Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Trna_tot	Trna_ref	Trna_var	Trna_alt1	Trna_alt2
NOL9	79707	hgsc.bcm.edu	37	1	6614391	6614391	+	Missense_Mutation	SNP	A	A	C	rs6693391	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
PER3	8863	ucsc.edu	37	1	7890055	7890055	+	Silent	SNP	T	T	A	rs11121034	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	4	4	0	0	0
TMEM201	199953	hgsc.bcm.edu	37	1	9667767	9667767	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	1	1	0	0	0
AKR7A3	22977	bcgsc.ca	37	1	19611227	19611227	+	Silent	SNP	G	G	A	rs1065658	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	5	5	0	0	0
EPHA8	2046	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	22903176	22903176	+	Missense_Mutation	SNP	G	G	C	rs62642541	byfrequency;alternate_allele	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
OPRD1	4985	hgsc.bcm.edu	37	1	29138975	29138975	+	Missense_Mutation	SNP	G	G	T	rs1042114	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
EPHA10	284656	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	38192880	38192880	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
BMP8A	353500	hgsc.bcm.edu	37	1	39957913	39957913	+	Missense_Mutation	SNP	A	A	G	rs4660269	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
LOC728989	0	bcgsc.ca	37	1	146494631	146494631	+	RNA	SNP	C	C	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
SETDB1	9869	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	150902468	150902468	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	2	2	0	0	0
DENND4B	9909	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	153911506	153911506	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	1	1	0	0	0
METTL18	92342	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	169762072	169762072	+	Silent	SNP	T	T	C	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	32	22	8	2	0
TOR3A	64222	hgsc.bcm.edu	37	1	179051300	179051300	+	Missense_Mutation	SNP	T	T	C	rs2296377	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	1	0	1	0	0
TMEM63A	9725	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	226050027	226050027	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	9	7	2	0	0
ZBTB18	10472	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	244217637	244217637	+	Silent	SNP	C	C	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
OR6F1	343169	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	247875887	247875887	+	Silent	SNP	G	G	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
OR14I1	401994	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	248845366	248845366	+	Silent	SNP	G	G	A	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
FRMD4A	55691	broad.mit.edu	37	10	13699134	13699142	+	In_Frame_Del	DEL	CGCCCCCCG	CGCCCCCCG	-	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
RBP3	5949	broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	48382020	48382020	+	Missense_Mutation	SNP	C	C	T	rs140740560		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
VSTM4	196740	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	50311823	50311823	+	Silent	SNP	T	T	A	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
CRTAC1	55118	bcgsc.ca	37	10	99696003	99696003	+	Silent	SNP	G	G	A	rs35027739	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
FAM178A	55719	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	102684506	102684506	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
NFKB2	4791	hgsc.bcm.edu	37	10	104159196	104159196	+	Silent	SNP	A	A	G	rs4919633	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	1	0	1	0	0
C10orf137	26098	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	127422004	127422004	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
MGMT	4255	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	131565182	131565182	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	60	50	10	0	0
PWWP2B	170394	hgsc.bcm.edu	37	10	134219045	134219045	+	Silent	SNP	C	C	T	rs11146364	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	36	15	21	0	0
EPS8L2	64787	hgsc.bcm.edu	37	11	725736	725736	+	Silent	SNP	G	G	A	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
KRTAP5-5	439915	hgsc.bcm.edu	37	11	1651229	1651229	+	Silent	SNP	G	G	A	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
SAA2	6289	bcgsc.ca	37	11	18266989	18266989	+	Missense_Mutation	SNP	T	T	C	rs202101890	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	T	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	2	0	2	0	0
CELF1	10658	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	47505954	47505954	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	1	1	0	0	0
OR5D18	219438	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	55587904	55587904	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
YPEL4	219539	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	57414559	57414559	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	1	0	1	0	0
TMEM132A	54972	hgsc.bcm.edu	37	11	60701987	60701987	+	Silent	SNP	G	G	A	rs7715	bycluster;byfrequency;by2hit2allele;by1000genomes	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	107	0	107	0	0
C11orf95	65998	hgsc.bcm.edu	37	11	63531175	63531175	+	Silent	SNP	C	C	G	rs2959886	bycluster;byfrequency;by2hit2allele;by1000genomes	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
FRMD8	83786	ucsc.edu;bcgsc.ca	37	11	65161744	65161744	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	6	6	0	0	0
GAL3ST3	89792	hgsc.bcm.edu	37	11	65810209	65810209	+	Silent	SNP	C	C	T	rs61895584	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
FAM86C2P	645332	broad.mit.edu	37	11	67560494	67560494	+	RNA	SNP	T	T	C	rs61894309		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
FCHSD2	9873	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	72578934	72578934	+	Silent	SNP	C	C	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
FAT3	120114	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	92624213	92624213	+	Silent	SNP	G	G	A	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
MTNR1B	4544	hgsc.bcm.edu	37	11	92702962	92702962	+	Missense_Mutation	SNP	G	G	A	rs8192552	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
MMP12	4321	broad.mit.edu	37	11	102737064	102737064	+	RNA	SNP	G	G	C	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
CYP27B1	1594	broad.mit.edu	37	12	58158993	58158993	+	Silent	SNP	G	G	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	4	4	0	0	0
ANO4	121601	bcgsc.ca	37	12	101437361	101437361	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
FAM109A	144717	hgsc.bcm.edu	37	12	111800827	111800835	+	In_Frame_Del	DEL	GCCACCCCC	GCCACCCCC	-	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	GCCACCCCC	GCCACCCCC	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
RB1	5925	broad.mit.edu;ucsc.edu;bcgsc.ca	37	13	48953769	48953769	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	2	2	0	0	0
UPF3A	65110	broad.mit.edu	37	13	115047559	115047559	+	Silent	SNP	C	C	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	3	3	0	0	0
ZNF219	51222	hgsc.bcm.edu	37	14	21560753	21560758	+	In_Frame_Del	DEL	GAGGCT	GAGGCT	-	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	GAGGCT	GAGGCT	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
C14orf93	60686	broad.mit.edu;ucsc.edu;bcgsc.ca	37	14	23456607	23456607	+	Silent	SNP	G	G	A	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	20	17	3	0	0
PRKD1	5587	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	30066912	30066912	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	6	4	2	0	0
RALGAPA1	253959	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	14	36155747	36155747	+	Splice_Site	DEL	C	C	-	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
SFTA3	253970	broad.mit.edu	37	14	36946275	36946275	+	Silent	SNP	G	G	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
PYGL	5836	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	51383442	51383442	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
KIF26A	26153	hgsc.bcm.edu	37	14	104644099	104644099	+	Silent	SNP	T	T	C	rs2497297	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
HERC2P2	400322	broad.mit.edu	37	15	23283044	23283044	+	RNA	SNP	T	T	C	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	55	55	0	0	0
NPAP1	23742	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	15	24921531	24921531	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
TRPM1	4308	bcgsc.ca	37	15	31295151	31295151	+	Missense_Mutation	SNP	T	T	G	rs17227996	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	T	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
MEX3B	84206	hgsc.bcm.edu	37	15	82335880	82335880	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
PKD1	5310	broad.mit.edu	37	16	2154573	2154573	+	Missense_Mutation	SNP	A	A	C	rs201238819		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	5	0	5	0	0
ECI1	1632	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	16	2293441	2293441	+	Splice_Site	SNP	C	C	T	rs141975235		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
MEFV	4210	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	3293492	3293492	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
TFAP4	7023	broad.mit.edu	37	16	4310202	4310202	+	Silent	SNP	C	C	A	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	3	3	0	0	0
COQ7	10229	hgsc.bcm.edu	37	16	19079037	19079037	+	Silent	SNP	G	G	A	rs17357834	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	9	1	8	0	0
SH2B1	25970	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	16	28878100	28878100	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	12	10	2	0	0
GFOD2	81577	broad.mit.edu;bcgsc.ca	37	16	67709785	67709785	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	10	10	0	0	0
ZFPM1	161882	hgsc.bcm.edu	37	16	88599697	88599705	+	In_Frame_Del	DEL	AGCCTCTGG	AGCCTCTGG	-	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	AGCCTCTGG	AGCCTCTGG	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
TRPV3	162514	broad.mit.edu	37	17	3432169	3432169	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
NLGN2	57555	bcgsc.ca	37	17	7318935	7318935	+	Silent	SNP	C	C	T	rs12947017	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
CHD3	1107	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	7794051	7794051	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
KIAA0100	9703	bcgsc.ca	37	17	26955337	26955337	+	Missense_Mutation	SNP	G	G	A	rs61743603	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	5	5	0	0	0
LRRC37A11P	342666	bcgsc.ca	37	17	37201431	37201431	+	RNA	SNP	A	A	G	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	A	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
TOP2A	7153	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	38555090	38555090	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	6	1	5	0	0
ATP6V0A1	535	broad.mit.edu	37	17	40651060	40651060	+	Missense_Mutation	SNP	T	T	C	rs149805487	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
COL1A1	1277	broad.mit.edu;bcgsc.ca	37	17	48277173	48277173	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	4	4	0	0	0
MED13	9969	broad.mit.edu	37	17	60107244	60107244	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
FTSJ3	117246	bcgsc.ca	37	17	61901197	61901197	+	Missense_Mutation	SNP	T	T	A	rs2727288	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	T	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	22	22	0	0	0
TEX2	55852	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	62254810	62254810	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	12	9	3	0	0
RECQL5	9400	broad.mit.edu	37	17	73627242	73627242	+	Missense_Mutation	SNP	C	C	T	rs201834853		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
CBX8	57332	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	17	77769859	77769861	+	In_Frame_Del	DEL	GAG	GAG	-	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	GAG	GAG	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
AATK	9625	hgsc.bcm.edu	37	17	79096115	79096115	+	Missense_Mutation	SNP	C	C	T	rs61738821	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	1	0	1	0	0
FASN	2194	hgsc.bcm.edu	37	17	80043739	80043739	+	Silent	SNP	A	A	G	rs2229422	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
CABLES1	91768	hgsc.bcm.edu	37	18	20716258	20716258	+	Missense_Mutation	SNP	G	G	A	rs200098768		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
CBLN2	147381	hgsc.bcm.edu	37	18	70209321	70209321	+	Silent	SNP	C	C	A	rs7237888		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
CACTIN	58509	hgsc.bcm.edu	37	19	3613346	3613346	+	Missense_Mutation	SNP	G	G	A	rs2074789	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
C19orf10	56005	hgsc.bcm.edu	37	19	4670313	4670313	+	Missense_Mutation	SNP	C	C	G	rs2270090	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	4	2	2	0	0
FBN3	84467	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	8130961	8130961	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
CD320	51293	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	8370031	8370031	+	Nonsense_Mutation	SNP	G	G	C	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	9	7	2	0	0
KANK3	256949	hgsc.bcm.edu	37	19	8400651	8400651	+	Silent	SNP	C	C	G	rs11669559	bycluster;byfrequency;byhapmap;by1000genomes	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	1	0	1	0	0
CDC37	11140	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	10506791	10506791	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	216	187	29	0	0
PGLS	25796	hgsc.bcm.edu	37	19	17622614	17622614	+	Silent	SNP	C	C	T	rs11086075	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	12	5	7	0	0
UQCRFS1	7386	hgsc.bcm.edu	37	19	29704002	29704002	+	Silent	SNP	T	T	C	rs11666764	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
UQCRFS1	7386	hgsc.bcm.edu	37	19	29704010	29704010	+	Missense_Mutation	SNP	A	A	C	rs8100724	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
LRP3	4037	broad.mit.edu	37	19	33697148	33697148	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	29	25	3	0	1
LRP3	4037	hgsc.bcm.edu	37	19	33698018	33698018	+	Missense_Mutation	SNP	C	C	T	rs11539586		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	11	5	6	0	0
MLL4	8085	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	36212357	36212357	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
PRODH2	58510	broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	36303397	36303397	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
RINL	126432	hgsc.bcm.edu	37	19	39360720	39360720	+	Missense_Mutation	SNP	G	G	A	rs8110393		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
ZNF45	7596	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	44419275	44419275	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	4	2	2	0	0
TPRX1	284355	ucsc.edu	37	19	48305650	48305650	+	Silent	SNP	C	C	T	rs112397458	bycluster;byfrequency;by1000genomes	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
ZNF701	55762	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	53085521	53085521	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	1	1	0	0	0
LILRA4	23547	ucsc.edu	37	19	54848121	54848121	+	Missense_Mutation	SNP	C	C	T	rs141881690	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
GP6	51206	hgsc.bcm.edu	37	19	55525497	55525497	+	Missense_Mutation	SNP	A	A	G	rs1671150	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
FAM110C	642273	hgsc.bcm.edu	37	2	45895	45895	+	Missense_Mutation	SNP	A	A	G	rs4241318		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
PXDN	7837	hgsc.bcm.edu	37	2	1748117	1748117	+	Silent	SNP	C	C	G	rs140134102	by1000genomes	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
TRAPPC12	51112	hgsc.bcm.edu	37	2	3391826	3391826	+	Silent	SNP	C	C	T	rs11127423		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
ARHGEF33	100271715	hgsc.bcm.edu	37	2	39187519	39187519	+	Silent	SNP	A	A	G	rs958412		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
PSD4	23550	hgsc.bcm.edu	37	2	113950832	113950871	+	Frame_Shift_Del	DEL	CAGGAGCTTCCTCCAGGCCTTGGTGCTCAGTGGGGAGACT	CAGGAGCTTCCTCCAGGCCTTGGTGCTCAGTGGGGAGACT	-	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	CAGGAGCTTCCTCCAGGCCTTGGTGCTCAGTGGGGAGACT	CAGGAGCTTCCTCCAGGCCTTGGTGCTCAGTGGGGAGACT	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
ZRANB3	84083	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	135988259	135988259	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
TTN	7273	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	179446654	179446654	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
ANKAR	150709	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	190595328	190595328	+	Splice_Site	SNP	G	G	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
ABCA12	26154	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	215847044	215847044	+	Silent	SNP	G	G	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
XKR7	343702	broad.mit.edu	37	20	30556350	30556350	+	Silent	SNP	A	A	C	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
WISP2	8839	hgsc.bcm.edu	37	20	43348735	43348735	+	Silent	SNP	C	C	A	rs2296530	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
SEMG1	6406	broad.mit.edu;ucsc.edu;bcgsc.ca	37	20	43836470	43836470	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
TMEM189	387521	hgsc.bcm.edu	37	20	48770159	48770159	+	Missense_Mutation	SNP	T	T	C	rs232733		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	1	0	1	0	0
COL18A1	80781	broad.mit.edu	37	21	46911183	46911183	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
LZTR1	8216	broad.mit.edu	37	22	21350330	21350330	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
TPST2	8459	broad.mit.edu	37	22	26937357	26937357	+	Silent	SNP	G	G	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	9	8	1	0	0
TRIOBP	11078	hgsc.bcm.edu	37	22	38122462	38122462	+	Missense_Mutation	SNP	A	A	G	rs739138	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
RRP7A	27341	bcgsc.ca	37	22	42912106	42912106	+	Missense_Mutation	SNP	C	C	T	rs1812240	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	57	57	0	0	0
ARSA	410	bcgsc.ca	37	22	51064039	51064039	+	Missense_Mutation	SNP	G	G	C	rs743616	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	36	36	0	0	0
GOLGA4	2803	bcgsc.ca	37	3	37368758	37368758	+	Missense_Mutation	SNP	T	T	C	rs78214260	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	T	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
ZNF589	51385	bcgsc.ca	37	3	48309828	48309828	+	Missense_Mutation	SNP	C	C	G	rs11718329	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	1	1	0	0	0
RBM15B	29890	hgsc.bcm.edu	37	3	51429553	51429553	+	Silent	SNP	A	A	G	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
LRIG1	26018	hgsc.bcm.edu	37	3	66550756	66550756	+	Missense_Mutation	SNP	G	G	C	rs1403625		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
LRIG1	26018	hgsc.bcm.edu	37	3	66550762	66550762	+	Missense_Mutation	SNP	G	G	C	rs1403626	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
SEMA5B	54437	hgsc.bcm.edu	37	3	122631896	122631896	+	Missense_Mutation	SNP	A	A	T	rs2276782	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
GP9	2815	broad.mit.edu	37	3	128780901	128780901	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
EPHB1	2047	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	134967302	134967302	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
GMPS	8833	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	155611467	155611467	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	3	1	2	0	0
TNIK	23043	bcgsc.ca	37	3	170811726	170811726	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	A	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
MUC20	200958	bcgsc.ca	37	3	195452805	195452805	+	Missense_Mutation	SNP	T	T	C	rs138659995	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	T	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	1	1	0	0	0
DOK7	285489	hgsc.bcm.edu	37	4	3495095	3495095	+	Missense_Mutation	SNP	G	G	A	rs9684786	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
ADRA2C	152	broad.mit.edu	37	4	3769013	3769013	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	28	27	0	0	1
FAM184B	27146	hgsc.bcm.edu	37	4	17643848	17643848	+	Missense_Mutation	SNP	G	G	A	rs2286771	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
DTHD1	401124	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	36296567	36296567	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
BANK1	55024	broad.mit.edu	37	4	102751014	102751014	+	Missense_Mutation	SNP	G	G	C	rs35978636	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
NSUN2	54888	hgsc.bcm.edu	37	5	6633042	6633042	+	Silent	SNP	C	C	T	rs10062086	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	1	0	1	0	0
SRD5A1	6715	hgsc.bcm.edu	37	5	6633779	6633779	+	Silent	SNP	C	C	G	rs248793	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
CTNND2	1501	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	10992734	10992734	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
IPO11	51194	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	61779887	61779887	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
PCDHA7	56141	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	140215891	140215891	+	Silent	SNP	C	C	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	9	5	4	0	0
PCDHB7	56129	broad.mit.edu	37	5	140553994	140553994	+	Silent	SNP	G	G	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	14	11	3	0	0
LOC202181	0	broad.mit.edu	37	5	177099140	177099140	+	RNA	SNP	T	T	A	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
PPP1R3G	648791	hgsc.bcm.edu	37	6	5086070	5086070	+	Silent	SNP	A	A	G	rs667752		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	12	0	12	0	0
RREB1	6239	hgsc.bcm.edu	37	6	7230680	7230680	+	Missense_Mutation	SNP	G	G	T	rs9502564	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
DAXX	1616	hgsc.bcm.edu;bcgsc.ca	37	6	33288834	33288835	+	Frame_Shift_Del	DEL	AT	AT	-	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	AT	AT	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
KCNK17	89822	hgsc.bcm.edu	37	6	39282036	39282036	+	Missense_Mutation	SNP	T	T	C	rs10947804	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
PEX6	5190	hgsc.bcm.edu	37	6	42946490	42946490	+	Silent	SNP	C	C	A	rs9462858	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	4	1	3	0	0
PAQR8	85315	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	52268605	52268605	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
EYS	346007	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	66053948	66053948	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
POU3F2	5454	hgsc.bcm.edu	37	6	99283376	99283376	+	Silent	SNP	T	T	G	rs195860		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
TBP	6908	broad.mit.edu	37	6	170871038	170871040	+	In_Frame_Del	DEL	CAA	CAA	-	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
USP42	84132	hgsc.bcm.edu	37	7	6193521	6193521	+	Missense_Mutation	SNP	G	G	C	rs61729726	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	1	0	1	0	0
PMS2CL	441194	broad.mit.edu	37	7	6776999	6776999	+	RNA	SNP	G	G	C	rs199736163	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	5	4	1	0	0
JAZF1	221895	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	27880467	27880467	+	Silent	SNP	C	C	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	15	13	2	0	0
GARS	2617	hgsc.bcm.edu	37	7	30634661	30634661	+	Missense_Mutation	SNP	C	C	G	rs1049402	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	4	3	1	0	0
NPTX2	4885	broad.mit.edu;bcgsc.ca	37	7	98254231	98254249	+	Frame_Shift_Del	DEL	CAGGCAATAGCGCCTTTAA	CAGGCAATAGCGCCTTTAA	-	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
UFSP1	402682	bcgsc.ca	37	7	100486576	100486576	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	6	6	0	0	0
VIPR2	7434	bcgsc.ca	37	7	158827326	158827326	+	Silent	SNP	G	G	A	rs2071624	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
ZNF696	79943	hgsc.bcm.edu	37	8	144378868	144378868	+	Silent	SNP	A	A	G	rs7386259	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	1	1	0	0	0
PLEC	5339	hgsc.bcm.edu	37	8	144998169	144998169	+	Silent	SNP	C	C	T	rs1140522	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
PLEC	5339	hgsc.bcm.edu	37	8	144998190	144998190	+	Silent	SNP	A	A	G	rs2857829	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
ZNF517	340385	hgsc.bcm.edu	37	8	146033347	146033347	+	Missense_Mutation	SNP	T	T	C	rs2976653		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	1	0	1	0	0
JAK2	3717	bcgsc.ca	37	9	5081780	5081780	+	Silent	SNP	G	G	A	rs2230724	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	1	1	0	0	0
ERMP1	79956	hgsc.bcm.edu	37	9	5832719	5832719	+	Missense_Mutation	SNP	G	G	C	rs13302671	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
CER1	9350	broad.mit.edu;ucsc.edu;bcgsc.ca	37	9	14720202	14720202	+	Silent	SNP	G	G	T	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
MAN1B1	11253	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	139990835	139990835	+	Silent	SNP	A	A	G	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
TUBBP5	643224	broad.mit.edu	37	9	141070946	141070946	+	RNA	SNP	G	G	A	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
COX1	5742	broad.mit.edu;bcgsc.ca	37	MT	7142	7142	+	Silent	SNP	T	T	C	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	60791	1561	59201	16	13
BEND2	139105	ucsc.edu;bcgsc.ca	37	X	18230715	18230715	+	Missense_Mutation	SNP	A	A	C	rs17274127	byfrequency	TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
IL1RAPL2	26280	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	104440271	104440271	+	Missense_Mutation	SNP	C	C	T	rs146735893		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
GPR50	9248	broad.mit.edu	37	X	150348927	150348927	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
CCDC19	25790	hgsc.bcm.edu	37	1	159858283	159858284	+	Frame_Shift_Ins	INS	-	-	ACACTGACACAAGAATAAACAGAGTTAGGGAGGGGAGAGGGAAAGCTCTCAGCACC	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	-	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
PPHLN1	51535	hgsc.bcm.edu	37	12	42839868	42839869	+	In_Frame_Ins	INS	-	-	CCCCGCAGC	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	-	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
STAB2	55576	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	12	104147000	104147001	+	Frame_Shift_Ins	INS	-	-	C	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	-	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
AVL9	23080	broad.mit.edu	37	7	32535342	32535343	+	Frame_Shift_Ins	INS	-	-	G	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10			-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
SPATA31C1	441452	hgsc.bcm.edu	37	9	90534192	90534193	+	In_Frame_Ins	INS	-	-	TCTTGTCTCCCAGCGTCA	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	-	-	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
GNAS	2778	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	57485075	57485076	+	Missense_Mutation	DNP	TG	TG	CT	novel		TCGA-OR-A5JE-01A-11D-A29I-10	TCGA-OR-A5JE-10A-01D-A29L-10	TG	TG	-	-	-	-	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina GAIIx	47acecb9-da85-4bde-8564-77cb7023e9db	37df5530-439e-480c-ae45-fdb5ec948e68	0	0	0	0	0
