Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	TranscriptID	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov_SOL	TVarCov_SOL	NTotCov_SOL	NVarCov_SOL	dbSNPPopFreq	COSMIC_Gene_Freq
AAK1	22848	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	2	69741794	69741794	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	AAK1	NM_014911	exon13	c.C1585A	p.Q529K	.	.	73	5	65	0	.	333
AARS	16	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	70299543	70299543	+	Silent	SNP	A	A	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	AARS	NM_001605	exon10	c.T1245C	p.Y415Y	.	.	43	32	127	0	.	91
ABCA7	10347	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	1052055	1052055	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ABCA7	NM_019112	exon22	c.G3077A	p.R1026H	.	.	49	21	61	0	.	98
ABLIM2	84448	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	8031435	8031435	+	Silent	SNP	G	G	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ABLIM2	NM_001130087	exon12	c.C1149T	p.S383S	.	.	91	23	101	0	.	47
ACAD8	27034	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	134131002	134131002	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ACAD8	NM_014384	exon7	c.A770G	p.N257S	.	.	119	29	112	0	.	90
ACAP1	9744	hgsc.bcm.edu	37	17	7240643	7240643	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ACAP1	NM_014716	exon2	c.G66T	p.E22D	.	.	88	6	150	0	.	153
ACAP2	23527	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	195013010	195013010	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ACAP2	NM_012287	exon19	c.T1937A	p.I646N	.	.	108	39	218	0	.	136
ADAM21P1	145241	broad.mit.edu;ucsc.edu;bcgsc.ca	37	14	70713155	70713155	+	RNA	SNP	C	C	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	.	.	.	.	.	.	.	103	44	137	0	.	.
AGXT	189	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	241813413	241813413	+	Missense_Mutation	SNP	C	C	T	rs180177249		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	AGXT	NM_000030	exon6	c.C614T	p.S205L	.	.	45	22	41	0	.	90
AHI1	54806	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	135715921	135715921	+	Silent	SNP	A	A	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	AHI1	NM_001134832	exon22	c.T3102G	p.T1034T	.	.	107	36	134	0	.	227
ANK1	286	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	41547821	41547821	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ANK1	NM_001142446	exon34	c.T4151A	p.L1384Q	.	.	79	37	107	0	.	716
ANKMY1	51281	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	241463387	241463387	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ANKMY1	NM_016552	exon7	c.A1480T	p.S494C	.	.	63	18	63	0	.	90
AP4M1	9179	broad.mit.edu	37	7	99701272	99701272	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	AP4M1	NM_004722	exon6	c.G500T	p.S167I	.	.	68	3	82	0	.	90
AR	367	bcgsc.ca	37	X	66765158	66765158	+	Missense_Mutation	SNP	T	T	A	rs78686797		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	AR	NM_000044	exon1	c.T170A	p.L57Q	.	.	114	10	166	1	.	661
ARHGAP31	57514	broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	119120710	119120710	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ARHGAP31	NM_020754	exon10	c.G1111A	p.G371S	.	.	143	57	199	1	.	92
ARHGAP33	115703	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	36269405	36269405	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ARHGAP33	NM_052948	exon5	c.C310T	p.R104C	.	.	38	14	57	0	.	229
ARID1A	8289	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	27102066	27102066	+	Splice_Site	SNP	A	A	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ARID1A	NM_139135	exon19	c.4343-2A>T	.	.	.	30	20	45	0	.	584
ARMC3	219681	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	23244758	23244758	+	Silent	SNP	C	C	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ARMC3	NM_173081	exon4	c.C189T	p.L63L	.	.	171	88	213	0	.	90
ARPC1A	10552	hgsc.bcm.edu	37	7	98955969	98955969	+	Silent	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ARPC1A	NM_006409	exon7	c.G720T	p.S240S	.	.	79	4	92	0	.	91
ARSK	153642	broad.mit.edu	37	5	94939215	94939215	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ARSK	NM_198150	exon8	c.T1596A	p.N532K	.	.	240	6	150	1	.	91
ASAP3	55616	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	23759654	23759654	+	Missense_Mutation	SNP	C	C	T	rs199574094		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ASAP3	NM_017707	exon22	c.G2239A	p.E747K	.	.	52	23	74	0	C|0.999;T|0.000	155
ASB15	142685	broad.mit.edu;ucsc.edu;bcgsc.ca	37	7	123269106	123269106	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ASB15	NM_080928	exon8	c.C1058T	p.A353V	.	.	235	70	214	2	.	228
ATAD2B	54454	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	23980759	23980759	+	Missense_Mutation	SNP	T	T	C	rs201429059		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ATAD2B	NM_017552	exon25	c.A3607G	p.M1203V	.	.	162	49	111	0	.	68
ATP2B1	490	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	89998055	89998055	+	Silent	SNP	G	G	A	rs112647159		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ATP2B1	NM_001001323	exon15	c.C2511T	p.S837S	.	.	135	56	187	0	G|0.500;A|0.500	516
ATPAF1	64756	broad.mit.edu	37	1	47123841	47123841	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ATPAF1	NM_001042546	exon4	c.C516A	p.N172K	.	.	522	13	673	9	.	90
ATXN1	6310	broad.mit.edu	37	6	16327921	16327921	+	Missense_Mutation	SNP	C	C	A	rs201030692		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ATXN1	NM_001128164	exon7	c.G621T	p.Q207H	.	.	39	3	27	0	.	93
B3GAT2	135152	broad.mit.edu;bcgsc.ca;mdanderson.org	37	6	71665601	71665601	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	B3GAT2	NM_080742	exon1	c.C532A	p.P178T	.	.	129	38	113	1	.	93
BAHCC1	57597	bcgsc.ca	37	17	79430706	79430706	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	BAHCC1	.	.	.	.	.	.	102	6	86	0	.	23
BCAS3	54828	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	59445783	59445783	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	BCAS3	NM_001099432	exon24	c.G2566A	p.E856K	.	.	81	18	78	0	.	495
BPIFA1	51297	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	20	31828158	31828158	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	.	NM_016583	exon5	c.548delC	p.S183fs	.	.	74	17	79	0	.	.
C12orf52	84934	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	113629261	113629261	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	C12orf52	NM_032848	exon4	c.G449T	p.G150V	.	.	46	16	59	0	.	90
C17orf47	284083	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	56620661	56620661	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	C17orf47	NM_001038704	exon1	c.T887A	p.L296H	.	.	189	55	169	0	.	135
C17orf97	400566	bcgsc.ca	37	17	263687	263687	+	Silent	SNP	C	C	T	rs112578606		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	C17orf97	NM_001013672	exon2	c.C1053T	p.A351A	.	.	108	8	279	3	C|0.500;T|0.500	91
C21orf58	54058	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	21	47722400	47722400	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	C21orf58	NM_058180	exon7	c.A812T	p.Q271L	.	.	81	57	163	0	.	91
CACNA1E	777	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	181701627	181701627	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	CACNA1E	NM_001205293	exon20	c.C2405A	p.A802E	.	.	188	57	170	0	.	95
CACNA2D4	93589	hgsc.bcm.edu	37	12	1994036	1994036	+	Silent	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	CACNA2D4	NM_172364	exon11	c.C1170A	p.A390A	.	.	73	4	96	0	.	23
CACNG8	59283	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	19	54485674	54485674	+	Silent	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	CACNG8	NM_031895	exon4	c.G849T	p.P283P	.	.	26	9	22	0	.	90
CARD11	84433	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	2951897	2951897	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	CARD11	NM_032415	exon23	c.A3053G	p.Q1018R	.	.	108	43	84	0	.	870
CCDC27	148870	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	3686347	3686347	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	CCDC27	NM_152492	exon11	c.C1744A	p.L582I	.	.	74	26	74	0	.	91
CCKBR	887	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	6292577	6292577	+	Missense_Mutation	SNP	C	C	T	rs201876764		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	CCKBR	NM_176875	exon5	c.C1148T	p.A383V	.	.	97	30	94	0	.	574
CDH11	1009	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	65016064	65016064	+	Silent	SNP	G	G	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	CDH11,NS,carcinoma,-1	CDH11	NM_001797	exon8	c.C1140T	p.P380P	.	.	58	43	125	0	.	852
CDH7	1005	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	18	63530135	63530135	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	CDH7	NM_004361	exon11	c.T1846A	p.C616S	.	.	64	28	99	0	.	94
CDHR2	54825	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	5	176016107	176016107	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	CDHR2	NM_017675	exon22	c.2932delG	p.G978fs	.	.	112	23	95	0	.	70
CDKN1C	1028	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	11	2906437	2906437	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	CDKN1C	NM_000076	exon1	c.G283A	p.V95M	.	.	54	17	52	0	.	838
CEP128	145508	broad.mit.edu	37	14	81382846	81382846	+	Silent	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	CEP128	NM_152446	exon2	c.C46A	p.R16R	.	.	125	4	130	0	.	91
CEP170B	283638	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	105349414	105349414	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	.	NM_001112726	exon8	c.G620C	p.G207A	.	.	26	13	55	0	.	.
CFI	3426	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	110685711	110685711	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	CFI	NM_000204	exon3	c.T464G	p.L155R	.	.	65	32	60	0	.	90
CHD7	55636	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	61769252	61769252	+	Silent	SNP	A	A	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	CHD7	NM_017780	exon34	c.A7413G	p.S2471S	.	.	140	70	153	0	.	141
CLCN1	1180	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	143043750	143043750	+	Missense_Mutation	SNP	A	A	T	rs199610988	alternate_allele	TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	CLCN1	NM_000083	exon19	c.A2363T	p.Q788L	.	.	40	10	31	0	A|0.999;C|0.001	156
CNGA4	1262	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	6261357	6261357	+	Silent	SNP	C	C	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	CNGA4	NM_001037329	exon4	c.C333T	p.R111R	.	.	75	23	75	0	.	91
CNTLN	54875	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	17309125	17309125	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	CNTLN	NM_017738	exon8	c.A1216T	p.T406S	.	.	368	153	509	0	.	91
COL26A1	136227	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	101176396	101176396	+	RNA	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	.	.	.	.	.	.	.	44	10	55	0	.	.
COL6A6	131873	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	130285713	130285713	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	COL6A6	NM_001102608	exon4	c.T1450A	p.W484R	.	.	90	36	129	0	.	76
COL9A1	1297	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	70981793	70981793	+	Splice_Site	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	COL9A1	NM_001851	exon14	c.1066-2A>T	.	.	.	388	113	393	0	.	94
CPSF2	53981	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	92609350	92609350	+	Silent	SNP	A	A	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	CPSF2	NM_017437	exon9	c.A852G	p.V284V	.	.	165	65	207	0	.	92
CRADD	8738	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	94243784	94243784	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	CRADD	NM_003805	exon3	c.A337T	p.S113C	.	.	74	31	92	0	.	228
CRNN	49860	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	152382364	152382364	+	Silent	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	CRNN	NM_016190	exon3	c.A1194T	p.T398T	.	.	74	16	78	0	.	93
CST9L	128821	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	23548859	23548859	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	CST9L	NM_080610	exon1	c.T229C	p.W77R	.	.	101	25	82	0	.	90
DCDC2B	149069	broad.mit.edu	37	1	32674726	32674726	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	.	NM_001099434	exon1	c.T32G	p.V11G	.	.	69	9	99	12	.	.
DEAF1	10522	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	679715	679715	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	DEAF1	NM_021008	exon8	c.C1099A	p.Q367K	.	.	29	5	27	0	.	90
DENND4B	9909	bcgsc.ca;mdanderson.org	37	1	153907306	153907306	+	Silent	SNP	T	T	C	rs12567786	bycluster;byfrequency;byhapmap;by1000genomes	TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	DENND4B	NM_014856	exon18	c.A2703G	p.Q901Q	.	.	45	30	46	1	T|0.893;C|0.107	69
DGCR5	26220	broad.mit.edu;ucsc.edu	37	22	18981959	18981959	+	RNA	SNP	C	C	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	.	.	.	.	.	.	.	24	7	37	0	.	.
DIAPH2	1730	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	X	95940062	95940062	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	DIAPH2	NM_007309	exon1	c.A5C	p.E2A	.	.	166	73	217	0	.	133
DLEC1	9940	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	38158025	38158025	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	DLEC1	NM_007337	exon28	c.C3938T	p.P1313L	.	.	81	31	96	0	.	161
DMRTC2	63946	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	19	42353305	42353305	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	DMRTC2	NM_001040283	exon6	c.736delC	p.P246fs	.	.	67	29	63	0	.	90
DNAH6	1768	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	84832704	84832704	+	Silent	SNP	A	A	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	DNAH6	NM_001370	exon20	c.A3162T	p.T1054T	.	.	202	71	191	0	.	69
DNAJC2	27000	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	102953436	102953436	+	Silent	SNP	C	C	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	DNAJC2	NM_014377	exon16	c.G1749A	p.A583A	.	.	154	57	181	0	.	158
DOCK4	9732	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	111575684	111575684	+	Splice_Site	SNP	C	C	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	DOCK4	NM_014705	exon13	c.978-1G>C	.	.	.	207	55	207	0	.	26
DPP10	57628	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	116525912	116525912	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	DPP10	NM_001178034	exon13	c.T1165A	p.F389I	.	.	156	48	182	0	.	142
DUSP27	92235	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	1	167096126	167096126	+	Silent	SNP	G	G	C	rs144793075	alternate_allele	TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	DUSP27	NM_001080426	exon5	c.G1758C	p.L586L	.	.	111	38	92	0	G|1.000;T|0.000	71
EAF1	85403	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	15475936	15475936	+	Silent	SNP	T	T	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	EAF1	NM_033083	exon4	c.T417G	p.P139P	.	.	75	29	97	0	.	90
EFCAB2	84288	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	1	245250660	245250660	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	EFCAB2	NM_032328	exon8	c.T487A	p.X163K	.	.	339	79	221	0	.	90
EGF	1950	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	110897334	110897334	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	EGF	NM_001963	exon13	c.A1996T	p.I666F	.	.	180	108	203	0	.	524
ELMSAN1	91748	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	74191982	74191982	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	.	NM_194278	exon9	c.A2567G	p.Q856R	.	.	51	20	63	0	.	.
EMP3	2014	broad.mit.edu	37	19	48833658	48833658	+	Silent	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	EMP3	NM_001425	exon5	c.G423T	p.L141L	.	.	36	3	48	0	.	514
ERC1	23085	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	1192437	1192437	+	Silent	SNP	A	A	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ERC1	NM_178039	exon3	c.A777C	p.V259V	.	.	70	15	98	0	.	660
ESX1	80712	broad.mit.edu	37	X	103495088	103495088	+	Missense_Mutation	SNP	G	G	C	rs76090537		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ESX1	NM_153448	exon4	c.C1042G	p.L348V	.	.	63	8	55	1	C|1.000;|0.000	131
ESX1	80712	broad.mit.edu	37	X	103495090	103495090	+	Missense_Mutation	SNP	G	G	C	rs200088361		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ESX1	NM_153448	exon4	c.C1040G	p.P347R	.	.	63	7	53	0	.	131
EVC	2121	ucsc.edu;bcgsc.ca;mdanderson.org	37	4	5733299	5733299	+	Missense_Mutation	SNP	G	G	A	rs144897690	byfrequency	TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	EVC	NM_153717	exon4	c.G532A	p.V178I	.	.	243	90	229	1	G|0.997;A|0.003	92
FAM157A	728262	bcgsc.ca	37	3	197880136	197880136	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	.	NM_001145248	exon2	c.A215G	p.Q72R	.	.	289	13	406	2	.	.
FAM157A	728262	bcgsc.ca	37	3	197880139	197880139	+	Missense_Mutation	SNP	A	A	G	rs1820791		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	.	NM_001145248	exon2	c.A218G	p.Q73R	.	.	313	15	418	3	.	.
FAM71B	153745	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	156590005	156590005	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	FAM71B	NM_130899	exon2	c.T1271A	p.V424D	.	.	95	22	82	0	.	96
FAM86C2P	645332	ucsc.edu	37	11	67560494	67560494	+	RNA	SNP	T	T	C	rs61894309		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	.	.	.	.	.	.	.	41	5	32	2	.	.
FANCE	2178	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	35428340	35428340	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	FANCE	NM_021922	exon8	c.A1328G	p.E443G	.	.	109	32	76	0	.	661
FBN1	2200	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	48760297	48760297	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	FBN1	NM_000138	exon38	c.A4585T	p.T1529S	.	.	161	65	221	1	.	92
FBXL4	26235	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	6	99374696	99374696	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	FBXL4	NM_012160	exon3	c.G169T	p.E57X	.	.	86	41	125	0	.	227
FBXO40	51725	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	121341447	121341447	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	FBXO40	NM_016298	exon3	c.C1171G	p.P391A	.	.	115	51	159	0	.	273
FGD5	152273	broad.mit.edu	37	3	14861982	14861982	+	Silent	SNP	T	T	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	FGD5	NM_152536	exon1	c.T1404G	p.G468G	.	.	104	16	170	23	.	231
FKBP4	2288	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	12	2904411	2904411	+	Splice_Site	SNP	G	G	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	FKBP4	NM_002014	exon1	c.105+1G>A	.	.	.	135	53	185	0	.	226
FLT1	2321	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	29008090	29008090	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	FLT1	NM_002019	exon6	c.A679T	p.N227Y	.	.	143	69	213	0	.	1406
FMN2	56776	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	240286488	240286488	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	FMN2	NM_020066	exon2	c.T1625C	p.L542P	.	.	132	35	99	0	.	145
FREM2	341640	broad.mit.edu;ucsc.edu;bcgsc.ca	37	13	39262723	39262723	+	Silent	SNP	A	A	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	FREM2	NM_207361	exon1	c.A1242C	p.V414V	.	.	89	35	119	1	.	100
FRG1B	284802	bcgsc.ca	37	20	29628299	29628299	+	RNA	SNP	A	A	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	FRG1B	.	.	.	.	.	.	692	45	816	29	.	22
FSD2	123722	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	83437679	83437679	+	Silent	SNP	A	A	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	FSD2	NM_001007122	exon9	c.T1506C	p.T502T	.	.	75	34	65	0	.	90
FZD9	8326	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	72849306	72849306	+	Silent	SNP	C	C	T	rs144961735		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	FZD9	NM_003508	exon1	c.C969T	p.F323F	.	.	59	18	54	0	C|1.000;T|0.000	1082
G2E3	55632	broad.mit.edu;ucsc.edu;bcgsc.ca	37	14	31084590	31084590	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	G2E3	NM_017769	exon14	c.A1709G	p.E570G	.	.	157	62	218	1	.	660
GAK	2580	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	4	887684	887684	+	Nonsense_Mutation	SNP	G	G	T	rs140104121	byfrequency;alternate_allele	TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	GAK	NM_005255	exon8	c.C855A	p.Y285X	.	.	123	33	106	0	G|0.999;A|0.001	568
GARNL3	84253	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	130106562	130106562	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	GARNL3	NM_032293	exon15	c.A1300G	p.K434E	.	.	178	79	230	0	.	516
GPR141	353345	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	37780305	37780305	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	GPR141	NM_181791	exon1	c.C310G	p.L104V	.	.	123	36	107	0	.	93
GPR156	165829	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	119886209	119886209	+	Silent	SNP	G	G	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	GPR156	NM_153002	exon9	c.C2115G	p.A705A	.	.	47	16	65	0	.	92
GPR50	9248	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	150349506	150349506	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	GPR50	NM_004224	exon2	c.C1451A	p.A484D	.	.	57	22	81	0	.	176
GPR98	84059	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	89925133	89925133	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	GPR98	NM_032119	exon9	c.T1616C	p.L539S	.	.	304	141	190	0	.	103
GRIK4	2900	broad.mit.edu	37	11	120856647	120856647	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	GRIK4	NM_014619	exon19	c.G2549A	p.R850H	.	.	72	4	90	0	.	92
HAS2	3037	broad.mit.edu;ucsc.edu;bcgsc.ca	37	8	122626466	122626466	+	Silent	SNP	A	A	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	HAS2	NM_005328	exon4	c.T1542A	p.V514V	.	.	115	47	164	2	.	236
HAVCR2	84868	broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	156522415	156522415	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	HAVCR2	NM_032782	exon5	c.G578T	p.R193L	.	.	169	80	119	1	.	90
HEATR4	399671	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	73989702	73989702	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	HEATR4	NM_203309	exon2	c.G155T	p.S52I	.	.	86	36	125	0	.	91
HERC2P3	283755	ucsc.edu;bcgsc.ca	37	15	20645799	20645799	+	RNA	SNP	C	C	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	HERC2P3	.	.	.	.	.	.	46	4	65	0	.	92
HERC6	55008	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	89329771	89329771	+	Splice_Site	SNP	T	T	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	HERC6	NM_017912	exon11	c.1368+2T>C	.	.	.	158	107	402	0	.	658
HHAT	55733	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	210591627	210591627	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	HHAT	NM_001170587	exon6	c.A817T	p.S273C	.	.	186	47	173	0	.	92
HIP1	3092	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	75176292	75176292	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	HIP1	NM_005338	exon25	c.A2504T	p.Q835L	.	.	85	20	81	0	.	1085
HIST1H2BE	8344	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	26184113	26184113	+	Silent	SNP	C	C	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	HIST1H2BE	NM_003523	exon1	c.C90G	p.R30R	.	.	160	42	148	0	.	90
HMGB2	3148	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	174253236	174253236	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	HMGB2	NM_001130689	exon4	c.G625A	p.E209K	.	.	138	28	130	0	.	650
HPSE2	60495	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	10	100992230	100992230	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	HPSE2	NM_001166246	exon2	c.T323A	p.L108H	.	.	227	195	308	0	.	91
HTRA2	27429	broad.mit.edu	37	2	74757339	74757339	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	HTRA2	NM_013247	exon1	c.G206T	p.R69L	.	.	195	4	175	1	.	91
IL10RA	3587	broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	117860245	117860245	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	IL10RA	NM_001558	exon3	c.A277T	p.S93C	.	.	130	39	98	1	.	91
IWS1	55677	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	128249666	128249666	+	Splice_Site	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	IWS1	NM_017969	exon11	c.1930-2A>T	.	.	.	127	38	113	0	.	91
JMJD7-PLA2G4B	8681	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	42139617	42139617	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	JMJD7-PLA2G4B	NM_005090	exon24	c.A2723G	p.Q908R	.	.	42	16	60	0	.	135
KAT2B	8850	hgsc.bcm.edu;ucsc.edu;bcgsc.ca	37	3	20156482	20156482	+	Splice_Site	SNP	T	T	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	KAT2B	NM_003884	exon7	c.1150+2T>G	.	.	.	83	30	143	0	.	228
KCNK3	3777	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	2	26915803	26915803	+	Silent	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	KCNK3	NM_002246	exon1	c.G60T	p.L20L	.	.	69	20	53	0	.	91
KCNT1	57582	broad.mit.edu	37	9	138657493	138657493	+	Silent	SNP	C	C	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	KCNT1	NM_020822	exon13	c.C1224T	p.C408C	.	.	106	4	158	0	.	137
KIAA0226L	80183	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	46946076	46946076	+	Missense_Mutation	SNP	C	C	T	rs140036142	alternate_allele	TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	.	NM_025113	exon3	c.G535A	p.G179S	.	.	55	22	76	1	C|0.995;G|0.005	.
KIAA1191	57179	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	175774922	175774922	+	Splice_Site	SNP	A	A	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	KIAA1191	NM_001079685	exon8	c.709+2T>G	.	.	.	161	44	109	0	.	91
KIF4B	285643	broad.mit.edu	37	5	154395441	154395441	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	KIF4B	NM_001099293	exon1	c.G2022T	p.Q674H	.	.	625	6	498	1	.	1
KIF5A	3798	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	57963063	57963063	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	KIF5A	NM_004984	exon10	c.A844T	p.S282C	.	.	82	35	104	0	.	517
KIF6	221458	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	39311593	39311593	+	Splice_Site	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	KIF6	NM_145027	exon23	c.2322-2A>T	.	.	.	76	28	90	0	.	713
KLHL17	339451	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	898282	898282	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	KLHL17	NM_198317	exon6	c.G1027A	p.V343M	.	.	27	12	30	0	.	90
KLHL32	114792	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	97512550	97512550	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	KLHL32	NM_052904	exon5	c.G359T	p.S120I	.	.	92	33	94	0	.	94
KRT7	3855	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	52635357	52635357	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	KRT7	NM_005556	exon5	c.G795T	p.K265N	.	.	57	22	85	0	.	90
KRT80	144501	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	52579367	52579367	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	KRT80	NM_182507	exon2	c.A305T	p.Q102L	.	.	14	6	16	0	.	226
LCT	3938	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	136567010	136567010	+	Silent	SNP	C	C	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	LCT	NM_002299	exon8	c.G2907A	p.L969L	.	.	81	18	108	0	.	101
LENEP	55891	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	154966209	154966209	+	Silent	SNP	C	C	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	LENEP	NM_018655	exon1	c.C126A	p.T42T	.	.	61	18	60	0	.	68
LEPRE1	64175	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	43218272	43218272	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	LEPRE1	NM_001146289	exon9	c.A1409T	p.Q470L	.	.	108	25	94	0	.	94
LINC00176	284739	hgsc.bcm.edu	37	20	62670294	62670307	+	RNA	DEL	GAGGCCCGCCCTCC	GAGGCCCGCCCTCC	-	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	GAGGCCCGCCCTCC	GAGGCCCGCCCTCC	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	.	.	.	.	.	.	.	59	34	65	0	.	.
LOC100128164	0	broad.mit.edu	37	3	169684454	169684454	+	RNA	SNP	C	C	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	.	.	.	.	.	.	.	61	24	67	0	.	.
LRRC4C	57689	broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	40137430	40137430	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	LRRC4C	NM_001258419	exon7	c.C413A	p.T138N	.	.	177	44	153	1	.	521
LRRCC1	85444	broad.mit.edu	37	8	86019547	86019547	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	LRRCC1	NM_033402	exon1	c.C17T	p.A6V	.	.	139	5	150	1	.	90
MAD1L1	8379	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	2252879	2252879	+	Silent	SNP	C	C	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	MAD1L1	NM_003550	exon10	c.G954A	p.E318E	.	.	49	19	46	0	.	1083
MAGEC2	51438	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	141291161	141291161	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	MAGEC2	NM_016249	exon3	c.T613A	p.F205I	.	.	137	60	171	0	.	193
MAPK7	5598	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	19284705	19284705	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	MAPK7	NM_002749	exon4	c.A1183T	p.I395F	.	.	44	17	95	0	.	1402
MC4R	4160	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	18	58039130	58039130	+	Silent	SNP	G	G	A	rs142925940		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	MC4R	NM_005912	exon1	c.C453T	p.I151I	.	.	63	20	99	0	G|1.000;A|0.000	522
MDGA1	266727	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	37611713	37611713	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	MDGA1	NM_153487	exon14	c.A2408G	p.Y803C	.	.	76	20	63	0	.	91
MDN1	23195	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	90388402	90388402	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	MDN1	NM_014611	exon75	c.G12328A	p.E4110K	.	.	107	35	121	0	.	100
MED23	9439	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	131910712	131910712	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	MED23	NM_015979	exon29	c.C3850A	p.L1284M	.	.	142	51	221	0	.	24
MERTK	10461	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	112732991	112732991	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	MERTK	NM_006343	exon7	c.G1086T	p.M362I	.	.	141	56	150	0	.	1463
MEX3D	399664	hgsc.bcm.edu	37	19	1555880	1555880	+	Silent	SNP	C	C	T	rs75438199		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	MEX3D	NM_203304	exon2	c.G1638A	p.P546P	.	.	8	7	2	0	C|0.962;T|0.038	658
MFAP2	4237	hgsc.bcm.edu;broad.mit.edu	37	1	17303663	17303663	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	MFAP2	NM_002403	exon3	c.T68C	p.L23P	.	.	76	4	91	0	.	514
MLL3	58508	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	151873528	151873528	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	MLL3	NM_170606	exon38	c.C9010G	p.L3004V	.	.	154	44	110	0	.	1398
MLLT6	4302	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	36868254	36868254	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	MLLT6	NM_005937	exon7	c.G707C	p.R236T	.	.	121	55	181	0	.	659
MRPL46	26589	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	15	89008827	89008827	+	Missense_Mutation	SNP	G	G	C	rs146169028	alternate_allele	TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	MRPL46	NM_022163	exon2	c.C406G	p.R136G	.	.	57	22	64	0	G|1.000;A|0.000	90
MUC16	94025	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	9074549	9074549	+	Silent	SNP	A	A	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	MUC16	NM_024690	exon3	c.T12897A	p.I4299I	.	.	29	23	100	1	.	566
MYO10	4651	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	16682120	16682120	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	MYO10	NM_012334	exon31	c.C4049T	p.P1350L	.	.	37	8	27	0	.	3
MYO7A	4647	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	76858873	76858873	+	Silent	SNP	G	G	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	MYO7A	NM_001127179	exon4	c.G162A	p.T54T	.	.	82	48	91	0	.	138
MYT1	4661	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	62837052	62837052	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	MYT1	NM_004535	exon6	c.T296A	p.V99E	.	.	103	30	106	1	.	704
NACAD	23148	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	45120738	45120738	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	.	NM_001146334	exon5	c.A4382T	p.Y1461F	.	.	107	30	100	0	.	.
NBEAP1	606	broad.mit.edu;bcgsc.ca	37	15	20874843	20874843	+	RNA	SNP	C	C	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	.	.	.	.	.	.	.	183	45	265	0	.	.
NCKAP1	10787	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	183866687	183866687	+	Silent	SNP	A	A	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	NCKAP1	NM_205842	exon7	c.T615C	p.H205H	.	.	283	77	252	0	.	92
NCLN	56926	broad.mit.edu	37	19	3196190	3196190	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	NCLN	NM_020170	exon4	c.G530T	p.R177L	.	.	79	3	89	0	.	90
NCOR2	9612	broad.mit.edu;mdanderson.org	37	12	124887093	124887093	+	Silent	SNP	C	C	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	NCOR2	NM_006312	exon16	c.G1497A	p.Q499Q	.	.	15	3	12	0	.	229
NEB	4703	broad.mit.edu	37	2	152419186	152419186	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	NEB	NM_001271208	exon120	c.C18830A	p.T6277K	.	.	158	3	139	0	.	145
NELFB	25920	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	9	140160781	140160781	+	Splice_Site	SNP	A	A	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	.	NM_015456	exon8	c.1000-2A>G	.	.	.	94	36	128	0	.	.
NOBOX	135935	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	144096937	144096937	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	NOBOX	NM_001080413	exon6	c.G1067T	p.R356L	.	.	82	25	90	0	.	69
NOS1	4842	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	12	117655927	117655927	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	NOS1	NM_001204218	exon29	c.C4315T	p.R1439X	.	.	144	43	179	0	.	154
NOX4	50507	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	89182674	89182674	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	NOX4	NM_001143836	exon4	c.A283T	p.R95W	.	.	318	107	242	0	.	515
NPSR1	387129	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	34917718	34917718	+	Silent	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	NPSR1	NM_207173	exon9	c.T1056A	p.A352A	.	.	251	70	232	0	.	94
NPTX1	4884	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	17	78450179	78450179	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	NPTX1	NM_002522	exon1	c.A68T	p.Q23L	.	.	40	13	32	0	.	90
NUP188	23511	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	131763862	131763862	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	NUP188	NM_015354	exon35	c.G3898A	p.G1300S	.	.	30	14	34	0	.	207
NUP98	4928	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	3721964	3721964	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	NUP98	NM_016320	exon24	c.A3618T	p.L1206F	.	.	139	34	120	0	.	703
OGFR	11054	bcgsc.ca	37	20	61444569	61444569	+	Silent	SNP	A	A	G	rs3204348	byfrequency;by1000genomes	TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	OGFR	NM_007346	exon7	c.A1602G	p.P534P	.	.	100	14	67	3	A|0.979;G|0.021	68
OR2H1	26716	broad.mit.edu	37	6	29430436	29430436	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	OR2H1	NM_030883	exon3	c.G890T	p.R297L	.	.	156	4	152	1	.	90
OR51D1	390038	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	4661505	4661505	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	OR51D1	NM_001004751	exon1	c.T485A	p.L162Q	.	.	69	24	66	0	.	68
OR51F1	256892	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	4790465	4790465	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	OR51F1	NM_001004752	exon1	c.T683G	p.L228R	.	.	185	56	167	0	.	70
OR5B12	390191	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	58207528	58207528	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	OR5B12	NM_001004733	exon1	c.T97A	p.Y33N	.	.	155	40	160	0	.	68
OR5H1	26341	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	3	97851772	97851772	+	Silent	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	OR5H1	NM_001005338	exon1	c.G231T	p.V77V	.	.	701	250	963	1	.	136
OR6C74	254783	bcgsc.ca	37	12	55640984	55640984	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	OR6C74	.	.	.	.	.	.	24	10	25	0	.	68
OR6M1	390261	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	123676307	123676307	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	OR6M1	NM_001005325	exon1	c.A751T	p.S251C	.	.	103	34	84	0	.	70
OR8S1	341568	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	48919696	48919696	+	Silent	SNP	A	A	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	OR8S1	NM_001005203	exon1	c.A282G	p.V94V	.	.	69	29	98	0	.	69
PABPC4L	132430	broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	135121211	135121211	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	.	NM_001114734	exon2	c.G1138T	p.V380F	.	.	249	66	241	1	.	.
PARP9	83666	broad.mit.edu	37	3	122274486	122274486	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	PARP9	NM_031458	exon4	c.C637A	p.L213M	.	.	101	3	141	0	.	525
PCDH7	5099	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	30723268	30723268	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	PCDH7	NM_032457	exon1	c.T224A	p.L75Q	.	.	61	15	59	0	.	229
PCDHGA8	9708	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	140773878	140773878	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	.	NM_014004	exon1	c.C1498T	p.P500S	.	.	184	88	128	0	.	.
PCDHGB2	56103	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	140740665	140740665	+	Silent	SNP	A	A	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	PCDHGB2	NM_018923	exon1	c.A963C	p.A321A	.	.	183	39	131	0	.	33
PDE11A	50940	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	178494226	178494226	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	PDE11A	NM_016953	exon20	c.A2711T	p.K904M	.	.	243	76	220	0	.	93
PDZRN3	23024	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	3	73673351	73673351	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	PDZRN3	NM_015009	exon1	c.T626G	p.L209R	.	.	15	7	24	0	.	232
PDZRN3	23024	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	73432795	73432795	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	PDZRN3	NM_015009	exon10	c.C2922A	p.S974R	.	.	44	16	70	0	.	232
PEX2	5828	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	8	77895734	77895734	+	Silent	SNP	A	A	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	PEX2	NM_000318	exon4	c.T681A	p.L227L	.	.	65	23	78	0	.	91
PEX2	5828	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	8	77895736	77895736	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	PEX2	NM_000318	exon4	c.C679T	p.L227F	.	.	64	22	75	0	.	91
PEX2	5828	hgsc.bcm.edu;ucsc.edu;bcgsc.ca	37	8	77895737	77895737	+	Silent	SNP	A	A	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	PEX2	NM_000318	exon4	c.T678A	p.P226P	.	.	65	23	75	0	.	91
PFKFB1	5207	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	54982655	54982655	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	PFKFB1	NM_002625	exon7	c.T569G	p.L190R	.	.	78	9	120	0	.	131
PFKFB3	5209	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	6257273	6257273	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	PFKFB3	NM_004566	exon3	c.G292T	p.V98F	.	.	40	5	50	0	.	117
PGR	5241	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	11	100999049	100999049	+	Silent	SNP	T	T	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	PGR	NM_000926	exon1	c.A753G	p.G251G	.	.	31	7	41	0	.	652
PHIP	55023	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	79688417	79688417	+	Silent	SNP	C	C	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	PHIP	NM_017934	exon24	c.G2781C	p.V927V	.	.	97	47	159	0	.	579
PIP5K1C	23396	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	3648626	3648626	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	PIP5K1C	NM_001195733	exon9	c.A1208T	p.Y403F	.	.	104	48	176	1	.	267
PKD1L1	168507	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	47886593	47886593	+	Silent	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	PKD1L1	NM_138295	exon32	c.A5037T	p.A1679A	.	.	327	114	313	0	.	145
PKHD1	5314	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	51923279	51923279	+	Missense_Mutation	SNP	A	A	T	rs201989004	alternate_allele	TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	PKHD1	NM_170724	exon16	c.T1354A	p.Y452N	.	.	107	37	52	0	A|0.999;G|0.000	603
PKHD1L1	93035	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	110471959	110471959	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	PKHD1L1	NM_177531	exon47	c.A7140C	p.E2380D	.	.	208	83	278	0	.	145
PLA2G4E	123745	hgsc.bcm.edu;bcgsc.ca;mdanderson.org	37	15	42342807	42342807	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	.	NM_001206670	exon1	c.G95C	p.G32A	.	.	91	44	113	0	.	.
PLD5	200150	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	242264076	242264076	+	Silent	SNP	A	A	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	PLD5	NM_152666	exon10	c.T1248C	p.F416F	.	.	127	29	91	0	.	96
PLEKHM1	9842	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	17	43545720	43545720	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	PLEKHM1	NM_014798	exon5	c.A1163G	p.Q388R	.	.	118	39	174	0	.	90
PPP1R13B	23368	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	104206739	104206739	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	PPP1R13B	NM_015316	exon12	c.C2014T	p.P672S	.	.	32	16	42	0	.	227
PPP1R3G	648791	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	6	5086148	5086148	+	Silent	SNP	C	C	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	PPP1R3G	NM_001145115	exon1	c.C429A	p.A143A	.	.	21	9	23	0	.	136
PRDM1	639	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	106553643	106553643	+	Silent	SNP	A	A	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	PRDM1	NM_001198	exon5	c.A1608T	p.A536A	.	.	122	48	161	0	.	862
PRDX4	10549	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	23693213	23693213	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	PRDX4	NM_006406	exon3	c.C466G	p.H156D	.	.	577	228	695	0	.	131
PSKH2	85481	broad.mit.edu;ucsc.edu;bcgsc.ca	37	8	87076277	87076277	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	PSKH2	NM_033126	exon2	c.A769T	p.S257C	.	.	88	36	119	2	.	385
PTCHD4	442213	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	6	47846685	47846685	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	.	NM_001013732	exon3	c.T1895A	p.L632Q	.	.	53	13	50	0	.	.
PTGIR	5739	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	47124692	47124692	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	PTGIR	NM_000960	exon3	c.C1006T	p.P336S	.	.	104	49	146	0	.	522
PTPRT	11122	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	40944529	40944529	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	PTPRT	NM_007050	exon12	c.T1973A	p.L658H	.	.	180	63	172	0	.	664
PVRL1	5818	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	119508959	119508959	+	Splice_Site	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	PVRL1	NM_203285	exon9	c.1228-2A>T	.	.	.	50	9	35	0	.	90
RAP1A	5906	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	112247100	112247100	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	RAP1A	NM_001010935	exon7	c.G460A	p.V154I	.	.	150	55	99	0	.	847
REV3L	5980	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	6	111693804	111693804	+	Silent	SNP	C	C	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	REV3L	NM_002912	exon13	c.G5754A	p.K1918K	.	.	72	34	95	0	.	294
REV3L	5980	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	6	111688372	111688372	+	Nonsense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	REV3L	NM_002912	exon14	c.A6619T	p.R2207X	.	.	82	37	136	0	.	294
RFT1	91869	broad.mit.edu	37	3	53125923	53125923	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	RFT1	NM_052859	exon13	c.C1622A	p.T541K	.	.	90	3	149	0	.	91
RNF212	285498	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	1084625	1084625	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	RNF212	NM_194439	exon4	c.T248A	p.I83N	.	.	91	24	84	0	.	68
RNF6	6049	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	26789149	26789149	+	Silent	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	RNF6,arm,malignant_melanoma,-2	RNF6	NM_183043	exon5	c.A870T	p.T290T	.	.	105	38	127	0	.	228
ROCK2	9475	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	11337476	11337476	+	Splice_Site	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ROCK2	NM_004850	exon28	c.3280-2A>T	.	.	.	219	61	215	0	.	546
ROS1	6098	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	117686251	117686251	+	Silent	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ROS1	NM_002944	exon20	c.A3090T	p.T1030T	.	.	97	42	144	0	.	1353
RP1	6101	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	55533794	55533794	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	RP1	NM_006269	exon2	c.C268G	p.H90D	.	.	58	32	104	0	.	102
RPS6KA2	6196	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	166862319	166862319	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	RPS6KA2	NM_001006932	exon15	c.A1249T	p.I417F	.	.	49	25	78	0	.	1405
SAMD9L	219285	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	92763732	92763732	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	SAMD9L	NM_152703	exon5	c.A1553C	p.Q518P	.	.	207	73	189	1	.	94
SCAF8	22828	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	155145419	155145419	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	SCAF8	NM_014892	exon17	c.C1978A	p.P660T	.	.	80	10	85	0	.	91
SCAP	22937	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	47461017	47461017	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	SCAP	NM_012235	exon13	c.C1741A	p.P581T	.	.	97	35	128	0	.	91
SCNN1G	6340	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	23197855	23197855	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	SCNN1G	NM_001039	exon2	c.A263T	p.H88L	.	.	28	14	49	0	.	158
SDHAP2	727956	broad.mit.edu	37	3	195404627	195404627	+	RNA	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	.	.	.	.	.	.	.	497	4	594	2	.	.
SEMA3A	10371	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	83675692	83675692	+	Silent	SNP	A	A	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	SEMA3A	NM_006080	exon6	c.T615G	p.L205L	.	.	219	66	157	0	.	156
SEMA6A	57556	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	115783094	115783094	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	SEMA6A	NM_020796	exon19	c.C2308T	p.P770S	.	.	82	44	73	0	.	92
SERTAD3	29946	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	40947776	40947776	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	SERTAD3	NM_013368	exon2	c.T212A	p.L71Q	.	.	38	13	52	0	.	90
SESN3	143686	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	94906456	94906456	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	SESN3	NM_144665	exon10	c.T1442C	p.L481P	.	.	151	37	132	0	.	90
SFTPA2	729238	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	81317058	81317058	+	Silent	SNP	A	A	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	.	NM_001098668	exon6	c.T654G	p.G218G	.	.	322	261	455	1	.	.
SIAH1	6477	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	48395984	48395984	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	SIAH1	NM_001006610	exon2	c.A449C	p.E150A	.	.	88	37	136	0	.	415
SIPA1L2	57568	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	232539296	232539296	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	SIPA1L2	NM_020808	exon19	c.G4838T	p.C1613F	.	.	97	37	63	0	.	95
SLC17A3	10786	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	25850686	25850686	+	Splice_Site	SNP	C	C	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	SLC17A3	NM_006632	exon8	c.759+1G>A	.	.	.	157	41	160	0	.	91
SLC1A6	6511	broad.mit.edu;ucsc.edu;mdanderson.org	37	19	15063777	15063777	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	SLC1A6	NM_005071	exon8	c.G1462T	p.E488X	.	.	148	41	199	1	.	186
SLC25A24	29957	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	108686249	108686249	+	Silent	SNP	T	T	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	SLC25A24	NM_013386	exon8	c.A1014G	p.E338E	.	.	142	27	118	1	.	91
SLC29A4	222962	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	7	5336621	5336621	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	SLC29A4	NM_153247	exon7	c.C674G	p.P225R	.	.	46	10	34	0	.	515
SLC7A8	23428	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	23635745	23635745	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	SLC7A8	NM_012244	exon2	c.C156G	p.N52K	.	.	26	11	45	0	.	91
SMG1	23049	broad.mit.edu;bcgsc.ca;mdanderson.org	37	16	18887703	18887703	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	SMG1	NM_015092	exon13	c.G1633T	p.A545S	.	.	201	90	270	0	.	1160
SPIN2B	474343	broad.mit.edu	37	X	57146615	57146615	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	SPIN2B	NM_001006683	exon2	c.A448G	p.M150V	.	.	581	7	828	1	.	90
SPTBN5	51332	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	15	42185565	42185565	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	SPTBN5	NM_016642	exon2	c.A26G	p.H9R	.	.	48	24	60	0	.	91
ST18	9705	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	53050033	53050033	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ST18	NM_014682	exon18	c.C2179A	p.P727T	.	.	114	39	127	0	.	95
STAC2	342667	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	37371219	37371219	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	STAC2	NM_198993	exon6	c.G757T	p.G253W	.	.	63	20	79	0	.	91
STAR	6770	broad.mit.edu	37	8	38005778	38005778	+	Silent	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	STAR	NM_000349	exon3	c.C246A	p.A82A	.	.	65	3	91	0	.	91
SV2A	9900	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	149879627	149879627	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	SV2A	NM_014849	exon9	c.A1511T	p.Q504L	.	.	194	51	163	0	.	97
SYS1	90196	ucsc.edu	37	20	43995834	43995834	+	RNA	SNP	A	A	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	SYS1	.	.	.	.	.	.	39	18	46	0	.	23
TBC1D28	254272	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	18541690	18541690	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	TBC1D28	NM_001039397	exon8	c.G323A	p.G108D	.	.	133	54	164	0	.	91
TCN2	6948	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	31006953	31006953	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	TCN2	NM_001184726	exon2	c.A160G	p.I54V	.	.	76	29	112	0	.	90
TGFBRAP1	9392	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	105890085	105890085	+	Silent	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	TGFBRAP1	NM_004257	exon9	c.A1728T	p.P576P	.	.	157	49	149	0	.	91
TGS1	96764	broad.mit.edu	37	8	56711573	56711573	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	TGS1	NM_024831	exon8	c.A1643G	p.D548G	.	.	101	3	161	0	.	227
THBS2	7058	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	169639734	169639734	+	Silent	SNP	T	T	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	THBS2	NM_003247	exon8	c.A1089G	p.P363P	.	.	41	17	58	0	.	95
TLL1	7092	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	4	166996136	166996136	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	TLL1	NM_012464	exon17	c.T2295A	p.N765K	.	.	185	17	171	0	.	158
TMCC3	57458	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	94972248	94972248	+	Silent	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	TMCC3	NM_020698	exon3	c.A1053T	p.T351T	.	.	52	31	88	0	.	92
TMEM194B	100131211	hgsc.bcm.edu	37	2	191399378	191399378	+	Missense_Mutation	SNP	C	C	G	rs13412879		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	.	NM_001142645	exon1	c.G4C	p.G2R	.	.	10	8	2	0	C|0.836;G|0.164	.
TOP3A	7156	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	18193874	18193874	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	TOP3A	NM_004618	exon13	c.A1594T	p.I532F	.	.	28	11	51	0	.	228
TPP2	7174	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	103288606	103288606	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	TPP2	NM_003291	exon13	c.T1542A	p.N514K	.	.	167	61	204	0	.	92
TRERF1	55809	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	42200563	42200563	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	TRERF1	NM_033502	exon17	c.A3134G	p.K1045R	.	.	56	12	36	0	.	230
TRIM4	89122	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	99506413	99506413	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	TRIM4	NM_033017	exon4	c.T590C	p.M197T	.	.	99	30	88	0	.	227
TRIM52	84851	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	180684462	180684462	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	TRIM52	NM_032765	exon2	c.C847A	p.L283I	.	.	223	42	143	0	.	90
TSEN54	283989	hgsc.bcm.edu	37	17	73512653	73512653	+	Missense_Mutation	SNP	G	G	T	rs7216673		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	TSEN54	NM_207346	exon1	c.G12T	p.E4D	.	.	6	6	0	0	G|0.464;T|0.536	91
TSHZ3	57616	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	19	31768760	31768760	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	TSHZ3	NM_020856	exon2	c.A1939C	p.S647R	.	.	48	21	74	0	.	232
TSTA3	7264	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	144698802	144698802	+	Silent	SNP	T	T	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	TSTA3	NM_003313	exon2	c.A81C	p.V27V	.	.	95	43	83	0	.	91
TTN	7273	broad.mit.edu	37	2	179393637	179393637	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	TTN	NM_001267550	exon360	c.C106841A	p.T35614N	.	.	172	3	181	0	.	636
TTN	7273	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	2	179641996	179641996	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	TTN	NM_001267550	exon27	c.T4694C	p.V1565A	.	.	99	22	76	0	.	636
TUBB1	81027	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	57599165	57599165	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	TUBB1	NM_030773	exon4	c.T683A	p.L228Q	.	.	101	27	85	0	.	227
TUBGCP6	85378	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	50682173	50682173	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	TUBGCP6	NM_020461	exon1	c.C716T	p.A239V	.	.	32	4	51	0	.	93
UBC	7316	broad.mit.edu	37	12	125397196	125397196	+	Silent	SNP	C	C	T	rs1136634		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	UBC	NM_021009	exon2	c.G1122A	p.V374V	.	.	137	5	167	0	C|1.000;|0.000	46
UBQLN1	29979	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	86284174	86284174	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	UBQLN1	NM_053067	exon7	c.C1174A	p.Q392K	.	.	87	32	117	0	.	90
UNC5C	8633	broad.mit.edu	37	4	96256643	96256643	+	Silent	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	UNC5C	NM_003728	exon2	c.C264A	p.A88A	.	.	122	4	277	0	.	94
UNC80	285175	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	210818961	210818961	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	UNC80	NM_032504	exon47	c.A7226G	p.Q2409R	.	.	119	31	108	0	.	90
USP10	9100	broad.mit.edu	37	16	84779219	84779219	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	USP10	NM_001272075	exon5	c.G1144A	p.V382I	.	.	95	6	185	1	.	636
USP53	54532	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	120189490	120189490	+	Silent	SNP	G	G	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	USP53	NM_019050	exon13	c.G1203A	p.K401K	.	.	663	193	682	0	.	660
VWA3B	200403	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	98779401	98779401	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	VWA3B	NM_144992	exon8	c.C1076T	p.A359V	.	.	65	21	49	0	.	139
WDR81	124997	bcgsc.ca	37	17	1631749	1631751	+	In_Frame_Del	DEL	GAG	GAG	-	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	GAG	GAG	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	WDR81	NM_001163809	exon1	c.3496_3498del	p.1166_1166del	.	.	47	5	102	0	.	91
WFDC3	140686	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	44417609	44417609	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	WFDC3	NM_080614	exon3	c.A172C	p.T58P	.	.	92	24	78	1	.	90
ZDBF2	57683	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	207176232	207176232	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ZDBF2	NM_020923	exon5	c.A6980T	p.D2327V	.	.	289	74	309	0	.	3
ZFP42	132625	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	4	188924650	188924650	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ZFP42	NM_174900	exon4	c.C689A	p.S230X	.	.	68	39	50	0	.	228
ZFP91	80829	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	58347078	58347078	+	Silent	SNP	G	G	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ZFP91	NM_001197051	exon1	c.G324A	p.K108K	.	.	47	12	41	0	.	91
ZFR2	23217	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	3820200	3820200	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ZFR2	NM_015174	exon11	c.C1720A	p.P574T	.	.	52	20	84	0	.	70
ZFYVE20	64145	broad.mit.edu;bcgsc.ca	37	3	15137554	15137554	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ZFYVE20	NM_022340	exon4	c.C74A	p.S25Y	.	.	68	6	95	0	.	92
ZMYM4	9202	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	35884069	35884069	+	Silent	SNP	A	A	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ZMYM4	NM_005095	exon29	c.A4335G	p.K1445K	.	.	84	28	111	0	.	291
ZNF101	94039	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	19790802	19790802	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ZNF101	NM_033204	exon4	c.A1004G	p.E335G	.	.	79	33	96	0	.	92
ZNF174	7727	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	3458764	3458764	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ZNF174	NM_003450	exon3	c.G1069A	p.G357R	.	.	77	33	134	0	.	90
ZNF180	7733	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	44981527	44981527	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ZNF180	NM_013256	exon5	c.A1171C	p.S391R	.	.	82	37	93	0	.	92
ZNF233	353355	hgsc.bcm.edu	37	19	44778799	44778799	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ZNF233	NM_001207005	exon5	c.1986delG	p.L662fs	.	.	39	21	76	0	.	92
ZNF609	23060	broad.mit.edu;ucsc.edu;bcgsc.ca	37	15	64967591	64967591	+	Silent	SNP	T	T	G	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ZNF609	NM_015042	exon4	c.T2538G	p.S846S	.	.	34	14	52	1	.	92
ZNF773	374928	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	58018610	58018610	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ZNF773	NM_198542	exon4	c.G1147C	p.G383R	.	.	128	55	222	0	.	91
ZNF793	390927	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	38024278	38024278	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ZNF793	NM_001013659	exon7	c.G211A	p.A71T	.	.	128	60	135	0	.	68
ZXDC	79364	hgsc.bcm.edu	37	3	126194357	126194357	+	Missense_Mutation	SNP	G	G	C	rs7624748		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	ZXDC	NM_025112	exon1	c.C352G	p.P118A	.	.	7	7	0	0	G|0.098;C|0.902	91
ZNF536	9745	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	31038966	31038967	+	Missense_Mutation	DNP	GG	GG	TT	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	GG	GG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	.	.	.	.	p.G814L	.	.	.	.	.	.	.	
KAT2B	8850	hgsc.bcm.edu;ucsc.edu;bcgsc.ca	37	3	20156480	20156481	+	Splice_Site	DNP	GG	GG	TT	novel		TCGA-LG-A6GG-01A-11D-A30V-10	TCGA-LG-A6GG-10A-01D-A30V-10	GG	GG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	85af03fa-9e34-4b29-8897-d39a1b1773e2	b9ec4d89-18c3-4d18-b0cc-43cb9a086ec5	.	.	.	.	.	.	.	.	.	.	.	.	.	
