Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	TranscriptID	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov_SOL	TVarCov_SOL	NTotCov_SOL	NVarCov_SOL	dbSNPPopFreq	COSMIC_Gene_Freq
ABCA13	154664	bcgsc.ca	37	7	48317894	48317894	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ABCA13	NM_152701	exon18	c.C7103A	p.A2368D	.	.	70	29	86	0	.	521
ABCA6	23460	bcgsc.ca	37	17	67085652	67085652	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ABCA6	NM_080284	exon27	c.A3560G	p.E1187G	.	.	73	4	66	0	.	159
ABCC4	10257	bcgsc.ca	37	13	95858953	95858953	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ABCC4	NM_005845	exon8	c.G994A	p.V332M	.	.	76	26	95	0	.	515
ACADM	34	bcgsc.ca	37	1	76198378	76198378	+	Silent	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ACADM	NM_001127328	exon3	c.C180T	p.A60A	.	.	122	35	154	0	.	155
ACSS1	84532	bcgsc.ca	37	20	25004120	25004120	+	Silent	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ACSS1	NM_001252677	exon4	c.G789A	p.L263L	.	.	66	4	80	0	.	92
ADAD1	132612	bcgsc.ca	37	4	123332460	123332460	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ADAD1	NM_139243	exon9	c.C932T	p.S311F	.	.	287	35	344	0	.	90
ADAMTS12	81792	bcgsc.ca	37	5	33684042	33684042	+	Silent	SNP	C	C	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ADAMTS12	NM_030955	exon4	c.G753T	p.L251L	.	.	127	70	84	0	.	232
ADD1	118	bcgsc.ca	37	4	2906529	2906529	+	Silent	SNP	G	G	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ADD1	NM_014190	exon10	c.G1200T	p.L400L	.	.	188	40	174	0	.	92
AFAP1L1	134265	bcgsc.ca	37	5	148699221	148699221	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	AFAP1L1	NM_001146337	exon13	c.C1556T	p.A519V	.	.	111	25	88	0	.	136
AGXT	189	bcgsc.ca	37	2	241814588	241814588	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	AGXT	NM_000030	exon7	c.C743T	p.A248V	.	.	177	50	206	1	.	90
AKAP13	11214	bcgsc.ca	37	15	86123972	86123972	+	Silent	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	AKAP13	NM_007200	exon7	c.C2673T	p.D891D	.	.	73	10	92	0	.	258
AKAP9	10142	bcgsc.ca	37	7	91682122	91682122	+	Silent	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	AKAP9	NM_005751	exon22	c.A5451G	p.E1817E	.	.	102	4	83	0	.	755
AKR1C2	1646	bcgsc.ca	37	10	5046010	5046010	+	Missense_Mutation	SNP	C	C	A	rs200242177	alternate_allele	TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	AKR1C2	NM_001354	exon3	c.G18T	p.Q6H	.	.	217	73	258	1	C|0.999;T|0.001	514
ALKBH3	221120	bcgsc.ca	37	11	43940662	43940662	+	Silent	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ALKBH3	NM_139178	exon9	c.A744G	p.E248E	.	.	67	4	66	0	.	90
ANKRD26	22852	bcgsc.ca	37	10	27294602	27294602	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ANKRD26	NM_014915	exon34	c.G5050A	p.D1684N	.	.	91	4	114	0	.	138
ANKRD30B	374860	bcgsc.ca	37	18	14791433	14791433	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ANKRD30B	NM_001145029	exon16	c.T1768C	p.Y590H	.	.	246	93	314	0	.	24
AP2A2	161	bcgsc.ca	37	11	1000575	1000575	+	Silent	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	AP2A2	NM_001242837	exon15	c.T2103C	p.P701P	.	.	20	4	20	0	.	90
APAF1	317	bcgsc.ca	37	12	99056329	99056329	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	APAF1	NM_181868	exon6	c.T806C	p.V269A	.	.	80	4	110	0	.	229
ARAP2	116984	bcgsc.ca	37	4	36085011	36085011	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ARAP2	NM_015230	exon29	c.A4487G	p.K1496R	.	.	95	4	111	0	.	93
ARHGAP1	392	bcgsc.ca	37	11	46703710	46703710	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ARHGAP1	NM_004308	exon5	c.C340G	p.Q114E	.	.	190	37	163	0	.	227
ARHGAP5	394	bcgsc.ca	37	14	32560165	32560165	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ARHGAP5	NM_001173	exon2	c.A290T	p.E97V	.	.	68	16	89	0	.	94
ARID1A	8289	bcgsc.ca	37	1	27102114	27102114	+	Silent	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ARID1A	NM_006015	exon19	c.C5040T	p.L1680L	.	.	128	9	142	0	.	584
ARID1A	8289	bcgsc.ca	37	1	27102116	27102139	+	In_Frame_Del	DEL	TGGCAGAGAGCACATGGGCATTAG	TGGCAGAGAGCACATGGGCATTAG	-	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	TGGCAGAGAGCACATGGGCATTAG	TGGCAGAGAGCACATGGGCATTAG	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ARID1A	NM_006015	exon19	c.5042_5065del	p.1681_1689del	.	.	127	9	146	0	.	584
ASGR1	432	bcgsc.ca	37	17	7077757	7077757	+	Silent	SNP	G	G	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ASGR1	NM_001671	exon6	c.C378T	p.H126H	.	.	267	90	194	0	.	153
ASXL2	55252	bcgsc.ca	37	2	25967273	25967273	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ASXL2	NM_018263	exon12	c.T1933C	p.S645P	.	.	84	4	87	0	.	23
ATG2B	55102	bcgsc.ca	37	14	96795057	96795057	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ATG2B	NM_018036	exon13	c.T1928C	p.V643A	.	.	125	5	135	1	.	93
ATL3	25923	bcgsc.ca	37	11	63398635	63398635	+	Silent	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ATL3	NM_015459	exon12	c.G1416A	p.L472L	.	.	177	44	139	0	.	69
ATP5J2-PTCD1	100526740	bcgsc.ca	37	7	99021532	99021532	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	.	NM_001198879	exon8	c.G1933T	p.A645S	.	.	304	132	216	0	.	.
ATP8B1	5205	bcgsc.ca	37	18	55351288	55351288	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ATP8B1	NM_005603	exon15	c.T1610C	p.V537A	.	.	93	6	62	0	.	587
ATP8B2	57198	bcgsc.ca	37	1	154319146	154319146	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ATP8B2	NM_020452	exon26	c.G3174T	p.W1058C	.	.	518	157	347	0	.	92
ATRNL1	26033	bcgsc.ca	37	10	117061550	117061550	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ATRNL1	NM_207303	exon17	c.T2815C	p.S939P	.	.	67	4	75	0	.	96
ATXN2	6311	bcgsc.ca	37	12	111926327	111926327	+	Silent	SNP	T	T	C	rs138912353	alternate_allele	TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ATXN2	NM_002973	exon15	c.A2673G	p.A891A	.	.	181	54	198	0	T|1.000;G|0.000	136
B3GALTL	145173	bcgsc.ca	37	13	31822032	31822032	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	B3GALTL	NM_194318	exon6	c.T388C	p.F130L	.	.	85	4	90	0	.	92
BCLAF1	9774	bcgsc.ca	37	6	136599813	136599813	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	BCLAF1	NM_014739	exon4	c.G206T	p.R69L	.	.	106	25	149	0	.	228
BICD1	636	bcgsc.ca	37	12	32458899	32458899	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	BICD1	NM_001714	exon4	c.A848G	p.D283G	.	.	70	4	77	0	.	153
BIRC6	57448	bcgsc.ca	37	2	32660588	32660588	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	BIRC6	NM_016252	exon14	c.A3434G	p.N1145S	.	.	72	4	83	0	.	233
BRIP1	83990	bcgsc.ca	37	17	59871069	59871069	+	Silent	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	BRIP1	NM_032043	exon10	c.A1362G	p.E454E	.	.	64	5	68	0	.	660
BTC	685	bcgsc.ca	37	4	75673278	75673278	+	Silent	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	BTC	NM_001729	exon5	c.A510G	p.E170E	.	.	94	4	93	0	.	523
C11orf82	220042	bcgsc.ca	37	11	82644461	82644461	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	C11orf82	NM_145018	exon6	c.C2081T	p.T694I	.	.	72	34	80	0	.	70
C14orf37	145407	bcgsc.ca	37	14	58605485	58605485	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	C14orf37	NM_001001872	exon2	c.G592A	p.E198K	.	.	94	4	116	0	.	90
C2orf78	388960	bcgsc.ca	37	2	74043271	74043271	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	C2orf78	NM_001080474	exon3	c.G1921T	p.G641W	.	.	53	4	64	0	.	24
C5	727	bcgsc.ca	37	9	123805338	123805338	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	C5	NM_001735	exon3	c.A365G	p.D122G	.	.	104	4	111	0	.	92
C8orf4	56892	bcgsc.ca	37	8	40011190	40011190	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	C8orf4	NM_020130	exon1	c.T139C	p.S47P	.	.	55	4	44	1	.	69
CALM3	808	bcgsc.ca	37	19	47111479	47111479	+	Silent	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	CALM3	NM_005184	exon3	c.T60C	p.F20F	.	.	63	4	87	0	.	91
CASD1	64921	bcgsc.ca	37	7	94167114	94167114	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	CASD1	NM_022900	exon9	c.A1174G	p.K392E	.	.	76	4	68	0	.	70
CCDC108	255101	bcgsc.ca	37	2	219885907	219885907	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	CCDC108	NM_194302	exon19	c.T3226C	p.W1076R	.	.	123	5	135	0	.	94
CCDC170	80129	bcgsc.ca	37	6	151917535	151917535	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	.	NM_025059	exon9	c.A1533G	p.I511M	.	.	51	4	80	0	.	.
CCDC67	159989	bcgsc.ca	37	11	93088638	93088638	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	CCDC67	NM_181645	exon3	c.A131G	p.E44G	.	.	149	6	106	0	.	91
CCDC88A	55704	bcgsc.ca	37	2	55571530	55571530	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	CCDC88A	NM_018084	exon11	c.A1162G	p.K388E	.	.	102	4	113	0	.	94
CDAN1	146059	bcgsc.ca	37	15	43027504	43027504	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	CDAN1	NM_138477	exon5	c.G1012A	p.V338M	.	.	60	4	53	0	.	92
CDC37L1	55664	bcgsc.ca	37	9	4688579	4688579	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	CDC37L1	NM_017913	exon3	c.A481C	p.K161Q	.	.	160	53	176	0	.	90
CDH18	1016	bcgsc.ca	37	5	19503117	19503117	+	Silent	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	CDH18	NM_001167667	exon11	c.T1614C	p.T538T	.	.	73	4	63	0	.	159
CERS6	253782	bcgsc.ca	37	2	169551475	169551475	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	.	NM_001256126	exon6	c.A523G	p.T175A	.	.	164	5	201	0	.	.
CLPTM1	1209	bcgsc.ca	37	19	45488528	45488528	+	Silent	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	CLPTM1	NM_001294	exon6	c.A639G	p.T213T	.	.	75	34	80	0	.	91
CNOT6	57472	bcgsc.ca	37	5	179956371	179956371	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	CNOT6	NM_015455	exon2	c.C95G	p.A32G	.	.	179	39	202	0	.	90
COBL	23242	bcgsc.ca	37	7	51097117	51097117	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	COBL	NM_015198	exon10	c.A1676G	p.N559S	.	.	142	30	102	0	.	95
COL22A1	169044	bcgsc.ca	37	8	139890424	139890424	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	COL22A1	NM_152888	exon3	c.G227T	p.R76L	.	.	73	22	44	0	.	103
COL24A1	255631	bcgsc.ca	37	1	86340381	86340381	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	COL24A1	NM_152890	exon35	c.A3089G	p.D1030G	.	.	102	6	115	0	.	94
COL28A1	340267	bcgsc.ca	37	7	7413028	7413028	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	COL28A1	NM_001037763	exon32	c.A2509C	p.I837L	.	.	261	53	195	1	.	93
COL4A1	1282	bcgsc.ca	37	13	110850975	110850975	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	COL4A1	NM_001845	exon21	c.T1124C	p.L375P	.	.	72	4	55	0	.	654
COMMD3-BMI1	0	bcgsc.ca	37	10	22618054	22618054	+	Silent	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	.	NM_001204062	exon13	c.A1077G	p.R359R	.	.	53	4	53	0	.	.
CSMD1	64478	bcgsc.ca	37	8	3200972	3200972	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	CSMD1	NM_033225	exon23	c.G3475T	p.V1159L	.	.	72	35	94	1	.	86
CWH43	80157	bcgsc.ca	37	4	48990546	48990546	+	Silent	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	CWH43	NM_025087	exon2	c.T96C	p.F32F	.	.	91	4	66	0	.	93
CXCL5	6374	bcgsc.ca	37	4	74864222	74864222	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	CXCL5	NM_002994	exon1	c.T77C	p.L26P	.	.	144	30	94	0	.	650
DCUN1D3	123879	bcgsc.ca	37	16	20871607	20871607	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	DCUN1D3	NM_173475	exon3	c.A516T	p.E172D	.	.	79	4	71	0	.	92
DIAPH3	81624	bcgsc.ca	37	13	60557952	60557952	+	Silent	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	DIAPH3	NM_001042517	exon13	c.A1431G	p.P477P	.	.	65	4	86	0	.	516
DISP1	84976	bcgsc.ca	37	1	223179204	223179204	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	DISP1	NM_032890	exon10	c.G4465C	p.V1489L	.	.	290	43	215	0	.	68
DLGAP1	9229	bcgsc.ca	37	18	3742408	3742408	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	DLGAP1	NM_001242761	exon6	c.C1277A	p.A426E	.	.	125	42	148	0	.	229
DNAH11	8701	bcgsc.ca	37	7	21621575	21621575	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	DNAH11	.	.	.	.	.	.	93	4	91	0	.	146
DNAH2	146754	bcgsc.ca	37	17	7671482	7671482	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	DNAH2	NM_020877	exon23	c.G3838T	p.D1280Y	.	.	68	5	64	0	.	102
DNAJC1	64215	bcgsc.ca	37	10	22209794	22209794	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	DNAJC1	NM_022365	exon4	c.T470C	p.L157P	.	.	78	4	83	0	.	226
DNAJC22	79962	bcgsc.ca	37	12	49743308	49743308	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	DNAJC22	NM_024902	exon2	c.T653A	p.F218Y	.	.	121	8	129	0	.	159
DNM2	1785	bcgsc.ca	37	19	10906847	10906847	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	DNM2	NM_004945	exon10	c.T1307G	p.I436S	.	.	138	42	162	0	.	471
DPP7	29952	bcgsc.ca	37	9	140008791	140008791	+	Silent	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	DPP7	NM_013379	exon3	c.T225C	p.T75T	.	.	34	4	33	0	.	90
DPP8	54878	bcgsc.ca	37	15	65772582	65772582	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	DPP8	NM_197960	exon11	c.A1322G	p.E441G	.	.	57	4	84	0	.	91
DSPP	1834	bcgsc.ca	37	4	88537270	88537270	+	Silent	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	DSPP	NM_014208	exon5	c.C3456T	p.D1152D	.	.	209	9	166	8	.	90
DTD2	112487	bcgsc.ca	37	14	31926584	31926584	+	Missense_Mutation	SNP	G	G	A	rs3087952		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	.	NM_080664	exon1	c.C16T	p.R6W	.	.	214	11	132	0	.	.
EHD2	30846	bcgsc.ca	37	19	48219967	48219967	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	EHD2	NM_014601	exon2	c.T98A	p.L33Q	.	.	135	37	178	0	.	92
EIF3A	8661	bcgsc.ca	37	10	120832562	120832562	+	Silent	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	EIF3A	NM_003750	exon4	c.T381C	p.V127V	.	.	42	4	47	0	.	226
EIF3B	8662	bcgsc.ca	37	7	2403395	2403395	+	Silent	SNP	G	G	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	EIF3B	NM_001037283	exon5	c.G999A	p.A333A	.	.	52	21	30	1	.	68
ELMSAN1	91748	bcgsc.ca	37	14	74196575	74196575	+	Silent	SNP	A	A	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	.	NM_194278	exon4	c.T1863G	p.P621P	.	.	118	56	98	0	.	.
EMP2	2013	bcgsc.ca	37	16	10626827	10626827	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	EMP2	NM_001424	exon5	c.T439C	p.W147R	.	.	69	4	60	0	.	90
EMR1	2015	bcgsc.ca	37	19	6921786	6921786	+	Silent	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	EMR1	NM_001256253	exon14	c.A1683G	p.R561R	.	.	96	4	111	0	.	526
EPS8L1	54869	bcgsc.ca	37	19	55592800	55592800	+	Silent	SNP	C	C	A	rs146217963	alternate_allele	TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	EPS8L1	NM_133180	exon8	c.C714A	p.A238A	.	.	95	38	88	0	C|1.000;G|0.000	115
ERF	2077	bcgsc.ca	37	19	42753873	42753873	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ERF	NM_006494	exon4	c.A391G	p.S131G	.	.	75	26	61	3	.	658
EVC2	132884	bcgsc.ca	37	4	5633649	5633649	+	Silent	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	EVC2	NM_147127	exon11	c.A1581G	p.R527R	.	.	139	5	132	0	.	155
FAF1	11124	bcgsc.ca	37	1	51210403	51210403	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	FAF1	NM_007051	exon5	c.T412C	p.S138P	.	.	66	4	58	0	.	652
FAM111B	374393	bcgsc.ca	37	11	58893058	58893058	+	Silent	SNP	G	G	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	FAM111B	NM_198947	exon4	c.G1488A	p.V496V	.	.	224	54	240	0	.	92
FAM179B	23116	bcgsc.ca	37	14	45501490	45501490	+	Silent	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	FAM179B	NM_015091	exon11	c.A3723G	p.P1241P	.	.	129	5	129	0	.	93
FAM5C	339479	bcgsc.ca	37	1	190067205	190067205	+	Silent	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	FAM5C	NM_199051	exon8	c.G2244A	p.A748A	.	.	192	24	131	0	.	228
FAM65C	140876	bcgsc.ca	37	20	49221180	49221180	+	Splice_Site	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	FAM65C	NM_080829	exon13	c.1074+2T>C	.	.	.	58	4	66	0	.	92
FCRL5	83416	bcgsc.ca	37	1	157514336	157514336	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	FCRL5	NM_031281	exon5	c.A560G	p.E187G	.	.	110	57	61	0	.	156
FGB	2244	bcgsc.ca	37	4	155490755	155490755	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	FGB	NM_005141	exon7	c.G1048A	p.D350N	.	.	94	5	91	0	.	93
FGF5	2250	bcgsc.ca	37	4	81196086	81196086	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	FGF5	NM_004464	exon2	c.T379C	p.S127P	.	.	227	6	198	0	.	1135
FMO3	2328	bcgsc.ca	37	1	171072961	171072961	+	Silent	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	FMO3	NM_006894	exon3	c.A168G	p.K56K	.	.	288	153	169	0	.	187
FRG1B	284802	bcgsc.ca	37	20	29623231	29623231	+	RNA	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	FRG1B	.	.	.	.	.	.	412	24	451	6	.	22
GC	2638	bcgsc.ca	37	4	72623849	72623849	+	Silent	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	GC	NM_001204307	exon8	c.T798C	p.D266D	.	.	109	4	117	0	.	93
GIN1	54826	bcgsc.ca	37	5	102444410	102444410	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	GIN1	NM_017676	exon2	c.T2C	p.M1T	.	.	61	4	58	0	.	92
GNAQ	2776	bcgsc.ca	37	9	80537112	80537112	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	GNAQ	NM_002072	exon2	c.A286T	p.T96S	.	.	156	8	139	1	.	3808
GOLGB1	2804	bcgsc.ca	37	3	121411031	121411031	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	GOLGB1	NM_001256486	exon14	c.T7180C	p.S2394P	.	.	80	4	107	0	.	161
GOLIM4	27333	bcgsc.ca	37	3	167728183	167728183	+	Silent	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	GOLIM4	NM_014498	exon16	c.A1965G	p.G655G	.	.	71	4	77	0	.	291
GON4L	54856	bcgsc.ca	37	1	155734765	155734765	+	Missense_Mutation	SNP	A	A	G	rs199671178	alternate_allele	TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	GON4L	NM_032292	exon21	c.T4499C	p.V1500A	.	.	377	63	259	0	A|1.000;T|0.000	93
GPHN	10243	bcgsc.ca	37	14	67243210	67243210	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	GPHN	NM_001024218	exon3	c.A172G	p.I58V	.	.	85	4	108	0	.	228
GRHL2	79977	bcgsc.ca	37	8	102589654	102589654	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	GRHL2	NM_024915	exon7	c.T910C	p.F304L	.	.	77	4	47	0	.	93
GUK1	2987	bcgsc.ca	37	1	228336428	228336428	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	GUK1	NM_001242840	exon7	c.C601A	p.P201T	.	.	80	26	45	0	.	115
HDAC6	10013	bcgsc.ca	37	X	48661291	48661291	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	HDAC6	NM_006044	exon3	c.A107G	p.K36R	.	.	85	57	57	0	.	230
HECTD4	283450	bcgsc.ca	37	12	112613662	112613662	+	Silent	SNP	G	G	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	.	NM_001109662	exon66	c.C11070T	p.V3690V	.	.	141	34	176	0	.	.
HELT	391723	bcgsc.ca	37	4	185940547	185940547	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	HELT	NM_001029887	exon2	c.C166A	p.P56T	.	.	248	10	242	1	.	226
HELZ	9931	bcgsc.ca	37	17	65185736	65185736	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	HELZ	NM_014877	exon11	c.A833T	p.H278L	.	.	146	34	195	0	.	92
HOOK3	84376	bcgsc.ca	37	8	42812266	42812266	+	Silent	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	HOOK3	NM_032410	exon7	c.T498C	p.A166A	.	.	84	4	83	0	.	154
HSPA13	6782	bcgsc.ca	37	21	15748106	15748106	+	Silent	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	HSPA13	NM_006948	exon4	c.A615G	p.T205T	.	.	91	4	104	0	.	226
IFT122	55764	bcgsc.ca	37	3	129214369	129214369	+	Silent	SNP	C	C	T	rs73204231		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	IFT122	NM_052985	exon19	c.C2280T	p.A760A	.	.	132	10	166	3	.	92
IGFL1	374918	bcgsc.ca	37	19	46733725	46733725	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	.	NM_198541	exon3	c.A274G	p.N92D	.	.	65	4	82	0	.	.
ING3	54556	bcgsc.ca	37	7	120607679	120607679	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ING3	NM_019071	exon7	c.A533G	p.D178G	.	.	73	4	87	0	.	515
IPO13	9670	bcgsc.ca	37	1	44433274	44433274	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	IPO13	NM_014652	exon20	c.A2812G	p.R938G	.	.	143	6	151	1	.	226
IPO5	3843	bcgsc.ca	37	13	98645235	98645235	+	Silent	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	IPO5	NM_002271	exon10	c.T813C	p.P271P	.	.	80	4	97	0	.	228
ITPR2	3709	bcgsc.ca	37	12	26647249	26647249	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ITPR2	NM_002223	exon39	c.A5207T	p.D1736V	.	.	64	19	54	0	.	542
ITSN2	50618	bcgsc.ca	37	2	24469692	24469692	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ITSN2	NM_147152	exon28	c.A3359G	p.E1120G	.	.	48	4	60	0	.	539
IVNS1ABP	10625	bcgsc.ca	37	1	185267396	185267396	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	IVNS1ABP	NM_006469	exon15	c.T1700A	p.F567Y	.	.	170	97	153	0	.	94
IVNS1ABP	10625	bcgsc.ca	37	1	185267406	185267406	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	IVNS1ABP	NM_006469	exon15	c.T1690G	p.C564G	.	.	141	81	140	0	.	94
KATNAL2	83473	bcgsc.ca	37	18	44626699	44626699	+	Silent	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	KATNAL2	NM_031303	exon14	c.C1233T	p.I411I	.	.	36	7	47	0	.	93
KCNQ4	9132	bcgsc.ca	37	1	41283964	41283964	+	Splice_Site	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	KCNQ4	NM_172163	exon3	c.532+2T>C	.	.	.	86	33	113	1	.	90
KDM6B	23135	bcgsc.ca	37	17	7749782	7749782	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	KDM6B	NM_001080424	exon7	c.A521G	p.E174G	.	.	78	4	80	1	.	205
KIAA1432	57589	bcgsc.ca	37	9	5772583	5772583	+	Silent	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	KIAA1432	NM_020829	exon24	c.T3636C	p.G1212G	.	.	92	4	103	0	.	90
KIF6	221458	bcgsc.ca	37	6	39513359	39513359	+	Silent	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	KIF6	NM_145027	exon11	c.G1287A	p.K429K	.	.	54	21	81	0	.	713
KIFC2	90990	bcgsc.ca	37	8	145697525	145697526	+	Frame_Shift_Del	DEL	CT	CT	-	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	CT	CT	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	KIFC2	NM_145754	exon14	c.1490_1491del	p.497_497del	.	.	121	31	98	0	.	92
KRT26	353288	bcgsc.ca	37	17	38926059	38926059	+	Silent	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	KRT26	NM_181539	exon5	c.T916C	p.L306L	.	.	416	32	478	0	.	90
KTN1	3895	bcgsc.ca	37	14	56138558	56138558	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	KTN1	NM_001079521	exon37	c.A3494G	p.K1165R	.	.	99	4	132	0	.	1147
LAMB2	3913	bcgsc.ca	37	3	49167709	49167711	+	In_Frame_Del	DEL	AGA	AGA	-	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	AGA	AGA	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	LAMB2	NM_002292	exon9	c.1178_1180del	p.393_394del	.	.	147	33	151	0	.	93
LECT1	11061	bcgsc.ca	37	13	53282732	53282732	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	LECT1	NM_007015	exon6	c.A728G	p.N243S	.	.	210	7	242	0	.	92
LEPREL4	10609	bcgsc.ca	37	17	39959225	39959225	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	LEPREL4	NM_006455	exon8	c.A1298G	p.E433G	.	.	51	4	50	0	.	90
LMO3	55885	bcgsc.ca	37	12	16753632	16753632	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	LMO3	NM_001243612	exon2	c.T217C	p.Y73H	.	.	95	5	104	0	.	90
LMTK3	114783	bcgsc.ca	37	19	48994795	48994795	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	LMTK3	NM_001080434	exon14	c.A4181G	p.E1394G	.	.	57	5	52	1	.	1357
LMTK3	114783	bcgsc.ca	37	19	49000747	49000747	+	Silent	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	LMTK3	NM_001080434	exon12	c.A3666G	p.G1222G	.	.	42	4	27	0	.	1357
LRP2	4036	bcgsc.ca	37	2	170013995	170013995	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	LRP2	NM_004525	exon64	c.A11905G	p.T3969A	.	.	66	4	124	0	.	175
LRRC8A	56262	bcgsc.ca	37	9	131670047	131670047	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	LRRC8A	NM_001127244	exon3	c.A604G	p.S202G	.	.	84	27	64	0	.	90
MAPK4	5596	bcgsc.ca	37	18	48190780	48190780	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	MAPK4	NM_002747	exon2	c.A452G	p.K151R	.	.	79	4	93	0	.	1404
MAPT	4137	bcgsc.ca	37	17	44049306	44049306	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	MAPT	NM_005910	exon3	c.C215T	p.A72V	.	.	52	16	48	0	.	91
MDC1	9656	bcgsc.ca	37	6	30673262	30673262	+	Missense_Mutation	SNP	T	T	C	rs143642977	byfrequency	TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	MDC1	NM_014641	exon10	c.A3698G	p.N1233S	.	.	217	11	267	3	T|0.998;C|0.002	273
MDM1	56890	bcgsc.ca	37	12	68720503	68720503	+	Silent	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	MDM1	NM_020128	exon3	c.A432G	p.T144T	.	.	134	5	158	0	.	95
MDM2	4193	bcgsc.ca	37	12	69207366	69207366	+	Silent	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	MDM2	NM_002392	exon3	c.A132G	p.L44L	.	.	65	4	106	0	.	1270
MEGF6	1953	bcgsc.ca	37	1	3414980	3414980	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	MEGF6	NM_001409	exon26	c.C3307T	p.R1103C	.	.	46	6	27	0	.	90
MIS18BP1	55320	bcgsc.ca	37	14	45693687	45693687	+	Silent	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	MIS18BP1	NM_018353	exon11	c.T2103C	p.N701N	.	.	69	4	116	0	.	90
MLH3	27030	bcgsc.ca	37	14	75513956	75513957	+	Frame_Shift_Del	DEL	AG	AG	-	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	AG	AG	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	MLH3	NM_014381	exon2	c.2402_2403del	p.801_801del	.	.	126	20	175	0	.	228
MLL4	8085	bcgsc.ca	37	19	36210419	36210419	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	MLL4	NM_014727	exon2	c.C412T	p.R138C	.	.	51	4	68	0	.	697
MMP3	4314	bcgsc.ca	37	11	102713260	102713260	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	MMP3	NM_002422	exon3	c.T401A	p.V134D	.	.	178	39	154	0	.	226
MTERFD3	80298	bcgsc.ca	37	12	107371779	107371779	+	Silent	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	MTERFD3	NM_001033050	exon3	c.T714C	p.G238G	.	.	71	5	71	0	.	68
MUC2	4583	bcgsc.ca	37	11	1093393	1093393	+	Missense_Mutation	SNP	G	G	A	rs199525790		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	MUC2	NM_002457	exon30	c.G5212A	p.G1738S	.	.	97	8	84	3	.	90
MYO5A	4644	bcgsc.ca	37	15	52605952	52605952	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	MYO5A	NM_000259	exon41	c.G5509A	p.A1837T	.	.	70	4	74	0	.	93
MYO9A	4649	bcgsc.ca	37	15	72122595	72122595	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	MYO9A	NM_006901	exon40	c.C6895T	p.R2299W	.	.	86	19	108	0	.	93
MYT1L	23040	bcgsc.ca	37	2	1895915	1895915	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	MYT1L	NM_015025	exon15	c.T2171G	p.M724R	.	.	107	7	78	1	.	95
NBN	4683	bcgsc.ca	37	8	90960118	90960118	+	Silent	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	NBN	NM_002485	exon12	c.A1848G	p.Q616Q	.	.	83	4	85	0	.	1395
NBPF7	343505	bcgsc.ca	37	1	120387039	120387039	+	Silent	SNP	G	G	T	rs72469596	alternate_allele	TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	NBPF7	NM_001047980	exon1	c.C120A	p.I40I	.	.	66	5	71	1	.	24
NCAPD3	23310	bcgsc.ca	37	11	134072793	134072793	+	Silent	SNP	G	G	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	NCAPD3	NM_015261	exon13	c.C1533T	p.S511S	.	.	80	8	109	0	.	229
NCOR1	9611	bcgsc.ca	37	17	15935796	15935796	+	Silent	SNP	G	G	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	NCOR1	NM_006311	exon46	c.C7137G	p.G2379G	.	.	49	25	77	0	.	229
NCOR1	9611	bcgsc.ca	37	17	15971227	15971227	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	NCOR1	NM_001190440	exon31	c.4770delT	p.F1590fs	.	.	44	18	108	0	.	229
NEK1	4750	bcgsc.ca	37	4	170502055	170502055	+	Splice_Site	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	NEK1	NM_001199397	exon12	c.808-2A>G	.	.	.	90	4	88	0	.	361
NKAP	79576	bcgsc.ca	37	X	119059318	119059318	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	NKAP	NM_024528	exon9	c.C1113A	p.N371K	.	.	103	81	60	0	.	132
NLRP11	204801	bcgsc.ca	37	19	56320985	56320985	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	NLRP11	NM_145007	exon5	c.A991G	p.I331V	.	.	52	4	48	0	.	169
NMUR2	56923	bcgsc.ca	37	5	151784407	151784407	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	NMUR2	NM_020167	exon1	c.T268A	p.S90T	.	.	109	56	100	0	.	526
NPHS2	7827	bcgsc.ca	37	1	179523629	179523629	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	NPHS2	NM_014625	exon6	c.A776T	p.K259I	.	.	415	13	344	0	.	90
NRBP1	29959	bcgsc.ca	37	2	27656275	27656275	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	NRBP1	NM_013392	exon2	c.A135T	p.E45D	.	.	115	40	141	0	.	334
OR11H2	79334	bcgsc.ca	37	14	20181616	20181616	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	.	NM_001197287	exon2	c.C460A	p.H154N	.	.	414	158	372	0	.	.
OR2C1	4993	bcgsc.ca	37	16	3406149	3406149	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	OR2C1	NM_012368	exon1	c.A209G	p.D70G	.	.	209	7	208	1	.	69
OR2T33	391195	bcgsc.ca	37	1	248436937	248436937	+	Silent	SNP	G	G	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	OR2T33	NM_001004695	exon1	c.C180A	p.L60L	.	.	1030	456	641	0	.	114
OR5H1	26341	bcgsc.ca	37	3	97852336	97852336	+	Silent	SNP	G	G	A	rs138973744		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	OR5H1	NM_001005338	exon1	c.G795A	p.P265P	.	.	208	53	238	0	G|1.000;A|0.000	136
OR8D2	283160	bcgsc.ca	37	11	124189739	124189739	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	OR8D2	NM_001002918	exon1	c.G355A	p.E119K	.	.	45	22	55	0	.	113
PACSIN2	11252	bcgsc.ca	37	22	43308052	43308052	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	PACSIN2	NM_007229	exon2	c.A35G	p.E12G	.	.	63	4	54	0	.	68
PARP14	54625	bcgsc.ca	37	3	122411320	122411320	+	Silent	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	PARP14	NM_017554	exon4	c.T528C	p.S176S	.	.	151	6	142	0	.	525
PARP4	143	bcgsc.ca	37	13	25044076	25044076	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	PARP4	NM_006437	exon16	c.T2002C	p.C668R	.	.	91	4	75	0	.	94
PCDHB10	56126	bcgsc.ca	37	5	140572961	140572961	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	PCDHB10	NM_018930	exon1	c.A836G	p.Y279C	.	.	80	6	82	0	.	92
PCLO	27445	bcgsc.ca	37	7	82583240	82583240	+	Silent	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	PCLO	NM_014510	exon5	c.A7029G	p.P2343P	.	.	193	55	176	1	.	29
PET112	5188	bcgsc.ca	37	4	152593987	152593987	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	PET112	NM_004564	exon12	c.A1472T	p.Q491L	.	.	215	40	168	0	.	90
PHKB	5257	bcgsc.ca	37	16	47695696	47695696	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	PHKB	NM_000293	exon23	c.T2263C	p.F755L	.	.	82	4	95	0	.	154
PHLDB2	90102	bcgsc.ca	37	3	111671430	111671430	+	Silent	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	PHLDB2	NM_001134439	exon11	c.T2643C	p.S881S	.	.	50	4	47	0	.	96
PIK3C2A	5286	bcgsc.ca	37	11	17156440	17156440	+	Silent	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	PIK3C2A	NM_002645	exon10	c.A2034G	p.E678E	.	.	140	5	108	0	.	1310
PIK3R2	5296	bcgsc.ca	37	19	18279290	18279290	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	PIK3R2	NM_005027	exon14	c.T1742C	p.L581P	.	.	54	5	53	0	.	1311
PIPSL	266971	bcgsc.ca	37	10	95718575	95718575	+	RNA	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	.	.	.	.	.	.	.	225	7	274	0	.	.
PIWIL1	9271	bcgsc.ca	37	12	130834496	130834496	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	PIWIL1	NM_004764	exon9	c.T1028C	p.L343S	.	.	45	4	63	0	.	92
PJA2	9867	bcgsc.ca	37	5	108704384	108704384	+	Silent	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	PJA2	NM_014819	exon5	c.A1347G	p.K449K	.	.	199	7	137	0	.	92
PLCZ1	89869	bcgsc.ca	37	12	18876412	18876412	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	PLCZ1	NM_033123	exon4	c.T200C	p.I67T	.	.	69	4	92	0	.	228
PLEKHG3	26030	bcgsc.ca	37	14	65208191	65208191	+	Silent	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	PLEKHG3	NM_015549	exon14	c.C1788T	p.A596A	.	.	61	31	58	0	.	91
PLEKHG4B	153478	bcgsc.ca	37	5	155484	155484	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	PLEKHG4B	NM_052909	exon7	c.T1066A	p.C356S	.	.	168	68	170	0	.	228
PLEKHN1	84069	bcgsc.ca	37	1	909846	909855	+	Frame_Shift_Del	DEL	GGGACCCCGG	GGGACCCCGG	-	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	GGGACCCCGG	GGGACCCCGG	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	PLEKHN1	NM_032129	exon16	c.1727_1736del	p.576_579del	.	.	64	0	77	0	.	227
PLG	5340	bcgsc.ca	37	6	161158038	161158038	+	Silent	SNP	A	A	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	PLG	NM_000301	exon14	c.A1801C	p.R601R	.	.	60	45	89	0	.	94
PLIN4	729359	bcgsc.ca	37	19	4510594	4510594	+	Silent	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	PLIN4	NM_001080400	exon3	c.G3336A	p.G1112G	.	.	89	27	104	0	.	68
PLXNC1	10154	bcgsc.ca	37	12	94697585	94697585	+	Silent	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	PLXNC1	NM_005761	exon29	c.A4440G	p.E1480E	.	.	81	4	87	0	.	92
PPIG	9360	bcgsc.ca	37	2	170487422	170487422	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	PPIG	NM_004792	exon10	c.A686G	p.K229R	.	.	95	4	133	0	.	92
PPP6R2	9701	bcgsc.ca	37	22	50854528	50854528	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	PPP6R2	NM_001242898	exon6	c.A560G	p.N187S	.	.	100	27	103	0	.	92
PRDM15	63977	bcgsc.ca	37	21	43221645	43221645	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	PRDM15	NM_022115	exon31	c.G4279A	p.V1427I	.	.	181	115	190	2	.	90
PROSER1	80209	bcgsc.ca	37	13	39596503	39596503	+	Silent	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	.	NM_025138	exon9	c.T690C	p.A230A	.	.	99	5	132	2	.	.
PRSS16	10279	bcgsc.ca	37	6	27220676	27220676	+	Silent	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	PRSS16	NM_005865	exon9	c.T1098C	p.S366S	.	.	215	83	201	0	.	94
PTBP1	5725	bcgsc.ca	37	19	810762	810762	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	PTBP1	NM_002819	exon15	c.T1610C	p.L537P	.	.	39	4	56	0	.	227
PTGES2	80142	bcgsc.ca	37	9	130887595	130887595	+	Silent	SNP	C	C	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	PTGES2	NM_025072	exon2	c.G405C	p.V135V	.	.	122	54	96	0	.	90
PTGES2	80142	bcgsc.ca	37	9	130887600	130887600	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	PTGES2	NM_025072	exon2	c.C400T	p.P134S	.	.	123	55	95	0	.	90
PTGR2	145482	bcgsc.ca	37	14	74325597	74325597	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	PTGR2	NM_152444	exon2	c.G32A	p.R11Q	.	.	117	5	118	0	.	90
PXDNL	137902	bcgsc.ca	37	8	52321315	52321315	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	PXDNL	NM_144651	exon17	c.G2869T	p.G957W	.	.	166	32	118	0	.	70
RAB5B	5869	bcgsc.ca	37	12	56383869	56383869	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	RAB5B	NM_002868	exon3	c.A302G	p.D101G	.	.	143	5	147	1	.	227
RALGAPB	57148	bcgsc.ca	37	20	37202799	37202799	+	Silent	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	RALGAPB	NM_020336	exon29	c.A4149G	p.T1383T	.	.	81	4	126	0	.	92
RASSF7	8045	bcgsc.ca	37	11	562540	562540	+	Silent	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	RASSF7	NM_001143994	exon3	c.C586T	p.L196L	.	.	47	4	41	0	.	91
RBM5	10181	bcgsc.ca	37	3	50131178	50131178	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	RBM5	NM_005778	exon4	c.A209G	p.D70G	.	.	68	4	63	0	.	278
RCBTB2	1102	bcgsc.ca	37	13	49070340	49070340	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	RCBTB2	NM_001268	exon14	c.A1502G	p.K501R	.	.	69	4	76	0	.	418
RCHY1	25898	bcgsc.ca	37	4	76415820	76415820	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	RCHY1	NM_015436	exon8	c.C628T	p.P210S	.	.	155	70	185	0	.	228
REV3L	5980	bcgsc.ca	37	6	111711382	111711382	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	REV3L	NM_002912	exon6	c.T664C	p.S222P	.	.	104	6	134	0	.	294
RGS22	26166	bcgsc.ca	37	8	101016167	101016167	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	RGS22	NM_015668	exon17	c.A2614G	p.T872A	.	.	79	6	65	0	.	140
RIC8B	55188	bcgsc.ca	37	12	107237670	107237670	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	RIC8B	NM_018157	exon6	c.T1106C	p.L369S	.	.	57	4	49	0	.	91
RIOK1	83732	bcgsc.ca	37	6	7405545	7405545	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	RIOK1	NM_031480	exon12	c.A1160G	p.D387G	.	.	93	4	92	0	.	336
RPL15	6138	bcgsc.ca	37	3	23959939	23959939	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	RPL15	NM_001253383	exon3	c.A181G	p.I61V	.	.	75	18	74	1	.	91
SBSPON	157869	bcgsc.ca	37	8	73982180	73982180	+	Silent	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	.	NM_153225	exon4	c.T537C	p.P179P	.	.	116	5	100	1	.	.
SCN1A	6323	bcgsc.ca	37	2	166911151	166911151	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	SCN1A	NM_001165964	exon4	c.T599C	p.F200S	.	.	76	4	83	0	.	147
SCPEP1	59342	bcgsc.ca	37	17	55058493	55058493	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	SCPEP1	NM_021626	exon2	c.G127A	p.V43M	.	.	168	49	218	0	.	91
SFRP5	6425	bcgsc.ca	37	10	99527327	99527327	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	SFRP5	NM_003015	exon3	c.T898C	p.S300P	.	.	98	5	109	1	.	658
SLC24A4	123041	bcgsc.ca	37	14	92958081	92958081	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	SLC24A4	NM_153646	exon15	c.C1610T	p.P537L	.	.	136	5	172	2	.	93
SLC27A4	10999	bcgsc.ca	37	9	131105476	131105476	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	SLC27A4	NM_005094	exon2	c.G65C	p.W22S	.	.	337	163	256	1	.	90
SLC4A8	9498	bcgsc.ca	37	12	51863450	51863450	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	SLC4A8	NM_001039960	exon12	c.A1402C	p.S468R	.	.	305	29	327	1	.	95
SLC4A9	83697	bcgsc.ca	37	5	139739997	139739997	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	SLC4A9	NM_001258428	exon1	c.A176G	p.Q59R	.	.	76	4	70	0	.	67
SLITRK4	139065	bcgsc.ca	37	X	142716432	142716432	+	Silent	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	SLITRK4	NM_001184750	exon2	c.A2493G	p.Q831Q	.	.	75	4	67	0	.	193
SMARCAD1	56916	bcgsc.ca	37	4	95197544	95197544	+	Silent	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	SMARCAD1	NM_001128429	exon15	c.A1863G	p.K621K	.	.	73	5	87	0	.	229
SMC4	10051	bcgsc.ca	37	3	160148405	160148405	+	Silent	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	SMC4	NM_005496	exon18	c.A2814G	p.Q938Q	.	.	78	28	109	0	.	291
SPAST	6683	bcgsc.ca	37	2	32379552	32379552	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	SPAST	NM_014946	exon17	c.A1838G	p.D613G	.	.	85	4	59	0	.	153
SPTSSA	171546	bcgsc.ca	37	14	34931375	34931375	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	.	NM_138288	exon1	c.G39A	p.M13I	.	.	149	25	120	0	.	.
SRSF12	135295	bcgsc.ca	37	6	89814978	89814978	+	Silent	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	SRSF12	NM_080743	exon4	c.A276G	p.T92T	.	.	105	4	108	0	.	90
SSFA2	6744	bcgsc.ca	37	2	182780346	182780346	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	SSFA2	NM_001130445	exon11	c.A1979G	p.H660R	.	.	106	6	108	0	.	153
STARD6	147323	bcgsc.ca	37	18	51880863	51880863	+	Silent	SNP	A	A	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	STARD6	NM_139171	exon1	c.T81G	p.V27V	.	.	170	55	192	0	.	91
SULT1C2	6819	bcgsc.ca	37	2	108921692	108921692	+	Silent	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	SULT1C2	NM_176825	exon7	c.T600C	p.I200I	.	.	83	4	84	1	.	91
SYNRG	11276	bcgsc.ca	37	17	35898515	35898515	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	SYNRG	NM_007247	exon18	c.A3428G	p.K1143R	.	.	61	4	98	0	.	92
SZT2	23334	bcgsc.ca	37	1	43869391	43869391	+	Silent	SNP	T	T	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	SZT2	NM_015284	exon3	c.T273G	p.A91A	.	.	121	40	127	0	.	144
TAB3	257397	bcgsc.ca	37	X	30864763	30864763	+	Splice_Site	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	TAB3	NM_152787	exon9	c.1711-2A>G	.	.	.	72	4	64	0	.	131
TAOK2	9344	bcgsc.ca	37	16	29998852	29998852	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	TAOK2	NM_016151	exon16	c.C3259T	p.R1087W	.	.	73	31	76	0	.	521
TARS2	80222	bcgsc.ca	37	1	150471707	150471707	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	TARS2	NM_025150	exon13	c.C1555G	p.L519V	.	.	116	54	78	0	.	91
TARSL2	123283	bcgsc.ca	37	15	102224289	102224289	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	TARSL2	NM_152334	exon12	c.A1639T	p.T547S	.	.	153	43	154	0	.	92
TDG	6996	bcgsc.ca	37	12	104379508	104379508	+	Splice_Site	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	TDG	NM_003211	exon9	c.1090+2T>C	.	.	.	93	27	129	0	.	661
TDP1	55775	bcgsc.ca	37	14	90433726	90433726	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	TDP1	NM_018319	exon5	c.G619T	p.D207Y	.	.	197	87	271	0	.	92
TEX15	56154	bcgsc.ca	37	8	30705230	30705230	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	TEX15	NM_031271	exon1	c.A1304G	p.E435G	.	.	81	4	109	0	.	97
TKTL2	84076	bcgsc.ca	37	4	164393283	164393283	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	TKTL2	NM_032136	exon1	c.T1604A	p.V535D	.	.	144	38	108	0	.	95
TMEM254	80195	bcgsc.ca	37	10	81838495	81838495	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	.	NM_001270373	exon1	c.A40C	p.S14R	.	.	36	10	39	0	.	.
TNR	7143	bcgsc.ca	37	1	175348689	175348689	+	Silent	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	TNR	NM_003285	exon9	c.A1962G	p.T654T	.	.	169	24	95	0	.	324
TOP2A	7153	bcgsc.ca	37	17	38572733	38572733	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	TOP2A	NM_001067	exon3	c.T209C	p.I70T	.	.	73	4	138	0	.	655
TRIM46	80128	bcgsc.ca	37	1	155148089	155148089	+	Silent	SNP	C	C	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	TRIM46	NM_025058	exon2	c.C291A	p.P97P	.	.	84	31	56	0	.	228
TRIM6-TRIM34	445372	bcgsc.ca	37	11	5664784	5664784	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	TRIM6-TRIM34	NM_001003819	exon14	c.G2374A	p.D792N	.	.	218	13	222	0	.	45
TRPM6	140803	bcgsc.ca	37	9	77347631	77347631	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	TRPM6	NM_017662	exon37	c.A5798G	p.D1933G	.	.	119	6	152	1	.	335
TRPM6	140803	bcgsc.ca	37	9	77386643	77386643	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	TRPM6	NM_017662	exon25	c.A3512G	p.E1171G	.	.	88	4	80	0	.	335
TSNARE1	203062	bcgsc.ca	37	8	143399967	143399967	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	TSNARE1	NM_145003	exon7	c.A922G	p.T308A	.	.	64	4	65	0	.	90
TSPAN10	83882	bcgsc.ca	37	17	79612397	79612397	+	Missense_Mutation	SNP	A	A	G	rs6420484	byfrequency	TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	TSPAN10	.	.	.	.	.	.	28	9	31	1	A|0.212;G|0.788	23
TTLL11	158135	bcgsc.ca	37	9	124855592	124855592	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	TTLL11	NM_001139442	exon1	c.G106T	p.A36S	.	.	30	13	22	0	.	112
TTN	7273	bcgsc.ca	37	2	179448445	179448445	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	TTN	NM_001267550	exon312	c.A65464G	p.T21822A	.	.	197	6	178	0	.	636
TUSC3	7991	bcgsc.ca	37	8	15605922	15605922	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	TUSC3	NM_178234	exon9	c.T976C	p.F326L	.	.	81	4	145	0	.	516
TYRO3	7301	bcgsc.ca	37	15	41865543	41865543	+	Missense_Mutation	SNP	G	G	C	rs116540200	byfrequency;alternate_allele	TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	TYRO3_ENST00000263798,NS,carcinoma,0	TYRO3	NM_006293	exon17	c.G2023C	p.G675R	.	.	102	35	112	0	G|0.995;A|0.005	1388
UBE2K	3093	bcgsc.ca	37	4	39747379	39747379	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	UBE2K	NM_005339	exon3	c.A165T	p.R55S	.	.	172	75	269	1	.	23
UBN2	254048	bcgsc.ca	37	7	138954250	138954250	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	UBN2	NM_173569	exon8	c.A1577G	p.K526R	.	.	80	4	52	0	.	70
UBR4	23352	bcgsc.ca	37	1	19452947	19452947	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	UBR4	NM_020765	exon64	c.A9431G	p.Y3144C	.	.	210	64	257	2	.	612
UGGT2	55757	bcgsc.ca	37	13	96642227	96642227	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	UGGT2	NM_020121	exon8	c.G931A	p.D311N	.	.	76	23	54	0	.	92
UPP1	7378	bcgsc.ca	37	7	48147063	48147063	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	UPP1	NM_003364	exon8	c.C752T	p.S251F	.	.	143	31	102	0	.	514
USP22	23326	bcgsc.ca	37	17	20907597	20907597	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	USP22	NM_015276	exon12	c.C1453T	p.R485W	.	.	123	38	203	1	.	636
USP9X	8239	bcgsc.ca	37	X	40994033	40994033	+	Missense_Mutation	SNP	A	A	G	rs199539197		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	USP9X	NM_001039591	exon5	c.A378G	p.I126M	.	.	152	5	103	0	A|0.999;G|0.001	563
WDR96	80217	bcgsc.ca	37	10	105947225	105947225	+	Silent	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	WDR96	NM_025145	exon14	c.A1713G	p.R571R	.	.	103	4	74	0	.	95
WNT8B	7479	bcgsc.ca	37	10	102239648	102239648	+	Silent	SNP	C	C	T	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	WNT8B	NM_003393	exon3	c.C120T	p.S40S	.	.	71	4	82	0	.	625
ZCCHC11	23318	bcgsc.ca	37	1	52943398	52943398	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ZCCHC11	NM_015269	exon12	c.A2005G	p.R669G	.	.	121	5	107	1	.	93
ZFHX4	79776	bcgsc.ca	37	8	77690642	77690642	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ZFHX4	NM_024721	exon4	c.T3292C	p.F1098L	.	.	146	6	82	0	.	98
ZFP112	7771	bcgsc.ca	37	19	44831614	44831614	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ZFP112	NM_001083335	exon5	c.A2714G	p.H905R	.	.	58	4	79	0	.	95
ZMYND12	84217	bcgsc.ca	37	1	42914250	42914250	+	Silent	SNP	G	G	A	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ZMYND12	NM_032257	exon3	c.C312T	p.H104H	.	.	151	50	167	0	.	91
ZNF285	26974	bcgsc.ca	37	19	44891003	44891003	+	Silent	SNP	G	G	A	rs201302972		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ZNF285	NM_152354	exon4	c.C1404T	p.S468S	.	.	121	9	116	2	G|0.998;A|0.002	94
ZNF354C	30832	bcgsc.ca	37	5	178506491	178506491	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ZNF354C	NM_014594	exon5	c.A1058G	p.E353G	.	.	82	4	48	0	.	91
ZNF367	195828	bcgsc.ca	37	9	99180148	99180148	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ZNF367	NM_153695	exon1	c.T167C	p.L56P	.	.	61	4	46	0	.	90
ZNF404	342908	bcgsc.ca	37	19	44384170	44384170	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	.	NM_001033719	exon1	c.T119C	p.V40A	.	.	92	4	76	0	.	.
ZNF684	127396	bcgsc.ca	37	1	41012332	41012332	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ZNF684	NM_152373	exon5	c.A337G	p.M113V	.	.	76	32	88	0	.	90
ZNF778	197320	bcgsc.ca	37	16	89293512	89293512	+	Silent	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	.	NM_001201407	exon7	c.T816C	p.V272V	.	.	81	4	90	0	.	.
ZNF829	374899	bcgsc.ca	37	19	37383205	37383205	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ZNF829	NM_001171979	exon6	c.A731G	p.K244R	.	.	60	4	59	0	.	90
ZRANB1	54764	bcgsc.ca	37	10	126662855	126662855	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ZRANB1	NM_017580	exon5	c.A1315G	p.T439A	.	.	151	5	143	0	.	660
ZW10	9183	bcgsc.ca	37	11	113631637	113631637	+	Missense_Mutation	SNP	G	G	A	rs140270550	byfrequency	TCGA-G3-A3CG-01A-11D-A20W-10	TCGA-G3-A3CG-10A-01D-A20W-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	cfe8bcb2-95a5-43cc-97e1-ee6c7ed87731	d9577f26-985f-433d-becb-50301258d4d6	.	ZW10	NM_004724	exon3	c.C244T	p.R82C	.	.	65	33	73	0	G|0.999;A|0.001	228
