Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source
ACACB	32	genome.wustl.edu	37	12	109623483	109623483	+	Missense_Mutation	SNP	A	A	G			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	12	109623483	109623483	A	G	SNP	ACACB	ENST00000338432	human	ensembl	70_37	+1	known	missense	c.1918	p.N640D	0.000	pfscan_Biotin_carboxylation_dom	pfam_AcCoA_COase_cen,pfam_Carboxyl_trans,pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_Biotin_lipoyl,superfamily_PreATP-grasp_fold,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_COA_CT_N,pfscan_COA_CT_C,pfscan_Biotin_lipoyl	-	no_errors	ACACB	HGNC
ADAMTSL1	92949	genome.wustl.edu	37	9	18776905	18776905	+	Missense_Mutation	SNP	C	C	T			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	9	18776905	18776905	C	T	SNP	ADAMTSL1	ENST00000380548	human	ensembl	70_37	+1	novel	missense	c.2678	p.T893M	1.000	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,pfam_Immunoglobulin,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTSL1	HGNC
AMY2A	279	genome.wustl.edu	37	1	104160109	104160109	+	Missense_Mutation	SNP	A	A	T			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	1	104160109	104160109	A	T	SNP	AMY2A	ENST00000414303	human	ensembl	70_37	+1	known	missense	c.47	p.Q16L	1.000	superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_13_cat_dom,pfam_A-amylase_b_C,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom,smart_A-amylase_b_C,prints_Alpha_amylase	-	no_errors	AMY2A	HGNC
ANK1	286	genome.wustl.edu	37	8	41563760	41563760	+	Splice_Site	SNP	C	C	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	8	41563760	41563760	C	A	SNP	ANK1	ENST00000396942	human	ensembl	70_37	-1	known	splice_site	c.1999-1	e18-1	1.000	-	-	-	no_errors	ANK1	HGNC
ANK3	288	genome.wustl.edu	37	10	61868601	61868601	+	Missense_Mutation	SNP	C	C	T			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	10	61868601	61868601	C	T	SNP	ANK3	ENST00000280772	human	ensembl	70_37	-1	known	missense	c.3160	p.A1054T	1.000	pfam_ZU5,smart_ZU5,pfscan_ZU5	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like,smart_Ankyrin_rpt,smart_ZU5,smart_Death,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK3	HGNC
APBA1	320	genome.wustl.edu	37	9	72071269	72071269	+	Missense_Mutation	SNP	C	C	T			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	9	72071269	72071269	C	T	SNP	APBA1	ENST00000265381	human	ensembl	70_37	-1	known	missense	c.1682	p.R561Q	1.000	pfam_PTyr_interaction_dom,smart_PTyr_interaction_dom,pfscan_PTyr_interaction_dom	pfam_PTyr_interaction_dom,pfam_PDZ,superfamily_PDZ,smart_PTyr_interaction_dom,smart_PDZ,pfscan_PDZ,pfscan_PTyr_interaction_dom	-	no_errors	APBA1	HGNC
AQPEP	206338	genome.wustl.edu	37	5	115351368	115351368	+	Missense_Mutation	SNP	G	G	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	5	115351368	115351368	G	A	SNP	AQPEP	ENST00000357872	human	ensembl	70_37	+1	known	missense	c.2662	p.E888K	0.632	NULL	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	AQPEP	Uniprot_genename
AQPEP	206338	genome.wustl.edu	37	5	115351379	115351379	+	Silent	SNP	A	A	C			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	5	115351379	115351379	A	C	SNP	AQPEP	ENST00000357872	human	ensembl	70_37	+1	known	silent	c.2673	p.I891	0.005	NULL	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	AQPEP	Uniprot_genename
ATP1A4	480	genome.wustl.edu	37	1	160156142	160156142	+	Missense_Mutation	SNP	C	C	T			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	1	160156142	160156142	C	T	SNP	ATP1A4	ENST00000368081	human	ensembl	70_37	+1	known	missense	c.3046	p.R1016C	0.989	tigrfam_ATPase_P-typ_cation-ex_asu_euk	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_ATPase_P-typ_cation-transptr_C,pfam_Dehalogen-like_hydro,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_cation_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_ATPase_P-typ_cation-exchng_asu,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_cation-ex_asu_euk,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP1A4	HGNC
BCAS3	54828	genome.wustl.edu	37	17	59155836	59155836	+	Missense_Mutation	SNP	C	C	T			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	17	59155836	59155836	C	T	SNP	BCAS3	ENST00000390652	human	ensembl	70_37	+1	known	missense	c.2318	p.T773M	1.000	NULL	pfam_BCAS3,pfam_WD40_repeat	-	no_errors	BCAS3	HGNC
C1orf112	55732	genome.wustl.edu	37	1	169798416	169798416	+	Missense_Mutation	SNP	C	C	T			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	1	169798416	169798416	C	T	SNP	C1orf112	ENST00000413811	human	ensembl	70_37	+1	known	missense	c.923	p.S308L	0.950	NULL	NULL	-	no_errors	C1orf112	HGNC
CADPS2	93664	genome.wustl.edu	37	7	122255280	122255280	+	Missense_Mutation	SNP	T	T	C			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	7	122255280	122255280	T	C	SNP	CADPS2	ENST00000449022	human	ensembl	70_37	-1	known	missense	c.1178	p.E393G	1.000	superfamily_C2_Ca/lipid-bd_dom_CaLB	pfam_Ca-dep_secretion_activator,pfam_Pleckstrin_homology,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	CADPS2	HGNC
CDKN2AIP	55602	genome.wustl.edu	37	4	184367413	184367413	+	Silent	SNP	G	G	C			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	4	184367413	184367413	G	C	SNP	CDKN2AIP	ENST00000504169	human	ensembl	70_37	+1	known	silent	c.576	p.R192	0.316	NULL	pfam_DUF3469,pfscan_Ds-RNA-bd	-	no_errors	CDKN2AIP	HGNC
CLIC5	53405	genome.wustl.edu	37	6	45909283	45909283	+	Splice_Site	SNP	C	C	T			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	6	45909283	45909283	C	T	SNP	CLIC5	ENST00000185206	human	ensembl	70_37	-1	known	splice_site	c.883+1	e4+1	1.000	-	-	-	no_errors	CLIC5	HGNC
COL22A1	169044	genome.wustl.edu	37	8	139790622	139790622	+	Missense_Mutation	SNP	C	C	T			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	8	139790622	139790622	C	T	SNP	COL22A1	ENST00000303045	human	ensembl	70_37	-1	known	missense	c.1732	p.G578R	0.218	NULL	pfam_Collagen,pfam_VWF_A,superfamily_ConA-like_lec_gl_sf,smart_VWF_A,smart_Laminin_G,pfscan_VWF_A	-	no_errors	COL22A1	HGNC
COMMD4	54939	genome.wustl.edu	37	15	75632155	75632155	+	Silent	SNP	A	A	C			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	15	75632155	75632155	A	C	SNP	COMMD4	ENST00000267935	human	ensembl	70_37	+1	known	silent	c.495	p.P165	0.102	pfam_HCaRG	pfam_HCaRG	-	no_errors	COMMD4	HGNC
CSH2	1443	genome.wustl.edu	37	17	61950693	61950693	+	Missense_Mutation	SNP	C	C	T			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	17	61950693	61950693	C	T	SNP	CSH2	ENST00000392886	human	ensembl	70_37	-1	known	missense	c.17	p.R6Q	0.000	NULL	pfam_Somatotropin,superfamily_4_helix_cytokine-like_core,prints_Somatotropin	-	no_errors	CSH2	HGNC
CTNNBL1	56259	genome.wustl.edu	37	20	36470756	36470756	+	Missense_Mutation	SNP	G	G	C			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	20	36470756	36470756	G	C	SNP	CTNNBL1	ENST00000405275	human	ensembl	70_37	+1	known	missense	c.1246	p.E416Q	1.000	superfamily_ARM-type_fold	pfam_DUF1716_euk,superfamily_ARM-type_fold	-	no_errors	CTNNBL1	HGNC
CYFIP1	23191	genome.wustl.edu	37	15	22990123	22990123	+	Nonsense_Mutation	SNP	C	C	T			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	15	22990123	22990123	C	T	SNP	CYFIP1	ENST00000313077	human	ensembl	70_37	+1	known	nonsense	c.2743	p.Q915*	1.000	pfam_Cytoplasmic_FMR1-int,pirsf_Cytoplasmic_FMR1-int_sub	pfam_Cytoplasmic_FMR1-int,pirsf_Cytoplasmic_FMR1-int_sub,prints_Cytoplasmic_FMR1-int	-	no_errors	CYFIP1	HGNC
DACT1	51339	genome.wustl.edu	37	14	59112964	59112964	+	Silent	SNP	G	G	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	14	59112964	59112964	G	A	SNP	DACT1	ENST00000335867	human	ensembl	70_37	+1	known	silent	c.1623	p.K541	0.992	NULL	NULL	-	no_errors	DACT1	HGNC
DEPDC1	55635	genome.wustl.edu	37	1	68954150	68954152	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	1	68954150	68954152	CTT	-	DEL	DEPDC1	ENST00000456315	human	ensembl	70_37	-1	known	in_frame_del	c.628_626	p.E209in_frame_del	1.000:1.000:1.000	NULL	pfam_DEP_dom,superfamily_Rho_GTPase_activation_prot,smart_DEP_dom,pfscan_DEP_dom	-	no_errors	DEPDC1	HGNC
DNAAF2	55172	genome.wustl.edu	37	14	50100351	50100351	+	Nonsense_Mutation	SNP	G	G	T			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	14	50100351	50100351	G	T	SNP	DNAAF2	ENST00000298292	human	ensembl	70_37	-1	known	nonsense	c.1517	p.S506*	0.000	NULL	pfam_PIH	-	no_errors	DNAAF2	HGNC
DNAH3	55567	genome.wustl.edu	37	16	21147833	21147833	+	Missense_Mutation	SNP	C	C	T			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	16	21147833	21147833	C	T	SNP	DNAH3	ENST00000261383	human	ensembl	70_37	-1	known	missense	c.698	p.R233K	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_Prefoldin,smart_AAA+_ATPase	-	no_errors	DNAH3	HGNC
DYNC1LI1	51143	genome.wustl.edu	37	3	32587353	32587353	+	Missense_Mutation	SNP	C	C	T			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	3	32587353	32587353	C	T	SNP	DYNC1LI1	ENST00000273130	human	ensembl	70_37	-1	known	missense	c.325	p.E109K	1.000	pfam_Dynein_light_int_chain	pfam_Dynein_light_int_chain	-	no_errors	DYNC1LI1	HGNC
EFTUD2	9343	genome.wustl.edu	37	17	42930947	42930947	+	Missense_Mutation	SNP	G	G	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	17	42930947	42930947	G	A	SNP	EFTUD2	ENST00000426333	human	ensembl	70_37	-1	known	missense	c.2404	p.H802Y	1.000	pfam_Transl_elong_EFG/EF2_IV,superfamily_Ribosomal_S5_D2-typ_fold,smart_Transl_elong_EFG/EF2_IV	pfam_EF_GTP-bd_dom,pfam_Transl_elong_EFG/EF2_IV,pfam_Transl_elong_EFG/EF2_C,pfam_Transl_elong_EFTu/EF1A_2,pfam_MIRO-like,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_Transl_elong_init/rib_B-barrel,superfamily_Elongation_fac_G/III/V,smart_Transl_elong_EFG/EF2_IV,smart_Transl_elong_EFG/EF2_C,prints_EF_GTP-bd_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	EFTUD2	HGNC
EIF2S1	1965	genome.wustl.edu	37	14	67850056	67850056	+	Missense_Mutation	SNP	G	G	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	14	67850056	67850056	G	A	SNP	EIF2S1	ENST00000256383	human	ensembl	70_37	+1	known	missense	c.847	p.E283K	1.000	superfamily_TIF2_asu_C	pfam_TIF_2_asu,pfam_Rbsml_prot_S1_RNA-bd_dom,superfamily_TIF2_asu_C,superfamily_TIF2_asu_middle,superfamily_NA-bd_OB-fold-like,smart_RNA-binding_domain_S1,pfscan_Rbsml_prot_S1_RNA-bd_dom	-	no_errors	EIF2S1	HGNC
ENOX2	10495	genome.wustl.edu	37	X	129769012	129769012	+	Silent	SNP	T	T	C			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	X	129769012	129769012	T	C	SNP	ENOX2	ENST00000338144	human	ensembl	70_37	-1	known	silent	c.1452	p.K484	0.988	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	ENOX2	HGNC
ENSG00000249106	0	genome.wustl.edu	37	4	176733194	176733194	+	RNA	SNP	G	G	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	4	176733194	176733194	G	A	SNP	ENSG00000249106	ENST00000514864	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	RP11-806K15.1	Clone_based_vega_gene
ENSG00000258843	0	genome.wustl.edu	37	14	51290144	51290144	+	RNA	SNP	C	C	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	14	51290144	51290144	C	A	SNP	ENSG00000258843	ENST00000555966	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-286O18.1	Clone_based_vega_gene
FGD2	221472	genome.wustl.edu	37	6	36979601	36979601	+	Silent	SNP	C	C	T			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	6	36979601	36979601	C	T	SNP	FGD2	ENST00000274963	human	ensembl	70_37	+1	known	silent	c.498	p.L166	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_Znf_FYVE,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_Znf_FYVE_PHD,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD2	HGNC
FOXO4	4303	genome.wustl.edu	37	X	70321381	70321381	+	Missense_Mutation	SNP	T	T	C			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	X	70321381	70321381	T	C	SNP	FOXO4	ENST00000374259	human	ensembl	70_37	+1	known	missense	c.1301	p.I434T	0.258	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXO4	HGNC
GCG	2641	genome.wustl.edu	37	2	163002166	163002166	+	Silent	SNP	G	G	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	2	163002166	163002166	G	A	SNP	GCG	ENST00000375497	human	ensembl	70_37	-1	known	silent	c.276	p.H92	0.995	NULL	pfam_Glucagon_GIP_secretin_VIP,smart_Glucagon_GIP_secretin_VIP,prints_Glucagon_GIP_secretin_VIP	-	no_errors	GCG	HGNC
GPT2	84706	genome.wustl.edu	37	16	46943727	46943727	+	Silent	SNP	C	C	T			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	16	46943727	46943727	C	T	SNP	GPT2	ENST00000340124	human	ensembl	70_37	+1	known	silent	c.708	p.D236	0.999	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase_major_dom	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase_major_dom	-	no_errors	GPT2	HGNC
GUCY2F	2986	genome.wustl.edu	37	X	108673542	108673542	+	Silent	SNP	G	G	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	X	108673542	108673542	G	A	SNP	GUCY2F	ENST00000218006	human	ensembl	70_37	-1	known	silent	c.1785	p.F595	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Haem_no_assoc-bd,superfamily_A/G_cyclase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_A/G_cyclase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,pfscan_A/G_cyclase	-	no_errors	GUCY2F	HGNC
HLA-DPB1	3115	genome.wustl.edu	37	6	33048688	33048689	+	Frame_Shift_Ins	INS	-	-	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	6	33048688	33048689	-	A	INS	HLA-DPB1	ENST00000418931	human	ensembl	70_37	+1	known	frame_shift_ins	c.340_341	p.G114fs	0.000:0.000	superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_b_N	pfam_MHC_II_b_N,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_b_N,smart_Ig_C1-set,pfscan_Ig-like	-	no_errors	HLA-DPB1	HGNC
HMCN1	83872	genome.wustl.edu	37	1	185878636	185878636	+	Frame_Shift_Del	DEL	T	T	-			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	1	185878636	185878636	T	-	DEL	HMCN1	ENST00000271588	human	ensembl	70_37	+1	known	frame_shift_del	c.789	p.L264fs	0.968	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd,pfam_Thrombospondin_1_rpt,superfamily_Green_fluorescent_prot-like,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like	-	no_errors	HMCN1	HGNC
HTATSF1	27336	genome.wustl.edu	37	X	135582899	135582899	+	Missense_Mutation	SNP	G	G	C			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	X	135582899	135582899	G	C	SNP	HTATSF1	ENST00000218364	human	ensembl	70_37	+1	known	missense	c.492	p.Q164H	0.920	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	HTATSF1	HGNC
INTS2	57508	genome.wustl.edu	37	17	59945364	59945364	+	Missense_Mutation	SNP	G	G	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	17	59945364	59945364	G	A	SNP	INTS2	ENST00000444766	human	ensembl	70_37	-1	known	missense	c.3275	p.T1092I	1.000	NULL	NULL	-	no_errors	INTS2	HGNC
IPO5	3843	genome.wustl.edu	37	13	98622062	98622062	+	Missense_Mutation	SNP	G	G	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	13	98622062	98622062	G	A	SNP	IPO5	ENST00000261574	human	ensembl	70_37	+1	known	missense	c.28	p.E10K	1.000	NULL	pfam_HEAT,superfamily_ARM-type_fold,pfscan_Importin-beta_N	-	no_errors	IPO5	HGNC
ITGB4	3691	genome.wustl.edu	37	17	73738775	73738775	+	Silent	SNP	C	C	T			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	17	73738775	73738775	C	T	SNP	ITGB4	ENST00000200181	human	ensembl	70_37	+1	known	silent	c.2895	p.I965	0.606	pirsf_Integrin_bsu-4	pfam_Integrin_bsu_N,pfam_Fibronectin_type3,pfam_Calx_beta,pfam_Integrin_bsu_tail,pfam_EGF_extracell,superfamily_Fibronectin_type3,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like,smart_Integrin_bsu_N,smart_Calx_beta,smart_Fibronectin_type3,pirsf_Integrin_bsu-4,pfscan_Fibronectin_type3,prints_Integrin_bsu	-	no_errors	ITGB4	HGNC
JPH2	57158	genome.wustl.edu	37	20	42815230	42815230	+	Missense_Mutation	SNP	G	G	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	20	42815230	42815230	G	A	SNP	JPH2	ENST00000372980	human	ensembl	70_37	-1	known	missense	c.116	p.S39F	1.000	pfam_MORN,pirsf_Junctophilin	pfam_MORN,smart_MORN,pirsf_Junctophilin	-	no_errors	JPH2	HGNC
KIAA1210	57481	genome.wustl.edu	37	X	118222151	118222151	+	Silent	SNP	C	C	G			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	X	118222151	118222151	C	G	SNP	KIAA1210	ENST00000402510	human	ensembl	70_37	-1	known	silent	c.3042	p.V1014	0.000	NULL	NULL	-	no_errors	KIAA1210	HGNC
KIF16B	55614	genome.wustl.edu	37	20	16486496	16486496	+	Missense_Mutation	SNP	C	C	T			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	20	16486496	16486496	C	T	SNP	KIF16B	ENST00000408042	human	ensembl	70_37	-1	known	missense	c.871	p.D291N	1.000	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom	pfam_Kinesin_motor_dom,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF16B	HGNC
KIF2C	11004	genome.wustl.edu	37	1	45228219	45228219	+	Missense_Mutation	SNP	A	A	T			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	1	45228219	45228219	A	T	SNP	KIF2C	ENST00000372224	human	ensembl	70_37	+1	known	missense	c.1860	p.L620F	0.896	NULL	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF2C	HGNC
LIG4	3981	genome.wustl.edu	37	13	108861175	108861175	+	Silent	SNP	T	T	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	13	108861175	108861175	T	A	SNP	LIG4	ENST00000356922	human	ensembl	70_37	-1	known	silent	c.2442	p.R814	0.888	smart_BRCT_dom,pfscan_BRCT_dom	pfam_DNA_ligase_ATP-dep_cent,pfam_DNA_ligase_ATP-dep_N,pfam_DNA_ligase_IV,pfam_BRCT_dom,pfam_DNA_ligase_ATP-dep_C,superfamily_NA-bd_OB-fold-like,superfamily_BRCT_dom,superfamily_DNA_ligase_ATP-dep_N,smart_BRCT_dom,pfscan_BRCT_dom,pfscan_DNA_ligase_ATP-dep_cent,tigrfam_DNA_ligase_ATP-dep	-	no_errors	LIG4	HGNC
LOC440993	440993	genome.wustl.edu	37	3	195412928	195412928	+	RNA	SNP	G	G	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	3	195412928	195412928	G	A	SNP	LOC440993	ENST00000414625	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC069513.3	Clone_based_vega_gene
LOC646278	646278	genome.wustl.edu	37	15	29083972	29083973	+	RNA	INS	-	-	TCT			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	15	29083972	29083973	-	TCT	INS	LOC646278	ENST00000563144	human	ensembl	70_37	+1	putative	rna	NULL	NULL	0.953:0.939	-	-	-	no_errors	RP11-578F21.12	Clone_based_vega_gene
LRP1	4035	genome.wustl.edu	37	12	57578215	57578215	+	Missense_Mutation	SNP	G	G	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	12	57578215	57578215	G	A	SNP	LRP1	ENST00000243077	human	ensembl	70_37	+1	known	missense	c.6166	p.G2056S	1.000	pfam_LDLR_classB_rpt,smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd,smart_EG-like_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP1	HGNC
LRRC8B	23507	genome.wustl.edu	37	1	90048796	90048796	+	Missense_Mutation	SNP	C	C	T			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	1	90048796	90048796	C	T	SNP	LRRC8B	ENST00000330947	human	ensembl	70_37	+1	known	missense	c.587	p.S196L	0.977	NULL	pfam_LRR_protein-8_N,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC8B	HGNC
LRRC8B	23507	genome.wustl.edu	37	1	90049129	90049129	+	Missense_Mutation	SNP	C	C	G			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	1	90049129	90049129	C	G	SNP	LRRC8B	ENST00000330947	human	ensembl	70_37	+1	known	missense	c.920	p.S307C	1.000	NULL	pfam_LRR_protein-8_N,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC8B	HGNC
MAGEA1	4100	genome.wustl.edu	37	X	152482140	152482140	+	Missense_Mutation	SNP	G	G	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	X	152482140	152482140	G	A	SNP	MAGEA1	ENST00000356661	human	ensembl	70_37	-1	known	missense	c.871	p.R291C	0.000	pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEA1	HGNC
MAGI1	9223	genome.wustl.edu	37	3	66023959	66023960	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	3	66023959	66023960	TC	-	DEL	MAGI1	ENST00000402939	human	ensembl	70_37	-1	known	frame_shift_del	c.25_24	p.N9fs	1.000:1.000	superfamily_PDZ	pfam_PDZ,pfam_WW_Rsp5_WWP,pfam_Guanylate_kin,superfamily_PDZ,superfamily_WW_Rsp5_WWP,smart_PDZ,smart_Guanylate_kin/L-typ_Ca_channel,smart_WW_Rsp5_WWP,pfscan_PDZ,pfscan_WW_Rsp5_WWP,pfscan_Guanylate_kin	-	no_errors	MAGI1	HGNC
MAGT1	84061	genome.wustl.edu	37	X	77150816	77150816	+	Missense_Mutation	SNP	C	C	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	X	77150816	77150816	C	A	SNP	MAGT1	ENST00000358075	human	ensembl	70_37	-1	known	missense	c.188	p.R63I	0.999	NULL	pfam_OligosaccharylTrfase_OST3/OST6,superfamily_Thioredoxin-like_fold	-	no_errors	MAGT1	HGNC
MAP3K13	9175	genome.wustl.edu	37	3	185191432	185191432	+	Missense_Mutation	SNP	G	G	C			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	3	185191432	185191432	G	C	SNP	MAP3K13	ENST00000265026	human	ensembl	70_37	+1	known	missense	c.2313	p.Q771H	0.000	pirsf_MAP3K12_MAP3K13	pirsf_MAP3K12_MAP3K13,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	MAP3K13	HGNC
MGAM	8972	genome.wustl.edu	37	7	141708495	141708496	+	Frame_Shift_Ins	INS	-	-	TG			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	7	141708495	141708496	-	TG	INS	MGAM	ENST00000549489	human	ensembl	70_37	+1	known	frame_shift_ins	c.317_318	p.P107fs	0.076:0.114	pfam_P_trefoil,smart_P_trefoil	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Glyco_hydro-type_carb-bd,smart_P_trefoil	-	no_errors	MGAM	HGNC
MLNR	2862	genome.wustl.edu	37	13	49796301	49796301	+	Missense_Mutation	SNP	C	C	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	13	49796301	49796301	C	A	SNP	MLNR	ENST00000218721	human	ensembl	70_37	+1	known	missense	c.1027	p.L343I	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,prints_GPCR_Rhodpsn,prints_GHS1_rcpt,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	MLNR	HGNC
MT-ATP6	4508	genome.wustl.edu	37	MT	9176	9176	+	Missense_Mutation	SNP	T	T	C			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	MT	9176	9176	T	C	SNP	MT-ATP6	ENST00000361899	human	ensembl	70_37	+1	known	missense	c.650	p.L217P	NULL	pfam_ATPase_F0-cplx_asu,superfamily_ATPase_F0-cplx_asu,prints_ATPase_F0-cplx_asu,tigrfam_ATPase_F0-cplx_asu	pfam_ATPase_F0-cplx_asu,superfamily_ATPase_F0-cplx_asu,prints_ATPase_F0-cplx_asu,tigrfam_ATPase_F0-cplx_asu	-	no_errors	MT-ATP6	HGNC
MUC4	4585	genome.wustl.edu	37	3	195512103	195512103	+	Silent	SNP	G	G	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	3	195512103	195512103	G	A	SNP	MUC4	ENST00000463781	human	ensembl	70_37	-1	known	silent	c.6348	p.T2116	0.138	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC
MUC4	4585	genome.wustl.edu	37	3	195515364	195515364	+	Silent	SNP	G	G	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	3	195515364	195515364	G	A	SNP	MUC4	ENST00000463781	human	ensembl	70_37	-1	known	silent	c.3087	p.D1029	0.000	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC
NEGR1	257194	genome.wustl.edu	37	1	72400957	72400957	+	Silent	SNP	G	G	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	1	72400957	72400957	G	A	SNP	NEGR1	ENST00000357731	human	ensembl	70_37	-1	known	silent	c.214	p.L72	1.000	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	NEGR1	HGNC
NOC4L	79050	genome.wustl.edu	37	12	132636945	132636945	+	Silent	SNP	G	G	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	12	132636945	132636945	G	A	SNP	NOC4L	ENST00000330579	human	ensembl	70_37	+1	known	silent	c.1550	p.*517	0.998	NULL	pfam_CCAAT-binding_factor,superfamily_ARM-type_fold	-	no_errors	NOC4L	HGNC
NR2E1	7101	genome.wustl.edu	37	6	108497844	108497844	+	Missense_Mutation	SNP	G	G	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	6	108497844	108497844	G	A	SNP	NR2E1	ENST00000368986	human	ensembl	70_37	+1	known	missense	c.397	p.A133T	0.949	superfamily_Nucl_hormone_rcpt_ligand-bd	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	NR2E1	HGNC
NR3C2	4306	genome.wustl.edu	37	4	149356645	149356645	+	Silent	SNP	C	C	T			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	4	149356645	149356645	C	T	SNP	NR3C2	ENST00000355292	human	ensembl	70_37	-1	known	silent	c.1368	p.S456	0.004	NULL	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	NR3C2	HGNC
OR1J1	347168	genome.wustl.edu	37	9	125239426	125239427	+	Frame_Shift_Ins	INS	-	-	AAAT			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	9	125239426	125239427	-	AAAT	INS	OR1J1	ENST00000259357	human	ensembl	70_37	-1	known	frame_shift_ins	c.780_779	p.F260fs	0.007:0.015	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1J1	HGNC
OTUD3	23252	genome.wustl.edu	37	1	20234066	20234069	+	Frame_Shift_Del	DEL	ACAA	ACAA	-			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	ACAA	ACAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	1	20234066	20234069	ACAA	-	DEL	OTUD3	ENST00000375120	human	ensembl	70_37	+1	known	frame_shift_del	c.1024_1027	p.K344fs	1.000:1.000:0.976:1.000	NULL	pfam_OTU,pfscan_OTU	-	no_errors	OTUD3	HGNC
PADI2	11240	genome.wustl.edu	37	1	17396669	17396669	+	Missense_Mutation	SNP	C	C	T			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	1	17396669	17396669	C	T	SNP	PADI2	ENST00000375486	human	ensembl	70_37	-1	known	missense	c.1678	p.G560R	1.000	pfam_PAD_C,pirsf_Protein-arginine_deiminase_sub	pfam_PAD_C,pfam_Prot_Arg_deaminase_cen_dom,pfam_PAD_N,superfamily_Prot_Arg_deaminase_cen_dom,superfamily_Cupredoxin,pirsf_Protein-arginine_deiminase_sub	-	no_errors	PADI2	HGNC
PANK4	55229	genome.wustl.edu	37	1	2447098	2447100	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	1	2447098	2447100	AGG	-	DEL	PANK4	ENST00000378466	human	ensembl	70_37	-1	known	in_frame_del	c.1277_1275	p.L426in_frame_del	0.995:1.000:1.000	superfamily_DUF89,pirsf_PanK_long	pfam_Type_II_PanK,pfam_DUF89,superfamily_DUF89,pirsf_PanK_long,tigrfam_Type_II_PanK	-	no_errors	PANK4	HGNC
PIK3CA	5290	genome.wustl.edu	37	3	178938934	178938934	+	Missense_Mutation	SNP	G	G	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	3	178938934	178938934	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	70_37	+1	known	missense	c.2176	p.E726K	1.000	superfamily_Kinase-like_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC
PPP2R2D	55844	genome.wustl.edu	37	10	133769261	133769261	+	Missense_Mutation	SNP	G	G	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	10	133769261	133769261	G	A	SNP	PPP2R2D	ENST00000455566	human	ensembl	70_37	+1	known	missense	c.1063	p.E355K	1.000	superfamily_WD40_repeat_dom,pirsf_PP2A_PR55	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_PP2A_PR55,prints_PP2A_PR55	-	no_errors	PPP2R2D	HGNC
PTPRF	5792	genome.wustl.edu	37	1	44054441	44054441	+	Missense_Mutation	SNP	G	G	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	1	44054441	44054441	G	A	SNP	PTPRF	ENST00000359947	human	ensembl	70_37	+1	known	missense	c.719	p.S240N	1.000	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRF	HGNC
PTPRM	5797	genome.wustl.edu	37	18	8380408	8380408	+	Missense_Mutation	SNP	G	G	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	18	8380408	8380408	G	A	SNP	PTPRM	ENST00000400060	human	ensembl	70_37	+1	known	missense	c.3904	p.D1302N	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Ig_sub,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRM	HGNC
RIC3	79608	genome.wustl.edu	37	11	8160038	8160039	+	RNA	INS	-	-	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	11	8160038	8160039	-	A	INS	RIC3	ENST00000524799	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RIC3	HGNC
RNF31	55072	genome.wustl.edu	37	14	24619469	24619469	+	Missense_Mutation	SNP	G	G	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	14	24619469	24619469	G	A	SNP	RNF31	ENST00000324103	human	ensembl	70_37	+1	known	missense	c.1009	p.E337K	0.187	NULL	pfam_PUB_domain,pfam_Znf_C6HC,superfamily_UBA-like,superfamily_DEATH-like,superfamily_Znf_FYVE_PHD,smart_Znf_RanBP2,smart_Znf_C6HC,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_RanBP2	-	no_errors	RNF31	HGNC
RSAD1	55316	genome.wustl.edu	37	17	48559580	48559580	+	Silent	SNP	G	G	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	17	48559580	48559580	G	A	SNP	RSAD1	ENST00000258955	human	ensembl	70_37	+1	known	silent	c.603	p.P201	0.005	pfam_rSAM,smart_Elp3/MiaB/NifB,tigrfam_Coprogen_oxidase_HemN-rel	pfam_HemN_C_dom,pfam_rSAM,smart_Elp3/MiaB/NifB,tigrfam_Coprogen_oxidase_HemN-rel	-	no_errors	RSAD1	HGNC
SEMA4B	10509	genome.wustl.edu	37	15	90767093	90767093	+	Missense_Mutation	SNP	C	C	G			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	15	90767093	90767093	C	G	SNP	SEMA4B	ENST00000332496	human	ensembl	70_37	+1	known	missense	c.1067	p.S356C	1.000	pfam_Semaphorin/CD100_Ag,superfamily_Semaphorin/CD100_Ag,smart_Semaphorin/CD100_Ag,pfscan_Semaphorin/CD100_Ag	pfam_Semaphorin/CD100_Ag,pfam_Plexin_repeat,superfamily_Semaphorin/CD100_Ag,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,pfscan_Semaphorin/CD100_Ag	-	no_errors	SEMA4B	HGNC
SETDB1	9869	genome.wustl.edu	37	1	150935585	150935585	+	Missense_Mutation	SNP	G	G	T			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	1	150935585	150935585	G	T	SNP	SETDB1	ENST00000271640	human	ensembl	70_37	+1	known	missense	c.3427	p.D1143Y	1.000	pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	pfam_SET_dom,pfam_Pre-SET_dom,pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_integrase-typ,smart_Tudor,smart_Methyl_CpG_DNA-bd,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_Methyl_CpG_DNA-bd,pfscan_SET_dom,pfscan_Pre-SET_dom,pfscan_Post-SET_dom	-	no_errors	SETDB1	HGNC
SGIP1	84251	genome.wustl.edu	37	1	67139031	67139031	+	Missense_Mutation	SNP	G	G	C			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	1	67139031	67139031	G	C	SNP	SGIP1	ENST00000237247	human	ensembl	70_37	+1	known	missense	c.640	p.D214H	1.000	NULL	pfam_Muniscin_C-term_mu_dom,pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C	-	no_errors	SGIP1	HGNC
SIGLEC11	114132	genome.wustl.edu	37	19	50464184	50464184	+	Missense_Mutation	SNP	T	T	C			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	19	50464184	50464184	T	C	SNP	SIGLEC11	ENST00000447370	human	ensembl	70_37	-1	known	missense	c.85	p.N29D	0.000	NULL	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	SIGLEC11	HGNC
SLC17A1	6568	genome.wustl.edu	37	6	25826752	25826752	+	Silent	SNP	C	C	T			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	6	25826752	25826752	C	T	SNP	SLC17A1	ENST00000244527	human	ensembl	70_37	-1	known	silent	c.144	p.V48	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Pi_cotranspt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Pi_cotranspt	-	no_errors	SLC17A1	HGNC
SNTA1	6640	genome.wustl.edu	37	20	32000556	32000556	+	Missense_Mutation	SNP	T	T	C			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	20	32000556	32000556	T	C	SNP	SNTA1	ENST00000217381	human	ensembl	70_37	-1	known	missense	c.734	p.D245G	0.962	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_PDZ,superfamily_PDZ,smart_Pleckstrin_homology,smart_PDZ,pfscan_PDZ,pfscan_Pleckstrin_homology	-	no_errors	SNTA1	HGNC
SSX7	280658	genome.wustl.edu	37	X	52681347	52681347	+	Missense_Mutation	SNP	G	G	T			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	X	52681347	52681347	G	T	SNP	SSX7	ENST00000298181	human	ensembl	70_37	-1	known	missense	c.235	p.L79I	0.000	smart_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	pfam_SSXRD_motif,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	SSX7	HGNC
STK31	56164	genome.wustl.edu	37	7	23768836	23768836	+	Missense_Mutation	SNP	C	C	T			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	7	23768836	23768836	C	T	SNP	STK31	ENST00000355870	human	ensembl	70_37	+1	known	missense	c.451	p.P151S	1.000	NULL	pfam_Tudor,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Tudor,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Tudor,pfscan_Prot_kinase_cat_dom	-	no_errors	STK31	HGNC
TAS2R43	259289	genome.wustl.edu	37	12	11244372	11244372	+	Missense_Mutation	SNP	C	C	G			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	12	11244372	11244372	C	G	SNP	TAS2R43	ENST00000531678	human	ensembl	70_37	-1	known	missense	c.457	p.V153L	0.000	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R43	HGNC
TIE1	7075	genome.wustl.edu	37	1	43779725	43779726	+	RNA	DEL	TG	TG	-			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	1	43779725	43779726	TG	-	DEL	TIE1	ENST00000471187	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.002:0.002	-	-	-	no_errors	TIE1	HGNC
TSPAN8	7103	genome.wustl.edu	37	12	71537959	71537959	+	Missense_Mutation	SNP	C	C	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	12	71537959	71537959	C	A	SNP	TSPAN8	ENST00000247829	human	ensembl	70_37	-1	known	missense	c.95	p.W32L	0.972	pfam_Tetraspanin/Peripherin,prints_Tetraspanin	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Tetraspanin	-	no_errors	TSPAN8	HGNC
TUBB1	81027	genome.wustl.edu	37	20	57598816	57598816	+	Silent	SNP	C	C	T			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	20	57598816	57598816	C	T	SNP	TUBB1	ENST00000217133	human	ensembl	70_37	+1	known	silent	c.334	p.L112	1.000	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,smart_Tubulin_FtsZ_GTPase,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,pfam_Misato_II_myosin-like,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Gamma_tubulin,prints_Alpha_tubulin	-	no_errors	TUBB1	HGNC
UBE2NL	389898	genome.wustl.edu	37	X	142967284	142967284	+	Missense_Mutation	SNP	G	G	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	X	142967284	142967284	G	A	SNP	UBE2NL	ENST00000370494	human	ensembl	70_37	+1	known	missense	c.82	p.D28N	1.000	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2NL	HGNC
USH2A	7399	genome.wustl.edu	37	1	215802256	215802256	+	Missense_Mutation	SNP	G	G	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	1	215802256	215802256	G	A	SNP	USH2A	ENST00000366943	human	ensembl	70_37	-1	known	missense	c.15491	p.S5164F	0.105	NULL	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC
VWA3A	146177	genome.wustl.edu	37	16	22126785	22126785	+	Missense_Mutation	SNP	G	G	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	16	22126785	22126785	G	A	SNP	VWA3A	ENST00000389398	human	ensembl	70_37	+1	known	missense	c.807	p.M269I	0.414	NULL	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA3A	HGNC
VWF	7450	genome.wustl.edu	37	12	6128535	6128535	+	Missense_Mutation	SNP	G	G	A			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	12	6128535	6128535	G	A	SNP	VWF	ENST00000261405	human	ensembl	70_37	-1	known	missense	c.4049	p.A1350V	0.767	pfam_VWF_A,smart_VWF_A,pirsf_VWF,pfscan_VWF_A	pfam_VWF_type-D,pfam_VWF_A,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_VWF_A,smart_Cys_knot_C,pirsf_VWF,pfscan_Cys_knot_C,pfscan_VWF_A,pfscan_VWF_C	-	no_errors	VWF	HGNC
WDR96	80217	genome.wustl.edu	37	10	105956648	105956648	+	Missense_Mutation	SNP	T	T	C			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	10	105956648	105956648	T	C	SNP	WDR96	ENST00000357060	human	ensembl	70_37	-1	known	missense	c.1256	p.D419G	0.873	superfamily_WD40_repeat_dom	superfamily_WD40_repeat_dom,superfamily_Quino_amine_DH_bsu	-	no_errors	WDR96	HGNC
XKR4	114786	genome.wustl.edu	37	8	56436429	56436429	+	Silent	SNP	C	C	T			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	8	56436429	56436429	C	T	SNP	XKR4	ENST00000327381	human	ensembl	70_37	+1	known	silent	c.1596	p.A532	0.000	NULL	pfam_Transport_prot_XK	-	no_errors	XKR4	HGNC
ZNF138	7697	genome.wustl.edu	37	7	64292514	64292514	+	Missense_Mutation	SNP	G	G	C			TCGA-C5-A1BE-01B-11D-A13W-08	TCGA-C5-A1BE-10A-01D-A13W-08	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8560d2cc-c862-4f4a-8b06-c2f4bcd6a0ac	7d05a76b-1885-47d5-a8b3-08b2a1b401b4	7	64292514	64292514	G	C	SNP	ZNF138	ENST00000359735	human	ensembl	70_37	+1	known	missense	c.723	p.Q241H	0.266	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF138	HGNC
