Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source
ADAMTS19	171019	genome.wustl.edu	37	5	128957956	128957956	+	Missense_Mutation	SNP	C	C	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	5	128957956	128957956	C	T	SNP	ADAMTS19	ENST00000274487	human	ensembl	70_37	+1	known	missense	c.1667	p.S556F	1.000	NULL	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_PLAC,pfam_Pept_M10_metallopeptidase,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS19	HGNC
ADC	0	genome.wustl.edu	37	1	33567488	33567488	+	Missense_Mutation	SNP	G	G	A			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	1	33567488	33567488	G	A	SNP	ADC	ENST00000358680	human	ensembl	70_37	+1	known	missense	c.610	p.V204M	0.002	NULL	pfam_De-COase2_N,superfamily_Ala_racemase/Decarboxylase_C,prints_Orn_de-COase	-	no_errors	ADC	HGNC
ALPK3	57538	genome.wustl.edu	37	15	85402524	85402524	+	Missense_Mutation	SNP	G	G	A			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	15	85402524	85402524	G	A	SNP	ALPK3	ENST00000258888	human	ensembl	70_37	+1	known	missense	c.4474	p.G1492S	1.000	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_MHCK_EF2_kinase,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase,pfscan_Ig-like	-	no_errors	ALPK3	HGNC
ANXA2	302	genome.wustl.edu	37	15	60674634	60674634	+	Missense_Mutation	SNP	T	T	C			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	15	60674634	60674634	T	C	SNP	ANXA2	ENST00000332680	human	ensembl	70_37	-1	known	missense	c.109	p.T37A	0.948	prints_AnnexinII	pfam_Annexin_repeat,superfamily_Annexin,smart_Annexin_repeat,prints_Annexin,prints_AnnexinII,prints_AnnexinV	-	no_errors	ANXA2	HGNC
APOH	350	genome.wustl.edu	37	17	64210633	64210633	+	Missense_Mutation	SNP	C	C	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	17	64210633	64210633	C	T	SNP	APOH	ENST00000205948	human	ensembl	70_37	-1	known	missense	c.920	p.C307Y	0.992	pfam_Sushi_2,superfamily_Complement_control_module	pfam_Sushi_SCR_CCP,pfam_Sushi_2,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	APOH	HGNC
ASB17	127247	genome.wustl.edu	37	1	76397739	76397739	+	Missense_Mutation	SNP	G	G	A			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	1	76397739	76397739	G	A	SNP	ASB17	ENST00000284142	human	ensembl	70_37	-1	known	missense	c.238	p.R80C	0.947	superfamily_Ankyrin_rpt-contain_dom	pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_SOCS_C,pfscan_SOCS_C	-	no_errors	ASB17	HGNC
ATP10B	23120	genome.wustl.edu	37	5	160047923	160047923	+	Missense_Mutation	SNP	G	G	A			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	5	160047923	160047923	G	A	SNP	ATP10B	ENST00000327245	human	ensembl	70_37	-1	known	missense	c.1847	p.T616M	0.000	superfamily_HAD-like_dom	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_Dehalogen-like_hydro,superfamily_HAD-like_dom,superfamily_ATPase_cation_domN,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_Plipid-transl,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP10B	HGNC
BAI2	576	genome.wustl.edu	37	1	32203034	32203034	+	Missense_Mutation	SNP	C	C	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	1	32203034	32203034	C	T	SNP	BAI2	ENST00000373658	human	ensembl	70_37	-1	known	missense	c.2975	p.S992N	1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI2	HGNC
BARX2	8538	genome.wustl.edu	37	11	129312620	129312620	+	Nonsense_Mutation	SNP	C	C	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	11	129312620	129312620	C	T	SNP	BARX2	ENST00000531946	human	ensembl	70_37	+1	putative	nonsense	c.13	p.R5*	0.000	NULL	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,prints_HTH_motif	-	no_errors	BARX2	HGNC
C2CD3	26005	genome.wustl.edu	37	11	73849953	73849953	+	Missense_Mutation	SNP	C	C	A			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	11	73849953	73849953	C	A	SNP	C2CD3	ENST00000334126	human	ensembl	70_37	-1	known	missense	c.767	p.G256V	0.999	NULL	pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep	-	no_errors	C2CD3	HGNC
CACNA1I	8911	genome.wustl.edu	37	22	40037064	40037064	+	Missense_Mutation	SNP	T	T	G			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	22	40037064	40037064	T	G	SNP	CACNA1I	ENST00000336649	human	ensembl	70_37	+1	known	missense	c.933	p.N311K	0.921	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_VDCCAlpha1	-	no_errors	CACNA1I	HGNC
CACNB4	785	genome.wustl.edu	37	2	152954869	152954869	+	Missense_Mutation	SNP	G	G	A			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	2	152954869	152954869	G	A	SNP	CACNB4	ENST00000339254	human	ensembl	70_37	-1	known	missense	c.122	p.T41I	1.000	NULL	pfam_Guanylate_kin,pfam_VDCC_L_bsu,superfamily_SH3_domain,smart_Guanylate_kin/L-typ_Ca_channel,pfscan_SH3_domain,prints_VDCC_L_bsu	-	no_errors	CACNB4	HGNC
CDC16	8881	genome.wustl.edu	37	13	115012591	115012591	+	RNA	DEL	T	T	-			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	13	115012591	115012591	T	-	DEL	CDC16	ENST00000494581	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	CDC16	HGNC
CMC4	100272147	genome.wustl.edu	37	X	154290189	154290189	+	Silent	SNP	T	T	G			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	X	154290189	154290189	T	G	SNP	CMC4	ENST00000369479	human	ensembl	70_37	-1	known	silent	c.136	p.R46	1.000	pfam_MTCP1,superfamily_MTCP1	pfam_MTCP1,superfamily_MTCP1	-	no_errors	CMC4	HGNC
CTNNA2	1496	genome.wustl.edu	37	2	80831287	80831287	+	Missense_Mutation	SNP	C	C	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	2	80831287	80831287	C	T	SNP	CTNNA2	ENST00000361291	human	ensembl	70_37	+1	known	missense	c.2380	p.R794C	1.000	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Vinculin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA2	HGNC
DACT1	51339	genome.wustl.edu	37	14	59112032	59112032	+	Missense_Mutation	SNP	G	G	A			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	14	59112032	59112032	G	A	SNP	DACT1	ENST00000335867	human	ensembl	70_37	+1	known	missense	c.691	p.A231T	0.142	NULL	NULL	-	no_errors	DACT1	HGNC
DNAH11	8701	genome.wustl.edu	37	7	21639564	21639564	+	Missense_Mutation	SNP	T	T	C			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	7	21639564	21639564	T	C	SNP	DNAH11	ENST00000328843	human	ensembl	70_37	+1	known	missense	c.2827	p.F943L	0.826	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,smart_AAA+_ATPase	-	no_errors	DNAH11	HGNC
DPYSL5	56896	genome.wustl.edu	37	2	27165488	27165488	+	Missense_Mutation	SNP	T	T	C			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	2	27165488	27165488	T	C	SNP	DPYSL5	ENST00000288699	human	ensembl	70_37	+1	known	missense	c.1310	p.L437P	1.000	superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	-	no_errors	DPYSL5	HGNC
ENSG00000225411	0	genome.wustl.edu	37	9	68400387	68400387	+	RNA	DEL	C	C	-			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	9	68400387	68400387	C	-	DEL	ENSG00000225411	ENST00000417843	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.103	-	-	-	no_errors	RP11-764K9.1	Clone_based_vega_gene
FLNC	2318	genome.wustl.edu	37	7	128494890	128494890	+	Silent	SNP	T	T	C			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	7	128494890	128494890	T	C	SNP	FLNC	ENST00000325888	human	ensembl	70_37	+1	known	silent	c.7059	p.G2353	0.270	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNC	HGNC
GOPC	57120	genome.wustl.edu	37	6	117888189	117888189	+	Silent	SNP	C	C	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	6	117888189	117888189	C	T	SNP	GOPC	ENST00000368498	human	ensembl	70_37	-1	known	silent	c.1086	p.E362	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	GOPC	HGNC
GPR56	9289	genome.wustl.edu	37	16	57689404	57689406	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	16	57689404	57689406	CTC	-	DEL	GPR56	ENST00000379696	human	ensembl	70_37	+1	known	in_frame_del	c.862_864	p.L290in_frame_del	0.976:0.981:0.964	NULL	pfam_GPCR_2_secretin-like,pfam_GPS_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_orphan_rcpt_GPR56,prints_GPCR_2_secretin-like	-	no_errors	GPR56	HGNC
HAUS5	23354	genome.wustl.edu	37	19	36103778	36103778	+	Missense_Mutation	SNP	G	G	A			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	19	36103778	36103778	G	A	SNP	HAUS5	ENST00000203166	human	ensembl	70_37	+1	known	missense	c.82	p.E28K	0.999	NULL	NULL	-	no_errors	HAUS5	HGNC
HLA-DRB5	3127	genome.wustl.edu	37	6	32487265	32487265	+	Missense_Mutation	SNP	C	C	G			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	6	32487265	32487265	C	G	SNP	HLA-DRB5	ENST00000374975	human	ensembl	70_37	-1	known	missense	c.534	p.Q178H	0.000	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like	pfam_MHC_II_b_N,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_b_N,smart_Ig_C1-set,pfscan_Ig-like	-	no_errors	HLA-DRB5	HGNC
HRC	3270	genome.wustl.edu	37	19	49657003	49657003	+	Missense_Mutation	SNP	C	C	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	19	49657003	49657003	C	T	SNP	HRC	ENST00000252825	human	ensembl	70_37	-1	known	missense	c.1492	p.D498N	1.000	NULL	pfam_Hist_rich_Ca-bd	-	no_errors	HRC	HGNC
HSPA2	3306	genome.wustl.edu	37	14	65008081	65008081	+	Missense_Mutation	SNP	C	C	A			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	14	65008081	65008081	C	A	SNP	HSPA2	ENST00000247207	human	ensembl	70_37	+1	known	missense	c.514	p.R172S	1.000	pfam_Hsp_70_fam,pfam_MreB_Mrl	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA2	HGNC
IKBKE	9641	genome.wustl.edu	37	1	206651130	206651130	+	Missense_Mutation	SNP	C	C	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	1	206651130	206651130	C	T	SNP	IKBKE	ENST00000367120	human	ensembl	70_37	+1	known	missense	c.740	p.A247V	0.978	smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	IKBKE	HGNC
IPO9	55705	genome.wustl.edu	37	1	201839837	201839837	+	Missense_Mutation	SNP	C	C	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	1	201839837	201839837	C	T	SNP	IPO9	ENST00000361565	human	ensembl	70_37	+1	known	missense	c.2260	p.R754C	1.000	superfamily_ARM-type_fold	pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	IPO9	HGNC
EFCAB14	9813	genome.wustl.edu	37	1	47144274	47144274	+	Silent	SNP	G	G	A			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	1	47144274	47144274	G	A	SNP	KIAA0494	ENST00000371933	human	ensembl	70_37	-1	known	silent	c.1347	p.D449	0.002	pfscan_EF_HAND_2	pfscan_EF_HAND_2	-	no_errors	KIAA0494	HGNC
KRAS	3845	genome.wustl.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	C	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	12	25398284	25398284	C	T	SNP	KRAS	ENST00000256078	human	ensembl	70_37	-1	known	missense	c.35	p.G12D	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	KRAS	HGNC
LACTBL1	646262	genome.wustl.edu	37	1	23285272	23285272	+	Silent	SNP	G	G	A			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	1	23285272	23285272	G	A	SNP	LACTBL1	ENST00000426928	human	ensembl	70_37	-1	putative	silent	c.459	p.A153	0.000	pfam_Beta-lactam-related,superfamily_Beta-lactam/transpept-like	pfam_Beta-lactam-related,superfamily_Beta-lactam/transpept-like	-	no_errors	LACTBL1	HGNC
LMAN1	3998	genome.wustl.edu	37	18	57000397	57000397	+	Missense_Mutation	SNP	G	G	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	18	57000397	57000397	G	T	SNP	LMAN1	ENST00000251047	human	ensembl	70_37	-1	known	missense	c.1300	p.Q434K	1.000	NULL	pfam_Lectin_leg,superfamily_ConA-like_lec_gl_sf,superfamily_HMG_superfamily	-	no_errors	LMAN1	HGNC
LOC84856	84856	genome.wustl.edu	37	10	42972815	42972815	+	RNA	SNP	C	C	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	10	42972815	42972815	C	T	SNP	LOC84856	ENST00000332123	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.023	-	-	-	no_errors	RP11-178A10.1	Clone_based_vega_gene
LOR	4014	genome.wustl.edu	37	1	153233506	153233506	+	Silent	SNP	C	C	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	1	153233506	153233506	C	T	SNP	LOR	ENST00000368742	human	ensembl	70_37	+1	known	silent	c.81	p.G27	0.000	NULL	NULL	-	no_errors	LOR	HGNC
LRBA	987	genome.wustl.edu	37	4	151818937	151818937	+	Missense_Mutation	SNP	G	G	C			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	4	151818937	151818937	G	C	SNP	LRBA	ENST00000357115	human	ensembl	70_37	-1	known	missense	c.1958	p.S653C	1.000	superfamily_ARM-type_fold	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom	-	no_errors	LRBA	HGNC
LRIF1	55791	genome.wustl.edu	37	1	111490913	111490913	+	Missense_Mutation	SNP	C	C	G			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	1	111490913	111490913	C	G	SNP	LRIF1	ENST00000369763	human	ensembl	70_37	-1	known	missense	c.1978	p.V660L	0.223	NULL	NULL	-	no_errors	LRIF1	HGNC
MAGEH1	28986	genome.wustl.edu	37	X	55479014	55479014	+	Silent	SNP	G	G	A			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	X	55479014	55479014	G	A	SNP	MAGEH1	ENST00000342972	human	ensembl	70_37	+1	known	silent	c.207	p.S69	0.006	pfam_MAGE	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEH1	HGNC
MCF2L2	23101	genome.wustl.edu	37	3	183041027	183041027	+	Missense_Mutation	SNP	C	C	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	3	183041027	183041027	C	T	SNP	MCF2L2	ENST00000328913	human	ensembl	70_37	-1	known	missense	c.599	p.R200H	1.000	NULL	pfam_DH-domain,superfamily_DH-domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	MCF2L2	HGNC
MIR512-1	574458	genome.wustl.edu	37	19	54170018	54170018	+	RNA	SNP	G	G	A			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	19	54170018	54170018	G	A	SNP	MIR512-1	ENST00000384913	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.182	-	-	-	no_errors	MIR512-1	HGNC
MS4A3	932	genome.wustl.edu	37	11	59828645	59828645	+	Silent	SNP	C	C	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	11	59828645	59828645	C	T	SNP	MS4A3	ENST00000278865	human	ensembl	70_37	+1	known	silent	c.12	p.H4	0.000	NULL	pfam_CD20-like	-	no_errors	MS4A3	HGNC
NBPF10	100132406	genome.wustl.edu	37	1	145323656	145323656	+	Missense_Mutation	SNP	A	A	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	1	145323656	145323656	A	T	SNP	NBPF10	ENST00000342960	human	ensembl	70_37	+1	known	missense	c.3493	p.I1165F	0.007	NULL	pfam_NBPF_dom	-	no_errors	NBPF10	HGNC
NBR2	10230	genome.wustl.edu	37	17	41296946	41296946	+	RNA	SNP	C	C	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	17	41296946	41296946	C	T	SNP	NBR2	ENST00000460115	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.011	-	-	-	no_errors	NBR2	HGNC
NELL1	4745	genome.wustl.edu	37	11	20691274	20691274	+	Missense_Mutation	SNP	C	C	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	11	20691274	20691274	C	T	SNP	NELL1	ENST00000357134	human	ensembl	70_37	+1	known	missense	c.5	p.P2L	0.356	NULL	pfam_EGF-like_Ca-bd,pfam_VWF_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_VWC_out,smart_VWF_C,smart_EGF-like_Ca-bd,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_VWF_C	-	no_errors	NELL1	HGNC
NSMAF	8439	genome.wustl.edu	37	8	59520362	59520362	+	Missense_Mutation	SNP	C	C	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	8	59520362	59520362	C	T	SNP	NSMAF	ENST00000427130	human	ensembl	70_37	-1	known	missense	c.818	p.R273H	1.000	pfam_GRAM,smart_GRAM	pfam_BEACH_dom,pfam_WD40_repeat,pfam_GRAM,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,smart_GRAM,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NSMAF	HGNC
OR4K1	79544	genome.wustl.edu	37	14	20404680	20404680	+	Silent	SNP	C	C	A			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	14	20404680	20404680	C	A	SNP	OR4K1	ENST00000285600	human	ensembl	70_37	+1	known	silent	c.855	p.I285	0.994	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4K1	HGNC
OSBPL1A	114876	genome.wustl.edu	37	18	21750344	21750344	+	Missense_Mutation	SNP	C	C	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	18	21750344	21750344	C	T	SNP	OSBPL1A	ENST00000319481	human	ensembl	70_37	-1	known	missense	c.2365	p.A789T	0.997	pfam_Oxysterol-bd	pfam_Oxysterol-bd,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Pleckstrin_homology,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,prints_Ankyrin_rpt	-	no_errors	OSBPL1A	HGNC
PDXK	8566	genome.wustl.edu	37	21	45176055	45176055	+	RNA	SNP	C	C	G			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	21	45176055	45176055	C	G	SNP	PDXK	ENST00000343528	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.236	-	-	-	no_errors	PDXK	HGNC
POLR1A	25885	genome.wustl.edu	37	2	86315726	86315727	+	Frame_Shift_Del	DEL	CA	CA	-			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	2	86315726	86315727	CA	-	DEL	POLR1A	ENST00000263857	human	ensembl	70_37	-1	known	frame_shift_del	c.693_692	p.V231fs	0.981:0.984	pfam_RNA_pol_Rpb1_1	pfam_RNA_pol_Rpb1_5,pfam_RNA_pol_asu,pfam_RNA_pol_Rpb1_3,pfam_RNA_pol_Rpb1_4,pfam_RNA_pol_Rpb1_1,smart_RNA_pol_N	-	no_errors	POLR1A	HGNC
RASGRF2	5924	genome.wustl.edu	37	5	80497154	80497154	+	Silent	SNP	C	C	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	5	80497154	80497154	C	T	SNP	RASGRF2	ENST00000265080	human	ensembl	70_37	+1	known	silent	c.2799	p.F933	1.000	pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_Ras_GEF_dom,superfamily_DH-domain,smart_Pleckstrin_homology,smart_DH-domain,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_DH-domain,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RASGRF2	HGNC
RHOB	388	genome.wustl.edu	37	2	20647696	20647697	+	Frame_Shift_Ins	INS	-	-	TG			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	2	20647696	20647697	-	TG	INS	RHOB	ENST00000272233	human	ensembl	70_37	+1	known	frame_shift_ins	c.470_471	p.E158fs	1.000:1.000	pfam_Small_GTPase,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RHOB	HGNC
RHOB	388	genome.wustl.edu	37	2	20647697	20647697	+	Silent	SNP	C	C	A			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	2	20647697	20647697	C	A	SNP	RHOB	ENST00000272233	human	ensembl	70_37	+1	known	silent	c.471	p.L157	1.000	pfam_Small_GTPase,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RHOB	HGNC
RIN2	54453	genome.wustl.edu	37	20	19977442	19977442	+	Missense_Mutation	SNP	C	C	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	20	19977442	19977442	C	T	SNP	RIN2	ENST00000255006	human	ensembl	70_37	+1	known	missense	c.2467	p.R823W	0.779	NULL	pfam_VPS9,pfam_Ras-assoc,smart_VPS9_subgr,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_SH2,pfscan_VPS9	-	no_errors	RIN2	HGNC
RNF128	79589	genome.wustl.edu	37	X	105937389	105937389	+	Missense_Mutation	SNP	G	G	A			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	X	105937389	105937389	G	A	SNP	RNF128	ENST00000324342	human	ensembl	70_37	+1	known	missense	c.157	p.V53I	0.981	NULL	pfam_Protease-assoc_domain,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF128	HGNC
RPA1	6117	genome.wustl.edu	37	17	1798346	1798346	+	Missense_Mutation	SNP	G	G	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	17	1798346	1798346	G	T	SNP	RPA1	ENST00000254719	human	ensembl	70_37	+1	known	missense	c.1703	p.R568L	0.874	pfam_Rep_factor-A_C,superfamily_NA-bd_OB-fold-like,tigrfam_Rep_factor_Rpa1	pfam_Rep_factor-A_C,pfam_Rep_factor-A_N,pfam_NA-bd_OB_tRNA-helicase,superfamily_NA-bd_OB-fold-like,tigrfam_Rep_factor_Rpa1	-	no_errors	RPA1	HGNC
RPL3	6122	genome.wustl.edu	37	22	39708974	39708974	+	Missense_Mutation	SNP	C	C	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	22	39708974	39708974	C	T	SNP	RPL3	ENST00000216146	human	ensembl	70_37	-1	known	missense	c.1183	p.D395N	1.000	NULL	pfam_Ribosomal_L3,superfamily_Transl_elong_init/rib_B-barrel	-	no_errors	RPL3	HGNC
SBK2	646643	genome.wustl.edu	37	19	56042597	56042597	+	Silent	SNP	G	G	A			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	19	56042597	56042597	G	A	SNP	SBK2	ENST00000344158	human	ensembl	70_37	-1	known	silent	c.369	p.Y123	0.995	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	SBK2	HGNC
SDHC	6391	genome.wustl.edu	37	1	161326591	161326591	+	Silent	SNP	C	C	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	1	161326591	161326591	C	T	SNP	SDHC	ENST00000367975	human	ensembl	70_37	+1	known	silent	c.366	p.F122	0.903	pfam_Succ_DH_Fumarate_Rdtase_TM-su,pirsf_Succ_DH_cytb560,tigrfam_Succ_DH_cytb556	pfam_Succ_DH_Fumarate_Rdtase_TM-su,pirsf_Succ_DH_cytb560,tigrfam_Succ_DH_cytb556	-	no_errors	SDHC	HGNC
SEC16B	89866	genome.wustl.edu	37	1	177906448	177906448	+	Missense_Mutation	SNP	G	G	A			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	1	177906448	177906448	G	A	SNP	SEC16B	ENST00000308284	human	ensembl	70_37	-1	known	missense	c.2404	p.P802S	0.169	NULL	NULL	-	no_errors	SEC16B	HGNC
SIGLEC10	89790	genome.wustl.edu	37	19	51918459	51918459	+	Missense_Mutation	SNP	C	C	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	19	51918459	51918459	C	T	SNP	SIGLEC10	ENST00000339313	human	ensembl	70_37	-1	known	missense	c.1306	p.V436I	0.000	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	SIGLEC10	HGNC
SPAG6	9576	genome.wustl.edu	37	10	22634734	22634734	+	Silent	SNP	G	G	A			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	10	22634734	22634734	G	A	SNP	SPAG6	ENST00000376603	human	ensembl	70_37	+1	known	silent	c.108	p.T36	0.093	NULL	pfam_Armadillo,pfam_HEAT,pfam_26S_Psome_nonATP_su5,superfamily_ARM-type_fold,smart_Armadillo	-	no_errors	SPAG6	HGNC
SPTA1	6708	genome.wustl.edu	37	1	158641935	158641935	+	Missense_Mutation	SNP	G	G	A			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	1	158641935	158641935	G	A	SNP	SPTA1	ENST00000368148	human	ensembl	70_37	-1	known	missense	c.1402	p.R468C	0.993	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,pfscan_EF_HAND_2,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SPTA1	HGNC
TAS2R64P	338412	genome.wustl.edu	37	12	11230243	11230243	+	RNA	SNP	C	C	A			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	12	11230243	11230243	C	A	SNP	TAS2R64P	ENST00000534866	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.146	-	-	-	no_errors	TAS2R64P	HGNC
TBX20	57057	genome.wustl.edu	37	7	35293127	35293127	+	Silent	SNP	C	C	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	7	35293127	35293127	C	T	SNP	TBX20	ENST00000408931	human	ensembl	70_37	-1	known	silent	c.105	p.T35	0.796	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX20	HGNC
TENM2	57451	genome.wustl.edu	37	5	167674062	167674062	+	Missense_Mutation	SNP	T	T	C			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	5	167674062	167674062	T	C	SNP	TENM2	ENST00000518659	human	ensembl	70_37	+1	known	missense	c.6118	p.F2040L	1.000	superfamily_ConA-like_lec_gl_sf	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Quino_amine_DH_bsu,superfamily_ConA-like_lec_gl_sf,superfamily_Cytokine_IL1-like,smart_EG-like_dom,smart_EGF-like_Ca-bd,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM2	HGNC
THOC2	57187	genome.wustl.edu	37	X	122765673	122765673	+	Missense_Mutation	SNP	A	A	C			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	X	122765673	122765673	A	C	SNP	THOC2	ENST00000245838	human	ensembl	70_37	-1	known	missense	c.2347	p.F783V	1.000	NULL	pfam_THO_THOC2_C,pfam_THO_THOC2_N	-	no_errors	THOC2	HGNC
TMEM25	84866	genome.wustl.edu	37	11	118406231	118406231	+	Missense_Mutation	SNP	C	C	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	11	118406231	118406231	C	T	SNP	TMEM25	ENST00000533102	human	ensembl	70_37	+1	known	missense	c.1033	p.L345F	0.000	NULL	pfam_CD80_C2-set,pfscan_Ig-like	-	no_errors	TMEM25	HGNC
TNPO3	23534	genome.wustl.edu	37	7	128612587	128612587	+	Missense_Mutation	SNP	G	G	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	7	128612587	128612587	G	T	SNP	TNPO3	ENST00000393245	human	ensembl	70_37	-1	known	missense	c.2425	p.P809T	1.000	superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,superfamily_ARM-type_fold	-	no_errors	TNPO3	HGNC
TRIO	7204	genome.wustl.edu	37	5	14477003	14477003	+	Missense_Mutation	SNP	C	C	G			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	5	14477003	14477003	C	G	SNP	TRIO	ENST00000344204	human	ensembl	70_37	+1	known	missense	c.6084	p.D2028E	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_Prot_kinase_cat_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,superfamily_Capsid/spike_ssDNA_virus,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,pfscan_DH-domain	-	no_errors	TRIO	HGNC
TTN	7273	genome.wustl.edu	37	2	179637917	179637917	+	Silent	SNP	G	G	A			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	2	179637917	179637917	G	A	SNP	TTN	ENST00000342992	human	ensembl	70_37	-1	known	silent	c.7774	p.L2592	0.208	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC
TUBBP5	643224	genome.wustl.edu	37	9	141071339	141071339	+	RNA	SNP	C	C	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	9	141071339	141071339	C	T	SNP	TUBBP5	ENST00000290377	human	ensembl	70_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TUBBP5	HGNC
TUBGCP6	85378	genome.wustl.edu	37	22	50664366	50664366	+	Missense_Mutation	SNP	G	G	A			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	22	50664366	50664366	G	A	SNP	TUBGCP6	ENST00000248846	human	ensembl	70_37	-1	known	missense	c.1840	p.L614F	1.000	pfam_Spc97_Spc98	pfam_Spc97_Spc98	-	no_errors	TUBGCP6	HGNC
TXNDC11	51061	genome.wustl.edu	37	16	11773493	11773493	+	Missense_Mutation	SNP	G	G	A			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	16	11773493	11773493	G	A	SNP	TXNDC11	ENST00000356957	human	ensembl	70_37	-1	known	missense	c.2516	p.A839V	0.159	NULL	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	TXNDC11	HGNC
UROC1	131669	genome.wustl.edu	37	3	126208147	126208147	+	Missense_Mutation	SNP	G	G	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	3	126208147	126208147	G	T	SNP	UROC1	ENST00000290868	human	ensembl	70_37	-1	known	missense	c.1680	p.N560K	1.000	pfam_Urocanase_dom,superfamily_Urocanase_dom,pirsf_Urocanase	pfam_Urocanase_dom,superfamily_Urocanase_dom,pirsf_Urocanase	-	no_errors	UROC1	HGNC
USP40	55230	genome.wustl.edu	37	2	234429739	234429740	+	In_Frame_Ins	INS	-	-	TTC			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	2	234429739	234429740	-	TTC	INS	USP40	ENST00000450966	human	ensembl	70_37	-1	known	in_frame_ins	c.2256_2255	p.753in_frame_insK	0.067:0.070	NULL	pfam_Peptidase_C19,pfscan_Peptidase_C19	-	no_errors	USP40	HGNC
VWF	7450	genome.wustl.edu	37	12	6120958	6120958	+	Silent	SNP	G	G	A			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	12	6120958	6120958	G	A	SNP	VWF	ENST00000261405	human	ensembl	70_37	-1	known	silent	c.5667	p.P1889	0.981	pirsf_VWF	pfam_VWF_type-D,pfam_VWF_A,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_VWF_A,smart_Cys_knot_C,pirsf_VWF,pfscan_Cys_knot_C,pfscan_VWF_A,pfscan_VWF_C	-	no_errors	VWF	HGNC
XKRX	402415	genome.wustl.edu	37	X	100169813	100169813	+	Silent	SNP	G	G	A			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	X	100169813	100169813	G	A	SNP	XKRX	ENST00000328526	human	ensembl	70_37	-1	known	silent	c.903	p.F301	1.000	pfam_Transport_prot_XK	pfam_Transport_prot_XK	-	no_errors	XKRX	HGNC
ZNF365	22891	genome.wustl.edu	37	10	64160273	64160273	+	RNA	SNP	C	C	T			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	10	64160273	64160273	C	T	SNP	ZNF365	ENST00000466727	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.059	-	-	-	no_errors	ZNF365	HGNC
ZNF75A	7627	genome.wustl.edu	37	16	3361824	3361824	+	RNA	SNP	G	G	A			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	16	3361824	3361824	G	A	SNP	ZNF75A	ENST00000498240	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZNF75A	HGNC
ZW10	9183	genome.wustl.edu	37	11	113618265	113618265	+	Missense_Mutation	SNP	A	A	C			TCGA-FU-A3EO-01A-11D-A20U-09	TCGA-FU-A3EO-11A-13D-A20U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c2900e30-5120-4349-8520-13bfab27dfc7	400d56d0-c2e8-4ab4-b22c-1b39bb7cdc61	11	113618265	113618265	A	C	SNP	ZW10	ENST00000200135	human	ensembl	70_37	-1	known	missense	c.1260	p.H420Q	1.000	pfam_RZZ-complex_Zw10	pfam_RZZ-complex_Zw10	-	no_errors	ZW10	HGNC
