Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source
ALKBH3	221120	genome.wustl.edu	37	11	43941472	43941472	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	11	43941472	43941472	G	A	SNP	ALKBH3	ENST00000302708	human	ensembl	70_37	+1	known	missense	c.773	p.R258Q	1.000	pfam_Oxoglu/Fe-dep_dioxygenase	pfam_Oxoglu/Fe-dep_dioxygenase	-	no_errors	ALKBH3	HGNC
AMY2B	280	genome.wustl.edu	37	1	104115771	104115771	+	Silent	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	1	104115771	104115771	C	T	SNP	AMY2B	ENST00000361355	human	ensembl	70_37	+1	known	silent	c.402	p.F134	1.000	pfam_Glyco_hydro_13_cat_dom,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom	pfam_Glyco_hydro_13_cat_dom,pfam_A-amylase_b_C,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom,smart_A-amylase_b_C,prints_Alpha_amylase	-	no_errors	AMY2B	HGNC
AP1M1	8907	genome.wustl.edu	37	19	16317185	16317185	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	19	16317185	16317185	C	T	SNP	AP1M1	ENST00000444449	human	ensembl	70_37	+1	known	missense	c.233	p.S78L	0.999	pfam_AP_mu_sigma_su,superfamily_Longin-like_dom,pirsf_Clathrin_mu	pfam_Clathrin_mu_C,pfam_AP_mu_sigma_su,superfamily_Clathrin_mu_C,superfamily_Longin-like_dom,pirsf_Clathrin_mu,pfscan_Clathrin_mu_C,prints_Clathrin_mu	-	no_errors	AP1M1	HGNC
BARHL2	343472	genome.wustl.edu	37	1	91182608	91182608	+	Missense_Mutation	SNP	G	G	C			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	1	91182608	91182608	G	C	SNP	BARHL2	ENST00000370445	human	ensembl	70_37	-1	known	missense	c.145	p.P49A	1.000	NULL	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,prints_Homeobox_metazoa	-	no_errors	BARHL2	HGNC
BTBD11	121551	genome.wustl.edu	37	12	108013935	108013935	+	Silent	SNP	G	G	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	12	108013935	108013935	G	A	SNP	BTBD11	ENST00000280758	human	ensembl	70_37	+1	known	silent	c.2625	p.A875	0.768	NULL	pfam_Ankyrin_rpt,pfam_BTB_POZ,superfamily_BTB/POZ_fold,superfamily_Ankyrin_rpt-contain_dom,superfamily_Histone-fold,smart_Ankyrin_rpt,smart_BTB/POZ-like,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_BTB/POZ-like	-	no_errors	BTBD11	HGNC
C17orf102	400591	genome.wustl.edu	37	17	32906120	32906120	+	Silent	SNP	G	G	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	17	32906120	32906120	G	A	SNP	C17orf102	ENST00000357754	human	ensembl	70_37	-1	known	silent	c.180	p.C60	0.952	NULL	NULL	-	no_errors	C17orf102	HGNC
C5orf56	441108	genome.wustl.edu	37	5	131792780	131792780	+	Silent	SNP	G	G	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	5	131792780	131792780	G	A	SNP	C5orf56	ENST00000378947	human	ensembl	70_37	+1	novel	silent	c.165	p.R55	0.000	NULL	NULL	-	no_errors	C5orf56	HGNC
CCDC178	374864	genome.wustl.edu	37	18	30846981	30846981	+	Silent	SNP	T	T	C			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	18	30846981	30846981	T	C	SNP	CCDC178	ENST00000406524	human	ensembl	70_37	-1	known	silent	c.1308	p.A436	0.652	NULL	NULL	-	no_errors	CCDC178	HGNC
CCDC88B	283234	genome.wustl.edu	37	11	64108934	64108934	+	Silent	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	11	64108934	64108934	C	T	SNP	CCDC88B	ENST00000356786	human	ensembl	70_37	+1	known	silent	c.489	p.L163	1.000	pfam_HOOK	pfam_HOOK	-	no_errors	CCDC88B	HGNC
CDHR2	54825	genome.wustl.edu	37	5	176002413	176002413	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	5	176002413	176002413	G	A	SNP	CDHR2	ENST00000261944	human	ensembl	70_37	+1	known	missense	c.754	p.E252K	0.880	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDHR2	HGNC
CECR2	27443	genome.wustl.edu	37	22	18020198	18020198	+	Nonsense_Mutation	SNP	G	G	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	22	18020198	18020198	G	A	SNP	CECR2	ENST00000400573	human	ensembl	70_37	+1	novel	nonsense	c.1527	p.W509*	1.000	NULL	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	CECR2	HGNC
CLTC	1213	genome.wustl.edu	37	17	57741230	57741230	+	Missense_Mutation	SNP	C	C	G			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	17	57741230	57741230	C	G	SNP	CLTC	ENST00000269122	human	ensembl	70_37	+1	known	missense	c.1396	p.L466V	1.000	superfamily_ARM-type_fold,pirsf_Clathrin_heavy_chain	pfam_Clathrin_H-chain/VPS_repeat,pfam_Clathrin_H-chain_propeller_rpt,pfam_Clathrin_H-chain_linker_core,superfamily_Clathrin_H-chain_propeller_N,superfamily_ARM-type_fold,smart_Clathrin_H-chain/VPS_repeat,pirsf_Clathrin_heavy_chain	-	no_errors	CLTC	HGNC
COL6A2	1292	genome.wustl.edu	37	21	47552113	47552113	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	21	47552113	47552113	G	A	SNP	COL6A2	ENST00000300527	human	ensembl	70_37	+1	known	missense	c.2707	p.E903K	0.713	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A2	HGNC
COLEC11	78989	genome.wustl.edu	37	2	3691678	3691678	+	Silent	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	2	3691678	3691678	C	T	SNP	COLEC11	ENST00000418971	human	ensembl	70_37	+1	known	silent	c.828	p.F276	0.997	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_Collagen,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	COLEC11	HGNC
CTNND1	1500	genome.wustl.edu	37	11	57576858	57576858	+	Silent	SNP	T	T	C			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	11	57576858	57576858	T	C	SNP	CTNND1	ENST00000399050	human	ensembl	70_37	+1	known	silent	c.2355	p.V785	0.994	superfamily_ARM-type_fold	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	CTNND1	HGNC
DNAH1	25981	genome.wustl.edu	37	3	52417483	52417483	+	Nonsense_Mutation	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	3	52417483	52417483	C	T	SNP	DNAH1	ENST00000420323	human	ensembl	70_37	+1	known	nonsense	c.8023	p.Q2675*	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA	-	no_errors	DNAH1	HGNC
DNAJC11	55735	genome.wustl.edu	37	1	6727803	6727804	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	1	6727803	6727804	TC	-	DEL	DNAJC11	ENST00000377577	human	ensembl	70_37	-1	known	frame_shift_del	c.344_343	p.E115fs	1.000:1.000	NULL	pfam_DnaJ-like_C11_C,pfam_DnaJ_N,superfamily_DnaJ_N,smart_DnaJ_N,pfscan_DnaJ_N,prints_Hsp_DnaJ	-	no_errors	DNAJC11	HGNC
DNMT1	1786	genome.wustl.edu	37	19	10273368	10273368	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	19	10273368	10273368	G	A	SNP	DNMT1	ENST00000359526	human	ensembl	70_37	-1	known	missense	c.983	p.S328F	0.064	pirsf_DNA_C5-MeTrfase_1_euk	pirsf_DNA_C5-MeTrfase_1_euk,pfam_C5_MeTfrase,pfam_BAH_dom,pfam_Cytosine_MeTrfase1_RFD,pfam_DMAP1-bd,pfam_Znf_CXXC,smart_BAH_dom,prints_C5_MeTfrase,pfscan_BAH_dom,pfscan_Znf_CXXC	-	no_errors	DNMT1	HGNC
DPP10	57628	genome.wustl.edu	37	2	116257125	116257125	+	Missense_Mutation	SNP	T	T	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	2	116257125	116257125	T	A	SNP	DPP10	ENST00000393147	human	ensembl	70_37	+1	known	missense	c.323	p.I108N	1.000	NULL	pfam_Peptidase_S9B,pfam_Peptidase_S9	-	no_errors	DPP10	HGNC
DPYSL2	1808	genome.wustl.edu	37	8	26441409	26441409	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	8	26441409	26441409	C	T	SNP	DPYSL2	ENST00000311151	human	ensembl	70_37	+1	known	missense	c.223	p.R75C	1.000	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	-	no_errors	DPYSL2	HGNC
DRD3	1814	genome.wustl.edu	37	3	113866346	113866346	+	Silent	SNP	G	G	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	3	113866346	113866346	G	T	SNP	DRD3	ENST00000383673	human	ensembl	70_37	-1	known	silent	c.442	p.R148	0.870	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Dopa_D3_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Dopa_D3_rcpt,prints_GPCR_Rhodpsn,prints_Dopamine_rcpt	-	no_errors	DRD3	HGNC
EEF1A1	1915	genome.wustl.edu	37	6	74228875	74228875	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	6	74228875	74228875	C	T	SNP	EEF1A1	ENST00000309268	human	ensembl	70_37	-1	known	missense	c.401	p.R134Q	1.000	pfam_EF_GTP-bd_dom,tigrfam_Transl_elong_EF1A_euk/arc	pfam_EF_GTP-bd_dom,pfam_Transl_elong_EFTu/EF1A_C,pfam_Transl_elong_EFTu/EF1A_2,superfamily_Transl_elong_EF1A/Init_IF2_C,superfamily_Transl_elong_init/rib_B-barrel,prints_EF_GTP-bd_dom,tigrfam_Transl_elong_EF1A_euk/arc	-	no_errors	EEF1A1	HGNC
EFNA5	1946	genome.wustl.edu	37	5	106716822	106716825	+	RNA	DEL	GAAA	GAAA	-			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	GAAA	GAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	5	106716822	106716825	GAAA	-	DEL	EFNA5	ENST00000510359	human	ensembl	70_37	-1	known	rna	NULL	NULL	1.000:1.000:1.000:1.000	-	-	-	no_errors	EFNA5	HGNC
EHD1	10938	genome.wustl.edu	37	11	64645608	64645608	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	11	64645608	64645608	G	A	SNP	EHD1	ENST00000320631	human	ensembl	70_37	-1	known	missense	c.329	p.P110L	1.000	pfam_Dynamin_GTPase	pfam_Dynamin_GTPase,smart_EPS15_homology,pfscan_EF_HAND_2,pfscan_EPS15_homology	-	no_errors	EHD1	HGNC
EHMT1	79813	genome.wustl.edu	37	9	140672487	140672487	+	Silent	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	9	140672487	140672487	C	T	SNP	EHMT1	ENST00000460843	human	ensembl	70_37	+1	known	silent	c.2172	p.L724	0.986	NULL	pfam_Ankyrin_rpt,pfam_SET_dom,pfam_Pre-SET_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SET_dom,pfscan_Pre-SET_dom,prints_Ankyrin_rpt	-	no_errors	EHMT1	HGNC
ENPEP	2028	genome.wustl.edu	37	4	111397808	111397808	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	4	111397808	111397808	G	A	SNP	ENPEP	ENST00000265162	human	ensembl	70_37	+1	known	missense	c.238	p.A80T	0.083	NULL	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	ENPEP	HGNC
ENSG00000214581	0	genome.wustl.edu	37	16	34682280	34682280	+	RNA	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	16	34682280	34682280	C	T	SNP	ENSG00000214581	ENST00000568619	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.985	-	-	-	no_errors	RP11-80F22.10	Clone_based_vega_gene
ENSG00000225278	0	genome.wustl.edu	37	1	143211647	143211647	+	RNA	DEL	T	T	-			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	1	143211647	143211647	T	-	DEL	ENSG00000225278	ENST00000437865	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.128	-	-	-	no_errors	BX571672.5	Clone_based_vega_gene
ENSG00000232151	0	genome.wustl.edu	37	1	149649800	149649800	+	RNA	SNP	C	C	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	1	149649800	149649800	C	A	SNP	ENSG00000232151	ENST00000445225	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.981	-	-	-	no_errors	RP11-277L2.2	Clone_based_vega_gene
ENSG00000247033	0	genome.wustl.edu	37	16	75142719	75142719	+	RNA	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	16	75142719	75142719	C	T	SNP	ENSG00000247033	ENST00000499110	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-252E2.1	Clone_based_vega_gene
ENSG00000254614	0	genome.wustl.edu	37	11	64948463	64948463	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	11	64948463	64948463	C	T	SNP	ENSG00000254614	ENST00000526623	human	ensembl	70_37	-1	putative	missense	c.535	p.A179T	0.002	NULL	NULL	-	no_errors	AP003068.23	Clone_based_vega_gene
EP300	2033	genome.wustl.edu	37	22	41565529	41565529	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	22	41565529	41565529	G	A	SNP	EP300	ENST00000263253	human	ensembl	70_37	+1	known	missense	c.4195	p.D1399N	1.000	pfam_Histone_H3-K56_AcTrfase_RTT109	pfam_Histone_H3-K56_AcTrfase_RTT109,pfam_Nuc_rcpt_coact_CREBbp,pfam_KIX,pfam_DUF902_CREBbp,pfam_Znf_TAZ,pfam_Bromodomain,pfam_Znf_ZZ,superfamily_Bromodomain,superfamily_Znf_TAZ,superfamily_KIX,superfamily_Nuc_rcpt_coact,superfamily_Znf_FYVE_PHD,smart_Znf_TAZ,smart_Bromodomain,smart_Znf_ZZ,pfscan_KIX,pfscan_Znf_TAZ,pfscan_Znf_ZZ,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	EP300	HGNC
ERBB2	2064	genome.wustl.edu	37	17	37868208	37868208	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	17	37868208	37868208	C	T	SNP	ERBB2	ENST00000269571	human	ensembl	70_37	+1	known	missense	c.929	p.S310F	1.000	pfam_Furin-like_Cys-rich_dom,superfamily_Growth_fac_rcpt,pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_cat_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ERBB2	HGNC
ERVW-1	30816	genome.wustl.edu	37	7	92099233	92099233	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	7	92099233	92099233	G	A	SNP	ERVW-1	ENST00000493463	human	ensembl	70_37	-1	known	missense	c.463	p.H155Y	0.356	pfam_TLV/ENV_coat_polyprotein	pfam_TLV/ENV_coat_polyprotein	-	no_errors	ERVW-1	HGNC
FANCD2	2177	genome.wustl.edu	37	3	10107104	10107104	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	3	10107104	10107104	C	T	SNP	FANCD2	ENST00000287647	human	ensembl	70_37	+1	known	missense	c.2195	p.P732L	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	FANCD2	HGNC
FAT1	2195	genome.wustl.edu	37	4	187527264	187527264	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	4	187527264	187527264	G	A	SNP	FAT1	ENST00000441802	human	ensembl	70_37	-1	known	missense	c.10310	p.A3437V	0.891	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT1	HGNC
FBXO31	79791	genome.wustl.edu	37	16	87376497	87376497	+	Missense_Mutation	SNP	C	C	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	16	87376497	87376497	C	A	SNP	FBXO31	ENST00000311635	human	ensembl	70_37	-1	known	missense	c.718	p.G240C	1.000	NULL	pfam_F-box_dom_cyclin-like,superfamily_F-box_dom_cyclin-like,smart_F-box_dom_cyclin-like,pfscan_F-box_dom_cyclin-like	-	no_errors	FBXO31	HGNC
FOXK2	3607	genome.wustl.edu	37	17	80543821	80543821	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	17	80543821	80543821	C	T	SNP	FOXK2	ENST00000335255	human	ensembl	70_37	+1	known	missense	c.1321	p.R441W	1.000	NULL	pfam_TF_fork_head,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,smart_TF_fork_head,pfscan_FHA_dom,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXK2	HGNC
FOXRED2	80020	genome.wustl.edu	37	22	36886250	36886250	+	Silent	SNP	C	C	G			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	22	36886250	36886250	C	G	SNP	FOXRED2	ENST00000216187	human	ensembl	70_37	-1	known	silent	c.1860	p.L620	0.642	NULL	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD	-	no_errors	FOXRED2	HGNC
FSTL5	56884	genome.wustl.edu	37	4	162376269	162376269	+	Silent	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	4	162376269	162376269	C	T	SNP	FSTL5	ENST00000306100	human	ensembl	70_37	-1	known	silent	c.1728	p.L576	1.000	NULL	pfam_Ig_I-set,pfam_Kazal-type_dom,pfam_Ig_V-set,pfam_Prot_inh_Kazal,smart_Prot_inh_Kazal,smart_Ig_sub,smart_Ig_sub2,pfscan_EF_HAND_2,pfscan_Ig-like	-	no_errors	FSTL5	HGNC
GART	2618	genome.wustl.edu	37	21	34878376	34878376	+	Missense_Mutation	SNP	C	C	G			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	21	34878376	34878376	C	G	SNP	GART	ENST00000381815	human	ensembl	70_37	-1	known	missense	c.2488	p.E830Q	0.004	pfam_Formyl_transf_N,superfamily_Formyl_transf_N,tigrfam_PurN_trans	pfam_PRibGlycinamid_synth_ATP-grasp,pfam_Formyl_transf_N,pfam_PRibGlycinamide_synth_N,pfam_AIR_synth_C_dom,pfam_PRibGlycinamide_synth_C-dom,pfam_AIR_synth_N_dom,pfam_ATP-grasp_carboxylate-amine,pfam_CbamoylP_synth_lsu-like_ATP-bd,superfamily_Formyl_transf_N,superfamily_AIR_synth_C_dom,superfamily_PurM_N-like,superfamily_PreATP-grasp_fold,superfamily_Rudment_hybrid_motif,pfscan_ATP-grasp,tigrfam_PRibGlycinamide_synth,tigrfam_PurM_cligase,tigrfam_PurN_trans	-	no_errors	GART	HGNC
HAS1	3036	genome.wustl.edu	37	19	52217408	52217408	+	Missense_Mutation	SNP	C	C	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	19	52217408	52217408	C	A	SNP	HAS1	ENST00000594621	human	ensembl	70_37	-1	putative	missense	c.497	p.C166F	0.091	NULL	pfam_Chitin_synth_fng,pfam_Glyco_trans_2	-	no_errors	HAS1	HGNC
HELZ	9931	genome.wustl.edu	37	17	65132235	65132235	+	Missense_Mutation	SNP	C	C	G			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	17	65132235	65132235	C	G	SNP	HELZ	ENST00000358691	human	ensembl	70_37	-1	known	missense	c.3033	p.K1011N	1.000	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	HELZ	HGNC
HEXDC	284004	genome.wustl.edu	37	17	80393586	80393586	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	17	80393586	80393586	G	A	SNP	HEXDC	ENST00000337014	human	ensembl	70_37	+1	known	missense	c.469	p.E157K	0.918	pfam_Glyco_hydro_20_cat-core,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_20_cat-core,superfamily_Glycoside_hydrolase_SF	-	no_errors	HEXDC	HGNC
HMGB1P5	10354	genome.wustl.edu	37	3	22424293	22424293	+	RNA	SNP	C	C	G			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	3	22424293	22424293	C	G	SNP	HMGB1P5	ENST00000451497	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	HMGB1P5	HGNC
HSPE1	3336	genome.wustl.edu	37	2	198365389	198365389	+	RNA	SNP	C	C	G			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	2	198365389	198365389	C	G	SNP	HSPE1	ENST00000465573	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	HSPE1	HGNC
HTRA1	5654	genome.wustl.edu	37	10	124266386	124266386	+	Silent	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	10	124266386	124266386	C	T	SNP	HTRA1	ENST00000368984	human	ensembl	70_37	+1	known	silent	c.957	p.T319	0.003	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,prints_Peptidase_S1C	pfam_Peptidase_S1_S6,pfam_PDZ,pfam_Kazal-type_dom,pfam_Prot_inh_Kazal,pfam_IGFBP-like,superfamily_Pept_cys/ser_Trypsin-like,superfamily_PDZ,smart_IGFBP-like,smart_Prot_inh_Kazal,smart_PDZ,prints_Peptidase_S1C,pfscan_PDZ	-	no_errors	HTRA1	HGNC
KIAA1462	57608	genome.wustl.edu	37	10	30316447	30316447	+	Missense_Mutation	SNP	T	T	C			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	10	30316447	30316447	T	C	SNP	KIAA1462	ENST00000375377	human	ensembl	70_37	-1	known	missense	c.2630	p.E877G	0.000	NULL	NULL	-	no_errors	KIAA1462	HGNC
L1CAM	3897	genome.wustl.edu	37	X	153132162	153132162	+	Silent	SNP	G	G	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	X	153132162	153132162	G	T	SNP	L1CAM	ENST00000543994	human	ensembl	70_37	-1	known	silent	c.2379	p.V793	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	L1CAM	HGNC
LAMA2	3908	genome.wustl.edu	37	6	129762061	129762061	+	Silent	SNP	C	C	G			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	6	129762061	129762061	C	G	SNP	LAMA2	ENST00000421865	human	ensembl	70_37	+1	known	silent	c.6186	p.L2062	0.000	pfam_Laminin_II	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_B_type_IV,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,superfamily_t-SNARE,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA2	HGNC
LAMA4	3910	genome.wustl.edu	37	6	112575244	112575244	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	6	112575244	112575244	C	T	SNP	LAMA4	ENST00000230538	human	ensembl	70_37	-1	known	missense	c.109	p.E37K	1.000	NULL	pfam_Laminin_G,pfam_Laminin_I,pfam_Laminin_II,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Focal_adhesion_kin_target_dom,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Laminin_G	-	no_errors	LAMA4	HGNC
LARP1	23367	genome.wustl.edu	37	5	154181657	154181657	+	Missense_Mutation	SNP	G	G	C			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	5	154181657	154181657	G	C	SNP	LARP1	ENST00000336314	human	ensembl	70_37	+1	known	missense	c.1576	p.E526Q	1.000	NULL	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,smart_DM15,pfscan_Lupus_La_RNA-bd	-	no_errors	LARP1	HGNC
LMBR1L	55716	genome.wustl.edu	37	12	49504417	49504417	+	RNA	SNP	C	C	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	12	49504417	49504417	C	A	SNP	LMBR1L	ENST00000548983	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.787	-	-	-	no_errors	LMBR1L	HGNC
LMTK3	114783	genome.wustl.edu	37	19	49000803	49000803	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	19	49000803	49000803	C	T	SNP	LMTK3	ENST00000270238	human	ensembl	70_37	-1	known	missense	c.3610	p.E1204K	0.993	smart_Ser/Thr_dual-sp_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LMTK3	HGNC
LOC257396	257396	genome.wustl.edu	37	5	52405689	52405689	+	RNA	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	5	52405689	52405689	C	T	SNP	LOC257396	ENST00000502171	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.021	-	-	-	no_errors	CTD-2366F13.1	Clone_based_vega_gene
LOC729461	729461	genome.wustl.edu	37	22	20640623	20640623	+	RNA	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	22	20640623	20640623	C	T	SNP	LOC729461	ENST00000577456	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	AC011718.2	Clone_based_vega_gene
LPHN3	23284	genome.wustl.edu	37	4	62598964	62598964	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	4	62598964	62598964	G	A	SNP	LPHN3	ENST00000507625	human	ensembl	70_37	+1	known	missense	c.1091	p.R364Q	1.000	pfam_Olfac-like,smart_Olfac-like,pfscan_Olfac-like	pfam_GPCR_2_latrophilin_rcpt_C,pfam_Olfac-like,pfam_DUF3497,pfam_GPCR_2_secretin-like,pfam_Lectin_gal-bd_dom,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,smart_Olfac-like,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Lectin_gal-bd_dom,pfscan_Olfac-like,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_latrophilin,prints_GPCR_2_secretin-like	-	no_errors	LPHN3	HGNC
LRRC37A6P	387646	genome.wustl.edu	37	10	27538702	27538702	+	RNA	SNP	T	T	C			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	10	27538702	27538702	T	C	SNP	LRRC37A6P	ENST00000284414	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	LRRC37A6P	HGNC
MAPKAP1	79109	genome.wustl.edu	37	9	128327727	128327728	+	RNA	INS	-	-	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	9	128327727	128327728	-	T	INS	MAPKAP1	ENST00000448439	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000:0.003	-	-	-	no_errors	MAPKAP1	HGNC
MGA	23269	genome.wustl.edu	37	15	42058491	42058491	+	Missense_Mutation	SNP	G	G	C			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	15	42058491	42058491	G	C	SNP	MGA	ENST00000219905	human	ensembl	70_37	+1	known	missense	c.8211	p.Q2737H	0.985	NULL	pfam_TF_T-box,pfam_HLH_dom,superfamily_p53-like_TF_DNA-bd,superfamily_HLH_dom,smart_TF_T-box,smart_HLH_dom,pfscan_HLH_dom,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	MGA	HGNC
MGRN1	23295	genome.wustl.edu	37	16	4700414	4700414	+	Missense_Mutation	SNP	C	C	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	16	4700414	4700414	C	A	SNP	MGRN1	ENST00000262370	human	ensembl	70_37	+1	known	missense	c.137	p.T46N	1.000	NULL	smart_Znf_RING,pfscan_Znf_RING	-	no_errors	MGRN1	HGNC
MIR3140	100422896	genome.wustl.edu	37	4	153410533	153410533	+	RNA	SNP	A	A	G			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	4	153410533	153410533	A	G	SNP	MIR3140	ENST00000583685	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MIR3140	HGNC
MKL1	57591	genome.wustl.edu	37	22	40915231	40915231	+	RNA	SNP	G	G	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	22	40915231	40915231	G	A	SNP	MKL1	ENST00000463769	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MKL1	HGNC
KMT2A	4297	genome.wustl.edu	37	11	118342900	118342900	+	Silent	SNP	A	A	G			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	11	118342900	118342900	A	G	SNP	MLL	ENST00000389506	human	ensembl	70_37	+1	known	silent	c.1026	p.K342	0.912	pirsf_MeTrfase_trithorax	pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_Bromodomain,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pirsf_MeTrfase_trithorax,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC,pfscan_Bromodomain	-	no_errors	MLL	HGNC
KMT2A	4297	genome.wustl.edu	37	11	118376933	118376933	+	Silent	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	11	118376933	118376933	C	T	SNP	MLL	ENST00000389506	human	ensembl	70_37	+1	known	silent	c.10317	p.A3439	0.029	pirsf_MeTrfase_trithorax	pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_Bromodomain,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pirsf_MeTrfase_trithorax,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC,pfscan_Bromodomain	-	no_errors	MLL	HGNC
MMP20	9313	genome.wustl.edu	37	11	102447981	102447981	+	RNA	SNP	C	C	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	11	102447981	102447981	C	A	SNP	MMP20	ENST00000542305	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	MMP20	HGNC
MUC16	94025	genome.wustl.edu	37	19	9043453	9043453	+	Missense_Mutation	SNP	G	G	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	19	9043453	9043453	G	T	SNP	MUC16	ENST00000397910	human	ensembl	70_37	-1	known	missense	c.36076	p.H12026N	0.782	NULL	pfam_SEA,smart_SEA,pfscan_SEA	-	no_errors	MUC16	HGNC
MUC2	4583	genome.wustl.edu	37	11	1092219	1092219	+	Silent	SNP	C	C	G			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	11	1092219	1092219	C	G	SNP	MUC2	ENST00000441003	human	ensembl	70_37	+1	known	silent	c.4038	p.L1346	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,superfamily_Prot_inh_PMP,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC2	HGNC
NETO1	81832	genome.wustl.edu	37	18	70461384	70461384	+	Missense_Mutation	SNP	T	T	C			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	18	70461384	70461384	T	C	SNP	NETO1	ENST00000327305	human	ensembl	70_37	-1	known	missense	c.607	p.K203E	1.000	pfam_CUB,superfamily_CUB,smart_CUB,pfscan_CUB	pfam_CUB,pfam_LDrepeatLR_classA_rpt,superfamily_CUB,superfamily_LDrepeatLR_classA_rpt,smart_CUB,smart_LDrepeatLR_classA_rpt,pfscan_CUB,pfscan_LDrepeatLR_classA_rpt	-	no_errors	NETO1	HGNC
NFE2L2	4780	genome.wustl.edu	37	2	178098944	178098944	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	2	178098944	178098944	C	T	SNP	NFE2L2	ENST00000397062	human	ensembl	70_37	-1	known	missense	c.101	p.R34Q	1.000	NULL	pfam_bZIP,superfamily_Euk_TF_DNA-bd,superfamily_Serpin_dom,smart_bZIP,pfscan_bZIP	-	no_errors	NFE2L2	HGNC
NPTXR	23467	genome.wustl.edu	37	22	39219171	39219171	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	22	39219171	39219171	C	T	SNP	NPTXR	ENST00000333039	human	ensembl	70_37	-1	known	missense	c.1195	p.G399R	1.000	pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,prints_Pentaxin	pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,prints_Pentaxin	-	no_errors	NPTXR	HGNC
OR10W1	81341	genome.wustl.edu	37	11	58034737	58034737	+	Silent	SNP	A	A	G			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	11	58034737	58034737	A	G	SNP	OR10W1	ENST00000395079	human	ensembl	70_37	-1	known	silent	c.594	p.I198	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10W1	HGNC
OR8K3	219473	genome.wustl.edu	37	11	56086680	56086681	+	Frame_Shift_Ins	INS	-	-	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	11	56086680	56086681	-	A	INS	OR8K3	ENST00000312711	human	ensembl	70_37	+1	known	frame_shift_ins	c.898_899	p.L300fs	0.004:0.022	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8K3	HGNC
PALM3	342979	genome.wustl.edu	37	19	14167476	14167476	+	Missense_Mutation	SNP	G	G	C			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	19	14167476	14167476	G	C	SNP	PALM3	ENST00000340790	human	ensembl	70_37	-1	known	missense	c.267	p.F89L	1.000	NULL	NULL	-	no_errors	PALM3	HGNC
PCDHA1	56147	genome.wustl.edu	37	5	140166014	140166014	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	5	140166014	140166014	C	T	SNP	PCDHA1	ENST00000504120	human	ensembl	70_37	+1	known	missense	c.139	p.R47C	1.000	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA1	HGNC
PCDHGA2	56113	genome.wustl.edu	37	5	140720771	140720771	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	5	140720771	140720771	G	A	SNP	PCDHGA2	ENST00000394576	human	ensembl	70_37	+1	known	missense	c.2233	p.G745R	0.987	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHGA2	HGNC
PCDHGB7	56099	genome.wustl.edu	37	5	140797447	140797447	+	Silent	SNP	G	G	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	5	140797447	140797447	G	A	SNP	PCDHGB7	ENST00000398594	human	ensembl	70_37	+1	known	silent	c.21	p.Q7	0.735	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB7	HGNC
PFDN4	5203	genome.wustl.edu	37	20	52835609	52835609	+	Nonsense_Mutation	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	20	52835609	52835609	C	T	SNP	PFDN4	ENST00000441080	human	ensembl	70_37	+1	known	nonsense	c.325	p.Q109*	1.000	pfam_PFD_beta-like,superfamily_Prefoldin,pirsf_Prefoldin_su-4	pfam_PFD_beta-like,superfamily_Prefoldin,pirsf_Prefoldin_su-4	-	no_errors	PFDN4	HGNC
PGK1	5230	genome.wustl.edu	37	X	77381488	77381488	+	RNA	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	X	77381488	77381488	C	T	SNP	PGK1	ENST00000476531	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.984	-	-	-	no_errors	PGK1	HGNC
PIK3CA	5290	genome.wustl.edu	37	3	178936091	178936091	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	3	178936091	178936091	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	70_37	+1	known	missense	c.1633	p.E545K	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC
POM121L12	285877	genome.wustl.edu	37	7	53103693	53103693	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	7	53103693	53103693	G	A	SNP	POM121L12	ENST00000408890	human	ensembl	70_37	+1	known	missense	c.329	p.R110Q	0.000	NULL	NULL	-	no_errors	POM121L12	HGNC
PRH2	5555	genome.wustl.edu	37	12	11083355	11083355	+	Missense_Mutation	SNP	G	G	C			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	12	11083355	11083355	G	C	SNP	PRH2	ENST00000381847	human	ensembl	70_37	+1	known	missense	c.195	p.Q65H	0.000	NULL	NULL	-	no_errors	PRH2	HGNC
PSTPIP1	9051	genome.wustl.edu	37	15	77317846	77317846	+	Missense_Mutation	SNP	G	G	C			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	15	77317846	77317846	G	C	SNP	PSTPIP1	ENST00000559785	human	ensembl	70_37	+1	known	missense	c.450	p.E150D	1.000	pfam_FCH,superfamily_Prismane-like,smart_FCH	pfam_FCH,superfamily_Prismane-like,smart_FCH,pfscan_FCH	-	no_errors	PSTPIP1	HGNC
PTCD1	26024	genome.wustl.edu	37	7	99032527	99032527	+	Silent	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	7	99032527	99032527	C	T	SNP	PTCD1	ENST00000555673	human	ensembl	70_37	-1	known	silent	c.486	p.R162	0.003	NULL	pfam_Pentatricopeptide_repeat,pfam_F1F0-ATPsyn_F_prd,tigrfam_Pentatricopeptide_repeat	-	no_errors	PTCD1	HGNC
RAPGEF1	2889	genome.wustl.edu	37	9	134465279	134465279	+	Missense_Mutation	SNP	T	T	C			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	9	134465279	134465279	T	C	SNP	RAPGEF1	ENST00000372190	human	ensembl	70_37	-1	known	missense	c.2357	p.E786G	1.000	pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,pfscan_Ras-like_Gua-exchang_fac_N	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RAPGEF1	HGNC
RB1	5925	genome.wustl.edu	37	13	48942685	48942685	+	Nonsense_Mutation	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	13	48942685	48942685	C	T	SNP	RB1	ENST00000267163	human	ensembl	70_37	+1	known	nonsense	c.1072	p.R358*	0.738	NULL	pfam_Rb_C,pfam_RB_A,pfam_RB_B,pfam_DUF3452_retinoblatoma-assoc,superfamily_Cyclin-like,superfamily_FH2_actin-bd,smart_Cyclin-like	-	no_errors	RB1	HGNC
RC3H2	54542	genome.wustl.edu	37	9	125616293	125616293	+	Missense_Mutation	SNP	C	C	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	9	125616293	125616293	C	A	SNP	RC3H2	ENST00000357244	human	ensembl	70_37	-1	known	missense	c.3055	p.D1019Y	1.000	NULL	pfam_Znf_CCCH,smart_Znf_RING,smart_Znf_CCCH,pfscan_Znf_RING	-	no_errors	RC3H2	HGNC
REL	5966	genome.wustl.edu	37	2	61147541	61147541	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	2	61147541	61147541	G	A	SNP	REL	ENST00000295025	human	ensembl	70_37	+1	known	missense	c.946	p.D316N	0.006	superfamily_Ig_E-set	pfam_RHD,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT_TIG_rcpt,pfscan_RHD,prints_NF_Rel_dor	-	no_errors	REL	HGNC
RIOK3	8780	genome.wustl.edu	37	18	21046196	21046196	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	18	21046196	21046196	C	T	SNP	RIOK3	ENST00000339486	human	ensembl	70_37	+1	known	missense	c.643	p.R215C	1.000	pirsf_Ser/Thr_kinase_Rio3	pfam_RIO-like_kinase,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_RIO_kinase,pirsf_Ser/Thr_kinase_Rio3	-	no_errors	RIOK3	HGNC
RNMTL1	55178	genome.wustl.edu	37	17	695084	695084	+	Missense_Mutation	SNP	G	G	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	17	695084	695084	G	T	SNP	RNMTL1	ENST00000304478	human	ensembl	70_37	+1	known	missense	c.1038	p.W346C	1.000	pfam_SpoU_MeTrfase	pfam_SpoU_MeTrfase,pfam_SpoU_subst-bd,smart_SpoU_subst-bd	-	no_errors	RNMTL1	HGNC
RNPEP	6051	genome.wustl.edu	37	1	201966484	201966484	+	Missense_Mutation	SNP	G	G	C			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	1	201966484	201966484	G	C	SNP	RNPEP	ENST00000295640	human	ensembl	70_37	+1	known	missense	c.892	p.G298R	1.000	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	pfam_Peptidase_M1_N,pfam_Peptidase_M1_C,superfamily_ARM-type_fold,prints_Peptidase_M1_N	-	no_errors	RNPEP	HGNC
SEMA4G	57715	genome.wustl.edu	37	10	102740026	102740026	+	Missense_Mutation	SNP	C	C	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	10	102740026	102740026	C	A	SNP	SEMA4G	ENST00000210633	human	ensembl	70_37	+1	known	missense	c.1276	p.R426S	0.959	pfam_Semaphorin/CD100_Ag,superfamily_Semaphorin/CD100_Ag,smart_Semaphorin/CD100_Ag,pfscan_Semaphorin/CD100_Ag	pfam_Semaphorin/CD100_Ag,pfam_Plexin_repeat,superfamily_Semaphorin/CD100_Ag,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,smart_Ig_sub,pfscan_Semaphorin/CD100_Ag,pfscan_Ig-like	-	no_errors	SEMA4G	HGNC
SIGLEC8	27181	genome.wustl.edu	37	19	51961226	51961226	+	Nonsense_Mutation	SNP	A	A	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	19	51961226	51961226	A	T	SNP	SIGLEC8	ENST00000321424	human	ensembl	70_37	-1	known	nonsense	c.416	p.L139*	0.001	smart_Ig_sub	pfam_Ig_V-set,pfam_Immunoglobulin,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	SIGLEC8	HGNC
SKAP1	8631	genome.wustl.edu	37	17	46262164	46262164	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	17	46262164	46262164	C	T	SNP	SKAP1	ENST00000336915	human	ensembl	70_37	-1	known	missense	c.488	p.R163Q	0.998	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Pleckstrin_homology,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_SH3_domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	SKAP1	HGNC
SLC27A5	10998	genome.wustl.edu	37	19	59021339	59021339	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	19	59021339	59021339	C	T	SNP	SLC27A5	ENST00000263093	human	ensembl	70_37	-1	known	missense	c.932	p.R311Q	0.000	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	SLC27A5	HGNC
SLC9A8	23315	genome.wustl.edu	37	20	48467300	48467301	+	Frame_Shift_Ins	INS	-	-	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	20	48467300	48467301	-	T	INS	SLC9A8	ENST00000417961	human	ensembl	70_37	+1	known	frame_shift_ins	c.536_537	p.F183fs	0.284:0.189	pfam_Cation/H_exchanger,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A8	HGNC
SNX27	81609	genome.wustl.edu	37	1	151611373	151611373	+	Missense_Mutation	SNP	G	G	C			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	1	151611373	151611373	G	C	SNP	SNX27	ENST00000368841	human	ensembl	70_37	+1	known	missense	c.190	p.E64Q	1.000	NULL	NULL	-	no_errors	SNX27	HGNC
SNX27	81609	genome.wustl.edu	37	1	151611518	151611518	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	1	151611518	151611518	G	A	SNP	SNX27	ENST00000368843	human	ensembl	70_37	+1	known	missense	c.466	p.D156N	1.000	superfamily_Phox,smart_Phox	pfam_Phox,pfam_PDZ,pfam_Ras-assoc,superfamily_Phox,superfamily_PDZ,smart_PDZ,smart_Phox,pfscan_PDZ,pfscan_Phox,pfscan_Ras-assoc	-	no_errors	SNX27	HGNC
SPACA3	124912	genome.wustl.edu	37	17	31322636	31322636	+	Missense_Mutation	SNP	C	C	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	17	31322636	31322636	C	A	SNP	SPACA3	ENST00000269053	human	ensembl	70_37	+1	known	missense	c.244	p.L82I	0.042	NULL	pfam_Glyco_hydro_22,superfamily_Lysozyme-like_dom,smart_Glyco_hydro_22,prints_Glyco_hydro_22,prints_Glyco_hydro_22_lys	-	no_errors	SPACA3	HGNC
SPDEF	25803	genome.wustl.edu	37	6	34512080	34512080	+	Silent	SNP	G	G	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	6	34512080	34512080	G	A	SNP	SPDEF	ENST00000374037	human	ensembl	70_37	-1	known	silent	c.153	p.P51	0.916	NULL	pfam_Ets,pfam_Pointed_dom,superfamily_SAM/pointed,smart_Pointed_dom,smart_Ets,pfscan_Ets,prints_Ets	-	no_errors	SPDEF	HGNC
SPOCK3	50859	genome.wustl.edu	37	4	167656176	167656176	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	4	167656176	167656176	C	T	SNP	SPOCK3	ENST00000357154	human	ensembl	70_37	-1	known	missense	c.1207	p.D403N	0.999	NULL	pfam_SPARC/Testican_Ca-bd-dom,pfam_Thyroglobulin_1,pfam_Kazal-type_dom,pfam_Prot_inh_Kazal,superfamily_Thyroglobulin_1,smart_Prot_inh_Kazal,smart_Thyroglobulin_1,pfscan_Thyroglobulin_1	-	no_errors	SPOCK3	HGNC
SREK1	140890	genome.wustl.edu	37	5	65475515	65475515	+	RNA	SNP	G	G	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	5	65475515	65475515	G	T	SNP	SREK1	ENST00000284041	human	ensembl	70_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SREK1	HGNC
SRPRB	58477	genome.wustl.edu	37	3	133525541	133525541	+	Missense_Mutation	SNP	T	T	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	3	133525541	133525541	T	A	SNP	SRPRB	ENST00000466490	human	ensembl	70_37	+1	known	missense	c.243	p.F81L	0.999	pfam_SRP_receptor_beta_su,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,pfam_Gtr1_RagA	pfam_SRP_receptor_beta_su,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,pfam_Gtr1_RagA	-	no_errors	SRPRB	HGNC
TCN1	6947	genome.wustl.edu	37	11	59626606	59626606	+	Missense_Mutation	SNP	C	C	G			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	11	59626606	59626606	C	G	SNP	TCN1	ENST00000257264	human	ensembl	70_37	-1	known	missense	c.691	p.E231Q	0.003	pfam_Cbl-bd_transpt_euk	pfam_Cbl-bd_transpt_euk	-	no_errors	TCN1	HGNC
TENM1	10178	genome.wustl.edu	37	X	123699264	123699264	+	Missense_Mutation	SNP	C	C	G			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	X	123699264	123699264	C	G	SNP	TENM1	ENST00000422452	human	ensembl	70_37	-1	known	missense	c.2224	p.E742Q	1.000	pfam_EGF_extracell,smart_EG-like_dom	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD	-	no_errors	TENM1	HGNC
TICRR	90381	genome.wustl.edu	37	15	90164700	90164700	+	Silent	SNP	C	C	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	15	90164700	90164700	C	A	SNP	TICRR	ENST00000268138	human	ensembl	70_37	+1	known	silent	c.3231	p.I1077	0.118	NULL	NULL	-	no_errors	TICRR	HGNC
TMEM132D	121256	genome.wustl.edu	37	12	130015619	130015619	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	12	130015619	130015619	G	A	SNP	TMEM132D	ENST00000422113	human	ensembl	70_37	-1	known	missense	c.1100	p.A367V	0.006	NULL	NULL	-	no_errors	TMEM132D	HGNC
TNFAIP6	7130	genome.wustl.edu	37	2	152236046	152236046	+	Frame_Shift_Del	DEL	A	A	-			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	2	152236046	152236046	A	-	DEL	TNFAIP6	ENST00000243347	human	ensembl	70_37	+1	known	frame_shift_del	c.833	p.*278fs	0.961	NULL	pfam_CUB,pfam_Link,superfamily_CUB,superfamily_C-type_lectin_fold,smart_Link,smart_CUB,pfscan_CUB,pfscan_Link,prints_Link	-	no_errors	TNFAIP6	HGNC
TRAPPC2L	51693	genome.wustl.edu	37	16	88923573	88923573	+	Missense_Mutation	SNP	C	C	G			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	16	88923573	88923573	C	G	SNP	TRAPPC2L	ENST00000301021	human	ensembl	70_37	+1	known	missense	c.15	p.I5M	0.996	superfamily_Longin-like_dom	pfam_Sedlin,pfam_Sybindin,superfamily_Longin-like_dom	-	no_errors	TRAPPC2L	HGNC
TRPM1	4308	genome.wustl.edu	37	15	31295133	31295133	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	15	31295133	31295133	G	A	SNP	TRPM1	ENST00000542188	human	ensembl	70_37	-1	known	missense	c.3821	p.A1274V	0.772	NULL	pfam_Ion_trans_dom	-	no_errors	TRPM1	HGNC
TTN	7273	genome.wustl.edu	37	2	179594472	179594472	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	2	179594472	179594472	C	T	SNP	TTN	ENST00000342992	human	ensembl	70_37	-1	known	missense	c.14776	p.V4926I	0.992	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_V-set_subgr,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC
UBE2O	63893	genome.wustl.edu	37	17	74394636	74394636	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	17	74394636	74394636	C	T	SNP	UBE2O	ENST00000319380	human	ensembl	70_37	-1	known	missense	c.1813	p.G605S	1.000	NULL	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2O	HGNC
UGT1A5	54579	genome.wustl.edu	37	2	234622208	234622208	+	Missense_Mutation	SNP	T	T	C			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	2	234622208	234622208	T	C	SNP	UGT1A5	ENST00000373414	human	ensembl	70_37	+1	known	missense	c.571	p.S191P	0.001	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT1A5	HGNC
USP32	84669	genome.wustl.edu	37	17	58303537	58303537	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	17	58303537	58303537	G	A	SNP	USP32	ENST00000300896	human	ensembl	70_37	-1	known	missense	c.1295	p.S432L	0.016	pfam_Pept_C19_DUSP,smart_Pept_C19_DUSP	pfam_Peptidase_C19,pfam_Pept_C19_DUSP,smart_EF_hand_Ca-bd,smart_Pept_C19_DUSP,pfscan_EF_HAND_2,pfscan_Peptidase_C19,prints_Recoverin	-	no_errors	USP32	HGNC
USP6	9098	genome.wustl.edu	37	17	5037191	5037191	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	17	5037191	5037191	G	T	SNP	USP6	ENST00000250066	human	ensembl	70_37	+1	known	nonsense	c.394	p.E132*	0.941	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Peptidase_C19,pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom,pfscan_Peptidase_C19	-	no_errors	USP6	HGNC
USP9X	8239	genome.wustl.edu	37	X	41043695	41043695	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	X	41043695	41043695	G	A	SNP	USP9X	ENST00000324545	human	ensembl	70_37	+1	known	missense	c.3325	p.D1109N	1.000	NULL	pfam_Peptidase_C19,superfamily_ARM-type_fold,pfscan_Peptidase_C19	-	no_errors	USP9X	HGNC
VPS16	64601	genome.wustl.edu	37	20	2845015	2845015	+	Silent	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	20	2845015	2845015	C	T	SNP	VPS16	ENST00000380445	human	ensembl	70_37	+1	known	silent	c.1725	p.F575	1.000	pfam_Vps16_C,pirsf_VPS16	pfam_Vps16_N,pfam_Vps16_C,pirsf_VPS16	-	no_errors	VPS16	HGNC
WDR45	11152	genome.wustl.edu	37	X	48935159	48935159	+	RNA	SNP	G	G	C			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	X	48935159	48935159	G	C	SNP	WDR45	ENST00000465431	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.031	-	-	-	no_errors	WDR45	HGNC
WDR7	23335	genome.wustl.edu	37	18	54694411	54694411	+	Silent	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	18	54694411	54694411	C	T	SNP	WDR7	ENST00000254442	human	ensembl	70_37	+1	known	silent	c.4446	p.D1482	0.987	NULL	pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR7	HGNC
WNK1	65125	genome.wustl.edu	37	12	970493	970493	+	Silent	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	12	970493	970493	C	T	SNP	WNK1	ENST00000530271	human	ensembl	70_37	+1	known	silent	c.1935	p.P645	0.896	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	WNK1	HGNC
ZAP70	7535	genome.wustl.edu	37	2	98351725	98351725	+	Silent	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	2	98351725	98351725	C	T	SNP	ZAP70	ENST00000264972	human	ensembl	70_37	+1	known	silent	c.1095	p.D365	0.720	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_SYK/ZAP70,pfscan_Prot_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_SH2,superfamily_Kinase-like_dom,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_SYK/ZAP70,pfscan_SH2,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	ZAP70	HGNC
ZC3H12A	80149	genome.wustl.edu	37	1	37947261	37947261	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	1	37947261	37947261	C	T	SNP	ZC3H12A	ENST00000373082	human	ensembl	70_37	+1	known	missense	c.643	p.R215C	1.000	pfam_RNase_Zc3h12	pfam_RNase_Zc3h12	-	no_errors	ZC3H12A	HGNC
ZDHHC11	79844	genome.wustl.edu	37	5	825288	825288	+	Silent	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	5	825288	825288	C	T	SNP	ZDHHC11	ENST00000283441	human	ensembl	70_37	-1	known	silent	c.1014	p.S338	0.001	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC11	HGNC
ZFP2	80108	genome.wustl.edu	37	5	178358817	178358817	+	Missense_Mutation	SNP	G	G	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	5	178358817	178358817	G	T	SNP	ZFP2	ENST00000361362	human	ensembl	70_37	+1	known	missense	c.503	p.S168I	0.958	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFP2	HGNC
ZFR2	23217	genome.wustl.edu	37	19	3822092	3822092	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	19	3822092	3822092	C	T	SNP	ZFR2	ENST00000262961	human	ensembl	70_37	-1	known	missense	c.1478	p.R493Q	1.000	smart_Znf_U1	pfam_DZF,smart_Znf_U1,smart_Znf_C2H2-like,smart_DZF	-	no_errors	ZFR2	HGNC
ZNF19	7567	genome.wustl.edu	37	16	71509103	71509103	+	Silent	SNP	G	G	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	16	71509103	71509103	G	T	SNP	ZNF19	ENST00000288177	human	ensembl	70_37	-1	known	silent	c.1347	p.L449	0.140	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF19	HGNC
ZNF366	167465	genome.wustl.edu	37	5	71756680	71756680	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	5	71756680	71756680	C	T	SNP	ZNF366	ENST00000318442	human	ensembl	70_37	-1	known	missense	c.644	p.R215Q	0.007	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF366	HGNC
ZNF415	55786	genome.wustl.edu	37	19	53612316	53612316	+	Missense_Mutation	SNP	A	A	G			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	19	53612316	53612316	A	G	SNP	ZNF415	ENST00000448501	human	ensembl	70_37	-1	known	missense	c.1126	p.Y376H	0.008	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,smart_Znf_BED_prd,pfscan_Znf_C2H2	-	no_errors	ZNF415	HGNC
ZNF638	27332	genome.wustl.edu	37	2	71653849	71653849	+	Missense_Mutation	SNP	C	C	G			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	2	71653849	71653849	C	G	SNP	ZNF638	ENST00000264447	human	ensembl	70_37	+1	known	missense	c.4850	p.A1617G	1.000	NULL	pfam_RRM_dom,smart_Znf_U1,smart_Znf_C2H2-like,smart_RRM_dom,pfscan_Znf_C2H2_matrin,pfscan_RRM_dom	-	no_errors	ZNF638	HGNC
ZNF799	90576	genome.wustl.edu	37	19	12502496	12502496	+	Missense_Mutation	SNP	G	G	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	19	12502496	12502496	G	T	SNP	ZNF799	ENST00000430385	human	ensembl	70_37	-1	known	missense	c.716	p.S239Y	0.001	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF799	HGNC
ZNF91	7644	genome.wustl.edu	37	19	23544220	23544220	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	19	23544220	23544220	C	T	SNP	ZNF91	ENST00000300619	human	ensembl	70_37	-1	known	missense	c.1561	p.E521K	0.004	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF91	HGNC
ZXDB	158586	genome.wustl.edu	37	X	57619632	57619632	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A852-01A-11D-A351-09	TCGA-JW-A852-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d99b5656-9672-42a8-8902-6ee10c559373	0a1ed0b6-1b6d-4e27-b5eb-5fee4218c7dc	X	57619632	57619632	G	A	SNP	ZXDB	ENST00000374888	human	ensembl	70_37	+1	known	missense	c.1151	p.R384H	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZXDB	HGNC
