.G219C	.	.	183	7	193	3	.	.
SLC26A3	1811	bcgsc.ca	37	7	107408063	107408063	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SLC26A3	NM_000111	exon20	c.C2232A	p.T744T	.	.	78	5	85	0	.	94
SLC27A3	11000	bcgsc.ca	37	1	153749571	153749571	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SLC27A3	NM_024330	exon3	c.A1052G	p.K351R	.	.	82	4	51	0	.	91
SLC28A3	64078	ucsc.edu	37	9	86901022	86901022	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SLC28A3	NM_001199633	exon13	c.T1285C	p.S429P	.	.	37	4	25	0	.	94
SLC34A1	6569	bcgsc.ca	37	5	176820699	176820699	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SLC34A1	NM_003052	exon9	c.C941A	p.P314H	.	.	71	5	51	0	.	91
SLC37A3	84255	bcgsc.ca	37	7	140045676	140045676	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SLC37A3	NM_207113	exon11	c.G1119A	p.G373G	.	.	80	4	72	0	.	93
SLC38A2	54407	ucsc.edu;bcgsc.ca	37	12	46756885	46756885	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SLC38A2	NM_018976	exon13	c.G1098T	p.L366F	.	.	40	5	47	0	.	226
SLC39A10	57181	bcgsc.ca	37	2	196573533	196573533	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SLC39A10	NM_020342	exon5	c.T1540C	p.C514R	.	.	100	4	77	0	.	92
SLC41A2	84102	bcgsc.ca	37	12	105255101	105255101	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SLC41A2	NM_032148	exon7	c.T1223C	p.V408A	.	.	92	5	90	0	.	92
SLC44A5	204962	bcgsc.ca	37	1	75716946	75716946	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SLC44A5	NM_152697	exon7	c.A294T	p.L98F	.	.	67	5	43	0	.	95
SLC4A1	6521	bcgsc.ca	37	17	42333068	42333068	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SLC4A1	NM_000342	exon14	c.C1773T	p.F591F	.	.	62	4	39	0	.	92
SLC4A9	83697	bcgsc.ca	37	5	139744097	139744097	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SLC4A9	NM_001258428	exon11	c.T1610C	p.L537P	.	.	83	5	50	0	.	67
SLC5A12	159963	bcgsc.ca	37	11	26719960	26719960	+	Missense_Mutation	SNP	G	G	A	rs180785826	by1000genomes	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SLC5A12	NM_178498	exon7	c.C944T	p.P315L	.	.	77	4	83	0	G|1.000;A|0.000	92
SLC6A12	6539	bcgsc.ca	37	12	306642	306642	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SLC6A12	NM_001122848	exon10	c.A976G	p.N326D	.	.	70	4	88	0	.	91
SLC6A4	6532	bcgsc.ca	37	17	28544285	28544285	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SLC6A4	NM_001045	exon6	c.C736A	p.Q246K	.	.	59	4	33	0	.	94
SLC6A9	6536	ucsc.edu;bcgsc.ca	37	1	44466893	44466893	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SLC6A9	NM_201649	exon10	c.T1497C	p.Y499Y	.	.	44	4	52	1	.	90
SLC8A2	6543	bcgsc.ca	37	19	47960775	47960775	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SLC8A2	NM_015063	exon3	c.T752C	p.L251P	.	.	26	4	34	0	.	94
SLC9C2	284525	bcgsc.ca	37	1	173502925	173502925	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_178527	exon17	c.G1986T	p.L662F	.	.	86	4	66	1	.	.
SLCO1A2	6579	bcgsc.ca	37	12	21448571	21448571	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SLCO1A2	NM_134431	exon11	c.G1231A	p.E411K	.	.	107	5	133	1	.	157
SLCO1A2	6579	bcgsc.ca	37	12	21471786	21471786	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SLCO1A2	NM_134431	exon4	c.C132T	p.L44L	.	.	62	5	67	0	.	157
SLITRK3	22865	bcgsc.ca	37	3	164907961	164907961	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SLITRK3	NM_014926	exon2	c.A658G	p.I220V	.	.	81	5	76	0	.	100
SMAD1	4086	bcgsc.ca	37	4	146479067	146479067	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SMAD1	NM_005900	exon7	c.C1379A	p.P460H	.	.	77	5	71	1	.	415
SMARCA2	6595	bcgsc.ca	37	9	2081924	2081924	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SMARCA2	NM_139045	exon15	c.C2277T	p.T759T	.	.	61	4	37	0	.	653
SMARCA4	6597	ucsc.edu;bcgsc.ca	37	19	11118666	11118666	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SMARCA4	NM_003072	exon14	c.A2090G	p.D697G	.	.	45	4	43	0	.	1523
SMARCAD1	56916	bcgsc.ca	37	4	95196114	95196114	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SMARCAD1	NM_001128429	exon14	c.C1806A	p.T602T	.	.	50	4	50	0	.	229
SMARCD1	6602	bcgsc.ca	37	12	50481243	50481243	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SMARCD1	NM_003076	exon5	c.G629T	p.R210L	.	.	109	6	104	0	.	228
SMC3	9126	bcgsc.ca	37	10	112361505	112361505	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SMC3	NM_005445	exon24	c.A2755G	p.T919A	.	.	62	4	51	0	.	92
SMG1	23049	bcgsc.ca	37	16	18847253	18847253	+	Splice_Site	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SMG1	NM_015092	exon49	c.8057+2T>C	.	.	.	54	4	59	0	.	1160
SMURF1	57154	bcgsc.ca	37	7	98654853	98654853	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SMURF1	NM_020429	exon5	c.T378C	p.T126T	.	.	69	4	75	0	.	661
SMURF2	64750	bcgsc.ca	37	17	62558906	62558906	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SMURF2	NM_022739	exon11	c.A1195G	p.R399G	.	.	120	5	99	0	.	661
SNRNP48	154007	bcgsc.ca	37	6	7594335	7594335	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SNRNP48	NM_152551	exon3	c.G274A	p.E92K	.	.	150	6	150	0	.	90
SNRNP48	154007	bcgsc.ca	37	6	7605644	7605644	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SNRNP48	NM_152551	exon7	c.T731C	p.V244A	.	.	56	4	61	0	.	90
SNX14	57231	ucsc.edu;bcgsc.ca	37	6	86303303	86303303	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SNX14	NM_153816	exon1	c.T134C	p.L45P	.	.	45	4	34	0	.	226
SNX2	6643	bcgsc.ca	37	5	122152690	122152690	+	Silent	SNP	C	C	T	rs139541395	byfrequency	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SNX2	NM_003100	exon9	c.C879T	p.N293N	.	.	89	4	56	0	C|0.997;T|0.003	226
SOS1	6654	bcgsc.ca	37	2	39294858	39294858	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SOS1	NM_005633	exon2	c.G124T	p.D42Y	.	.	106	5	80	0	.	851
SPATA31D1	389763	bcgsc.ca	37	9	84608574	84608574	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001001670	exon4	c.C3189A	p.T1063T	.	.	54	4	59	0	.	.
SPECC1	92521	bcgsc.ca	37	17	20108127	20108127	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SPECC1	NM_001033553	exon4	c.C765A	p.I255I	.	.	61	4	87	0	.	639
SPEN	23013	bcgsc.ca	37	1	16257359	16257359	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SPEN	NM_015001	exon11	c.C4624A	p.R1542R	.	.	95	5	116	0	.	298
SPG11	80208	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	44943731	44943731	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SPG11	NM_025137	exon6	c.G1414T	p.V472L	.	.	42	8	50	0	.	95
SPINK6	404203	bcgsc.ca	37	5	147582672	147582672	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SPINK6	NM_205841	exon1	c.G13T	p.G5C	.	.	105	4	120	1	.	91
SPIRE1	56907	bcgsc.ca	37	18	12479754	12479754	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SPIRE1	NM_001128626	exon10	c.C1348A	p.R450R	.	.	61	4	47	0	.	90
SPRR3	6707	mdanderson.org	37	1	152975715	152975715	+	Silent	SNP	C	C	T	rs63405761	byfrequency	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SPRR3	NM_001097589	exon2	c.C219T	p.G73G	.	.	29	15	32	0	A|0.000;C|0.697;T|0.303	45
SPTAN1	6709	bcgsc.ca	37	9	131345115	131345115	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SPTAN1	NM_003127	exon14	c.A1793G	p.D598G	.	.	32	4	35	0	.	158
SPTY2D1	144108	bcgsc.ca	37	11	18637061	18637061	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SPTY2D1	NM_194285	exon3	c.A760G	p.K254E	.	.	87	5	67	0	.	90
SRBD1	55133	bcgsc.ca	37	2	45645604	45645604	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SRBD1	NM_018079	exon18	c.C2233A	p.R745R	.	.	147	7	148	1	.	90
SRGAP1	57522	ucsc.edu	37	12	64472763	64472763	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SRGAP1	NM_020762	exon9	c.A1190G	p.D397G	.	.	47	4	38	0	.	653
SRGAP3	9901	ucsc.edu	37	3	9051999	9051999	+	Missense_Mutation	SNP	G	G	T	rs140803863	byfrequency;alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SRGAP3	NM_014850	exon18	c.C2220A	p.S740R	.	.	46	4	49	0	G|1.000;A|0.000	344
SRM	6723	ucsc.edu;bcgsc.ca	37	1	11118901	11118901	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SRM	NM_003132	exon3	c.A337G	p.K113E	.	.	37	4	36	0	.	90
SRR	63826	bcgsc.ca	37	17	2221196	2221196	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SRR	NM_021947	exon3	c.G201T	p.L67F	.	.	58	5	66	0	.	90
SRRM2	23524	bcgsc.ca	37	16	2817447	2817447	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SRRM2	NM_016333	exon11	c.G6918T	p.L2306F	.	.	27	5	29	0	.	93
SSC5D	284297	hgsc.bcm.edu	37	19	56029520	56029520	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001144950	exon14	c.C3877T	p.P1293S	.	.	245	33	287	0	.	.
ST7L	54879	bcgsc.ca	37	1	113068688	113068688	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ST7L	NM_017744	exon15	c.G1675A	p.E559K	.	.	57	4	27	0	.	90
ST8SIA1	6489	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	22486954	22486954	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ST8SIA1	NM_003034	exon1	c.C213G	p.N71K	.	.	27	9	21	0	.	93
STAB1	23166	ucsc.edu	37	3	52553356	52553356	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	STAB1	NM_015136	exon49	c.T5111C	p.I1704T	.	.	45	4	27	0	.	139
STAB2	55576	bcgsc.ca	37	12	104153006	104153006	+	Silent	SNP	G	G	A	rs2271636	byfrequency;alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	STAB2	NM_017564	exon65	c.G7203A	p.L2401L	.	.	45	6	27	0	G|0.989;T|0.011	104
STAG1	10274	bcgsc.ca	37	3	136192421	136192421	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	STAG1	NM_005862	exon11	c.A1085G	p.E362G	.	.	77	4	58	0	.	228
STBD1	8987	bcgsc.ca	37	4	77231073	77231073	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	STBD1	NM_003943	exon2	c.C997A	p.R333S	.	.	59	4	38	0	.	69
STK4	6789	bcgsc.ca	37	20	43610574	43610574	+	Missense_Mutation	SNP	G	G	T	rs202040819	alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	STK4	NM_006282	exon4	c.G350T	p.R117L	.	.	96	5	131	1	G|0.999;A|0.000	767
STON1-GTF2A1L	286749	bcgsc.ca	37	2	48873955	48873955	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	STON1-GTF2A1L	NM_001198593	exon8	c.C2864A	p.P955Q	.	.	110	6	76	0	.	27
STXBP4	252983	bcgsc.ca	37	17	53120601	53120601	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	STXBP4	NM_178509	exon11	c.T860C	p.L287P	.	.	111	6	89	0	.	91
STYK1	55359	bcgsc.ca	37	12	10775267	10775267	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	STYK1,NS,carcinoma,+1	STYK1	NM_018423	exon9	c.G937A	p.G313R	.	.	95	4	142	0	.	1379
STYXL1	51657	ucsc.edu	37	7	75630209	75630209	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	STYXL1	NM_016086	exon8	c.A809G	p.Q270R	.	.	34	4	21	1	.	278
SUCNR1	56670	bcgsc.ca	37	3	151598841	151598841	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SUCNR1	NM_033050	exon3	c.C510A	p.T170T	.	.	118	5	126	0	.	711
SUCO	51430	bcgsc.ca	37	1	172546944	172546944	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_014283	exon13	c.C1325T	p.P442L	.	.	188	6	149	1	.	.
SUGT1P1	441394	bcgsc.ca	37	9	33504574	33504574	+	RNA	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	.	.	.	.	.	.	94	4	97	0	.	.
SULF1	23213	bcgsc.ca	37	8	70488386	70488386	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SULF1	NM_001128205	exon6	c.G354T	p.Q118H	.	.	73	4	85	0	.	518
SULF1	23213	bcgsc.ca	37	8	70540062	70540062	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SULF1	NM_001128205	exon17	c.A2003G	p.K668R	.	.	250	7	242	0	.	518
SULF2	55959	ucsc.edu;bcgsc.ca	37	20	46307514	46307514	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SULF2	NM_001161841	exon8	c.C1099A	p.P367T	.	.	49	5	52	0	.	293
SULT6B1	391365	bcgsc.ca	37	2	37395193	37395193	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SULT6B1	NM_001032377	exon7	c.G683T	p.W228L	.	.	147	7	133	0	.	91
SUMO4	387082	bcgsc.ca	37	6	149721742	149721742	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SUMO4	NM_001002255	exon1	c.A215G	p.K72R	.	.	60	4	55	0	.	108
SYNE1	23345	bcgsc.ca	37	6	152469322	152469322	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SYNE1	NM_182961	exon137	c.G24834A	p.V8278V	.	.	19	4	24	0	.	607
SYNE1	23345	ucsc.edu;bcgsc.ca	37	6	152683374	152683374	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SYNE1	NM_033071	exon64	c.C10251A	p.A3417A	.	.	40	4	53	0	.	607
SYNE2	23224	bcgsc.ca	37	14	64430655	64430655	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SYNE2	NM_182914	exon10	c.A927G	p.Q309Q	.	.	137	5	123	0	.	164
SYNE3	161176	broad.mit.edu	37	14	95916354	95916354	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_152592	exon7	c.T1363C	p.W455R	.	.	67	9	75	0	.	.
SYT16	83851	bcgsc.ca	37	14	62462740	62462740	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SYT16	NM_031914	exon1	c.G3T	p.M1I	.	.	99	4	91	0	.	23
SYT9	143425	broad.mit.edu	37	11	7273484	7273484	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SYT9	NM_175733	exon1	c.G67A	p.G23R	.	.	14	4	13	0	.	155
SYTL4	94121	bcgsc.ca	37	X	99941113	99941113	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	SYTL4	NM_001129896	exon14	c.C1323T	p.T441T	.	.	45	4	32	0	.	132
TAS2R3	50831	bcgsc.ca	37	7	141464079	141464079	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TAS2R3	NM_016943	exon1	c.A121G	p.M41V	.	.	74	4	68	0	.	90
TAS2R8	50836	bcgsc.ca	37	12	10958821	10958821	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TAS2R8	NM_023918	exon1	c.G759A	p.L253L	.	.	139	5	154	0	.	92
TATDN3	128387	bcgsc.ca	37	1	212988359	212988359	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TATDN3	NM_001146171	exon10	c.G707T	p.R236L	.	.	79	4	71	0	.	22
TAZ	6901	bcgsc.ca	37	X	153649252	153649252	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TAZ	NM_000116	exon11	c.G788T	p.R263L	.	.	54	4	44	0	.	130
TBC1D15	64786	bcgsc.ca	37	12	72312235	72312235	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TBC1D15	NM_022771	exon15	c.T1557C	p.S519S	.	.	115	7	107	0	.	90
TBCC	6903	bcgsc.ca	37	6	42712893	42712893	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TBCC	NM_003192	exon1	c.G919T	p.G307C	.	.	59	4	59	0	.	90
TBCK	93627	bcgsc.ca	37	4	107183330	107183330	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TBCK	NM_001163436	exon4	c.G306T	p.Q102H	.	.	58	4	70	0	.	336
TC2N	123036	bcgsc.ca	37	14	92258710	92258710	+	Splice_Site	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TC2N	NM_001128595	exon10	c.1047+1G>A	.	.	.	59	4	65	0	.	69
TCFL5	10732	bcgsc.ca	37	20	61485444	61485444	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TCFL5	NM_006602	exon5	c.A1304T	p.D435V	.	.	79	4	56	0	.	581
TDRD5	163589	bcgsc.ca	37	1	179659988	179659988	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TDRD5	NM_001199085	exon18	c.A3018G	p.T1006T	.	.	47	4	35	0	.	94
TDRD6	221400	bcgsc.ca	37	6	46658998	46658998	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TDRD6	NM_001168359	exon1	c.A3133T	p.T1045S	.	.	85	5	61	0	.	138
TDRD9	122402	bcgsc.ca	37	14	104429481	104429481	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TDRD9	NM_153046	exon3	c.C388A	p.P130T	.	.	105	6	81	0	.	70
TECTA	7007	ucsc.edu	37	11	120984350	120984350	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TECTA	NM_005422	exon5	c.A713G	p.N238S	.	.	42	4	29	0	.	225
TENC1	23371	bcgsc.ca	37	12	53451612	53451612	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TENC1	NM_015319	exon13	c.A1044G	p.G348G	.	.	81	4	56	0	.	92
TENM1	10178	bcgsc.ca	37	X	124097440	124097440	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001163278	exon1	c.A163G	p.M55V	.	.	199	7	190	0	.	.
TENM1	10178	broad.mit.edu;ucsc.edu	37	X	123695669	123695669	+	Splice_Site	SNP	T	T	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001163278	exon15	c.2288-2A>T	.	.	.	47	5	25	0	.	.
TENM2	57451	bcgsc.ca	37	5	167617445	167617445	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001122679	exon14	c.G2646T	p.Q882H	.	.	69	6	49	0	.	.
TEP1	7011	bcgsc.ca	37	14	20849102	20849102	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TEP1	NM_007110	exon33	c.C4750T	p.H1584Y	.	.	56	4	51	0	.	95
TET2	54790	bcgsc.ca	37	4	106156298	106156298	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TET2	NM_001127208	exon3	c.C1199T	p.P400L	.	.	62	4	60	0	.	4618
TEX13B	56156	ucsc.edu	37	X	107225205	107225205	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TEX13B	NM_031273	exon2	c.G153A	p.R51R	.	.	44	4	45	0	.	131
TFB2M	64216	bcgsc.ca	37	1	246711878	246711878	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TFB2M	NM_022366	exon6	c.G827A	p.R276Q	.	.	22	4	31	0	.	91
TFEB	7942	bcgsc.ca	37	6	41654861	41654861	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TFEB	NM_001167827	exon7	c.G816T	p.L272F	.	.	64	5	85	0	.	659
TG	7038	bcgsc.ca	37	8	134024262	134024262	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TG	NM_003235	exon36	c.C6379A	p.R2127R	.	.	133	6	72	0	.	145
TGFBR1	7046	bcgsc.ca	37	9	101894917	101894917	+	Missense_Mutation	SNP	G	G	T	rs147146713	alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TGFBR1	NM_004612	exon3	c.G470T	p.R157L	.	.	55	4	31	0	G|1.000;C|0.000	954
THADA	63892	bcgsc.ca	37	2	43814081	43814081	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	THADA	NM_001083953	exon5	c.T363C	p.R121R	.	.	93	5	86	0	.	228
THSD4	79875	bcgsc.ca	37	15	71704161	71704161	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	THSD4	NM_024817	exon6	c.A1151G	p.K384R	.	.	18	3	25	0	.	92
THSD7A	221981	bcgsc.ca	37	7	11485730	11485730	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	THSD7A	NM_015204	exon13	c.C3022A	p.Q1008K	.	.	101	6	109	0	.	71
THSD7B	80731	bcgsc.ca	37	2	138000048	138000048	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	THSD7B	.	.	.	.	.	.	120	6	86	0	.	75
THSD7B	80731	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	137988754	137988754	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	THSD7B	.	.	.	.	.	.	92	16	84	0	.	75
TJP1	7082	ucsc.edu	37	15	30065458	30065458	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TJP1	NM_175610	exon3	c.G187T	p.G63X	.	.	34	4	36	0	.	95
TM9SF3	56889	bcgsc.ca	37	10	98336487	98336487	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TM9SF3	NM_020123	exon2	c.G202T	p.G68W	.	.	71	4	88	0	.	90
TMBIM4	51643	bcgsc.ca	37	12	66531853	66531853	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TMBIM4	NM_016056	exon7	c.A604G	p.M202V	.	.	71	4	67	0	.	515
TMEM132C	92293	bcgsc.ca	37	12	129100744	129100744	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TMEM132C	NM_001136103	exon4	c.C1169A	p.A390D	.	.	92	4	87	1	.	68
TMEM143	55260	bcgsc.ca	37	19	48848517	48848517	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TMEM143	NM_018273	exon4	c.G464T	p.R155L	.	.	48	5	55	0	.	90
TMEM155	132332	bcgsc.ca	37	4	122681622	122681622	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TMEM155	NM_152399	exon6	c.G220T	p.D74Y	.	.	55	4	53	0	.	90
TMEM174	134288	bcgsc.ca	37	5	72469903	72469903	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TMEM174	NM_153217	exon2	c.G643T	p.D215Y	.	.	68	4	48	0	.	91
TMEM179B	374395	bcgsc.ca	37	11	62557369	62557369	+	Missense_Mutation	SNP	G	G	T	rs191664124	alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TMEM179B	NM_199337	exon5	c.G510T	p.W170C	.	.	127	5	149	0	G|0.999;A|0.001	68
TMEM2	23670	ucsc.edu;bcgsc.ca	37	9	74360144	74360144	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TMEM2	NM_001135820	exon4	c.A824G	p.D275G	.	.	38	4	48	0	.	92
TMEM232	642987	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	109941886	109941886	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001039763	exon9	c.C1005A	p.S335R	.	.	143	22	129	0	.	.
TMEM240	339453	bcgsc.ca	37	1	1470805	1470805	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001114748	exon4	c.C456A	p.A152A	.	.	52	4	78	1	.	.
TMEM255A	55026	bcgsc.ca	37	X	119445117	119445117	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001104544	exon1	c.C48A	p.P16P	.	.	58	6	49	0	.	.
TMEM33	55161	bcgsc.ca	37	4	41951331	41951331	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TMEM33	NM_018126	exon6	c.T543C	p.S181S	.	.	84	4	72	0	.	91
TMEM48	55706	bcgsc.ca	37	1	54291485	54291485	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TMEM48	NM_018087	exon5	c.T580C	p.F194L	.	.	57	4	57	0	.	92
TMF1	7110	bcgsc.ca	37	3	69074800	69074800	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TMF1	NM_007114	exon15	c.G2923T	p.D975Y	.	.	127	5	151	1	.	90
TMLHE	55217	bcgsc.ca	37	X	154774852	154774852	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TMLHE	NM_001184797	exon2	c.C86A	p.P29H	.	.	80	6	73	0	.	131
TMTC2	160335	bcgsc.ca	37	12	83290194	83290194	+	Missense_Mutation	SNP	G	G	A	rs182412509		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TMTC2	NM_152588	exon3	c.G1252A	p.V418I	.	.	91	4	82	0	G|0.999;A|0.001	92
TMX1	81542	bcgsc.ca	37	14	51721214	51721214	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TMX1	NM_030755	exon8	c.T820C	p.S274P	.	.	185	6	204	0	.	90
TNFAIP3	7128	bcgsc.ca	37	6	138199780	138199780	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TNFAIP3	NM_001270507	exon7	c.A1198G	p.T400A	.	.	60	4	48	0	.	1498
TNFRSF10A	8797	bcgsc.ca	37	8	23069702	23069702	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TNFRSF10A	NM_003844	exon2	c.C330A	p.T110T	.	.	115	5	110	0	.	1086
TNKS1BP1	85456	bcgsc.ca	37	11	57068419	57068419	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TNKS1BP1	NM_033396	exon10	c.T5068C	p.C1690R	.	.	24	3	36	0	.	91
TNRC18	84629	bcgsc.ca	37	7	5396863	5396863	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TNRC18	NM_001080495	exon16	c.G4878A	p.L1626L	.	.	65	4	79	0	.	46
TNRC6A	27327	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	24802369	24802369	+	Silent	SNP	G	G	A	rs113829020	byfrequency;alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TNRC6A	NM_014494	exon6	c.G2406A	p.G802G	.	.	24	12	27	0	G|0.997;C|0.003	92
TNRC6B	23112	bcgsc.ca	37	22	40521863	40521863	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TNRC6B	NM_001024843	exon3	c.C42A	p.S14S	.	.	86	6	93	0	.	22
TNRC6C	57690	bcgsc.ca	37	17	76069163	76069163	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TNRC6C	NM_018996	exon8	c.G2905T	p.D969Y	.	.	113	6	84	0	.	24
TPM2	7169	ucsc.edu;bcgsc.ca	37	9	35685294	35685294	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TPM2	NM_213674	exon5	c.T535C	p.S179P	.	.	32	4	27	0	.	515
TPP2	7174	bcgsc.ca	37	13	103288584	103288584	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TPP2	NM_003291	exon13	c.C1520T	p.A507V	.	.	67	4	56	0	.	92
TPR	7175	bcgsc.ca	37	1	186314812	186314812	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TPR	NM_003292	exon24	c.A3113G	p.K1038R	.	.	53	4	38	0	.	228
TRABD	80305	bcgsc.ca	37	22	50633336	50633336	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TRABD	NM_025204	exon5	c.G287T	p.R96L	.	.	67	4	57	0	.	90
TRAFD1	10906	bcgsc.ca	37	12	112587574	112587574	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TRAFD1	NM_001143906	exon9	c.C1178A	p.P393Q	.	.	63	4	65	0	.	90
TRAIP	10293	broad.mit.edu;bcgsc.ca	37	3	49869470	49869470	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TRAIP	NM_005879	exon11	c.C916T	p.R306C	.	.	40	9	33	0	.	849
TRAM1	23471	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	71499196	71499196	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TRAM1	NM_014294	exon8	c.A680G	p.Y227C	.	.	114	22	102	0	.	227
TRAPPC11	60684	bcgsc.ca	37	4	184618990	184618990	+	Splice_Site	SNP	T	T	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_199053	exon25	c.2851+2T>A	.	.	.	33	5	33	0	.	.
TRIM27	5987	ucsc.edu	37	6	28871993	28871993	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TRIM27	NM_006510	exon8	c.T1396C	p.F466L	.	.	46	4	24	0	.	684
TRPC3	7222	bcgsc.ca	37	4	122846205	122846205	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TRPC3	NM_001130698	exon3	c.G1144A	p.V382I	.	.	95	4	116	0	.	92
TRPC7	57113	bcgsc.ca	37	5	135587501	135587501	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_020389	exon6	c.A1415G	p.N472S	.	.	79	4	56	0	.	.
TRPM6	140803	bcgsc.ca	37	9	77367265	77367265	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TRPM6	NM_017662	exon29	c.T4926C	p.H1642H	.	.	60	4	57	1	.	335
TRPM7	54822	bcgsc.ca	37	15	50955226	50955226	+	Silent	SNP	T	T	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TRPM7	NM_017672	exon2	c.A21T	p.I7I	.	.	77	4	88	0	.	392
TSC2	7249	ucsc.edu;bcgsc.ca	37	16	2112539	2112539	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TSC2	NM_001114382	exon13	c.C1299T	p.S433S	.	.	42	4	40	0	.	1908
TSPAN15	23555	bcgsc.ca	37	10	71211395	71211395	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TSPAN15	NM_012339	exon1	c.C45T	p.F15F	.	.	22	4	23	0	.	90
TSPYL5	85453	bcgsc.ca	37	8	98288976	98288976	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TSPYL5	NM_033512	exon1	c.T1097C	p.V366A	.	.	88	4	85	0	.	136
TTC21B	79809	bcgsc.ca	37	2	166767917	166767917	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TTC21B	NM_024753	exon18	c.A2381G	p.D794G	.	.	185	6	148	0	.	94
TTC21B	79809	bcgsc.ca	37	2	166781176	166781176	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TTC21B	NM_024753	exon12	c.G1399A	p.G467R	.	.	125	5	91	0	.	94
TTC26	79989	bcgsc.ca	37	7	138819414	138819414	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TTC26	NM_001144920	exon2	c.C17T	p.A6V	.	.	45	4	32	0	.	91
TTC3	7267	bcgsc.ca	37	21	38496982	38496982	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TTC3	NM_001001894	exon14	c.G1173T	p.K391N	.	.	78	4	69	0	.	590
TTC37	9652	bcgsc.ca	37	5	94857839	94857839	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TTC37	NM_014639	exon19	c.A1930G	p.I644V	.	.	209	6	180	0	.	94
TTC5	91875	bcgsc.ca	37	14	20764564	20764564	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TTC5	NM_138376	exon6	c.T681C	p.H227H	.	.	51	4	68	0	.	91
TTC8	123016	bcgsc.ca	37	14	89327659	89327659	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TTC8	NM_144596	exon10	c.A892G	p.I298V	.	.	123	5	132	0	.	90
TTLL10	254173	ucsc.edu	37	1	1120456	1120456	+	Silent	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TTLL10	NM_001130045	exon13	c.C1368T	p.G456G	.	.	34	4	33	0	.	153
TTLL2	83887	bcgsc.ca	37	6	167753925	167753925	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TTLL2	NM_031949	exon3	c.C537A	p.P179P	.	.	76	4	61	0	.	92
TTN	7273	bcgsc.ca	37	2	179427133	179427133	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TTN	NM_001267550	exon326	c.A83726G	p.K27909R	.	.	53	4	40	0	.	636
TTN	7273	bcgsc.ca	37	2	179434680	179434680	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TTN	NM_001267550	exon326	c.T76179C	p.P25393P	.	.	86	5	58	0	.	636
TTN	7273	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	179407524	179407524	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TTN	NM_001267550	exon348	c.G97057A	p.V32353I	.	.	122	20	104	0	.	636
TUBA4B	80086	ucsc.edu	37	2	220136591	220136591	+	RNA	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	.	.	.	.	.	.	29	4	24	1	.	.
TUBGCP5	114791	bcgsc.ca	37	15	22867496	22867496	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TUBGCP5	NM_052903	exon19	c.G2572A	p.G858S	.	.	65	4	87	0	.	91
TXNL1	9352	bcgsc.ca	37	18	54285303	54285303	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	TXNL1	NM_004786	exon4	c.G424T	p.D142Y	.	.	69	4	66	0	.	90
U2AF1L4	199746	bcgsc.ca	37	19	36235228	36235228	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	U2AF1L4	NM_144987	exon3	c.T227A	p.V76D	.	.	48	4	39	0	.	90
UACA	55075	bcgsc.ca	37	15	70983678	70983678	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	UACA	NM_018003	exon4	c.C326G	p.A109G	.	.	93	4	87	0	.	94
UBASH3B	84959	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	122659905	122659905	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	UBASH3B	NM_032873	exon6	c.G869A	p.S290N	.	.	48	9	32	0	.	68
UBE4B	10277	bcgsc.ca	37	1	10218504	10218504	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	UBE4B	NM_001105562	exon22	c.A3017G	p.N1006S	.	.	47	4	69	0	.	229
UCN2	90226	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	3	48600437	48600437	+	Nonsense_Mutation	SNP	G	G	A	rs149022309		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	UCN2	NM_033199	exon2	c.C121T	p.R41X	.	.	71	17	74	0	G|1.000;A|0.000	68
UGGT1	56886	bcgsc.ca	37	2	128939772	128939772	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	UGGT1	NM_020120	exon37	c.T4152C	p.P1384P	.	.	104	5	91	0	.	91
UGGT2	55757	bcgsc.ca	37	13	96555202	96555202	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	UGGT2	NM_020121	exon21	c.A2408G	p.N803S	.	.	96	6	101	0	.	92
UGT3A1	133688	bcgsc.ca	37	5	35965858	35965858	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	UGT3A1	NM_152404	exon4	c.T473C	p.L158P	.	.	89	5	87	0	.	92
ULK1	8408	ucsc.edu	37	12	132398998	132398998	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ULK1	NM_003565	exon16	c.C1349A	p.S450X	.	.	29	4	21	0	.	758
UNC13B	10497	ucsc.edu	37	9	35400298	35400298	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	UNC13B	NM_006377	exon36	c.C4095A	p.Y1365X	.	.	44	4	74	1	.	157
UNC80	285175	bcgsc.ca	37	2	210837984	210837984	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	UNC80	NM_032504	exon55	c.A8379G	p.A2793A	.	.	53	4	33	0	.	90
UQCRH	7388	bcgsc.ca	37	1	46775869	46775869	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	UQCRH	NM_006004	exon3	c.A124G	p.K42E	.	.	96	5	64	0	.	90
URB1	9875	bcgsc.ca	37	21	33757876	33757876	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_014825	exon2	c.G260T	p.G87V	.	.	56	4	45	0	.	.
USH2A	7399	bcgsc.ca	37	1	216040459	216040459	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	USH2A	NM_206933	exon44	c.C8735A	p.P2912Q	.	.	51	4	41	1	.	115
USO1	8615	bcgsc.ca	37	4	76703890	76703890	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	USO1	.	.	.	.	.	.	59	4	49	0	.	25
USP12	219333	ucsc.edu;bcgsc.ca	37	13	27643523	27643523	+	Splice_Site	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	USP12	NM_182488	exon10	c.1012-2A>G	.	.	.	46	4	57	0	.	522
USP16	10600	bcgsc.ca	37	21	30409756	30409756	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	USP16	NM_006447	exon6	c.A608G	p.N203S	.	.	156	7	147	0	.	659
USP24	23358	bcgsc.ca	37	1	55627918	55627918	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	USP24	NM_015306	exon8	c.A947G	p.Q316R	.	.	158	5	95	0	.	521
USP28	57646	bcgsc.ca	37	11	113675656	113675656	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	USP28	NM_020886	exon20	c.C2513A	p.P838H	.	.	82	7	100	1	.	706
USP36	57602	bcgsc.ca	37	17	76803115	76803115	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	USP36	NM_025090	exon14	c.A2011G	p.S671G	.	.	209	8	162	1	.	659
USP46	64854	ucsc.edu;bcgsc.ca	37	4	53494294	53494294	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	USP46	NM_022832	exon3	c.G154A	p.A52T	.	.	43	4	56	0	.	637
USP6	9098	bcgsc.ca	37	17	5045383	5045383	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	USP6	NM_004505	exon16	c.A1659G	p.T553T	.	.	170	6	179	0	.	662
UTRN	7402	hgsc.bcm.edu;broad.mit.edu;mdanderson.org	37	6	144783916	144783916	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	UTRN	NM_007124	exon22	c.C2980T	p.Q994X	.	.	86	22	81	0	.	95
VAV1	7409	bcgsc.ca	37	19	6850758	6850758	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	VAV1	NM_005428	exon24	c.G2207T	p.R736L	.	.	63	6	44	0	.	1276
VCAN	1462	bcgsc.ca	37	5	82815867	82815867	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	VCAN	NM_004385	exon7	c.C1742T	p.T581M	.	.	90	4	93	0	.	238
VPS13A	23230	bcgsc.ca	37	9	79931297	79931297	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	VPS13A	NM_001018038	exon39	c.T4838C	p.V1613A	.	.	69	4	76	1	.	161
VPS33A	65082	bcgsc.ca	37	12	122723186	122723186	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	VPS33A	NM_022916	exon10	c.A1250G	p.N417S	.	.	58	4	56	0	.	91
VWA3A	146177	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	22144300	22144300	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	VWA3A	NM_173615	exon20	c.A1952G	p.E651G	.	.	27	6	24	1	.	1
WASF2	10163	bcgsc.ca	37	1	27734689	27734689	+	Silent	SNP	G	G	A	rs141539142		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	WASF2	NM_006990	exon9	c.C1491T	p.S497S	.	.	59	4	57	0	G|1.000;A|0.000	228
WDFY3	23001	bcgsc.ca	37	4	85642715	85642715	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	WDFY3	NM_014991	exon47	c.G7452T	p.K2484N	.	.	11	3	19	0	.	93
WDFY4	57705	bcgsc.ca	37	10	50075379	50075379	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	WDFY4	NM_020945	exon40	c.C6733A	p.H2245N	.	.	118	5	128	1	.	22
WDFY4	57705	broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	49983837	49983837	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	WDFY4	NM_020945	exon15	c.A2849G	p.N950S	.	.	64	7	40	0	.	22
WDR11	55717	bcgsc.ca	37	10	122650328	122650328	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	WDR11	NM_018117	exon19	c.A2444G	p.D815G	.	.	144	6	126	1	.	226
WDR12	55759	bcgsc.ca	37	2	203748421	203748421	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	WDR12	NM_018256	exon11	c.G1032T	p.W344C	.	.	119	6	103	0	.	90
WDR41	55255	bcgsc.ca	37	5	76736721	76736721	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	WDR41	NM_018268	exon9	c.C799A	p.P267T	.	.	74	4	98	0	.	90
WDR47	22911	bcgsc.ca	37	1	109553666	109553666	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	WDR47	NM_001142550	exon5	c.T1023C	p.L341L	.	.	223	6	160	0	.	91
WDR52	55779	bcgsc.ca	37	3	113120547	113120547	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	WDR52	NM_001164496	exon10	c.G1210T	p.D404Y	.	.	133	5	148	1	.	90
WDR59	79726	bcgsc.ca	37	16	74921628	74921628	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	WDR59	NM_030581	exon23	c.G2372T	p.C791F	.	.	56	4	40	0	.	92
WDR6	11180	ucsc.edu	37	3	49050085	49050085	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	WDR6	NM_018031	exon2	c.T1208C	p.L403P	.	.	49	4	48	0	.	90
WDR72	256764	bcgsc.ca	37	15	53998162	53998162	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	WDR72	NM_182758	exon10	c.C1064A	p.P355H	.	.	51	4	44	0	.	92
WDR7	23335	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	18	54362254	54362254	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	WDR7	NM_052834	exon11	c.A1182G	p.I394M	.	.	130	29	130	0	.	93
WDR81	124997	ucsc.edu	37	17	1640928	1640928	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	WDR81	NM_001163809	exon10	c.A5775G	p.K1925K	.	.	31	4	16	0	.	91
WNK2	65268	ucsc.edu	37	9	95992138	95992138	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	WNK2	NM_006648	exon2	c.G842T	p.G281V	.	.	24	4	19	0	.	765
WTAP	9589	bcgsc.ca	37	6	160174584	160174584	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	WTAP	NM_001270531	exon7	c.A545G	p.Q182R	.	.	82	4	75	0	.	90
WWTR1	25937	bcgsc.ca	37	3	149238646	149238646	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	WWTR1	NM_001168278	exon8	c.C1149A	p.F383L	.	.	110	5	88	1	.	94
XKR5	389610	bcgsc.ca	37	8	6669814	6669814	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	XKR5	NM_207411	exon8	c.C966A	p.S322S	.	.	68	5	72	0	.	90
XKRX	402415	bcgsc.ca	37	X	100169413	100169413	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	XKRX	NM_212559	exon3	c.T1264C	p.C422R	.	.	66	4	77	0	.	130
XPNPEP3	63929	bcgsc.ca	37	22	41318467	41318467	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	XPNPEP3	NM_022098	exon8	c.C1186A	p.L396I	.	.	45	4	36	0	.	68
XPO1	7514	bcgsc.ca	37	2	61710169	61710169	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	XPO1	NM_003400	exon22	c.A2735G	p.Q912R	.	.	142	5	101	0	.	229
XPO1	7514	bcgsc.ca	37	2	61719608	61719608	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	XPO1	NM_003400	exon15	c.A1575G	p.L525L	.	.	81	4	59	0	.	229
XPO5	57510	bcgsc.ca	37	6	43514350	43514350	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	XPO5	NM_020750	exon20	c.A2300G	p.E767G	.	.	48	4	63	1	.	271
XRCC4	7518	bcgsc.ca	37	5	82491614	82491614	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	XRCC4	NM_003401	exon4	c.A341G	p.E114G	.	.	69	4	67	0	.	229
YIF1A	10897	bcgsc.ca	37	11	66055334	66055334	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	YIF1A	NM_020470	exon3	c.A297G	p.T99T	.	.	62	4	49	0	.	90
YWHAG	7532	bcgsc.ca	37	7	75959133	75959133	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	YWHAG	NM_012479	exon2	c.C505T	p.H169Y	.	.	57	4	69	0	.	523
ZAN	7455	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	100349904	100349904	+	RNA	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZAN	.	.	.	.	.	.	288	43	338	1	.	142
ZBBX	79740	bcgsc.ca	37	3	167051669	167051669	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZBBX	NM_024687	exon10	c.C633A	p.T211T	.	.	150	5	171	0	.	92
ZBED5	58486	bcgsc.ca	37	11	10875185	10875185	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_021211	exon3	c.T1308C	p.S436S	.	.	65	4	49	0	.	.
ZBTB24	9841	bcgsc.ca	37	6	109788864	109788864	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZBTB24	NM_014797	exon6	c.A1362G	p.R454R	.	.	63	5	49	0	.	92
ZBTB41	360023	bcgsc.ca	37	1	197147590	197147590	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZBTB41	NM_194314	exon6	c.T1729G	p.C577G	.	.	84	5	73	0	.	92
ZC3H12B	340554	bcgsc.ca	37	X	64708709	64708709	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZC3H12B	NM_001010888	exon1	c.C28T	p.P10S	.	.	81	5	74	0	.	131
ZC3H12B	340554	bcgsc.ca	37	X	64709219	64709219	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZC3H12B	NM_001010888	exon1	c.C538A	p.L180I	.	.	105	5	84	0	.	131
ZCCHC14	23174	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	87446754	87446754	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZCCHC14	NM_015144	exon11	c.G1240A	p.G414S	.	.	30	7	23	0	.	154
ZFC3H1	196441	bcgsc.ca	37	12	72050982	72050982	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZFC3H1	NM_144982	exon2	c.A698G	p.K233R	.	.	125	5	101	1	.	138
ZFHX3	463	bcgsc.ca	37	16	72845855	72845855	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZFHX3	NM_006885	exon6	c.T3612C	p.S1204S	.	.	101	5	121	0	.	72
ZFHX4	79776	bcgsc.ca	37	8	77766143	77766143	+	Missense_Mutation	SNP	C	C	T	rs199766653		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZFHX4	NM_024721	exon10	c.C6986T	p.T2329M	.	.	61	4	41	0	.	98
ZFP14	57677	bcgsc.ca	37	19	36831200	36831200	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZFP14	NM_020917	exon5	c.T1528C	p.C510R	.	.	89	6	91	0	.	91
ZFP36L1	677	bcgsc.ca	37	14	69256302	69256302	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZFP36L1	NM_001244701	exon3	c.A1172G	p.D391G	.	.	43	4	45	1	.	91
ZFX	7543	bcgsc.ca	37	X	24228518	24228518	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZFX	NM_003410	exon10	c.C1443A	p.T481T	.	.	86	4	101	2	.	132
ZFYVE20	64145	bcgsc.ca	37	3	15127447	15127447	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZFYVE20	NM_022340	exon6	c.C311A	p.S104Y	.	.	58	4	64	0	.	92
ZFYVE26	23503	bcgsc.ca	37	14	68260355	68260355	+	Silent	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZFYVE26	NM_015346	exon14	c.C2523T	p.I841I	.	.	21	3	30	0	.	162
ZHX1	11244	bcgsc.ca	37	8	124268077	124268077	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZHX1	NM_007222	exon3	c.C110A	p.P37H	.	.	91	5	69	0	.	91
ZHX3	23051	bcgsc.ca	37	20	39833256	39833256	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZHX3	NM_015035	exon3	c.A301G	p.T101A	.	.	62	4	43	0	.	93
ZIC5	85416	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	100617641	100617641	+	Missense_Mutation	SNP	G	G	A	rs146570814		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZIC5	NM_033132	exon2	c.C1982T	p.T661M	.	.	63	13	60	0	G|1.000;A|0.000	90
ZKSCAN2	342357	bcgsc.ca	37	16	25258412	25258412	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZKSCAN2	NM_001012981	exon5	c.C1105A	p.R369R	.	.	202	8	158	1	.	138
ZKSCAN3	80317	bcgsc.ca	37	6	28333935	28333935	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZKSCAN3	NM_024493	exon6	c.A1490G	p.E497G	.	.	68	5	59	0	.	92
ZKSCAN4	387032	bcgsc.ca	37	6	28213172	28213172	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZKSCAN4	NM_019110	exon5	c.C1360A	p.H454N	.	.	66	4	88	0	.	91
ZMIZ2	83637	ucsc.edu	37	7	44801331	44801331	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZMIZ2	NM_031449	exon11	c.G1423T	p.E475X	.	.	26	4	32	0	.	137
ZMYM2	7750	bcgsc.ca	37	13	20657019	20657019	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZMYM2	NM_001190964	exon24	c.A3667T	p.N1223Y	.	.	130	5	135	0	.	685
ZMYM4	9202	bcgsc.ca	37	1	35847276	35847276	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZMYM4	NM_005095	exon9	c.G1486T	p.G496W	.	.	75	4	99	0	.	291
ZNF165	7718	bcgsc.ca	37	6	28056701	28056701	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF165	NM_003447	exon4	c.A911G	p.N304S	.	.	129	6	124	0	.	90
ZNF175	7728	bcgsc.ca	37	19	52090606	52090606	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF175	NM_007147	exon5	c.G1022T	p.G341V	.	.	64	4	74	0	.	90
ZNF221	7638	ucsc.edu	37	19	44471329	44471329	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF221	NM_013359	exon6	c.G1675T	p.E559X	.	.	45	4	56	0	.	91
ZNF233	353355	ucsc.edu;bcgsc.ca	37	19	44777921	44777921	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF233	NM_001207005	exon5	c.T1108C	p.C370R	.	.	44	4	48	0	.	92
ZNF24	7572	bcgsc.ca	37	18	32917377	32917377	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF24	NM_006965	exon4	c.G926A	p.C309Y	.	.	84	4	88	0	.	90
ZNF251	90987	bcgsc.ca	37	8	145947918	145947918	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF251	NM_138367	exon5	c.C1127T	p.P376L	.	.	51	4	39	0	.	68
ZNF267	10308	bcgsc.ca	37	16	31895862	31895862	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF267	NM_003414	exon2	c.A47G	p.E16G	.	.	32	3	67	1	.	138
ZNF267	10308	bcgsc.ca	37	16	31927691	31927691	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF267	NM_003414	exon4	c.G2121T	p.R707R	.	.	42	4	39	0	.	138
ZNF273	10793	bcgsc.ca	37	7	64388165	64388165	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF273	NM_021148	exon4	c.G459T	p.A153A	.	.	95	6	162	0	.	90
ZNF283	284349	bcgsc.ca	37	19	44351393	44351393	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF283	NM_181845	exon7	c.A640G	p.K214E	.	.	68	4	75	0	.	68
ZNF283	284349	bcgsc.ca	37	19	44352211	44352211	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF283	NM_181845	exon7	c.C1458A	p.S486S	.	.	77	4	76	0	.	68
ZNF334	55713	bcgsc.ca	37	20	45130272	45130272	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF334	NM_018102	exon5	c.A1706G	p.Q569R	.	.	70	4	68	0	.	92
ZNF33B	7582	bcgsc.ca	37	10	43088832	43088832	+	Missense_Mutation	SNP	C	C	A	rs150118989	byfrequency;alternate_allele	TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF33B	NM_006955	exon5	c.G1566T	p.L522F	.	.	59	4	64	0	C|0.998;T|0.002	90
ZNF341	84905	ucsc.edu	37	20	32378921	32378921	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF341	NM_032819	exon15	c.C2142A	p.S714S	.	.	47	4	36	0	.	92
ZNF365	22891	bcgsc.ca	37	10	64136118	64136118	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF365	NM_014951	exon2	c.A166G	p.R56G	.	.	84	5	89	0	.	92
ZNF365	22891	bcgsc.ca	37	10	64429984	64429984	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF365	NM_199451	exon8	c.G1312T	p.D438Y	.	.	99	5	84	0	.	92
ZNF419	79744	bcgsc.ca	37	19	58004605	58004605	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF419	NM_001098491	exon5	c.G683T	p.G228V	.	.	77	4	81	0	.	90
ZNF473	25888	ucsc.edu;bcgsc.ca	37	19	50550100	50550100	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF473	NM_015428	exon5	c.T2400C	p.N800N	.	.	34	4	33	0	.	91
ZNF484	83744	bcgsc.ca	37	9	95609865	95609865	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF484	NM_001261458	exon4	c.C1210T	p.H404Y	.	.	156	6	151	0	.	90
ZNF532	55205	ucsc.edu;bcgsc.ca	37	18	56646394	56646394	+	Silent	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF532	NM_018181	exon9	c.C3258A	p.A1086A	.	.	47	4	60	0	.	154
ZNF536	9745	ucsc.edu	37	19	30936309	30936309	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF536	NM_014717	exon2	c.C1840A	p.Q614K	.	.	29	4	21	0	.	144
ZNF550	162972	bcgsc.ca	37	19	58059007	58059007	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF550	.	.	.	.	.	.	79	4	78	2	.	90
ZNF561	93134	bcgsc.ca	37	19	9721813	9721813	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF561	NM_152289	exon6	c.G524A	p.G175E	.	.	110	4	125	1	.	91
ZNF578	147660	ucsc.edu;bcgsc.ca	37	19	53015353	53015353	+	Silent	SNP	T	T	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_001099694	exon6	c.T1719A	p.G573G	.	.	40	4	39	0	.	.
ZNF585B	92285	broad.mit.edu	37	19	37677574	37677574	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF585B	NM_152279	exon5	c.C865A	p.R289R	.	.	130	6	121	0	.	91
ZNF586	54807	bcgsc.ca	37	19	58291071	58291071	+	Silent	SNP	A	A	T	rs201991987		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF586	NM_017652	exon3	c.A1116T	p.P372P	.	.	54	4	73	0	A|1.000;T|0.000	92
ZNF594	84622	bcgsc.ca	37	17	5085559	5085559	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF594	NM_032530	exon2	c.T1993C	p.S665P	.	.	74	6	92	0	.	71
ZNF594	84622	bcgsc.ca	37	17	5087489	5087489	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF594	NM_032530	exon2	c.C63A	p.S21S	.	.	97	5	148	0	.	71
ZNF615	284370	bcgsc.ca	37	19	52498071	52498071	+	Silent	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF615	NM_001199324	exon7	c.T291C	p.D97D	.	.	53	4	52	0	.	95
ZNF667	63934	bcgsc.ca	37	19	56953151	56953151	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF667	NM_022103	exon5	c.C1213A	p.Q405K	.	.	134	5	132	0	.	91
ZNF678	339500	bcgsc.ca	37	1	227843488	227843488	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF678	NM_178549	exon4	c.G1702A	p.G568R	.	.	140	5	70	0	.	91
ZNF680	340252	bcgsc.ca	37	7	63982596	63982596	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF680	NM_178558	exon4	c.A536G	p.K179R	.	.	113	5	105	1	.	91
ZNF680	340252	bcgsc.ca	37	7	63982691	63982691	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF680	NM_178558	exon4	c.A441G	p.R147R	.	.	94	4	138	1	.	91
ZNF684	127396	bcgsc.ca	37	1	41007346	41007346	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF684	NM_152373	exon4	c.A202G	p.M68V	.	.	107	6	139	0	.	90
ZNF711	7552	bcgsc.ca	37	X	84526421	84526421	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF711	NM_021998	exon9	c.G1873T	p.D625Y	.	.	96	4	102	0	.	134
ZNF75D	7626	broad.mit.edu;ucsc.edu;bcgsc.ca	37	X	134426310	134426310	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF75D	NM_007131	exon3	c.A501C	p.Q167H	.	.	74	10	87	1	.	130
ZNF791	163049	bcgsc.ca	37	19	12739894	12739894	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF791	NM_153358	exon4	c.G1551A	p.M517I	.	.	56	4	66	0	.	92
ZNF792	126375	bcgsc.ca	37	19	35449202	35449202	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	NM_175872	exon4	c.C1557A	p.S519S	.	.	47	4	53	1	.	.
ZNF799	90576	bcgsc.ca	37	19	12501581	12501581	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF799	NM_001080821	exon4	c.T1631C	p.L544P	.	.	93	6	93	0	.	74
ZNF799	90576	bcgsc.ca	37	19	12501734	12501734	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF799	NM_001080821	exon4	c.A1478G	p.Q493R	.	.	119	5	107	0	.	74
ZNF83	55769	bcgsc.ca	37	19	53116795	53116795	+	Silent	SNP	T	T	C	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF83	NM_018300	exon3	c.A1023G	p.G341G	.	.	52	4	66	0	.	91
ZNF835	90485	bcgsc.ca	37	19	57176342	57176342	+	Silent	SNP	G	G	T	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZNF835	NM_001005850	exon2	c.C225A	p.P75P	.	.	47	4	39	0	.	72
ZP2	7783	bcgsc.ca	37	16	21221499	21221499	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZP2	NM_003460	exon3	c.G166T	p.D56Y	.	.	67	4	66	0	.	91
ZP4	57829	ucsc.edu	37	1	238053355	238053355	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZP4	NM_021186	exon2	c.G297T	p.W99C	.	.	47	4	21	0	.	93
ZZEF1	23140	ucsc.edu	37	17	3978673	3978673	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WGS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	ZZEF1	NM_015113	exon22	c.G3285T	p.W1095C	.	.	37	4	37	0	.	93
COL12A1	1303	bcgsc.ca	37	6	75838127	75838128	+	Missense_Mutation	DNP	GC	GC	TT	novel		TCGA-G3-A25W-01A-11D-A16V-10	TCGA-G3-A25W-11A-12D-A16V-10	GC	GC	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	36e1d9cc-32ec-4a0a-8fb1-c46f058a6fb8	fdc8e770-343e-4c4e-bc1d-99375ea94de4	.	.	.	.	.	p.G2075E	.	.	.	.	.	.	.	
