Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	TranscriptID	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov_SOL	TVarCov_SOL	NTotCov_SOL	NVarCov_SOL	dbSNPPopFreq	COSMIC_Gene_Freq
A1BG	1	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	19	58861838	58861840	+	In_Frame_Del	DEL	TGT	TGT	-	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	TGT	TGT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	A1BG	NM_130786	exon6	c.1088_1090del	p.363_364del	.	.	196	0	74	0	.	90
ABCC3	8714	broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	48734480	48734480	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ABCC3	NM_003786	exon4	c.G422T	p.W141L	.	.	107	13	56	1	.	93
ABCC3	8714	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	48734481	48734481	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ABCC3	NM_003786	exon4	c.G423T	p.W141C	.	.	107	13	56	0	.	93
ADAM19	8728	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	156934075	156934075	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ADAM19	NM_033274	exon10	c.G979A	p.G327R	.	.	139	32	100	0	.	294
ADAMTS18	170692	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	16	77323232	77323232	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ADAMTS18	NM_199355	exon22	c.G3479A	p.C1160Y	.	.	56	19	38	0	.	1036
ADARB1	104	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	21	46604970	46604970	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ADARB1	NM_015834	exon9	c.G1649A	p.R550Q	.	.	60	20	42	0	.	91
ADCY2	108	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	7707833	7707833	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ADCY2	NM_020546	exon9	c.C1283A	p.S428Y	.	.	94	28	56	0	.	97
ADGB	79747	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	147049794	147049794	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_024694	exon20	c.C2437A	p.L813I	.	.	60	16	61	0	.	.
ADGB	79747	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	147103205	147103205	+	Silent	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_024694	exon30	c.C3912T	p.S1304S	.	.	71	9	60	0	.	.
AGGF1	55109	hgsc.bcm.edu	37	5	76332463	76332463	+	Missense_Mutation	SNP	C	C	A	rs78273685		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	AGGF1	NM_018046	exon4	c.C599A	p.A200E	.	.	158	7	92	0	A|0.001;C|0.999	117
AGGF1	55109	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	76342325	76342325	+	Missense_Mutation	SNP	A	A	G	rs149788789	byfrequency	TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	AGGF1	NM_018046	exon6	c.A1024G	p.I342V	.	.	232	60	149	0	A|0.999;G|0.001	117
AHNAK2	113146	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	14	105417167	105417167	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	AHNAK2	NM_138420	exon7	c.C4621A	p.L1541M	.	.	151	13	145	0	.	47
ALB	213	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	74285252	74285252	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ALB	NM_000477	exon13	c.C1681T	p.P561S	.	.	30	15	30	0	.	96
ALS2CL	259173	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	46730917	46730917	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ALS2CL	NM_001190707	exon2	c.A14T	p.E5V	.	.	119	15	66	0	.	155
ANP32D	23519	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	48866816	48866816	+	Silent	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ANP32D	NM_012404	exon1	c.C369T	p.C123C	.	.	81	28	77	0	.	227
ARAP1	116985	broad.mit.edu;mdanderson.org	37	11	72414044	72414044	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ARAP1	NM_001040118	exon15	c.C2073A	p.F691L	.	.	26	4	25	0	.	91
ARHGAP15	55843	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	144194492	144194492	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ARHGAP15	NM_018460	exon8	c.C584T	p.S195L	.	.	133	50	90	0	.	653
ARHGEF5	7984	broad.mit.edu	37	7	144060770	144060770	+	Silent	SNP	T	T	C	rs141931104	by1000genomes	TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ARHGEF5	NM_005435	exon2	c.T1008C	p.N336N	.	.	287	4	142	1	T|0.891;C|0.109	229
ARPC1B	10095	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	98987539	98987539	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ARPC1B	NM_005720	exon5	c.A404G	p.K135R	.	.	151	30	52	0	.	90
ASTN1	460	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	176905453	176905453	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ASTN1	NM_004319	exon15	c.G2431T	p.V811F	.	.	97	18	48	0	.	319
ATF5	22809	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	19	50436140	50436141	+	Frame_Shift_Del	DEL	AA	AA	-	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	AA	AA	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ATF5	NM_012068	exon4	c.640_641del	p.214_214del	.	.	111	66	75	0	.	92
ATG2B	55102	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	96781503	96781503	+	Silent	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ATG2B	NM_018036	exon23	c.C3630T	p.S1210S	.	.	146	19	116	0	.	93
ATP8A1	10396	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	42571193	42571193	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ATP8A1	NM_006095	exon15	c.G1325A	p.C442Y	.	.	340	73	268	0	.	92
ATR	545	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	142217617	142217617	+	Splice_Site	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ATR	NM_001184	exon33	c.5381-1G>T	.	.	.	142	42	110	0	.	1139
AXIN1	8312	broad.mit.edu	37	16	348239	348239	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	AXIN1	NM_181050	exon6	c.G1267T	p.E423X	.	.	6	5	9	0	.	684
BOD1L1	259282	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	13604910	13604910	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_148894	exon10	c.A3614G	p.K1205R	.	.	111	41	69	0	.	.
BRSK2	9024	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	11	1464728	1464728	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	BRSK2	NM_001256630	exon8	c.C781T	p.P261S	.	.	46	20	33	0	.	333
BRWD3	254065	hgsc.bcm.edu;broad.mit.edu	37	X	79937564	79937576	+	Frame_Shift_Del	DEL	AACTTCATTTGTT	AACTTCATTTGTT	-	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	AACTTCATTTGTT	AACTTCATTTGTT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	BRWD3	NM_153252	exon39	c.4415_4427del	p.1472_1476del	.	.	83	13	40	0	.	134
BTBD16	118663	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	124090748	124090748	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	BTBD16	NM_144587	exon12	c.A1061T	p.Q354L	.	.	81	18	62	0	.	91
BTN1A1	696	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	26505270	26505270	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	BTN1A1	NM_001732	exon3	c.G545A	p.G182E	.	.	205	88	101	1	.	92
BYSL	705	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	41889314	41889314	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	BYSL	NM_004053	exon1	c.A14T	p.K5M	.	.	119	35	76	0	.	90
C11orf71	54494	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	114271008	114271008	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_001271562	exon1	c.A46T	p.R16W	.	.	158	60	87	0	.	.
C16orf96	342346	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	16	4606659	4606659	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_001145011	exon1	c.C169T	p.Q57X	.	.	81	21	51	0	.	.
C21orf59	56683	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	21	33975557	33975557	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	C21orf59	NM_021254	exon5	c.G580T	p.A194S	.	.	101	26	74	0	.	90
C3orf20	84077	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	14745959	14745959	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	C3orf20	NM_032137	exon7	c.A994G	p.T332A	.	.	205	30	119	0	.	94
C5orf22	55322	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	31538578	31538578	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	C5orf22	NM_018356	exon4	c.T589G	p.S197A	.	.	176	56	133	0	.	92
C6orf165	154313	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	88138481	88138481	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	C6orf165	NM_001031743	exon9	c.G1098T	p.M366I	.	.	197	32	143	0	.	90
CA8	767	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	61135274	61135274	+	Silent	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	CA8	NM_004056	exon7	c.C672A	p.I224I	.	.	69	28	62	0	.	90
CADPS2	93664	broad.mit.edu;mdanderson.org	37	7	122526241	122526241	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	CADPS2	NM_001167940	exon1	c.G151T	p.G51C	.	.	68	13	13	0	.	94
CCDC168	643677	hgsc.bcm.edu	37	13	103392902	103392903	+	Frame_Shift_Ins	INS	-	-	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_001146197	exon4	c.10145_10146insA	p.R3382fs	.	.	32	14	21	0	.	.
CCL8	6355	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	32647344	32647344	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	CCL8	NM_005623	exon2	c.A133G	p.I45V	.	.	38	29	54	0	.	90
CCPG1	9236	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	55651833	55651833	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	CCPG1	NM_020739	exon8	c.A2138T	p.E713V	.	.	111	11	63	0	.	91
CCR1	1230	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	46245458	46245458	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	CCR1	NM_001295	exon2	c.G347T	p.G116V	.	.	166	44	108	1	.	660
CCR2	729230	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	46400024	46400024	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	CCR2	NM_001123396	exon2	c.T1006C	p.Y336H	.	.	79	22	41	0	.	568
CCR3	1232	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	46307579	46307579	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	CCR3	NM_178328	exon3	c.G993T	p.K331N	.	.	63	23	29	0	.	660
CCT3	7203	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	156294772	156294772	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	CCT3	NM_005998	exon6	c.A413G	p.K138R	.	.	41	26	37	0	.	92
CDC40	51362	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	6	110540596	110540596	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	CDC40	NM_015891	exon11	c.A1120T	p.K374X	.	.	115	18	99	0	.	90
CDKL4	344387	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	39414810	39414810	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	CDKL4	NM_001009565	exon6	c.C693A	p.N231K	.	.	77	37	58	0	.	334
CELF5	60680	broad.mit.edu	37	19	3285980	3285980	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	CELF5	NM_021938	exon10	c.C1143A	p.S381R	.	.	19	3	14	0	.	92
CELSR3	1951	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	48686612	48686612	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	CELSR3	NM_001407	exon17	c.G6509T	p.W2170L	.	.	66	13	50	0	.	523
CEP104	9731	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	3740103	3740103	+	Silent	SNP	C	C	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	CEP104	NM_014704	exon19	c.G2388C	p.T796T	.	.	57	17	56	0	.	92
CHD9	80205	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	16	53296958	53296958	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	CHD9	NM_025134	exon20	c.G4269A	p.W1423X	.	.	63	17	55	0	.	272
CHL1	10752	broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	384669	384669	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	CHL1	NM_001253388	exon6	c.A682G	p.K228E	.	.	207	55	132	2	.	583
CHSY3	337876	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	5	129520910	129520910	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	CHSY3	NM_175856	exon3	c.A2075T	p.K692M	.	.	135	12	93	0	.	25
CNOT1	23019	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	16	58585618	58585629	+	In_Frame_Del	DEL	CCTGGGCCTGAG	CCTGGGCCTGAG	-	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	CCTGGGCCTGAG	CCTGGGCCTGAG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	CNOT1	NM_206999	exon23	c.3065_3076del	p.1022_1026del	.	.	59	19	52	0	.	95
CNRIP1	25927	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	68546450	68546450	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	CNRIP1	NM_001111101	exon1	c.A83G	p.D28G	.	.	57	25	26	0	.	69
CNTN5	53942	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	99715953	99715953	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	CNTN5	NM_001243270	exon5	c.T536A	p.V179E	.	.	56	15	43	0	.	366
COL6A1	1291	hgsc.bcm.edu;broad.mit.edu;mdanderson.org	37	21	47423312	47423312	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	COL6A1	NM_001848	exon35	c.C2472G	p.F824L	.	.	19	6	8	0	.	91
COLEC12	81035	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	18	334785	334785	+	Silent	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	COLEC12	NM_130386	exon6	c.C1773T	p.P591P	.	.	97	19	87	0	.	92
COLGALT2	23127	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	183909842	183909842	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_015101	exon11	c.T1477A	p.Y493N	.	.	338	63	215	2	.	.
COX18	285521	mdanderson.org	37	4	73935347	73935347	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	COX18	NM_173827	exon1	c.G20C	p.G7A	.	.	11	5	8	0	.	90
CREBBP	1387	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	3860606	3860606	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	CREBBP	NM_001079846	exon3	c.A973T	p.M325L	.	.	92	38	74	0	.	1807
CRLF2	64109	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	1327776	1327776	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	CRLF2	NM_022148	exon2	c.C105G	p.I35M	.	.	460	65	385	0	.	299
CRYGD	1421	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	2	208986520	208986520	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	CRYGD	NM_006891	exon3	c.C402A	p.Y134X	.	.	98	48	80	0	.	90
CTH	1491	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	70881649	70881649	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	CTH	NM_153742	exon2	c.A179G	p.Y60C	.	.	60	23	55	0	.	91
CTHRC1	115908	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	8	104384015	104384015	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	CTHRC1	NM_138455	exon1	c.A131G	p.Q44R	.	.	158	40	96	0	.	91
CTSB	1508	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	11705647	11705647	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	CTSB	NM_147780	exon8	c.A461G	p.Y154C	.	.	78	38	54	0	.	90
CUBN	8029	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	17157488	17157488	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	CUBN	NM_001081	exon7	c.G702A	p.M234I	.	.	68	31	58	0	.	166
CYP2A13	1553	ucsc.edu	37	19	41596322	41596322	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	CYP2A13	NM_000766	exon4	c.T507G	p.D169E	.	.	160	1	91	1	.	93
DCAKD	79877	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	43101864	43101864	+	Silent	SNP	T	T	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	DCAKD	NM_001128631	exon5	c.A633G	p.T211T	.	.	35	29	56	0	.	90
DCD	117159	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	55040905	55040905	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	DCD	NM_053283	exon2	c.C97A	p.P33T	.	.	33	5	29	0	.	91
DDI1	414301	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	103908253	103908253	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	DDI1	NM_001001711	exon1	c.C703A	p.P235T	.	.	102	58	76	0	.	137
DEF6	50619	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	35287441	35287441	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	DEF6	NM_022047	exon8	c.A1356C	p.E452D	.	.	164	64	91	0	.	227
DENND4A	10260	broad.mit.edu	37	15	65994116	65994116	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	DENND4A	NM_001144823	exon18	c.A2543G	p.Y848C	.	.	323	8	201	0	.	229
DENND4A	10260	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	66031083	66031083	+	Silent	SNP	T	T	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	DENND4A	NM_001144823	exon6	c.A762G	p.V254V	.	.	192	54	120	0	.	229
DFFB	1677	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	3775376	3775376	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	DFFB	NM_004402	exon2	c.T209G	p.V70G	.	.	53	13	43	1	.	91
DGCR14	8220	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	19132075	19132075	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	DGCR14	NM_022719	exon1	c.G79A	p.E27K	.	.	74	35	57	0	.	116
DHX57	90957	broad.mit.edu;bcgsc.ca;mdanderson.org	37	2	39081308	39081308	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	DHX57	NM_198963	exon9	c.A1918G	p.R640G	.	.	76	24	73	1	.	228
DIS3L	115752	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	15	66621720	66621720	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	DIS3L	NM_001143688	exon14	c.A2518G	p.I840V	.	.	160	18	98	0	.	92
DNAH12	201625	broad.mit.edu;bcgsc.ca;mdanderson.org	37	3	57419403	57419403	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	DNAH12	NM_178504	exon31	c.T4739A	p.L1580H	.	.	70	8	37	0	.	47
DNAJB14	79982	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	4	100822217	100822218	+	Frame_Shift_Ins	INS	-	-	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	DNAJB14	NM_001031723	exon8	c.1108_1109insA	p.E370fs	.	.	237	97	192	0	.	226
DSPP	1834	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	88535128	88535128	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	DSPP	NM_014208	exon5	c.C1314A	p.H438Q	.	.	191	28	145	0	.	90
DYNC2H1	79659	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	11	102984322	102984322	+	Silent	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	DYNC2H1	NM_001377	exon2	c.A252G	p.E84E	.	.	224	9	135	0	.	68
EDNRA	1909	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	148441067	148441067	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	EDNRA	NM_001957	exon3	c.C485A	p.P162H	.	.	112	53	75	0	.	586
EFCAB14	9813	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	47144177	47144177	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_014774	exon11	c.G1444A	p.G482R	.	.	60	19	41	0	.	.
EGF	1950	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	110915962	110915962	+	Silent	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	EGF	NM_001963	exon20	c.C2931T	p.P977P	.	.	62	19	42	0	.	524
ELAVL2	1993	broad.mit.edu	37	9	23705038	23705038	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ELAVL2	NM_001171195	exon4	c.T365C	p.I122T	.	.	60	4	62	0	.	516
EML5	161436	broad.mit.edu	37	14	89131793	89131793	+	Silent	SNP	T	T	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	EML5	NM_183387	exon22	c.A3165G	p.L1055L	.	.	179	5	125	0	.	93
ENAH	55740	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	1	225707015	225707018	+	Frame_Shift_Del	DEL	TCTT	TCTT	-	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	TCTT	TCTT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ENAH	NM_001008493	exon5	c.684_687del	p.228_229del	.	.	93	22	56	0	.	516
EPB42	2038	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	43502619	43502619	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	EPB42	NM_000119	exon5	c.G658T	p.D220Y	.	.	40	7	33	0	.	92
EPHA7	2045	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	93969103	93969103	+	Silent	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	EPHA7	NM_004440	exon10	c.C1893T	p.S631S	.	.	92	62	90	0	.	1453
EPN2	22905	broad.mit.edu	37	17	19186931	19186931	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	EPN2	NM_148921	exon3	c.A499C	p.T167P	.	.	44	4	27	2	.	91
ERBB2IP	55914	broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	65370901	65370901	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ERBB2IP	NM_001253699	exon23	c.A3827G	p.N1276S	.	.	219	65	151	2	.	653
ERBB3	2065	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	12	56486845	56486845	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ERBB3	NM_001982	exon11	c.G1259T	p.G420V	.	.	77	12	56	0	.	1403
ERBB3	2065	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	56486836	56486836	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ERBB3	NM_001982	exon11	c.C1250T	p.T417I	.	.	80	12	62	0	.	1403
EYA1	2138	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	72211880	72211880	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	EYA1	NM_000503	exon8	c.C632T	p.S211L	.	.	90	14	58	0	.	652
FAM104B	90736	broad.mit.edu;bcgsc.ca	37	X	55187569	55187569	+	Splice_Site	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	FAM104B	NM_138362	exon2	c.20+1G>A	.	.	.	58	5	47	0	.	130
FAM171B	165215	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	187627500	187627500	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	FAM171B	NM_177454	exon8	c.A2431G	p.T811A	.	.	241	102	186	0	.	141
FAM189A2	9413	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	72000833	72000833	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	FAM189A2	NM_004816	exon9	c.G826T	p.D276Y	.	.	58	24	65	0	.	90
FAM35A	54537	broad.mit.edu	37	10	88911348	88911348	+	Silent	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	FAM35A	NM_019054	exon3	c.A237G	p.A79A	.	.	334	9	252	1	.	94
FAM65C	140876	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	49221275	49221275	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	FAM65C	NM_080829	exon12	c.C981G	p.S327R	.	.	86	12	34	0	.	92
FASTKD2	22868	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	207634821	207634821	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	FASTKD2	NM_001136193	exon3	c.A784G	p.I262V	.	.	100	45	70	0	.	118
FAT2	2196	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	150925186	150925186	+	Silent	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	FAT2	NM_001447	exon9	c.C5502A	p.P1834P	.	.	129	26	73	0	.	96
FBN2	2201	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	127685696	127685696	+	Silent	SNP	A	A	G	rs183336575	alternate_allele	TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	FBN2	NM_001999	exon22	c.T2814C	p.D938D	.	.	71	7	54	0	A|0.999;C|0.000	146
FBN2	2201	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	127704957	127704957	+	Silent	SNP	T	T	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	FBN2	NM_001999	exon16	c.A2166G	p.A722A	.	.	92	16	60	0	.	146
FBXO24	26261	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	7	100190612	100190612	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	FBXO24	NM_012172	exon5	c.G879T	p.E293D	.	.	173	8	70	0	.	229
FBXO38	81545	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	147788727	147788727	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	FBXO38	NM_001271723	exon8	c.C909G	p.C303W	.	.	205	57	150	0	.	231
FCGBP	8857	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	40364247	40364247	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	FCGBP	NM_003890	exon31	c.C14395T	p.R4799C	.	.	89	21	38	0	.	98
FPGT	8790	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	74671023	74671023	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	FPGT	NM_003838	exon4	c.G1292A	p.G431E	.	.	137	28	129	0	.	91
FUT1	2523	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	19	49253497	49253497	+	Nonsense_Mutation	SNP	C	C	A	rs56131151	alternate_allele	TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	FUT1	NM_000148	exon4	c.G1042T	p.E348X	.	.	47	18	21	0	.	227
GABRG3	2567	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	27271951	27271951	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_001270873	exon3	c.G253T	p.V85L	.	.	150	50	143	0	.	.
GALNT3	2591	broad.mit.edu;mdanderson.org	37	2	166627194	166627194	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	GALNT3	NM_004482	exon2	c.G17T	p.R6L	.	.	23	14	9	0	.	92
GATAD2A	54815	hgsc.bcm.edu;broad.mit.edu	37	19	19612809	19612809	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	GATAD2A	NM_017660	exon10	c.G1532T	p.R511L	.	.	36	5	27	0	.	90
GCN1L1	10985	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	120594723	120594723	+	Missense_Mutation	SNP	C	C	T	rs201424442		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	GCN1L1	NM_006836	exon27	c.G3161A	p.R1054H	.	.	32	10	34	0	.	94
GIMAP6	474344	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	7	150327197	150327197	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	GIMAP6	NM_001244072	exon2	c.G34T	p.E12X	.	.	106	11	45	0	.	93
GNAS	2778	hgsc.bcm.edu;bcgsc.ca;mdanderson.org	37	20	57428390	57428390	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	GNAS	NM_080425	exon1	c.G70A	p.E24K	.	.	126	11	68	0	.	4767
GOLGB1	2804	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	121413069	121413069	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	GOLGB1	NM_001256486	exon13	c.G6301T	p.A2101S	.	.	67	9	42	0	.	161
GPR158	57512	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	25464991	25464991	+	Silent	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	GPR158	NM_020752	exon1	c.C642T	p.A214A	.	.	46	23	34	0	.	141
GPRIN1	114787	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	176025588	176025588	+	Silent	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	GPRIN1	NM_052899	exon2	c.G1248A	p.V416V	.	.	81	27	63	0	.	92
GRIA3	2892	broad.mit.edu	37	X	122460053	122460053	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	GRIA3	NM_000828	exon4	c.A685G	p.I229V	.	.	92	4	43	0	.	134
GTDC2	84892	hgsc.bcm.edu	37	3	43121653	43121653	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_032806	exon2	c.G1271A	p.R424H	.	.	81	5	56	0	.	.
GTF2IRD2P1	401375	broad.mit.edu	37	7	72663998	72663998	+	RNA	SNP	T	T	G	rs2539034	bycluster	TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	.	.	.	.	.	.	162	9	82	1	T|0.500;G|0.500	.
GTF3C3	9330	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	2	197657782	197657782	+	Silent	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	GTF3C3	NM_001206774	exon3	c.G309A	p.E103E	.	.	261	12	214	0	.	97
HBP1	26959	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	106820464	106820464	+	Silent	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	HBP1	NM_001244262	exon2	c.A156G	p.P52P	.	.	120	31	85	0	.	91
HELZ	9931	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	65144766	65144766	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	HELZ	NM_014877	exon20	c.G2540A	p.R847Q	.	.	84	55	35	0	.	92
HERC2	8924	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	28422626	28422626	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	HERC2	NM_004667	exon60	c.G9193T	p.D3065Y	.	.	109	30	60	0	.	234
HERC2P4	440362	broad.mit.edu	37	16	32163790	32163790	+	RNA	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	.	.	.	.	.	.	150	40	123	0	.	.
HGF	3082	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	81374398	81374398	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	HGF	NM_000601	exon6	c.C664A	p.L222I	.	.	59	11	35	0	.	516
HHEX	3087	broad.mit.edu;mdanderson.org	37	10	94450055	94450055	+	Silent	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	HHEX	NM_002729	exon1	c.G312T	p.P104P	.	.	88	12	62	0	.	227
HIST1H1C	3006	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	26056379	26056379	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	HIST1H1C	NM_005319	exon1	c.T278C	p.L93P	.	.	129	60	65	0	.	231
HNRNPH2	3188	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	100668006	100668006	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	HNRNPH2	NM_001032393	exon2	c.G1030T	p.A344S	.	.	111	45	75	0	.	130
HYOU1	10525	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	118922612	118922612	+	Silent	SNP	T	T	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	HYOU1	NM_006389	exon12	c.A1257T	p.A419A	.	.	104	33	64	0	.	90
IFNA8	3445	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	21409382	21409382	+	Silent	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	IFNA8	NM_002170	exon1	c.A207G	p.K69K	.	.	73	38	70	0	.	90
IL18	3606	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	112014513	112014513	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	IL18	NM_001562	exon6	c.G388A	p.D130N	.	.	81	44	60	0	.	90
IL4R	3566	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	27374563	27374563	+	Silent	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	IL4R	NM_000418	exon11	c.G1890T	p.G630G	.	.	23	5	24	1	.	227
IPO13	9670	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	44422488	44422488	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	IPO13	NM_014652	exon5	c.A1111T	p.I371F	.	.	38	19	31	0	.	226
IRF2BPL	64207	hgsc.bcm.edu	37	14	77493782	77493782	+	Silent	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	IRF2BPL	NM_024496	exon1	c.G354A	p.Q118Q	.	.	18	7	4	0	.	90
KCNIP1	30820	broad.mit.edu	37	5	170148896	170148896	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	KCNIP1	NM_001034837	exon5	c.G349A	p.V117M	.	.	197	5	116	0	.	92
KCTD16	57528	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	143586687	143586687	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	KCTD16	NM_020768	exon3	c.G410A	p.S137N	.	.	60	10	40	0	.	137
KIAA0825	285600	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	93775731	93775731	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	KIAA0825	NM_001145678	exon14	c.T2453A	p.L818Q	.	.	326	104	231	0	.	91
KIF26B	55083	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	245849630	245849630	+	Silent	SNP	T	T	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	KIF26B	NM_018012	exon12	c.T3345C	p.S1115S	.	.	98	29	68	0	.	25
KLHDC9	126823	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	1	161068351	161068351	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	KLHDC9	NM_001007255	exon1	c.G26T	p.R9L	.	.	125	29	62	0	.	22
KRT16P3	644945	broad.mit.edu	37	17	20407239	20407239	+	RNA	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	.	.	.	.	.	.	261	52	174	0	.	.
KRTAP29-1	100533177	hgsc.bcm.edu;bcgsc.ca;mdanderson.org	37	17	39458187	39458187	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_001257309	exon1	c.C917G	p.A306G	.	.	62	28	86	0	.	.
KRTDAP	388533	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	19	35978347	35978347	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	KRTDAP	NM_207392	exon6	c.283delA	p.T95fs	.	.	84	19	50	0	.	90
LAMA2	3908	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	129588356	129588356	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	LAMA2	NM_000426	exon16	c.G2314A	p.E772K	.	.	69	9	67	0	.	162
LAMC2	3918	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	1	183209512	183209512	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	LAMC2	NM_005562	exon22	c.T3314A	p.L1105H	.	.	130	11	94	0	.	93
LGALS9	3965	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	17	25972916	25972916	+	Silent	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	LGALS9	NM_009587	exon7	c.C606T	p.S202S	.	.	300	148	184	0	.	226
LOC200726	0	broad.mit.edu	37	2	207509036	207509036	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_001102659	exon2	c.T76G	p.C26G	.	.	63	5	46	0	.	.
LOC442028	0	ucsc.edu	37	2	95539132	95539132	+	RNA	SNP	A	A	G	rs74376788		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NR_037597	exon10	c.1317+2T>C	.	.	.	43	6	31	0	A|0.500;G|0.500	.
LOXL4	84171	broad.mit.edu;mdanderson.org	37	10	100011440	100011440	+	Silent	SNP	T	T	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	LOXL4	NM_032211	exon13	c.A1971T	p.A657A	.	.	62	8	44	0	.	230
LRP1	4035	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	57552232	57552232	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	LRP1	NM_002332	exon11	c.A1609G	p.I537V	.	.	58	17	61	0	.	596
LRRC47	57470	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	1	3712543	3712543	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	LRRC47	NM_020710	exon1	c.C498G	p.D166E	.	.	18	6	20	0	.	154
LTF	4057	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	3	46480950	46480950	+	Missense_Mutation	SNP	G	G	T	rs149901533	alternate_allele	TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	LTF	NM_002343	exon15	c.C1745A	p.A582D	.	.	130	37	66	0	G|0.999;A|0.000	703
MAEA	10296	broad.mit.edu	37	4	1305876	1305876	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	MAEA	NM_005882	exon2	c.G179T	p.G60V	.	.	107	6	64	2	.	91
MAG	4099	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	19	35800910	35800919	+	Frame_Shift_Del	DEL	GAGCGAGCGG	GAGCGAGCGG	-	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	GAGCGAGCGG	GAGCGAGCGG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	MAG	NM_080600	exon8	c.1365_1374del	p.455_458del	.	.	55	23	52	0	.	947
MAGEA11	4110	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	148798282	148798282	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	MAGEA11	NM_005366	exon5	c.C1136T	p.P379L	.	.	123	68	47	0	.	132
MAGEL2	54551	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	23890418	23890418	+	Silent	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_019066	exon1	c.C2472T	p.P824P	.	.	86	23	74	0	.	.
MAN2A2	4122	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	91450650	91450650	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	MAN2A2	NM_006122	exon7	c.G1121T	p.R374L	.	.	95	38	74	0	.	136
MARS	4141	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	57884114	57884114	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	MARS	NM_004990	exon6	c.G615T	p.Q205H	.	.	42	8	36	0	.	654
MCM7	4176	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	99695002	99695002	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	MCM7	NM_005916	exon10	c.A1123G	p.I375V	.	.	96	21	37	0	.	651
MEP1A	4224	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	46787312	46787312	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	MEP1A	NM_005588	exon7	c.A427G	p.I143V	.	.	95	53	59	0	.	183
METTL1	4234	ucsc.edu	37	12	58163649	58163649	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	METTL1	NM_005371	exon3	c.C365A	p.A122D	.	.	43	4	60	0	.	492
MMP9	4318	hgsc.bcm.edu;bcgsc.ca	37	20	44642129	44642129	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	MMP9	NM_004994	exon9	c.C1566A	p.D522E	.	.	119	8	61	0	.	652
MOGAT3	346606	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	100839352	100839352	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	MOGAT3	NM_178176	exon7	c.C901T	p.L301F	.	.	67	21	39	0	.	92
MRPL51	51258	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	12	6602118	6602118	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	MRPL51	NM_016497	exon2	c.A100G	p.I34V	.	.	78	33	66	0	.	90
MSN	4478	broad.mit.edu	37	X	64956699	64956699	+	Silent	SNP	G	G	A	rs113359990	bycluster	TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	MSN	NM_002444	exon9	c.G1002A	p.E334E	.	.	216	6	132	1	G|0.500;A|0.500	1086
MSN	4478	broad.mit.edu	37	X	64956743	64956743	+	Missense_Mutation	SNP	A	A	G	rs200135811		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	MSN	NM_002444	exon9	c.A1046G	p.E349G	.	.	206	6	110	1	.	1086
MTM1	4534	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	X	149818234	149818234	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	MTM1	NM_000252	exon10	c.G913A	p.E305K	.	.	149	10	62	0	.	228
MTMR7	9108	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	8	17228586	17228586	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	MTMR7	NM_004686	exon3	c.C270A	p.C90X	.	.	106	35	79	0	.	91
MUC16	94025	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	9071326	9071326	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	MUC16	NM_024690	exon3	c.G16120T	p.V5374L	.	.	105	21	66	0	.	566
MUC16	94025	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	9071328	9071328	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	MUC16	NM_024690	exon3	c.T16118G	p.L5373R	.	.	107	21	69	0	.	566
MUC2	4583	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	11	1097846	1097847	+	Frame_Shift_Ins	INS	-	-	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	MUC2	NM_002457	exon37	c.6927_6928insC	p.V2309fs	.	.	37	18	34	0	.	90
MUC4	4585	broad.mit.edu	37	3	195513697	195513697	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	MUC4	NM_018406	exon2	c.T4754C	p.L1585P	.	.	71	4	87	1	.	90
MUC5B	727897	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	1248993	1248993	+	Silent	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_002458	exon7	c.C756A	p.A252A	.	.	56	15	57	0	.	.
MUC6	4588	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	11	1017897	1017897	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	MUC6	NM_005961	exon31	c.C4904A	p.T1635N	.	.	282	30	285	0	.	23
MYO7B	4648	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	128380906	128380906	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	MYO7B	NM_001080527	exon28	c.A3697T	p.S1233C	.	.	58	9	29	0	.	47
NCAPH2	29781	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	50961497	50961497	+	Silent	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	NCAPH2	NM_001185011	exon19	c.C1582A	p.R528R	.	.	45	13	29	0	.	92
NEK3	4752	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	52718081	52718081	+	Silent	SNP	T	T	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	NEK3	NM_002498	exon10	c.A846G	p.K282K	.	.	82	23	74	0	.	359
NLRP9	338321	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	56223244	56223244	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	NLRP9	NM_176820	exon8	c.G2765C	p.W922S	.	.	154	53	88	0	.	294
NMNAT3	349565	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	139297767	139297767	+	Silent	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	NMNAT3	NM_178177	exon3	c.G129A	p.V43V	.	.	99	18	87	0	.	90
NOVA1	4857	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	26949267	26949267	+	Silent	SNP	T	T	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	NOVA1	NM_006489	exon3	c.A363C	p.R121R	.	.	85	30	83	0	.	229
NR2F2	7026	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	96875737	96875737	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	NR2F2	NM_021005	exon1	c.C403A	p.R135S	.	.	157	40	97	0	.	228
NSUN5P2	260294	bcgsc.ca;mdanderson.org	37	7	72419590	72419590	+	RNA	SNP	A	A	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	NSUN5P2	.	.	.	.	.	.	165	34	63	0	.	90
NT5C2	22978	broad.mit.edu;bcgsc.ca;mdanderson.org	37	10	104899213	104899213	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	NT5C2	NM_012229	exon4	c.C125G	p.A42G	.	.	75	7	58	1	.	90
NUDT10	170685	broad.mit.edu	37	X	51076024	51076024	+	Silent	SNP	G	G	A	rs2801626		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	NUDT10	NM_153183	exon2	c.G207A	p.E69E	.	.	151	5	135	1	.	90
NYAP1	222950	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	100085812	100085812	+	Silent	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_173564	exon4	c.C468T	p.S156S	.	.	202	44	93	0	.	.
OPLAH	26873	broad.mit.edu	37	8	145108284	145108284	+	Missense_Mutation	SNP	G	G	T	rs186909122	by1000genomes;alternate_allele	TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	OPLAH	NM_017570	exon20	c.C2699A	p.A900D	.	.	39	6	20	1	G|0.999;A|0.000	68
OR2T1	26696	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	248569656	248569656	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	OR2T1	NM_030904	exon1	c.A361G	p.M121V	.	.	83	32	61	0	.	69
OR4C15	81309	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	55322576	55322576	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	OR4C15	NM_001001920	exon1	c.C794G	p.S265C	.	.	90	12	91	0	.	70
OR4K17	390436	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	20585602	20585602	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	OR4K17	NM_001004715	exon1	c.A37T	p.S13C	.	.	99	50	69	0	.	71
OR6P1	128366	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	158532535	158532535	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	OR6P1	NM_001160325	exon1	c.C860A	p.P287Q	.	.	131	30	77	0	.	68
OSBPL2	9885	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	60835074	60835074	+	Silent	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	OSBPL2	NM_144498	exon3	c.G75A	p.E25E	.	.	103	9	42	0	.	69
OTOGL	283310	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	80762078	80762078	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_173591	exon54	c.G6577C	p.V2193L	.	.	60	17	55	0	.	.
PALD1	27143	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	10	72289050	72289050	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_014431	exon3	c.G251T	p.R84L	.	.	38	14	14	0	.	.
PARP12	64761	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	139726111	139726111	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	PARP12	NM_022750	exon11	c.G1666T	p.A556S	.	.	95	16	41	0	.	525
PCDH11Y	83259	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	Y	4967403	4967403	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_032972	exon2	c.A1784G	p.Q595R	.	.	112	18	89	0	.	.
PCDH1	5097	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	141248170	141248170	+	Silent	SNP	T	T	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	PCDH1	NM_032420	exon2	c.A867G	p.L289L	.	.	87	11	52	0	.	95
PCDH9	5101	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	67800963	67800963	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	PCDH9	NM_203487	exon2	c.G1610A	p.R537Q	.	.	77	30	85	0	.	96
PCK2	5106	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	24572377	24572377	+	Silent	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	PCK2	NM_004563	exon9	c.C1381T	p.L461L	.	.	89	10	54	0	.	227
PCSK5	5125	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	78965753	78965753	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	PCSK5	NM_001190482	exon35	c.C4895A	p.A1632E	.	.	65	28	54	0	.	93
PDE11A	50940	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	178634089	178634089	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	PDE11A	NM_016953	exon10	c.C1750T	p.H584Y	.	.	55	27	38	0	.	93
PDE1B	5153	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	54963367	54963367	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	PDE1B	NM_000924	exon5	c.T448C	p.Y150H	.	.	111	47	90	0	.	92
PDE4C	5143	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	18321780	18321780	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	PDE4C	NM_000923	exon16	c.C2098G	p.P700A	.	.	89	34	77	0	.	94
PDHA1	5160	broad.mit.edu;bcgsc.ca	37	X	19367484	19367484	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	PDHA1	NM_001173454	exon3	c.A226G	p.I76V	.	.	82	5	75	0	.	227
PHLDB3	653583	broad.mit.edu	37	19	44006404	44006404	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	PHLDB3	NM_198850	exon3	c.C245A	p.A82D	.	.	47	6	30	1	.	68
PIK3C2B	5287	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	1	204429747	204429747	+	Silent	SNP	G	G	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	PIK3C2B	NM_002646	exon7	c.C1353G	p.R451R	.	.	144	9	60	0	.	1310
PKHD1L1	93035	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	8	110535606	110535606	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	PKHD1L1	NM_177531	exon76	c.C12475T	p.L4159F	.	.	123	7	91	0	.	145
PLCB4	5332	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	9319611	9319611	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	PLCB4	NM_182797	exon5	c.G296C	p.C99S	.	.	88	27	57	0	.	274
PLCE1	51196	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	96006140	96006140	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	PLCE1	NM_016341	exon8	c.T2858C	p.I953T	.	.	112	51	92	0	.	229
PLEK	5341	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	68613639	68613639	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	PLEK	NM_002664	exon5	c.T478A	p.C160S	.	.	77	16	50	0	.	91
PLEKHH3	79990	mdanderson.org	37	17	40825735	40825735	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	PLEKHH3	NM_024927	exon4	c.C416T	p.A139V	.	.	12	3	16	0	.	158
PLXNB2	23654	broad.mit.edu;bcgsc.ca	37	22	50721222	50721234	+	Frame_Shift_Del	DEL	GGGACCCCCCGTA	GGGACCCCCCGTA	-	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	GGGACCCCCCGTA	GGGACCCCCCGTA	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	PLXNB2	NM_012401	exon18	c.2893_2905del	p.965_969del	.	.	35	7	48	0	.	211
POLR3C	10623	broad.mit.edu	37	1	145594076	145594076	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	POLR3C	NM_006468	exon14	c.C1486A	p.R496S	.	.	223	5	108	0	.	91
POU5F1B	5462	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	128428491	128428491	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_001159542	exon1	c.A380G	p.E127G	.	.	73	34	32	0	.	.
PPAP2C	8612	broad.mit.edu;bcgsc.ca;mdanderson.org	37	19	291305	291305	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	PPAP2C	NM_003712	exon1	c.A32G	p.D11G	.	.	94	15	53	1	.	90
PPP1R13B	23368	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	104205095	104205095	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	PPP1R13B	NM_015316	exon14	c.G2785A	p.V929I	.	.	112	23	103	0	.	227
PRDM15	63977	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	21	43248679	43248679	+	Silent	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	PRDM15	NM_022115	exon19	c.G2475T	p.T825T	.	.	58	9	38	0	.	90
PRKAG2	51422	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	151254299	151254299	+	Silent	SNP	T	T	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	PRKAG2	NM_016203	exon16	c.A1698G	p.T566T	.	.	177	36	75	0	.	658
PRKDC	5591	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	48794637	48794637	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	PRKDC	.	.	.	.	.	.	63	21	47	0	.	1515
PRMT8	56341	bcgsc.ca	37	12	3692226	3692226	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	PRMT8	NM_019854	exon8	c.G831T	p.E277D	.	.	55	5	49	0	.	94
PROSER1	80209	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	39588511	39588511	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_025138	exon11	c.A878G	p.N293S	.	.	59	25	45	0	.	.
PRR12	57479	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	50119469	50119469	+	Silent	SNP	C	C	T	rs200097233		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	PRR12	NM_020719	exon9	c.C5490T	p.S1830S	.	.	58	22	26	0	C|0.999;T|0.001	70
PSG3	5671	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	43237165	43237165	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	PSG3	NM_021016	exon3	c.G480T	p.E160D	.	.	62	22	47	0	.	92
PTPN11	5781	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	112910827	112910827	+	Missense_Mutation	SNP	A	A	G	rs121918456		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	PTPN11	NM_080601	exon7	c.A836G	p.Y279C	.	.	286	126	235	0	.	7239
PTPRM	5797	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	18	7888209	7888209	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	PTPRM	NM_001105244	exon3	c.A302T	p.Y101F	.	.	86	20	97	0	.	228
RAB25	57111	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	156039508	156039508	+	Silent	SNP	C	C	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	RAB25	NM_020387	exon4	c.C480G	p.T160T	.	.	188	48	126	0	.	227
RAB8A	4218	ucsc.edu	37	19	16243054	16243054	+	Silent	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	RAB8A	NM_005370	exon8	c.A564G	p.G188G	.	.	46	2	31	0	.	227
RAD51	5888	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	40998470	40998470	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	RAD51	NM_001164270	exon4	c.A321T	p.K107N	.	.	337	108	234	0	.	563
RALGAPB	57148	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	37191272	37191272	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	RALGAPB	NM_020336	exon24	c.G3629A	p.G1210D	.	.	217	29	124	0	.	92
RASAL2	9462	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	178427346	178427346	+	Silent	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	RASAL2	NM_170692	exon14	c.A2919G	p.E973E	.	.	59	12	42	0	.	155
RBBP6	5930	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	16	24583179	24583180	+	Frame_Shift_Ins	INS	-	-	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	RBBP6	NM_006910	exon18	c.4792_4793insT	p.V1598fs	.	.	147	30	123	0	.	230
RELA	5970	ucsc.edu	37	11	65423362	65423362	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	RELA	NM_021975	exon9	c.A922T	p.T308S	.	.	49	1	68	0	.	872
REPS1	85021	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	139265148	139265148	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	REPS1	NM_001128617	exon6	c.A758G	p.Q253R	.	.	106	65	92	0	.	522
RGN	9104	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	46949222	46949222	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	RGN	NM_004683	exon4	c.G394T	p.G132W	.	.	55	7	43	0	.	130
RIF1	55183	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	152322315	152322315	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	RIF1	NM_018151	exon30	c.C6281T	p.S2094F	.	.	149	74	108	0	.	300
RMND1	55005	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	151751308	151751308	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	RMND1	NM_017909	exon5	c.G694A	p.G232R	.	.	389	56	322	0	.	90
RNF148	378925	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	7	122342607	122342620	+	Frame_Shift_Del	DEL	AGAATGATTCCCGA	AGAATGATTCCCGA	-	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	AGAATGATTCCCGA	AGAATGATTCCCGA	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	RNF148	NM_198085	exon1	c.185_198del	p.62_66del	.	.	117	23	59	0	.	204
ROBO2	6092	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	3	77607255	77607255	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ROBO2	NM_002942	exon9	c.A1392T	p.R464S	.	.	170	11	89	0	.	328
RP1L1	94137	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	10470654	10470654	+	Silent	SNP	G	G	A	rs200317816		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	RP1L1	NM_178857	exon4	c.C954T	p.D318D	.	.	95	44	57	0	G|0.999;A|0.001	139
RPGRIP1	57096	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	14	21770659	21770659	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	RPGRIP1	NM_020366	exon4	c.G503A	p.R168K	.	.	42	13	33	0	.	140
SACS	26278	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	23905055	23905055	+	Silent	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	SACS	NM_014363	exon10	c.T12960C	p.L4320L	.	.	60	27	85	0	.	298
SACS	26278	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	23905368	23905368	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	SACS	NM_014363	exon10	c.A12647G	p.D4216G	.	.	34	14	52	0	.	298
SAG	6295	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	234217900	234217900	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	SAG	NM_000541	exon2	c.G65T	p.R22L	.	.	87	39	69	0	.	23
SALL2	6297	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	21991101	21991101	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	SALL2	NM_005407	exon2	c.C2761A	p.P921T	.	.	111	37	75	0	.	92
SAMD1	90378	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	14199510	14199510	+	Silent	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_138352	exon4	c.G1113A	p.P371P	.	.	94	21	68	0	.	.
SAMD5	389432	broad.mit.edu	37	6	147830259	147830259	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	SAMD5	NM_001030060	exon1	c.G195C	p.Q65H	.	.	26	5	18	0	.	68
SCLY	51540	broad.mit.edu;mdanderson.org	37	2	239006994	239006994	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	SCLY	NM_016510	exon12	c.T1360C	p.X454Q	.	.	12	4	9	0	.	92
SCUBE1	80274	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	22	43608519	43608519	+	Silent	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	SCUBE1	NM_173050	exon17	c.G2133A	p.E711E	.	.	64	8	59	0	.	93
SDHAP1	255812	ucsc.edu	37	3	195690271	195690271	+	RNA	SNP	T	T	C	rs71248938		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	.	.	.	.	.	.	71	21	28	1	T|0.500;C|0.500	.
SFT2D2	375035	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	1	168204373	168204373	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	SFT2D2	NM_199344	exon4	c.A271T	p.K91X	.	.	213	119	136	0	.	69
SIGLECL1	284369	hgsc.bcm.edu;broad.mit.edu;mdanderson.org	37	19	51770635	51770635	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_173635	exon5	c.A419G	p.H140R	.	.	13	7	9	0	.	.
SIRPB1	10326	broad.mit.edu	37	20	1552594	1552594	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	SIRPB1	NM_006065	exon3	c.T523C	p.S175P	.	.	274	5	175	0	.	91
SLC24A1	9187	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	65917213	65917213	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_004727	exon2	c.A795T	p.E265D	.	.	178	53	92	0	.	.
SLC26A4	5172	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	107314761	107314761	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	SLC26A4	NM_000441	exon5	c.A568G	p.S190G	.	.	143	30	62	1	.	96
SLC2A5	6518	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	9117613	9117613	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	SLC2A5	NM_003039	exon3	c.G187T	p.E63X	.	.	75	26	70	0	.	517
SLC2A5	6518	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	9117614	9117614	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	SLC2A5	NM_003039	exon3	c.G186T	p.M62I	.	.	75	26	70	0	.	517
SLC38A3	10991	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	50256338	50256338	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	SLC38A3	NM_006841	exon14	c.G1264T	p.V422F	.	.	69	13	36	0	.	67
SLC4A8	9498	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	51864175	51864175	+	Splice_Site	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	SLC4A8	NM_001258401	exon13	c.1366-1G>T	.	.	.	90	34	84	0	.	95
SLC4A9	83697	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	139740530	139740530	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	SLC4A9	NM_001258428	exon2	c.C436T	p.P146S	.	.	74	13	57	0	.	67
SLCO4A1	28231	broad.mit.edu;ucsc.edu;mdanderson.org	37	20	61287812	61287812	+	Silent	SNP	C	C	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	SLCO4A1	NM_016354	exon2	c.C6G	p.P2P	.	.	20	5	16	0	.	91
SMARCA4	6597	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	11137010	11137010	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	SMARCA4	NM_003072	exon23	c.G3203T	p.G1068V	.	.	102	11	87	0	.	1523
SNX18	112574	broad.mit.edu;bcgsc.ca	37	5	53815382	53815382	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	SNX18	NM_052870	exon1	c.G1600T	p.D534Y	.	.	217	8	154	0	.	226
SP140L	93349	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	2	231256927	231256927	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	SP140L	NM_138402	exon12	c.C1090A	p.L364I	.	.	110	53	106	0	.	23
ST6GALNAC5	81849	hgsc.bcm.edu	37	1	77334301	77334301	+	Silent	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ST6GALNAC5	NM_030965	exon2	c.A135G	p.Q45Q	.	.	109	5	56	0	.	92
STAB2	55576	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	104136187	104136187	+	Silent	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	STAB2	NM_017564	exon56	c.C5886T	p.C1962C	.	.	67	27	53	0	.	104
SYT4	6860	broad.mit.edu;ucsc.edu;mdanderson.org	37	18	40854347	40854347	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	SYT4	NM_020783	exon2	c.C47T	p.T16I	.	.	21	5	14	0	.	132
TCTA	6988	broad.mit.edu	37	3	49449890	49449890	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	TCTA	NM_022171	exon1	c.C31T	p.Q11X	.	.	49	12	47	1	.	90
TCTA	6988	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	49449889	49449889	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	TCTA	NM_022171	exon1	c.G30T	p.L10F	.	.	46	12	48	0	.	90
TEKT4	150483	ucsc.edu	37	2	95542377	95542377	+	Missense_Mutation	SNP	C	C	T	rs72817671	byfrequency	TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	TEKT4	NM_144705	exon6	c.C1171T	p.R391C	.	.	42	4	16	0	C|0.704;T|0.296	155
THADA	63892	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	43819108	43819108	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	THADA	NM_001083953	exon3	c.A154G	p.I52V	.	.	128	62	99	0	.	228
THAP10	56906	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	15	71175115	71175115	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	THAP10	NM_020147	exon2	c.562delC	p.R188fs	.	.	241	74	177	0	.	92
TMCO3	55002	bcgsc.ca	37	13	114201643	114201643	+	Silent	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	TMCO3	NM_017905	exon11	c.G1719A	p.A573A	.	.	71	13	48	0	.	90
TMCO3	55002	hgsc.bcm.edu;bcgsc.ca	37	13	114201644	114201644	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	TMCO3	NM_017905	exon11	c.T1720A	p.Y574N	.	.	71	13	47	0	.	90
TMCO3	55002	hgsc.bcm.edu;broad.mit.edu	37	13	114201642	114201642	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	TMCO3	NM_017905	exon11	c.1718delC	p.A573fs	.	.	70	12	45	0	.	90
TMEM151A	256472	hgsc.bcm.edu	37	11	66062546	66062546	+	Missense_Mutation	SNP	C	C	T	rs139685357	byfrequency	TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	TMEM151A	NM_153266	exon2	c.C829T	p.R277C	.	.	12	9	0	0	C|0.998;T|0.002	90
TMEM223	79064	bcgsc.ca	37	11	62558311	62558311	+	Silent	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_001080501	exon2	c.G393A	p.Q131Q	.	.	68	5	50	0	.	.
TMEM229A	730130	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	123672284	123672284	+	Silent	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_001136002	exon1	c.C774T	p.F258F	.	.	145	24	58	0	.	.
TMEM33	55161	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	41951403	41951403	+	Splice_Site	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	TMEM33	NM_018126	exon6	c.614+1G>T	.	.	.	25	11	23	0	.	91
TMPRSS7	344805	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	111780660	111780660	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	TMPRSS7	NM_001042575	exon9	c.A959T	p.Q320L	.	.	122	35	71	0	.	70
TNRC6C	57690	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	76046694	76046694	+	Silent	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	TNRC6C	NM_018996	exon4	c.G1551A	p.V517V	.	.	52	28	32	0	.	24
TP53	7157	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	7578271	7578271	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	TP53,head_neck,carcinoma,0	TP53	NM_000546	exon6	c.A578G	p.H193R	.	.	102	83	110	0	.	70225
TPM2	7169	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	9	35685682	35685688	+	Frame_Shift_Del	DEL	CTTCTGC	CTTCTGC	-	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	CTTCTGC	CTTCTGC	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	TPM2	NM_213674	exon3	c.330_336del	p.110_112del	.	.	48	17	54	0	.	515
TPO	7173	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	2	1481040	1481040	+	Silent	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	TPO	NM_175719	exon8	c.G1002T	p.P334P	.	.	74	7	29	0	.	332
TPRG1L	127262	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	3542442	3542442	+	Silent	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	TPRG1L	NM_182752	exon3	c.A459G	p.K153K	.	.	25	6	15	0	.	68
TRAF6	7189	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	36511424	36511424	+	Silent	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	TRAF6	NM_004620	exon7	c.G1533A	p.E511E	.	.	95	29	105	0	.	660
TRAK1	22906	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	3	42243973	42243973	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	TRAK1	NM_001265608	exon13	c.1473delC	p.G491fs	.	.	211	26	123	0	.	91
TRPM4	54795	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	49686109	49686109	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	TRPM4	NM_001195227	exon11	c.A1538T	p.K513M	.	.	69	15	55	0	.	91
TUSC3	7991	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	8	15480657	15480657	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	TUSC3	NM_178234	exon2	c.T207G	p.N69K	.	.	93	34	66	0	.	516
TUSC3	7991	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	8	15480659	15480659	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	TUSC3	NM_178234	exon2	c.G209T	p.G70V	.	.	91	33	67	0	.	516
TXNDC2	84203	broad.mit.edu	37	18	9887527	9887527	+	Missense_Mutation	SNP	A	A	C	rs145411351	byfrequency;alternate_allele	TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	TXNDC2	NM_001098529	exon2	c.A1051C	p.T351P	.	.	148	9	146	3	A|1.000;G|0.000	92
UBE3C	9690	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	156974809	156974809	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	UBE3C	NM_014671	exon8	c.G778C	p.V260L	.	.	148	24	76	0	.	704
UTP20	27340	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	101750830	101750830	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	UTP20	NM_014503	exon43	c.A5661C	p.E1887D	.	.	77	11	64	0	.	155
VPS13A	23230	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	79973288	79973288	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	VPS13A	NM_001018038	exon57	c.C7969G	p.H2657D	.	.	111	40	64	0	.	161
VWA5B2	90113	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	183959188	183959188	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_138345	exon18	c.C3176G	p.P1059R	.	.	262	77	188	0	.	.
WBSCR27	155368	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	7	73256365	73256365	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	WBSCR27	NM_152559	exon2	c.G106T	p.A36S	.	.	125	15	34	0	.	90
WSB1	26118	broad.mit.edu	37	17	25630510	25630510	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	WSB1	NM_015626	exon3	c.A327G	p.I109M	.	.	105	3	42	0	.	226
XIRP2	129446	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	168106334	168106334	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	XIRP2	NM_152381	exon9	c.A8432T	p.D2811V	.	.	131	55	102	0	.	104
YEATS2	55689	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	183480001	183480001	+	Silent	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	YEATS2	NM_018023	exon15	c.C1881A	p.S627S	.	.	47	10	46	0	.	138
ZBTB43	23099	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	129595192	129595192	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ZBTB43	NM_001135776	exon2	c.A404G	p.N135S	.	.	64	22	66	0	.	91
ZC3H15	55854	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	187351141	187351141	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ZC3H15	NM_018471	exon1	c.G32A	p.G11D	.	.	116	15	80	0	.	91
ZFHX3	463	broad.mit.edu;ucsc.edu;bcgsc.ca	37	16	72984387	72984387	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ZFHX3	NM_006885	exon3	c.C3197G	p.A1066G	.	.	76	31	60	1	.	72
ZKSCAN8	7745	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	28121655	28121655	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_006298	exon6	c.C1597G	p.L533V	.	.	76	31	49	0	.	.
ZMIZ1	57178	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	81050778	81050778	+	Silent	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ZMIZ1	NM_020338	exon10	c.G603A	p.A201A	.	.	163	67	115	0	.	292
ZMIZ2	83637	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	44798889	44798889	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ZMIZ2	NM_174929	exon6	c.G823A	p.G275R	.	.	80	20	60	1	.	137
ZNF257	113835	hgsc.bcm.edu;broad.mit.edu	37	19	22271140	22271141	+	Frame_Shift_Del	DEL	TA	TA	-	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	TA	TA	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ZNF257	NM_033468	exon4	c.588_589del	p.196_197del	.	.	40	14	23	0	.	90
ZNF280C	55609	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	X	129350034	129350035	+	Frame_Shift_Ins	INS	-	-	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ZNF280C	NM_017666	exon14	c.1569_1570insT	p.L523fs	.	.	61	28	37	0	.	132
ZNF337	26152	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	20	25656381	25656381	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ZNF337	NM_015655	exon5	c.C1543A	p.R515S	.	.	97	30	72	0	.	90
ZNF337	26152	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	20	25656385	25656385	+	Missense_Mutation	SNP	C	C	G	rs190880125	alternate_allele	TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ZNF337	NM_015655	exon5	c.G1539C	p.E513D	.	.	95	30	71	0	C|0.999;T|0.001	90
ZNF44	51710	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	19	12384142	12384142	+	Missense_Mutation	SNP	T	T	C	rs61737488	byfrequency	TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ZNF44	NM_001164276	exon5	c.A1072G	p.T358A	.	.	99	7	65	0	T|0.105;C|0.895	23
ZNF468	90333	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	53344538	53344538	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ZNF468	NM_001008801	exon4	c.G1009A	p.A337T	.	.	61	23	42	0	.	92
ZNF586	54807	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	19	58290644	58290644	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ZNF586	NM_001077426	exon2	c.G562T	p.E188X	.	.	52	12	37	0	.	92
ZNF611	81856	broad.mit.edu	37	19	53209299	53209299	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ZNF611	NM_030972	exon7	c.G1009T	p.D337Y	.	.	98	4	69	0	.	91
ZNF728	388523	broad.mit.edu;ucsc.edu	37	19	23159202	23159202	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_001267716	exon4	c.A937G	p.K313E	.	.	15	8	10	0	.	.
ZNF831	128611	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	57766370	57766370	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ZNF831	NM_178457	exon1	c.G296T	p.G99V	.	.	55	11	26	0	.	126
ZNF845	91664	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	19	53848860	53848860	+	Silent	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_138374	exon3	c.G117A	p.E39E	.	.	59	29	31	0	.	.
ZSCAN25	221785	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	99226838	99226838	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_145115	exon8	c.C830T	p.A277V	.	.	117	27	58	0	.	.
ZXDC	79364	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	3	126194031	126194032	+	Frame_Shift_Ins	INS	-	-	T	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	ZXDC	NM_025112	exon1	c.678_679insA	p.K226fs	.	.	217	34	120	0	.	91
ZYG11A	440590	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	53352689	53352689	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	NM_001004339	exon13	c.G2068A	p.A690T	.	.	87	12	59	0	.	.
C10orf128	170371	ucsc.edu	37	10	50374902	50374903	+	Missense_Mutation	DNP	CA	CA	AC	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	CA	CA	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	.	.	.	p.CG104WC	.	.	.	.	.	.	.	
KRT83	3889	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	52715018	52715019	+	Missense_Mutation	DNP	GG	GG	CT	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	GG	GG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	.	.	.	p.A34E	.	.	.	.	.	.	.	
ITGB4	3691	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	73738729	73738730	+	Missense_Mutation	DNP	TC	TC	AG	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	TC	TC	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	.	.	.	p.I950K	.	.	.	.	.	.	.	
LILRA6	79168	broad.mit.edu	37	19	54745480	54745481	+	Missense_Mutation	DNP	GG	GG	TT	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	GG	GG	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	.	.	.	p.P210Q	.	.	.	.	.	.	.	
TEKT4	150483	ucsc.edu	37	2	95542418	95542419	+	Missense_Mutation	DNP	TG	TG	CA	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	TG	TG	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	.	.	.	p.A405T	.	.	.	.	.	.	.	
HHATL	57467	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	42735224	42735225	+	Missense_Mutation	DNP	AG	AG	TT	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	AG	AG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	.	.	.	p.L378K	.	.	.	.	.	.	.	
TRAK1	22906	hgsc.bcm.edu;bcgsc.ca	37	3	42243975	42243976	+	Nonsense_Mutation	DNP	CC	CC	AA	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	CC	CC	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	.	.	.	p.S492*	.	.	.	.	.	.	.	
FILIP1L	11259	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	99567271	99567272	+	Missense_Mutation	DNP	AG	AG	GT	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	AG	AG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	.	.	.	p.P1083H	.	.	.	.	.	.	.	
MUC4	4585	bcgsc.ca	37	3	195511333	195511334	+	Missense_Mutation	DNP	CT	CT	TC	novel		TCGA-MI-A75G-01A-11D-A32G-10	TCGA-MI-A75G-10A-01D-A32G-10	CT	CT	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	451ee39d-272a-47c5-9b55-cc1613bb6d2e	5d7b05ce-69de-4444-9baf-bb330ccce549	.	.	.	.	.	p.S2373D	.	.	.	.	.	.	.	
