Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	TranscriptID	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov_SOL	TVarCov_SOL	NTotCov_SOL	NVarCov_SOL	dbSNPPopFreq	COSMIC_Gene_Freq
A2ML1	144568	bcgsc.ca;mdanderson.org	37	12	8994020	8994020	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	A2ML1	NM_144670	exon11	c.T1136A	p.V379E	.	.	71	26	77	2	.	93
ABCA13	154664	bcgsc.ca	37	7	48287959	48287959	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ABCA13	NM_152701	exon14	c.C1783A	p.L595I	.	.	64	6	94	0	.	521
ABCA13	154664	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	7	48431663	48431663	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ABCA13	NM_152701	exon38	c.G11800T	p.E3934X	.	.	56	21	67	0	.	521
ABCA5	23461	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	67287403	67287403	+	Silent	SNP	C	C	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ABCA5	NM_018672	exon11	c.G1560A	p.K520K	.	.	58	18	101	0	.	93
ACTR6	64431	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	100594687	100594687	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ACTR6	NM_022496	exon1	c.G58A	p.E20K	.	.	43	11	43	0	.	91
ADAM18	8749	broad.mit.edu;bcgsc.ca	37	8	39505935	39505935	+	Silent	SNP	G	G	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ADAM18	NM_014237	exon12	c.G1119A	p.E373E	.	.	158	12	167	1	.	228
ADAM18	8749	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	8	39505913	39505913	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ADAM18	NM_014237	exon12	c.G1097C	p.R366T	.	.	163	12	146	0	.	228
ADAM9	8754	bcgsc.ca	37	8	38869196	38869196	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ADAM9	NM_003816	exon3	c.C215A	p.A72D	.	.	80	6	76	0	.	227
ADARB1	104	ucsc.edu	37	21	46624623	46624623	+	Silent	SNP	C	C	A	rs141463450	byfrequency;alternate_allele	TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ADARB1	NM_015834	exon10	c.C1839A	p.L613L	.	.	44	4	48	0	C|0.999;G|0.001	91
ADCY6	112	mdanderson.org	37	12	49170958	49170958	+	Silent	SNP	C	C	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ADCY6	NM_020983	exon6	c.G1305A	p.G435G	.	.	9	3	14	0	.	90
ADH1A	124	ucsc.edu	37	4	100203572	100203572	+	Silent	SNP	C	C	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ADH1A	NM_000667	exon6	c.G759A	p.E253E	.	.	151	1	224	12	.	227
ADRA1A	148	ucsc.edu;bcgsc.ca	37	8	26627995	26627995	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ADRA1A	NM_033303	exon2	c.T1072C	p.Y358H	.	.	28	4	43	0	.	587
AGBL2	79841	ucsc.edu	37	11	47684615	47684615	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	AGBL2	NM_024783	exon18	c.C2498A	p.A833D	.	.	36	4	42	0	.	92
AIRE	326	ucsc.edu	37	21	45709898	45709898	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	AIRE	NM_000383	exon7	c.C826T	p.Q276X	.	.	38	4	56	0	.	91
AKAP4	8852	broad.mit.edu;bcgsc.ca	37	X	49957907	49957907	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	AKAP4	NM_003886	exon5	c.C1457A	p.P486Q	.	.	53	39	60	2	.	540
AMOTL2	51421	broad.mit.edu;ucsc.edu;mdanderson.org	37	3	134076549	134076549	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	AMOTL2	NM_016201	exon10	c.T2341G	p.X781G	.	.	33	5	44	0	.	135
ANKRD26	22852	ucsc.edu	37	10	27389055	27389055	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ANKRD26	NM_014915	exon1	c.G201T	p.L67F	.	.	36	4	50	0	.	138
AQPEP	0	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	115323605	115323605	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	.	NM_173800	exon4	c.G1074C	p.L358F	.	.	95	13	186	0	.	.
ARHGAP15	55843	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	144314011	144314011	+	Silent	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ARHGAP15	NM_018460	exon11	c.C960A	p.G320G	.	.	50	24	68	1	.	653
ARNT2	9915	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	80762629	80762629	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ARNT2	NM_014862	exon4	c.A265G	p.M89V	.	.	20	8	50	0	.	175
ASAP3	55616	ucsc.edu	37	1	23760842	23760842	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ASAP3	NM_017707	exon19	c.C1856A	p.A619D	.	.	36	4	63	0	.	155
ASCC3	10973	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	101166124	101166124	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ASCC3	NM_006828	exon12	c.G1906A	p.E636K	.	.	49	19	75	0	.	96
ATMIN	23300	bcgsc.ca	37	16	81077518	81077518	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ATMIN	NM_015251	exon4	c.T1415C	p.I472T	.	.	55	40	95	2	.	68
ATP2C2	9914	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	16	84444352	84444352	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ATP2C2	NM_014861	exon6	c.G496T	p.V166F	.	.	31	16	36	0	.	91
ATP8A2	51761	broad.mit.edu	37	13	26434361	26434361	+	Silent	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ATP8A2	NM_016529	exon31	c.C2985A	p.T995T	.	.	158	5	210	0	.	138
ATPIF1	93974	ucsc.edu	37	1	28562897	28562897	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ATPIF1	NM_178191	exon2	c.G113T	p.G38V	.	.	32	4	36	0	.	90
ATRX	546	broad.mit.edu	37	X	76890171	76890171	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ATRX	NM_000489	exon17	c.T4723A	p.C1575S	.	.	100	5	97	0	.	248
AURKB	9212	ucsc.edu	37	17	8109873	8109873	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	AURKB	NM_004217	exon7	c.T622A	p.L208I	.	.	32	4	47	0	.	1508
AUTS2	26053	ucsc.edu	37	7	70255152	70255152	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	AUTS2	NM_015570	exon19	c.G2950T	p.E984X	.	.	20	4	16	0	.	92
BCL2L13	23786	bcgsc.ca	37	22	18210145	18210145	+	Missense_Mutation	SNP	C	C	T	rs139273724		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	BCL2L13	NM_001270726	exon6	c.C1375T	p.P459S	.	.	40	5	53	0	C|1.000;T|0.000	652
BCR	613	ucsc.edu	37	22	23603631	23603631	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	BCR	NM_021574	exon4	c.G1656T	p.E552D	.	.	42	4	39	0	.	1349
BIRC6	57448	broad.mit.edu	37	2	32716623	32716623	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	BIRC6	NM_016252	exon44	c.C8338A	p.Q2780K	.	.	56	4	69	0	.	233
C10orf11	83938	broad.mit.edu;bcgsc.ca;mdanderson.org	37	10	77795792	77795792	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	C10orf11	NM_032024	exon2	c.G74A	p.R25K	.	.	33	14	56	1	.	90
C22orf28	51493	ucsc.edu	37	22	32808117	32808117	+	Silent	SNP	C	C	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	C22orf28	NM_014306	exon1	c.G27A	p.L9L	.	.	27	4	27	0	.	90
C4orf21	55345	ucsc.edu	37	4	113505262	113505262	+	Silent	SNP	G	G	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	C4orf21	NM_018392	exon15	c.C4170T	p.D1390D	.	.	43	4	58	0	.	90
C9orf156	51531	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	100667207	100667207	+	Silent	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	C9orf156	NM_016481	exon5	c.G1134T	p.V378V	.	.	28	5	38	0	.	90
CABLES1	91768	ucsc.edu	37	18	20833765	20833765	+	Silent	SNP	C	C	T	rs201602276		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	CABLES1	NM_001100619	exon9	c.C1626T	p.F542F	.	.	41	5	43	0	C|0.999;T|0.001	522
CACNG7	59284	ucsc.edu	37	19	54444743	54444743	+	Silent	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	CACNG7	NM_031896	exon4	c.C444A	p.G148G	.	.	27	4	46	0	.	91
CAPN12	147968	ucsc.edu	37	19	39232537	39232537	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	CAPN12	NM_144691	exon4	c.G440T	p.G147V	.	.	18	4	15	0	.	91
CBX4	8535	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	17	77808471	77808471	+	Missense_Mutation	SNP	G	G	A	rs138355116		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	CBX4,abdomen,malignant_melanoma,0	CBX4	NM_003655	exon5	c.C970T	p.P324S	.	.	27	11	39	0	.	228
CDAN1	146059	ucsc.edu	37	15	43022917	43022917	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	CDAN1	NM_138477	exon14	c.C2053T	p.Q685X	.	.	21	4	58	0	.	92
CDHR5	53841	ucsc.edu	37	11	619056	619056	+	Silent	SNP	G	G	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	CDHR5	NM_021924	exon13	c.C1503T	p.G501G	.	.	16	3	25	0	.	90
CDRT1	374286	broad.mit.edu;bcgsc.ca;mdanderson.org	37	17	15522794	15522794	+	Silent	SNP	G	G	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	CDRT1	NM_006382	exon1	c.C33T	p.A11A	.	.	93	35	174	1	.	68
CFI	3426	broad.mit.edu;bcgsc.ca	37	4	110682850	110682850	+	Splice_Site	SNP	T	T	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	CFI	NM_000204	exon5	c.483-2A>T	.	.	.	14	7	29	0	.	90
CGN	57530	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	151502577	151502577	+	Silent	SNP	C	C	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	CGN	NM_020770	exon12	c.C2299T	p.L767L	.	.	69	9	56	0	.	93
CHD5	26038	ucsc.edu	37	1	6195434	6195434	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	CHD5	NM_015557	exon18	c.C2726T	p.A909V	.	.	34	4	39	0	.	719
CHDH	55349	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	53851908	53851908	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	CHDH	NM_018397	exon9	c.A1681G	p.I561V	.	.	56	25	88	0	.	91
CLEC2A	387836	ucsc.edu;mdanderson.org	37	12	10066275	10066275	+	Nonsense_Mutation	SNP	C	C	A	rs115598241	byfrequency;alternate_allele	TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	.	NM_001130711	exon5	c.G415T	p.E139X	.	.	20	4	18	0	C|0.984;G|0.016	.
CNTNAP3B	728577	broad.mit.edu	37	9	43737465	43737465	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	.	NM_001201380	exon3	c.T335G	p.M112R	.	.	109	67	97	1	.	.
COL4A6	1288	ucsc.edu	37	X	107433703	107433703	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	COL4A6	NM_001847	exon20	c.C1348A	p.L450I	.	.	22	4	31	0	.	199
COL5A1	1289	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	137630354	137630354	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	COL5A1	NM_000093	exon10	c.G1424A	p.G475D	.	.	40	26	37	0	.	524
COPA	1314	ucsc.edu	37	1	160262375	160262375	+	Silent	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	COPA	NM_001098398	exon28	c.C2886A	p.G962G	.	.	39	4	39	0	.	92
CPNE9	151835	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	9759770	9759770	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	CPNE9	.	.	.	.	.	.	40	15	59	0	.	70
CUBN	8029	broad.mit.edu;ucsc.edu	37	10	16870834	16870834	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	CUBN	NM_001081	exon66	c.C10734A	p.S3578R	.	.	45	4	55	1	.	166
CXorf64	100130613	broad.mit.edu;bcgsc.ca;mdanderson.org	37	X	125955203	125955203	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	.	NM_001122716	exon2	c.G582C	p.E194D	.	.	43	31	47	1	.	.
CYP27B1	1594	ucsc.edu	37	12	58158311	58158311	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	CYP27B1	NM_000785	exon6	c.C986A	p.A329D	.	.	36	4	38	0	.	514
D2HGDH	728294	ucsc.edu	37	2	242689576	242689576	+	Silent	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	.	NM_152783	exon7	c.C864A	p.G288G	.	.	41	4	62	1	.	.
DDR1	780	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	30866689	30866689	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	DDR1	NM_013994	exon16	c.G2494T	p.V832L	.	.	78	31	83	0	.	1403
DERL3	91319	ucsc.edu	37	22	24179889	24179889	+	Silent	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	DERL3	NM_001135751	exon5	c.C480A	p.G160G	.	.	20	4	44	0	.	91
DIP2C	22982	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	375432	375432	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	DIP2C	NM_014974	exon30	c.T3694C	p.S1232P	.	.	16	7	30	0	.	156
DNAJB5	25822	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	34993331	34993331	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	DNAJB5	NM_001135004	exon3	c.A443C	p.D148A	.	.	43	16	46	0	.	226
DOCK6	57572	ucsc.edu	37	19	11314908	11314908	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	DOCK6	NM_020812	exon40	c.C5188A	p.L1730M	.	.	42	4	34	0	.	93
DSPP	1834	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	88535262	88535262	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	DSPP	NM_014208	exon5	c.A1448G	p.N483S	.	.	37	24	87	0	.	90
DUSP12	11266	ucsc.edu	37	1	161719609	161719609	+	Silent	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	DUSP12	NM_007240	exon1	c.C18A	p.G6G	.	.	35	4	26	0	.	226
DYNC1H1	1778	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	102446826	102446826	+	Silent	SNP	T	T	G	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	DYNC1H1	NM_001376	exon5	c.T900G	p.T300T	.	.	28	11	50	0	.	98
ECD	11319	broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	74912126	74912126	+	Silent	SNP	T	T	G	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ECD	NM_001135752	exon7	c.A837C	p.P279P	.	.	44	9	46	0	.	91
ENDOG	2021	broad.mit.edu;ucsc.edu	37	9	131584861	131584861	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ENDOG	NM_004435	exon3	c.T866G	p.L289R	.	.	25	5	24	0	.	90
EPHA7	2045	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	94120578	94120578	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	EPHA7	NM_004440	exon3	c.G473A	p.G158D	.	.	80	28	131	0	.	1453
FAHD2B	151313	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	97751541	97751541	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	FAHD2B	NM_199336	exon5	c.C580T	p.R194C	.	.	98	44	137	0	.	90
FAM13C	220965	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	61028335	61028335	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	FAM13C	NM_198215	exon8	c.T920C	p.F307S	.	.	66	13	92	0	.	70
FAM200B	285550	broad.mit.edu	37	4	15689578	15689578	+	Silent	SNP	T	T	C	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	.	NM_001145191	exon2	c.T978C	p.C326C	.	.	108	5	130	0	.	.
FCGR1A	2209	broad.mit.edu;bcgsc.ca	37	1	149755799	149755799	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	FCGR1A	NM_000566	exon3	c.T293A	p.L98Q	.	.	294	91	331	0	.	23
FIGN	55137	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	164468244	164468244	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	FIGN	NM_018086	exon3	c.G98C	p.R33P	.	.	64	21	77	1	.	156
FN1	2335	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	216256381	216256381	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	FN1	NM_212482	exon26	c.C4226A	p.P1409H	.	.	66	21	44	0	.	584
FRAS1	80144	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	79295351	79295351	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	FRAS1	NM_001166133	exon25	c.G3097T	p.V1033F	.	.	33	21	59	0	.	68
FREM2	341640	hgsc.bcm.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	39263789	39263789	+	Missense_Mutation	SNP	G	G	T	rs7327915	byfrequency;alternate_allele	TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	FREM2	NM_207361	exon1	c.G2308T	p.V770L	.	.	35	18	52	0	G|0.960;A|0.040	100
FRMD4A	55691	broad.mit.edu;bcgsc.ca;mdanderson.org	37	10	13699408	13699408	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	FRMD4A	NM_018027	exon22	c.C2181A	p.S727R	.	.	25	10	18	0	.	229
GABRR2	2570	broad.mit.edu	37	6	90024802	90024802	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	GABRR2	NM_002043	exon1	c.G83A	p.W28X	.	.	88	4	128	1	.	68
GATA4	2626	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	11615852	11615852	+	Silent	SNP	C	C	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	GATA4	NM_002052	exon7	c.C1197T	p.V399V	.	.	40	15	43	0	.	90
GCLM	2730	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	94354618	94354618	+	Silent	SNP	C	C	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	GCLM	NM_002061	exon7	c.G753A	p.S251S	.	.	47	19	73	0	.	91
GDPD3	79153	ucsc.edu;bcgsc.ca;mdanderson.org	37	16	30116234	30116234	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	GDPD3	NM_024307	exon10	c.C916A	p.H306N	.	.	30	5	32	0	.	90
GPC5	2262	broad.mit.edu;bcgsc.ca;mdanderson.org	37	13	92797096	92797096	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	GPC5	NM_004466	exon7	c.G1415T	p.R472I	.	.	59	19	80	2	.	519
GPR124	25960	broad.mit.edu;ucsc.edu	37	8	37691506	37691506	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	GPR124	NM_032777	exon11	c.A1468G	p.M490V	.	.	48	5	56	0	.	157
GPR98	84059	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	89948314	89948314	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	GPR98	NM_032119	exon19	c.C3568T	p.H1190Y	.	.	72	39	148	0	.	103
GPRASP1	9737	ucsc.edu	37	X	101909929	101909929	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	GPRASP1	NM_001099411	exon3	c.C1088A	p.A363D	.	.	27	4	17	0	.	131
GREB1	9687	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	11716535	11716535	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	GREB1	NM_148903	exon5	c.T511C	p.F171L	.	.	165	37	147	0	.	91
GUF1	60558	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	44693809	44693809	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	GUF1	NM_021927	exon13	c.T1606C	p.Y536H	.	.	41	15	59	0	.	91
HELT	391723	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	4	185941802	185941802	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	HELT	NM_001029887	exon4	c.C860T	p.A287V	.	.	16	13	11	0	.	226
HEPACAM2	253012	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	92837990	92837990	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	HEPACAM2	NM_001039372	exon4	c.A915T	p.K305N	.	.	97	32	134	0	.	157
HERC5	51191	ucsc.edu	37	4	89400576	89400576	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	HERC5	NM_016323	exon13	c.G1655T	p.C552F	.	.	42	4	85	0	.	664
HKDC1	80201	ucsc.edu	37	10	71000487	71000487	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	HKDC1	NM_025130	exon6	c.G671A	p.C224Y	.	.	44	4	65	0	.	95
HSP90AA1	3320	bcgsc.ca	37	14	102548666	102548670	+	Frame_Shift_Del	DEL	GTTGA	GTTGA	-	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	GTTGA	GTTGA	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	HSP90AA1	NM_001017963	exon11	c.2233_2237del	p.745_746del	.	.	64	22	81	1	.	949
IFT46	56912	ucsc.edu	37	11	118422512	118422512	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	IFT46	NM_020153	exon10	c.C814A	p.L272I	.	.	34	4	42	0	.	90
IMPG1	3617	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	76720891	76720891	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	IMPG1	NM_001563	exon8	c.A858T	p.L286F	.	.	86	36	116	0	.	93
INPPL1	3636	broad.mit.edu;bcgsc.ca;mdanderson.org	37	11	71943737	71943737	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	INPPL1	NM_001567	exon15	c.G1780T	p.D594Y	.	.	38	10	41	1	.	660
INSL4	3641	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	5231621	5231621	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	INSL4	NM_002195	exon1	c.C98A	p.P33H	.	.	48	11	55	0	.	90
INTS4	92105	ucsc.edu	37	11	77594957	77594957	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	INTS4	NM_033547	exon22	c.G2634T	p.K878N	.	.	30	4	39	0	.	92
IPO8	10526	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	30816574	30816574	+	Silent	SNP	A	A	C	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	IPO8	NM_006390	exon14	c.T1443G	p.L481L	.	.	28	13	22	0	.	227
IPO8	10526	ucsc.edu	37	12	30816503	30816503	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	IPO8	NM_006390	exon14	c.G1514T	p.S505I	.	.	43	5	51	0	.	227
ITGB4	3691	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	73723340	73723340	+	Missense_Mutation	SNP	G	G	T	rs146966502	alternate_allele	TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ITGB4	NM_001005731	exon3	c.G145T	p.A49S	.	.	36	11	46	0	G|1.000;A|0.000	227
ITPKB	3707	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	226923399	226923399	+	Silent	SNP	T	T	G	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ITPKB	NM_002221	exon2	c.A1761C	p.G587G	.	.	40	15	40	0	.	230
ITPR3	3710	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	33639857	33639857	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ITPR3	NM_002224	exon22	c.T2780C	p.M927T	.	.	31	11	33	0	.	1085
KHDC3L	154288	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	6	74072886	74072886	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	.	NM_001017361	exon2	c.G238T	p.D80Y	.	.	33	11	43	0	.	.
KHDC3L	154288	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	74072885	74072885	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	.	NM_001017361	exon2	c.G237T	p.L79F	.	.	32	10	43	0	.	.
KIAA1161	57462	ucsc.edu	37	9	34370904	34370904	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	KIAA1161	.	.	.	.	.	.	25	4	27	0	.	136
KIF21B	23046	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	200945972	200945972	+	Silent	SNP	G	G	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	KIF21B	NM_001252102	exon32	c.C4375T	p.L1459L	.	.	33	13	52	0	.	96
KIF4B	285643	ucsc.edu	37	5	154396839	154396839	+	Silent	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	KIF4B	NM_001099293	exon1	c.C3420A	p.G1140G	.	.	37	4	56	0	.	1
KLHL25	64410	ucsc.edu	37	15	86311896	86311896	+	Silent	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	KLHL25	NM_022480	exon2	c.C1146A	p.G382G	.	.	29	4	36	0	.	92
KRTAP10-2	386679	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	21	45970816	45970816	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	KRTAP10-2	NM_198693	exon1	c.T526A	p.S176T	.	.	18	7	25	0	.	135
LENG8	114823	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	54966690	54966690	+	Silent	SNP	G	G	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	LENG8	NM_052925	exon8	c.G969A	p.A323A	.	.	22	8	25	0	.	91
LOC341056	0	bcgsc.ca	37	11	122889156	122889156	+	RNA	SNP	C	C	G	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	.	.	.	.	.	.	.	18	7	21	0	.	.
LRCH4	4034	ucsc.edu	37	7	100172744	100172744	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	LRCH4	NM_002319	exon18	c.C2038A	p.L680I	.	.	31	5	38	0	.	136
LY6G6C	80740	ucsc.edu	37	6	31687059	31687059	+	Silent	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	LY6G6C	NM_025261	exon3	c.C192A	p.R64R	.	.	48	4	66	0	.	90
MAP2K1	5604	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	66729188	66729188	+	Silent	SNP	G	G	A	rs139364105		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	MAP2K1	NM_002755	exon3	c.G396A	p.A132A	.	.	27	17	39	0	G|0.999;A|0.001	978
MAP2K4P1	139201	bcgsc.ca	37	X	72745734	72745734	+	RNA	DEL	T	T	-	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	.	.	.	.	.	.	.	38	30	29	1	.	.
MAP3K7	6885	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	91269811	91269811	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	MAP3K7	NM_145333	exon5	c.G466T	p.D156Y	.	.	93	46	169	0	.	980
MARK2	2011	ucsc.edu	37	11	63670178	63670178	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	MARK2	NM_001163296	exon13	c.C1340A	p.A447D	.	.	41	4	35	0	.	766
MAS1L	116511	ucsc.edu	37	6	29454833	29454833	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	MAS1L	NM_052967	exon1	c.G847A	p.A283T	.	.	30	4	38	0	.	527
MIR1229	100302156	ucsc.edu;mdanderson.org	37	5	179225293	179225293	+	RNA	SNP	G	G	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	.	.	.	.	.	.	.	19	9	14	0	.	.
MKL2	57496	ucsc.edu	37	16	14346284	14346284	+	Silent	SNP	C	C	A	rs200315248	alternate_allele	TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	MKL2	NM_014048	exon15	c.C2478A	p.V826V	.	.	26	4	43	0	C|0.999;T|0.000	95
MUT	4594	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	49427174	49427174	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	MUT	NM_000255	exon2	c.A6T	p.L2F	.	.	18	8	28	0	.	91
MYH7	4625	ucsc.edu	37	14	23902875	23902875	+	Silent	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	MYH7	NM_000257	exon3	c.C67A	p.R23R	.	.	46	4	53	0	.	94
MYH9	4627	ucsc.edu;bcgsc.ca;mdanderson.org	37	22	36689429	36689429	+	Silent	SNP	C	C	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	MYH9	NM_002473	exon30	c.G4041A	p.E1347E	.	.	18	4	26	0	.	292
MYO1G	64005	ucsc.edu	37	7	45007230	45007230	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	MYO1G	NM_033054	exon14	c.G1756T	p.A586S	.	.	30	4	39	0	.	137
MYO3A	53904	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	10	26462717	26462717	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	MYO3A	NM_017433	exon30	c.3524delC	p.T1175fs	.	.	61	27	75	0	.	1007
NBEAL2	23218	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	47040281	47040281	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	NBEAL2	NM_015175	exon23	c.A3296G	p.E1099G	.	.	31	9	48	1	.	69
ND3	0	bcgsc.ca	37	MT	10086	10086	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	.	ENST00000361227	exon1	c.A28C	p.N10H	.	.	471	67	152	0	.	.
NELFB	25920	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	140158810	140158810	+	Splice_Site	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	.	NM_015456	exon6	c.896+1G>T	.	.	.	30	19	22	0	.	.
NFXL1	152518	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	4	47850329	47850329	+	Nonsense_Mutation	SNP	T	T	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	NFXL1	NM_152995	exon23	c.A2587T	p.R863X	.	.	114	36	146	0	.	524
NGFR	4804	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	47587941	47587941	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	NGFR	NM_002507	exon4	c.G736C	p.G246R	.	.	30	15	33	0	.	947
NPY5R	4889	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	164272303	164272303	+	Missense_Mutation	SNP	C	C	T	rs146231711		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	NPY5R	NM_006174	exon4	c.C878T	p.T293I	.	.	15	9	55	0	C|1.000;T|0.000	523
NTRK1	4914	broad.mit.edu;bcgsc.ca	37	1	156843727	156843727	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	NTRK1	NM_001012331	exon8	c.T1153C	p.F385L	.	.	76	26	67	2	.	1393
NUP205	23165	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	135300725	135300725	+	Silent	SNP	A	A	G	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	NUP205	NM_015135	exon24	c.A3372G	p.L1124L	.	.	48	11	83	1	.	207
NUP210L	91181	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	154067567	154067567	+	Silent	SNP	C	C	G	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	NUP210L	NM_001159484	exon15	c.G2031C	p.G677G	.	.	60	23	98	1	.	77
NXF3	56000	broad.mit.edu	37	X	102334285	102334285	+	Splice_Site	SNP	A	A	G	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	NXF3	NM_022052	exon16	c.1335+2T>C	.	.	.	120	6	159	1	.	205
OBSCN	84033	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	228496800	228496800	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	OBSCN	NM_001271223	exon59	c.C15611T	p.A5204V	.	.	25	11	29	0	.	403
OGG1	4968	ucsc.edu;bcgsc.ca	37	3	9792767	9792767	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	OGG1	NM_016819	exon2	c.G276T	p.E92D	.	.	52	5	56	0	.	660
OR10T2	128360	broad.mit.edu;bcgsc.ca;mdanderson.org	37	1	158368833	158368833	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	OR10T2	NM_001004475	exon1	c.G424T	p.G142W	.	.	57	21	71	2	.	70
OR4C46	119749	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	51515655	51515655	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	OR4C46	NM_001004703	exon1	c.G374T	p.C125F	.	.	70	38	100	0	.	69
PAK3	5063	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	110416299	110416299	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	PAK3	NM_001128168	exon9	c.A928G	p.I310V	.	.	97	81	103	1	.	1043
PAX2	5076	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	102584502	102584502	+	Silent	SNP	G	G	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	PAX2	NM_003987	exon9	c.G1086A	p.V362V	.	.	21	9	21	0	.	90
PCDH1	5097	ucsc.edu	37	5	141242953	141242953	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	PCDH1	NM_032420	exon3	c.G2943T	p.Q981H	.	.	39	5	62	0	.	95
PCDH15	65217	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	55568699	55568699	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	PCDH15	.	.	.	.	.	.	105	50	162	0	.	193
PCDHA7	56141	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	140215989	140215989	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	PCDHA7	NM_031852	exon1	c.A2021T	p.Q674L	.	.	24	15	26	0	.	94
PCDHAC1	56135	ucsc.edu	37	5	140306529	140306529	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	PCDHAC1	NM_031882	exon1	c.G52T	p.A18S	.	.	30	4	59	0	.	28
PCDHB10	56126	hgsc.bcm.edu;broad.mit.edu;mdanderson.org	37	5	140573688	140573688	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	PCDHB10	NM_018930	exon1	c.C1563A	p.Y521X	.	.	59	17	71	0	.	92
PCLO	27445	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	82531973	82531973	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	PCLO	NM_014510	exon9	c.G13522A	p.V4508I	.	.	78	27	119	0	.	29
PDZD7	79955	broad.mit.edu;bcgsc.ca;mdanderson.org	37	10	102782138	102782138	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	PDZD7	NM_001195263	exon5	c.G547T	p.D183Y	.	.	25	13	37	1	.	136
PIK3R1	5295	ucsc.edu	37	5	67569801	67569801	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	PIK3R1	NM_181523	exon4	c.C462A	p.S154R	.	.	35	4	62	1	.	4332
PLD4	122618	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	105398614	105398614	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	PLD4	NM_138790	exon10	c.G1243T	p.V415L	.	.	34	13	39	0	.	651
POLQ	10721	broad.mit.edu	37	3	121264604	121264604	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	POLQ	NM_199420	exon1	c.C121A	p.P41T	.	.	16	4	19	0	.	664
POU2F2	5452	ucsc.edu	37	19	42603926	42603926	+	Silent	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	POU2F2	NM_002698	exon6	c.C351A	p.G117G	.	.	25	4	35	0	.	227
PPFIBP1	8496	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	27787982	27787982	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	PPFIBP1	NM_003622	exon4	c.A204T	p.E68D	.	.	91	33	78	0	.	228
PRDM9	56979	ucsc.edu	37	5	23517988	23517988	+	Splice_Site	SNP	A	A	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	PRDM9	NM_020227	exon5	c.302-2A>T	.	.	.	41	4	37	0	.	139
PRSS50	29122	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	46755757	46755757	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	PRSS50	NM_013270	exon4	c.G705T	p.K235N	.	.	39	20	31	0	.	90
PTX3	5806	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	157160183	157160183	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	PTX3	NM_002852	exon3	c.G561A	p.M187I	.	.	34	11	27	0	.	514
QARS	5859	ucsc.edu	37	3	49136067	49136067	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	QARS	NM_005051	exon20	c.C1922T	p.T641I	.	.	37	4	39	0	.	91
QRICH2	84074	ucsc.edu	37	17	74276498	74276498	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	QRICH2	NM_032134	exon11	c.G3998T	p.S1333I	.	.	39	4	68	1	.	94
RANBP17	64901	ucsc.edu	37	5	170669769	170669769	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	RANBP17	NM_022897	exon24	c.G2721T	p.E907D	.	.	43	4	85	0	.	524
RHBDF1	64285	ucsc.edu	37	16	113695	113695	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	RHBDF1	NM_022450	exon4	c.C352A	p.P118T	.	.	25	4	39	0	.	92
RINT1	60561	broad.mit.edu;ucsc.edu	37	7	105189009	105189009	+	Nonsense_Mutation	SNP	T	T	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	RINT1	NM_021930	exon7	c.T848A	p.L283X	.	.	62	6	88	0	.	517
RNF135	84282	broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	29326075	29326075	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	RNF135	NM_032322	exon5	c.T1165C	p.F389L	.	.	54	5	66	0	.	227
RNF149	284996	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	101911551	101911551	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	RNF149	NM_173647	exon2	c.A553G	p.I185V	.	.	66	14	89	0	.	290
RPL18	6141	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	19	49121059	49121059	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	RPL18	NM_000979	exon2	c.C79A	p.L27M	.	.	42	27	46	0	.	90
RPP40	10799	broad.mit.edu;bcgsc.ca	37	6	5000046	5000050	+	Frame_Shift_Del	DEL	ATTTC	ATTTC	-	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	ATTTC	ATTTC	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	RPP40	NM_006638	exon4	c.426_430del	p.142_144del	.	.	93	9	122	0	.	90
RUNX1T1	862	bcgsc.ca	37	8	93017488	93017488	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	RUNX1T1	NM_001198679	exon6	c.G773T	p.C258F	.	.	50	6	58	0	.	1196
RYR1	6261	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	38960151	38960151	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	RYR1	NM_001042723	exon27	c.G3763A	p.E1255K	.	.	19	13	29	0	.	100
RYR2	6262	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	237711846	237711846	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	RYR2	NM_001035	exon26	c.G3022T	p.A1008S	.	.	56	16	74	1	.	158
RYR3	6263	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	33895514	33895514	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	RYR3	NM_001243996	exon18	c.G2113T	p.V705F	.	.	41	29	100	0	.	520
SEPT9	10801	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	75303253	75303253	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	SEPT9	NM_001113491	exon2	c.G50C	p.R17P	.	.	33	17	42	0	.	659
SETD2	29072	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	47164729	47164729	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	SETD2	NM_014159	exon3	c.A1397G	p.K466R	.	.	48	23	71	1	.	1273
SH2B3	10019	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	111885820	111885820	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	SH2B3	NM_005475	exon8	c.T1442C	p.L481P	.	.	32	9	47	0	.	91
SHD	56961	ucsc.edu	37	19	4284834	4284834	+	Nonsense_Mutation	SNP	A	A	T	rs151079090	alternate_allele	TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	SHD	NM_020209	exon4	c.A649T	p.R217X	.	.	24	4	36	0	A|1.000;G|0.000	90
SI	6476	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	164737493	164737493	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	SI	NM_001041	exon28	c.C3320A	p.P1107Q	.	.	73	23	85	0	.	104
SLC25A17	10478	mdanderson.org	37	22	41215216	41215216	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	SLC25A17	NM_006358	exon1	c.G37T	p.A13S	.	.	9	3	12	0	.	90
SLC45A3	85414	ucsc.edu	37	1	205632141	205632141	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	SLC45A3	NM_033102	exon3	c.C778A	p.L260M	.	.	33	4	30	0	.	98
SLC6A15	55117	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	85277689	85277689	+	Silent	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	SLC6A15	NM_018057	exon5	c.C705A	p.A235A	.	.	48	21	60	0	.	93
SLCO1C1	53919	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	12	20893142	20893145	+	Frame_Shift_Del	DEL	GGAA	GGAA	-	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	GGAA	GGAA	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	SLCO1C1	NM_017435	exon12	c.1573_1576del	p.525_526del	.	.	77	28	100	0	.	97
SLCO6A1	133482	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	101813521	101813521	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	SLCO6A1	NM_173488	exon3	c.G661A	p.G221S	.	.	25	17	95	0	.	96
SNX9	51429	bcgsc.ca	37	6	158342632	158342632	+	Missense_Mutation	SNP	G	G	A	rs151064442	byfrequency	TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	SNX9	NM_016224	exon10	c.G1019A	p.R340H	.	.	63	5	90	0	G|0.999;A|0.001	226
SORCS1	114815	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	108459041	108459041	+	Silent	SNP	G	G	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	SORCS1	NM_001206572	exon9	c.C1344T	p.F448F	.	.	51	19	92	0	.	153
SPATA31C2	645961	bcgsc.ca	37	9	90746827	90746827	+	Silent	SNP	A	A	G	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	.	NM_001166137	exon4	c.T1125C	p.T375T	.	.	73	38	86	0	.	.
SPHK1	8877	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	17	74382080	74382096	+	Frame_Shift_Del	DEL	GGCGTGCTCCCGCGGCC	GGCGTGCTCCCGCGGCC	-	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	GGCGTGCTCCCGCGGCC	GGCGTGCTCCCGCGGCC	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	SPHK1	NM_182965	exon3	c.283_299del	p.95_100del	.	.	28	10	32	0	.	1107
SPRR4	163778	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	152944518	152944518	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	SPRR4	NM_173080	exon2	c.A152C	p.K51T	.	.	81	8	86	0	.	68
SPTBN4	57731	ucsc.edu	37	19	41008104	41008104	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	SPTBN4	NM_020971	exon9	c.G967A	p.A323T	.	.	30	4	28	0	.	94
STAB1	23166	ucsc.edu;bcgsc.ca;mdanderson.org	37	3	52547186	52547186	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	STAB1	NM_015136	exon30	c.G3199T	p.A1067S	.	.	113	32	148	2	.	139
STARD10	10809	bcgsc.ca	37	11	72470397	72470397	+	Silent	SNP	G	G	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	STARD10	NM_006645	exon3	c.C237T	p.A79A	.	.	67	6	73	0	.	90
STEAP3	55240	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	120005515	120005515	+	Silent	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	STEAP3	NM_182915	exon4	c.C783A	p.P261P	.	.	43	21	32	0	.	91
SULF2	55959	ucsc.edu	37	20	46331374	46331374	+	Silent	SNP	G	G	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	SULF2	NM_001161841	exon4	c.C456T	p.Y152Y	.	.	41	4	44	0	.	293
SYNE2	23224	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	14	64593080	64593089	+	Frame_Shift_Del	DEL	TAAAAAATTG	TAAAAAATTG	-	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	TAAAAAATTG	TAAAAAATTG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	SYNE2	NM_182914	exon72	c.13590_13599del	p.4530_4533del	.	.	58	18	66	0	.	164
TAAR1	134864	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	132966704	132966704	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	TAAR1	NM_138327	exon1	c.A439G	p.S147G	.	.	49	17	77	0	.	90
TADA2B	93624	ucsc.edu;bcgsc.ca	37	4	7056061	7056061	+	Silent	SNP	C	C	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	TADA2B	NM_152293	exon2	c.C543T	p.A181A	.	.	52	6	54	0	.	68
TDRD6	221400	bcgsc.ca;mdanderson.org	37	6	46660241	46660241	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	TDRD6	NM_001168359	exon1	c.A4376T	p.E1459V	.	.	31	10	37	1	.	138
TEK	7010	broad.mit.edu;bcgsc.ca;mdanderson.org	37	9	27206621	27206621	+	Silent	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	TEK	NM_000459	exon15	c.C2406A	p.A802A	.	.	29	10	50	1	.	1584
TFAP2D	83741	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	50740396	50740396	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	TFAP2D	NM_172238	exon8	c.C1178T	p.A393V	.	.	48	19	63	1	.	159
THBS2	7058	ucsc.edu;bcgsc.ca;mdanderson.org	37	6	169637837	169637837	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	THBS2	NM_003247	exon9	c.G1183A	p.V395M	.	.	19	5	25	0	.	95
TLE4	7091	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	82267541	82267541	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	TLE4	NM_007005	exon7	c.C424A	p.H142N	.	.	69	16	88	0	.	524
TMEM132B	114795	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	125834213	125834213	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	TMEM132B	NM_052907	exon2	c.C268T	p.P90S	.	.	67	20	51	0	.	185
TMEM214	54867	broad.mit.edu;bcgsc.ca;mdanderson.org	37	2	27260450	27260450	+	Silent	SNP	G	G	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	TMEM214	NM_017727	exon9	c.G1032A	p.Q344Q	.	.	55	25	91	1	.	115
TMEM243	79161	ucsc.edu	37	7	86828345	86828345	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	.	NM_024315	exon2	c.G107T	p.S36I	.	.	36	4	52	0	.	.
TMPRSS7	344805	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	111764772	111764772	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	TMPRSS7	NM_001042575	exon4	c.G334C	p.D112H	.	.	151	45	177	0	.	70
TNKS1BP1	85456	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	11	57080487	57080489	+	In_Frame_Del	DEL	CCC	CCC	-	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	CCC	CCC	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	TNKS1BP1	NM_033396	exon5	c.1673_1675del	p.558_559del	.	.	43	15	68	0	.	91
TNKS	8658	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	9538246	9538246	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	TNKS	NM_003747	exon5	c.A1043T	p.E348V	.	.	121	46	143	0	.	660
TOB1	10140	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	17	48940660	48940661	+	Frame_Shift_Ins	INS	-	-	GC	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	TOB1	NM_005749	exon2	c.719_720insGC	p.P240fs	.	.	27	9	36	0	.	226
TP53	7157	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	17	7578264	7578270	+	Frame_Shift_Del	DEL	GATAAGA	GATAAGA	-	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	GATAAGA	GATAAGA	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	TP53,NS,carcinoma,-2	TP53	NM_000546	exon6	c.579_585del	p.193_195del	.	.	23	9	61	0	.	70225
TP63	8626	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	189526152	189526152	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	TP63	NM_001114979	exon4	c.C416T	p.A139V	.	.	59	15	62	0	.	421
TRAF1	7185	ucsc.edu;bcgsc.ca	37	9	123675908	123675908	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	TRAF1	NM_005658	exon5	c.G403C	p.E135Q	.	.	32	4	43	0	.	229
TRAPPC8	22878	ucsc.edu	37	18	29437886	29437886	+	Silent	SNP	T	T	C	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	TRAPPC8	NM_014939	exon20	c.A2805G	p.V935V	.	.	41	4	61	0	.	159
TRDMT1	1787	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	17202313	17202313	+	Silent	SNP	A	A	G	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	TRDMT1	NM_004412	exon6	c.T450C	p.S150S	.	.	121	38	198	0	.	227
TRIM66	9866	ucsc.edu	37	11	8646443	8646443	+	Silent	SNP	C	C	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	TRIM66	NM_014818	exon11	c.G2208A	p.G736G	.	.	31	4	42	0	.	68
TRIP10	9322	broad.mit.edu;bcgsc.ca	37	19	6750013	6750022	+	Frame_Shift_Del	DEL	AGCCCCAGAT	AGCCCCAGAT	-	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	AGCCCCAGAT	AGCCCCAGAT	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	TRIP10	NM_004240	exon11	c.1163_1172del	p.388_391del	.	.	28	9	37	0	.	228
TRPS1	7227	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	116427295	116427295	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	TRPS1	NM_014112	exon7	c.C2841A	p.N947K	.	.	122	53	173	2	.	229
TSTD2	158427	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	100365038	100365038	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	TSTD2	NM_139246	exon10	c.T1264C	p.C422R	.	.	63	26	91	0	.	92
TTLL12	23170	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	43575637	43575637	+	Silent	SNP	G	G	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	TTLL12	NM_015140	exon5	c.C828T	p.A276A	.	.	20	9	24	0	.	90
TUBB8	347688	mdanderson.org	37	10	93136	93136	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	TUBB8	NM_177987	exon4	c.C1196G	p.T399R	.	.	55	20	45	2	.	69
TUBGCP6	85378	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	50682494	50682494	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	TUBGCP6	NM_020461	exon1	c.A395G	p.Y132C	.	.	19	6	26	0	.	93
UBE2O	63893	ucsc.edu	37	17	74387235	74387235	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	UBE2O	NM_022066	exon18	c.C3668A	p.A1223E	.	.	43	4	51	0	.	272
USHBP1	83878	ucsc.edu	37	19	17373753	17373753	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	USHBP1	NM_031941	exon4	c.G250T	p.A84S	.	.	31	4	42	0	.	91
VAPA	9218	broad.mit.edu;mdanderson.org	37	18	9914271	9914271	+	Silent	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	VAPA	NM_003574	exon1	c.G18T	p.G6G	.	.	21	5	15	0	.	90
VAV1	7409	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	6833726	6833726	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	VAV1	NM_005428	exon18	c.C1713A	p.F571L	.	.	28	15	36	0	.	1276
VPS4A	27183	ucsc.edu	37	16	69354629	69354629	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	.	NM_013245	exon8	c.G808T	p.A270S	.	.	39	4	68	0	.	.
WFS1	7466	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	6303650	6303650	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	WFS1	NM_001145853	exon8	c.A2128C	p.T710P	.	.	34	11	31	0	.	91
WNK2	65268	ucsc.edu	37	9	96025881	96025881	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	WNK2	NM_006648	exon14	c.G3444T	p.E1148D	.	.	31	4	32	0	.	765
XPOT	11260	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	64814173	64814173	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	XPOT	NM_007235	exon8	c.C715A	p.L239I	.	.	72	25	76	0	.	652
ZCCHC6	79670	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	88967620	88967620	+	Silent	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ZCCHC6	NM_024617	exon2	c.G495T	p.T165T	.	.	140	37	201	0	.	92
ZFHX4	79776	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	77768145	77768145	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ZFHX4	NM_024721	exon10	c.G8988A	p.M2996I	.	.	52	20	55	0	.	98
ZNF251	90987	ucsc.edu	37	8	145947808	145947808	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ZNF251	NM_138367	exon5	c.G1237T	p.A413S	.	.	37	4	61	0	.	68
ZNF28	7576	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	53303883	53303883	+	Silent	SNP	A	A	G	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ZNF28	NM_006969	exon4	c.T1215C	p.H405H	.	.	46	30	52	0	.	91
ZNF469	84627	ucsc.edu	37	16	88505287	88505287	+	Silent	SNP	G	G	T	rs150233193	by1000genomes;alternate_allele	TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	.	NM_001127464	exon2	c.G11325T	p.G3775G	.	.	44	4	63	1	G|0.978;C|0.022	.
ZNF496	84838	ucsc.edu	37	1	247464083	247464083	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ZNF496	NM_032752	exon9	c.C1502A	p.A501E	.	.	37	4	47	0	.	91
ZNF582	147948	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	56896171	56896171	+	Silent	SNP	C	C	T	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ZNF582	NM_144690	exon5	c.G615A	p.G205G	.	.	70	16	70	0	.	138
ZNF697	90874	bcgsc.ca;mdanderson.org	37	1	120165473	120165473	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ZNF697	NM_001080470	exon3	c.G1493T	p.C498F	.	.	50	22	42	2	.	23
ZNF845	91664	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	19	53855612	53855612	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	.	NM_138374	exon4	c.1684delG	p.G562fs	.	.	45	25	53	0	.	.
ZSCAN5B	342933	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	19	56704398	56704398	+	Silent	SNP	T	T	A	novel		TCGA-G3-A7M9-01A-23D-A34Z-10	TCGA-G3-A7M9-10A-01D-A34Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6df05259-d701-492f-ab3f-5fc66ecb1c34	546c2c7d-b949-4ef6-96c8-9f2479352bf3	.	ZSCAN5B	NM_001080456	exon1	c.A24T	p.S8S	.	.	38	6	46	0	.	24
