Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source
ACSM2B	348158	genome.wustl.edu	37	16	20559410	20559410	+	Nonsense_Mutation	SNP	G	G	A			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	16	20559410	20559410	G	A	SNP	ACSM2B	ENST00000329697	human	ensembl	70_37	-1	known	nonsense	c.1072	p.R358*	0.963	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSM2B	HGNC
AKT1S1	84335	genome.wustl.edu	37	19	50376308	50376308	+	Missense_Mutation	SNP	G	G	T			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	19	50376308	50376308	G	T	SNP	AKT1S1	ENST00000344175	human	ensembl	70_37	-1	known	missense	c.245	p.P82Q	0.982	NULL	NULL	-	no_errors	AKT1S1	HGNC
ALMS1P	200420	genome.wustl.edu	37	2	73900988	73900988	+	RNA	SNP	C	C	T			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	2	73900988	73900988	C	T	SNP	ALMS1P	ENST00000450720	human	ensembl	70_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ALMS1P	HGNC
ARID1A	8289	genome.wustl.edu	37	1	27057661	27057661	+	Nonsense_Mutation	SNP	C	C	T			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	1	27057661	27057661	C	T	SNP	ARID1A	ENST00000324856	human	ensembl	70_37	+1	known	nonsense	c.1369	p.Q457*	1.000	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC
ARMC6	93436	genome.wustl.edu	37	19	19166718	19166718	+	Missense_Mutation	SNP	C	C	T			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	19	19166718	19166718	C	T	SNP	ARMC6	ENST00000392336	human	ensembl	70_37	+1	known	missense	c.1274	p.P425L	0.993	superfamily_ARM-type_fold,smart_Armadillo	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	ARMC6	HGNC
BCORL1	63035	genome.wustl.edu	37	X	129148350	129148350	+	Silent	SNP	C	C	T			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	X	129148350	129148350	C	T	SNP	BCORL1	ENST00000303743	human	ensembl	70_37	+1	known	silent	c.1602	p.S534	0.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	BCORL1	HGNC
COL19A1	1310	genome.wustl.edu	37	6	70873240	70873240	+	Missense_Mutation	SNP	A	A	C			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	6	70873240	70873240	A	C	SNP	COL19A1	ENST00000322773	human	ensembl	70_37	+1	known	missense	c.2352	p.L784F	0.000	pfam_Collagen	pfam_Collagen,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	-	no_errors	COL19A1	HGNC
CYP11A1	1583	genome.wustl.edu	37	15	74631051	74631051	+	Missense_Mutation	SNP	G	G	A			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	15	74631051	74631051	G	A	SNP	CYP11A1	ENST00000268053	human	ensembl	70_37	-1	known	missense	c.1295	p.P432L	0.997	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_mitochondrial,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP11A1	HGNC
CYP2F1	1572	genome.wustl.edu	37	19	41630665	41630665	+	Missense_Mutation	SNP	C	C	T			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	19	41630665	41630665	C	T	SNP	CYP2F1	ENST00000331105	human	ensembl	70_37	+1	known	missense	c.1006	p.R336W	0.951	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_CYP2_fam,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP2F1	HGNC
DHX9	1660	genome.wustl.edu	37	1	182845266	182845266	+	Missense_Mutation	SNP	C	C	A			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	1	182845266	182845266	C	A	SNP	DHX9	ENST00000367549	human	ensembl	70_37	+1	known	missense	c.1897	p.P633T	1.000	NULL	pfam_Ds-RNA-bd,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DUF1605,pfam_DNA/RNA_helicase_DEAD/DEAH_N,smart_Ds-RNA-bd,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Ds-RNA-bd	-	no_errors	DHX9	HGNC
DNAH12	201625	genome.wustl.edu	37	3	57456170	57456170	+	Missense_Mutation	SNP	C	C	T			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	3	57456170	57456170	C	T	SNP	DNAH12	ENST00000351747	human	ensembl	70_37	-1	known	missense	c.2105	p.R702Q	1.000	pfam_Dynein_heavy_dom-2	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,smart_AAA+_ATPase	-	no_errors	DNAH12	HGNC
DOCK3	1795	genome.wustl.edu	37	3	51265439	51265440	+	Frame_Shift_Del	DEL	TT	TT	-			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	3	51265439	51265440	TT	-	DEL	DOCK3	ENST00000266037	human	ensembl	70_37	+1	known	frame_shift_del	c.1567_1568	p.F523fs	1.000:1.000	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK3	HGNC
ENSG00000201483	0	genome.wustl.edu	37	6	7187819	7187819	+	RNA	SNP	T	T	G			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	6	7187819	7187819	T	G	SNP	ENSG00000201483	ENST00000364613	human	ensembl	70_37	-1	novel	rna	NULL	NULL	0.005	-	-	-	no_errors	Y_RNA	RFAM
ENSG00000211459	0	genome.wustl.edu	37	MT	1572	1572	+	RNA	SNP	A	A	G			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	MT	1572	1572	A	G	SNP	ENSG00000211459	ENST00000389680	human	ensembl	70_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	J01415.23	Clone_based_ensembl_gene
F8	2157	genome.wustl.edu	37	X	154132217	154132218	+	Frame_Shift_Ins	INS	-	-	T			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	X	154132217	154132218	-	T	INS	F8	ENST00000360256	human	ensembl	70_37	-1	known	frame_shift_ins	c.5962_5961	p.E1987fs	0.019:0.005	pfam_Cu-oxidase_2,superfamily_Cupredoxin	pfam_Coagulation_fac_5/8-C_type_dom,pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Galactose-bd-like,superfamily_Cupredoxin,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	F8	HGNC
FBXW7	55294	genome.wustl.edu	37	4	153247366	153247366	+	Missense_Mutation	SNP	C	C	T			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	4	153247366	153247366	C	T	SNP	FBXW7	ENST00000281708	human	ensembl	70_37	-1	known	missense	c.1436	p.R479Q	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	pfam_WD40_repeat,pfam_F-box_dom_cyclin-like,superfamily_WD40_repeat_dom,superfamily_F-box_dom_cyclin-like,smart_F-box_dom_cyclin-like,smart_WD40_repeat,pfscan_F-box_dom_cyclin-like,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW7	HGNC
FLNA	2316	genome.wustl.edu	37	X	153581709	153581709	+	Missense_Mutation	SNP	G	G	A			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	X	153581709	153581709	G	A	SNP	FLNA	ENST00000369850	human	ensembl	70_37	-1	known	missense	c.5977	p.R1993W	0.971	superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNA	HGNC
FSIP2	401024	genome.wustl.edu	37	2	186667594	186667594	+	Missense_Mutation	SNP	G	G	A			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	2	186667594	186667594	G	A	SNP	FSIP2	ENST00000343098	human	ensembl	70_37	+1	known	missense	c.13828	p.E4610K	1.000	NULL	NULL	-	no_errors	FSIP2	HGNC
HCN1	348980	genome.wustl.edu	37	5	45262787	45262787	+	Missense_Mutation	SNP	C	C	T			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	5	45262787	45262787	C	T	SNP	HCN1	ENST00000303230	human	ensembl	70_37	-1	known	missense	c.1909	p.A637T	0.993	NULL	pfam_Ion_trans_N,pfam_cNMP-bd_dom,pfam_Ion_trans_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG	-	no_errors	HCN1	HGNC
HELZ2	85441	genome.wustl.edu	37	20	62192477	62192477	+	Silent	SNP	A	A	C			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	20	62192477	62192477	A	C	SNP	HELZ2	ENST00000467148	human	ensembl	70_37	-1	known	silent	c.7104	p.P2368	0.508	NULL	pfam_RNase_II/R,smart_RNase_II/R	-	no_errors	HELZ2	HGNC
ING1	3621	genome.wustl.edu	37	13	111371896	111371896	+	Nonsense_Mutation	SNP	C	C	T			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	13	111371896	111371896	C	T	SNP	ING1	ENST00000375774	human	ensembl	70_37	+1	known	nonsense	c.886	p.Q296*	1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	ING1	HGNC
KRAS	3845	genome.wustl.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	C	T			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	12	25398284	25398284	C	T	SNP	KRAS	ENST00000256078	human	ensembl	70_37	-1	known	missense	c.35	p.G12D	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	KRAS	HGNC
LOC646278	646278	genome.wustl.edu	37	15	29078470	29078470	+	RNA	SNP	G	G	C			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	15	29078470	29078470	G	C	SNP	LOC646278	ENST00000563144	human	ensembl	70_37	+1	putative	rna	NULL	NULL	0.917	-	-	-	no_errors	RP11-578F21.12	Clone_based_vega_gene
LOC646278	646278	genome.wustl.edu	37	15	29078494	29078494	+	RNA	SNP	T	T	C			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	15	29078494	29078494	T	C	SNP	LOC646278	ENST00000563144	human	ensembl	70_37	+1	putative	rna	NULL	NULL	0.897	-	-	-	no_errors	RP11-578F21.12	Clone_based_vega_gene
LOC646278	646278	genome.wustl.edu	37	15	29078498	29078498	+	RNA	SNP	A	A	T			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	15	29078498	29078498	A	T	SNP	LOC646278	ENST00000563144	human	ensembl	70_37	+1	putative	rna	NULL	NULL	0.899	-	-	-	no_errors	RP11-578F21.12	Clone_based_vega_gene
LOC646278	646278	genome.wustl.edu	37	15	29078501	29078501	+	RNA	SNP	G	G	A			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	15	29078501	29078501	G	A	SNP	LOC646278	ENST00000563144	human	ensembl	70_37	+1	putative	rna	NULL	NULL	0.939	-	-	-	no_errors	RP11-578F21.12	Clone_based_vega_gene
MIR124-2	406908	genome.wustl.edu	37	8	65291792	65291792	+	RNA	SNP	C	C	T			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	8	65291792	65291792	C	T	SNP	MIR124-2	ENST00000385081	human	ensembl	70_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR124-2	HGNC
MIR3122	100422947	genome.wustl.edu	37	1	212251014	212251014	+	RNA	SNP	C	C	T			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	1	212251014	212251014	C	T	SNP	MIR3122	ENST00000577243	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	MIR3122	HGNC
MT-ND5	4540	genome.wustl.edu	37	MT	13843	13843	+	Missense_Mutation	SNP	G	G	A			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	MT	13843	13843	G	A	SNP	MT-ND5	ENST00000361567	human	ensembl	70_37	+1	known	missense	c.1507	p.D503N	NULL	pfam_NADH_DH_su5_C	pfam_NADH_UbQ/plastoQ_OxRdtase,pfam_NADH_DH_su5_C,pfam_NADH_UbQ_OxRdtase_chain5/L_N,tigrfam_NADHpl_OxRdtase_5	-	no_errors	MT-ND5	HGNC
NPC1L1	29881	genome.wustl.edu	37	7	44553224	44553224	+	Missense_Mutation	SNP	G	G	T			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	7	44553224	44553224	G	T	SNP	NPC1L1	ENST00000289547	human	ensembl	70_37	-1	known	missense	c.3902	p.A1301E	0.903	NULL	pfam_Patched,pfscan_SSD	-	no_errors	NPC1L1	HGNC
PARP2	10038	genome.wustl.edu	37	14	20815064	20815064	+	Silent	SNP	C	C	T			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	14	20815064	20815064	C	T	SNP	PARP2	ENST00000250416	human	ensembl	70_37	+1	known	silent	c.355	p.L119	0.990	pfam_WGR_domain,superfamily_WGR_domain,smart_WGR_domain	pfam_Poly(ADP-ribose)pol_cat_dom,pfam_Poly(ADP-ribose)pol_reg_dom,pfam_WGR_domain,superfamily_Poly(ADP-ribose)pol_reg_dom,superfamily_WGR_domain,smart_WGR_domain,pfscan_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_reg_dom	-	no_errors	PARP2	HGNC
PCDHA11	56138	genome.wustl.edu	37	5	140250200	140250200	+	Silent	SNP	G	G	A			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	5	140250200	140250200	G	A	SNP	PCDHA11	ENST00000398640	human	ensembl	70_37	+1	known	silent	c.1512	p.S504	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA11	HGNC
PIK3CA	5290	genome.wustl.edu	37	3	178936095	178936095	+	Missense_Mutation	SNP	A	A	G			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	3	178936095	178936095	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	70_37	+1	known	missense	c.1637	p.Q546R	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC
PLA2G4E	123745	genome.wustl.edu	37	15	42302330	42302330	+	Missense_Mutation	SNP	G	G	C			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	15	42302330	42302330	G	C	SNP	PLA2G4E	ENST00000413860	human	ensembl	70_37	-1	known	missense	c.116	p.A39G	0.000	pfscan_C2_membr_targeting	pfam_LysoPLipase_cat_dom,pfam_C2_Ca-dep,superfamily_Acyl_Trfase/lysoPLipase,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,smart_LysoPLipase_cat_dom,pfscan_C2_membr_targeting,pfscan_LysoPLipase_cat_dom	-	no_errors	PLA2G4E	HGNC
PRPF40B	25766	genome.wustl.edu	37	12	50025307	50025307	+	Missense_Mutation	SNP	G	G	T			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	12	50025307	50025307	G	T	SNP	PRPF40B	ENST00000380281	human	ensembl	70_37	+1	known	missense	c.142	p.A48S	1.000	NULL	pfam_FF_domain,pfam_WW_Rsp5_WWP,superfamily_FF_domain,superfamily_WW_Rsp5_WWP,smart_WW_Rsp5_WWP,smart_FF_domain,pfscan_WW_Rsp5_WWP	-	no_errors	PRPF40B	HGNC
PTPRS	5802	genome.wustl.edu	37	19	5244287	5244287	+	Missense_Mutation	SNP	C	C	T			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	19	5244287	5244287	C	T	SNP	PTPRS	ENST00000372412	human	ensembl	70_37	-1	known	missense	c.1198	p.E400K	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like	-	no_errors	PTPRS	HGNC
RBM27	54439	genome.wustl.edu	37	5	145603092	145603092	+	Splice_Site	SNP	T	T	A			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	5	145603092	145603092	T	A	SNP	RBM27	ENST00000265271	human	ensembl	70_37	+1	known	splice_site	c.303+2	e3+2	0.989	-	-	-	no_errors	RBM27	HGNC
RPS10P7	376693	genome.wustl.edu	37	1	201489718	201489719	+	RNA	INS	-	-	A			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	1	201489718	201489719	-	A	INS	RPS10P7	ENST00000441932	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.051:0.056	-	-	-	no_errors	RPS10P7	HGNC
SCN3B	55800	genome.wustl.edu	37	11	123508894	123508894	+	Missense_Mutation	SNP	G	G	A			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	11	123508894	123508894	G	A	SNP	SCN3B	ENST00000299333	human	ensembl	70_37	-1	known	missense	c.584	p.A195V	1.000	NULL	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,pfscan_Ig-like	-	no_errors	SCN3B	HGNC
SPANXN2	494119	genome.wustl.edu	37	X	142795145	142795145	+	Missense_Mutation	SNP	C	C	A			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	X	142795145	142795145	C	A	SNP	SPANXN2	ENST00000370498	human	ensembl	70_37	-1	known	missense	c.533	p.G178V	0.016	NULL	pfam_SPANX_prot	-	no_errors	SPANXN2	HGNC
SPP1	6696	genome.wustl.edu	37	4	88904020	88904020	+	Missense_Mutation	SNP	T	T	C			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	4	88904020	88904020	T	C	SNP	SPP1	ENST00000395080	human	ensembl	70_37	+1	known	missense	c.917	p.L306S	0.963	pfam_Osteopontin,smart_Osteopontin,prints_Osteopontin	pfam_Osteopontin,smart_Osteopontin,prints_Osteopontin	-	no_errors	SPP1	HGNC
TDRD6	221400	genome.wustl.edu	37	6	46656384	46656384	+	Silent	SNP	G	G	T			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	6	46656384	46656384	G	T	SNP	TDRD6	ENST00000316081	human	ensembl	70_37	+1	known	silent	c.519	p.V173	1.000	NULL	pfam_Tudor,smart_Tudor,pfscan_Tudor	-	no_errors	TDRD6	HGNC
TNRC18	84629	genome.wustl.edu	37	7	5360800	5360800	+	Missense_Mutation	SNP	T	T	C			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	7	5360800	5360800	T	C	SNP	TNRC18	ENST00000399537	human	ensembl	70_37	-1	known	missense	c.6464	p.D2155G	1.000	NULL	pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	-	no_errors	TNRC18	HGNC
TPTEP1	387590	genome.wustl.edu	37	22	17131536	17131537	+	RNA	INS	-	-	CTG			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	22	17131536	17131537	-	CTG	INS	TPTEP1	ENST00000426585	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.999:0.999	-	-	-	no_errors	TPTEP1	HGNC
TTBK1	84630	genome.wustl.edu	37	6	43230717	43230717	+	Missense_Mutation	SNP	G	G	A			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	6	43230717	43230717	G	A	SNP	TTBK1	ENST00000259750	human	ensembl	70_37	+1	known	missense	c.1615	p.D539N	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	TTBK1	HGNC
WIZ	58525	genome.wustl.edu	37	19	15550387	15550387	+	Missense_Mutation	SNP	G	G	A			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	19	15550387	15550387	G	A	SNP	WIZ	ENST00000389282	human	ensembl	70_37	-1	known	missense	c.1274	p.A425V	0.865	smart_Znf_C2H2-like	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	WIZ	HGNC
ZDHHC11B	653082	genome.wustl.edu	37	5	766931	766931	+	Missense_Mutation	SNP	G	G	A			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	5	766931	766931	G	A	SNP	ZDHHC11B	ENST00000382776	human	ensembl	70_37	-1	known	missense	c.104	p.S35L	0.981	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC11B	HGNC
ZFHX2	85446	genome.wustl.edu	37	14	23994585	23994585	+	Silent	SNP	G	G	A			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	14	23994585	23994585	G	A	SNP	ZFHX2	ENST00000419474	human	ensembl	70_37	-1	known	silent	c.4566	p.S1522	0.989	superfamily_Adenylate_cyclase-assoc_CAP_N	pfam_Homeodomain,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeodomain,pfscan_Homeodomain,pfscan_Znf_C2H2	-	no_errors	ZFHX2	HGNC
ZNF143	7702	genome.wustl.edu	37	11	9496112	9496112	+	Missense_Mutation	SNP	G	G	T			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	11	9496112	9496112	G	T	SNP	ZNF143	ENST00000396602	human	ensembl	70_37	+1	known	missense	c.305	p.R102L	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF143	HGNC
ZNF681	148213	genome.wustl.edu	37	19	23926852	23926852	+	Silent	SNP	A	A	G			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	19	23926852	23926852	A	G	SNP	ZNF681	ENST00000402377	human	ensembl	70_37	-1	known	silent	c.1500	p.H500	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF681	HGNC
ZNF703	80139	genome.wustl.edu	37	8	37556105	37556105	+	Silent	SNP	G	G	T			TCGA-FU-A57G-01A-11D-A26G-09	TCGA-FU-A57G-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	feec64b6-4789-4b18-8664-27eeefb36a57	8688044c-e6a4-45a0-9266-dde6e8873fc9	8	37556105	37556105	G	T	SNP	ZNF703	ENST00000331569	human	ensembl	70_37	+1	known	silent	c.1686	p.P562	0.925	NULL	pfam_Tscrpt_rep_NocA-like,pfscan_Znf_C2H2	-	no_errors	ZNF703	HGNC
