Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source
ARF4	378	genome.wustl.edu	37	3	57563077	57563077	+	Missense_Mutation	SNP	C	C	T			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	3	57563077	57563077	C	T	SNP	ARF4	ENST00000303436	human	ensembl	70_37	-1	known	missense	c.296	p.R99K	1.000	pfam_Small_GTPase_ARF/SAR,pfam_SRP_receptor_beta_su,pfam_Small_GTPase,pfam_Gtr1_RagA,pfam_Gprotein_alpha_su,pfam_MIRO-like,smart_Small_GTPase_SAR1,smart_Small_GTPase_ARF,smart_Small_GTPase_Rab_type,prints_Small_GTPase_ARF/SAR,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase_ARF/SAR,pfam_SRP_receptor_beta_su,pfam_Small_GTPase,pfam_Gtr1_RagA,pfam_Gprotein_alpha_su,pfam_MIRO-like,smart_Small_GTPase_SAR1,smart_Small_GTPase_ARF,smart_Small_GTPase_Rab_type,prints_Small_GTPase_ARF/SAR,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	ARF4	HGNC
ARHGEF38	54848	genome.wustl.edu	37	4	106566402	106566402	+	Silent	SNP	G	G	A			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	4	106566402	106566402	G	A	SNP	ARHGEF38	ENST00000420470	human	ensembl	70_37	+1	putative	silent	c.732	p.V244	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_BAR_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_DH-domain,superfamily_SH3_domain,smart_DH-domain,smart_BAR_dom,smart_SH3_domain,pfscan_BAR_dom,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	ARHGEF38	HGNC
ATP1B3	483	genome.wustl.edu	37	3	141644553	141644553	+	RNA	SNP	G	G	A			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	3	141644553	141644553	G	A	SNP	ATP1B3	ENST00000484727	human	ensembl	70_37	+1	putative	rna	NULL	NULL	0.003	-	-	-	no_errors	ATP1B3	HGNC
BATF2	116071	genome.wustl.edu	37	11	64764365	64764365	+	Missense_Mutation	SNP	C	C	T			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	11	64764365	64764365	C	T	SNP	BATF2	ENST00000301887	human	ensembl	70_37	-1	known	missense	c.22	p.G8R	0.005	superfamily_Euk_TF_DNA-bd	pfam_bZIP,superfamily_Euk_TF_DNA-bd,smart_bZIP,pfscan_bZIP	-	no_errors	BATF2	HGNC
BEND7	222389	genome.wustl.edu	37	10	13481266	13481266	+	Missense_Mutation	SNP	G	G	A			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	10	13481266	13481266	G	A	SNP	BEND7	ENST00000396900	human	ensembl	70_37	-1	known	missense	c.1466	p.S489L	0.002	NULL	pfam_BEN_domain	-	no_errors	BEND7	HGNC
C15orf40	123207	genome.wustl.edu	37	15	83680348	83680348	+	Silent	SNP	G	G	A			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	15	83680348	83680348	G	A	SNP	C15orf40	ENST00000451195	human	ensembl	70_37	-1	known	silent	c.12	p.L4	0.000	NULL	pfam_DUF167,superfamily_DUF167	-	no_errors	C15orf40	HGNC
C7orf57	136288	genome.wustl.edu	37	7	48081068	48081068	+	Missense_Mutation	SNP	G	G	C			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	7	48081068	48081068	G	C	SNP	C7orf57	ENST00000348904	human	ensembl	70_37	+1	known	missense	c.193	p.E65Q	1.000	NULL	NULL	-	no_errors	C7orf57	HGNC
CCAR1	55749	genome.wustl.edu	37	10	70546378	70546378	+	Missense_Mutation	SNP	T	T	C			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	10	70546378	70546378	T	C	SNP	CCAR1	ENST00000265872	human	ensembl	70_37	+1	known	missense	c.2809	p.C937R	1.000	NULL	pfam_SAP_DNA-bd,superfamily_NA-bd_OB-fold-like,smart_SAP_DNA-bd,pfscan_SAP_DNA-bd	-	no_errors	CCAR1	HGNC
CREB3	10488	genome.wustl.edu	37	9	35736237	35736237	+	Missense_Mutation	SNP	C	C	T			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	9	35736237	35736237	C	T	SNP	CREB3	ENST00000353704	human	ensembl	70_37	+1	known	missense	c.710	p.S237F	1.000	NULL	pfam_bZIP,superfamily_Euk_TF_DNA-bd,smart_bZIP,pfscan_bZIP	-	no_errors	CREB3	HGNC
CTCF	10664	genome.wustl.edu	37	16	67645908	67645908	+	Missense_Mutation	SNP	C	C	T			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	16	67645908	67645908	C	T	SNP	CTCF	ENST00000264010	human	ensembl	70_37	+1	known	missense	c.836	p.S279L	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CTCF	HGNC
DNAJC14	85406	genome.wustl.edu	37	12	56221331	56221331	+	Missense_Mutation	SNP	G	G	A			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	12	56221331	56221331	G	A	SNP	DNAJC14	ENST00000317269	human	ensembl	70_37	-1	known	missense	c.1112	p.S371F	0.996	NULL	pfam_DnaJ_N,superfamily_DnaJ_N,smart_DnaJ_N,pfscan_DnaJ_N,prints_Hsp_DnaJ	-	no_errors	DNAJC14	HGNC
DUS3L	56931	genome.wustl.edu	37	19	5789395	5789395	+	Missense_Mutation	SNP	G	G	A			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	19	5789395	5789395	G	A	SNP	DUS3L	ENST00000590110	human	ensembl	70_37	-1	known	missense	c.521	p.P174L	0.000	NULL	NULL	-	no_errors	DUS3L	HGNC
ELAVL2	1993	genome.wustl.edu	37	9	23762091	23762091	+	Nonsense_Mutation	SNP	G	G	A			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	9	23762091	23762091	G	A	SNP	ELAVL2	ENST00000359598	human	ensembl	70_37	-1	known	nonsense	c.226	p.Q76*	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA,tigrfam_ELAD_HUD_SF	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA,tigrfam_ELAD_HUD_SF	-	no_errors	ELAVL2	HGNC
ENSG00000220161	0	genome.wustl.edu	37	17	18315314	18315314	+	RNA	SNP	C	C	T			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	17	18315314	18315314	C	T	SNP	ENSG00000220161	ENST00000407600	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.925	-	-	-	no_errors	RP1-37N7.3	Clone_based_vega_gene
ENSG00000222042	0	genome.wustl.edu	37	21	26541865	26541865	+	RNA	SNP	T	T	C			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	21	26541865	26541865	T	C	SNP	ENSG00000222042	ENST00000409758	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AP000233.4	Clone_based_vega_gene
ENSG00000229750	0	genome.wustl.edu	37	2	176032661	176032661	+	RNA	SNP	G	G	A			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	2	176032661	176032661	G	A	SNP	ENSG00000229750	ENST00000449168	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.977	-	-	-	no_errors	AC096649.2	Clone_based_vega_gene
ENSG00000251031	0	genome.wustl.edu	37	5	144608325	144608325	+	RNA	SNP	G	G	T			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	5	144608325	144608325	G	T	SNP	ENSG00000251031	ENST00000504204	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.414	-	-	-	no_errors	CTC-367F4.1	Clone_based_vega_gene
FAM155B	27112	genome.wustl.edu	37	X	68749616	68749616	+	Missense_Mutation	SNP	C	C	A			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	X	68749616	68749616	C	A	SNP	FAM155B	ENST00000252338	human	ensembl	70_37	+1	known	missense	c.1236	p.S412R	0.865	NULL	NULL	-	no_errors	FAM155B	HGNC
FAM174B	400451	genome.wustl.edu	37	15	93162638	93162638	+	Missense_Mutation	SNP	G	G	A			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	15	93162638	93162638	G	A	SNP	FAM174B	ENST00000555064	human	ensembl	70_37	-1	putative	missense	c.104	p.A35V	0.019	NULL	NULL	-	no_errors	FAM174B	HGNC
FAM174B	400451	genome.wustl.edu	37	15	93277233	93277233	+	RNA	SNP	C	C	T			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	15	93277233	93277233	C	T	SNP	FAM174B	ENST00000556424	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	FAM174B	HGNC
NUTM2D	728130	genome.wustl.edu	37	10	89125891	89125891	+	RNA	SNP	C	C	T			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	10	89125891	89125891	C	T	SNP	FAM22D	ENST00000465545	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	FAM22D	HGNC
FANCA	2175	genome.wustl.edu	37	16	89849269	89849269	+	Nonsense_Mutation	SNP	C	C	A			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	16	89849269	89849269	C	A	SNP	FANCA	ENST00000389301	human	ensembl	70_37	-1	known	nonsense	c.1624	p.E542*	0.306	NULL	pfam_Fanconia,prints_Fanconia	-	no_errors	FANCA	HGNC
FGF11	2256	genome.wustl.edu	37	17	7344828	7344828	+	Missense_Mutation	SNP	C	C	T			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	17	7344828	7344828	C	T	SNP	FGF11	ENST00000293829	human	ensembl	70_37	+1	known	missense	c.232	p.R78C	1.000	pfam_IL1_HBGF,superfamily_Cytokine_IL1-like,smart_IL1_HBGF,prints_GF_heparin-bd	pfam_IL1_HBGF,superfamily_Cytokine_IL1-like,smart_IL1_HBGF,prints_GF_heparin-bd,prints_IL1_HBGF	-	no_errors	FGF11	HGNC
FMN2	56776	genome.wustl.edu	37	1	240421305	240421305	+	Missense_Mutation	SNP	C	C	A			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	1	240421305	240421305	C	A	SNP	FMN2	ENST00000319653	human	ensembl	70_37	+1	known	missense	c.4126	p.H1376N	1.000	pfam_FH2_actin-bd,superfamily_FH2_actin-bd,smart_Actin-bd_FH2/DRF_autoreg	pfam_FH2_actin-bd,pfam_Formin_homology_1,superfamily_FH2_actin-bd,smart_Actin-bd_FH2/DRF_autoreg,pfscan_DEP_dom	-	no_errors	FMN2	HGNC
GNAT1	2779	genome.wustl.edu	37	3	50231284	50231284	+	Missense_Mutation	SNP	C	C	T			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	3	50231284	50231284	C	T	SNP	GNAT1	ENST00000232461	human	ensembl	70_37	+1	known	missense	c.548	p.T183M	0.991	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_I	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_I	-	no_errors	GNAT1	HGNC
GPR128	84873	genome.wustl.edu	37	3	100364821	100364821	+	Nonsense_Mutation	SNP	C	C	T			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	3	100364821	100364821	C	T	SNP	GPR128	ENST00000273352	human	ensembl	70_37	+1	known	nonsense	c.979	p.Q327*	1.000	NULL	pfam_GPCR_2_secretin-like,pfam_GPS_dom,smart_GPS_dom,prints_GPCR_2_secretin-like,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR128	HGNC
GSG2	83903	genome.wustl.edu	37	17	3629351	3629351	+	Missense_Mutation	SNP	G	G	C			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	17	3629351	3629351	G	C	SNP	GSG2	ENST00000325418	human	ensembl	70_37	+1	known	missense	c.2122	p.E708Q	0.305	pfam_DUF3635,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_cat_dom	pfam_DUF3635,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	GSG2	HGNC
HNRNPUL2	221092	genome.wustl.edu	37	11	62489768	62489768	+	Silent	SNP	G	G	A			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	11	62489768	62489768	G	A	SNP	HNRNPUL2	ENST00000301785	human	ensembl	70_37	-1	known	silent	c.1180	p.L394	0.957	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_SAP_DNA-bd,pfam_Zeta_toxin_domain,pfam_Chromatin_KTI12,superfamily_ConA-like_lec_gl_sf,smart_SAP_DNA-bd,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_SAP_DNA-bd	-	no_errors	HNRNPUL2	HGNC
HOXC8	3224	genome.wustl.edu	37	12	54405015	54405015	+	Silent	SNP	G	G	A			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	12	54405015	54405015	G	A	SNP	HOXC8	ENST00000040584	human	ensembl	70_37	+1	known	silent	c.579	p.V193	1.000	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,prints_Homeobox_metazoa,prints_HTH_motif	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,prints_Homeobox_metazoa,prints_HTH_motif	-	no_errors	HOXC8	HGNC
INCENP	3619	genome.wustl.edu	37	11	61906405	61906405	+	Missense_Mutation	SNP	G	G	A			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	11	61906405	61906405	G	A	SNP	INCENP	ENST00000394818	human	ensembl	70_37	+1	known	missense	c.1219	p.E407K	0.044	NULL	pfam_INCENP_N,pfam_Inner_centromere_prot_ARK-bd	-	no_errors	INCENP	HGNC
IRAK3	11213	genome.wustl.edu	37	12	66638954	66638954	+	Missense_Mutation	SNP	C	C	T			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	12	66638954	66638954	C	T	SNP	IRAK3	ENST00000261233	human	ensembl	70_37	+1	known	missense	c.1226	p.P409L	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Death,superfamily_Kinase-like_dom,superfamily_DEATH-like,smart_Death,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Death,pfscan_Prot_kinase_cat_dom	-	no_errors	IRAK3	HGNC
KCNJ8	3764	genome.wustl.edu	37	12	21919090	21919090	+	Missense_Mutation	SNP	G	G	A			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	12	21919090	21919090	G	A	SNP	KCNJ8	ENST00000240662	human	ensembl	70_37	-1	known	missense	c.842	p.S281L	1.000	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir6.1	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir6.1	-	no_errors	KCNJ8	HGNC
KDM3B	51780	genome.wustl.edu	37	5	137727474	137727474	+	Missense_Mutation	SNP	C	C	G			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	5	137727474	137727474	C	G	SNP	KDM3B	ENST00000314358	human	ensembl	70_37	+1	known	missense	c.2153	p.S718C	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	KDM3B	HGNC
KDM3B	51780	genome.wustl.edu	37	5	137727607	137727607	+	Silent	SNP	C	C	G			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	5	137727607	137727607	C	G	SNP	KDM3B	ENST00000314358	human	ensembl	70_37	+1	known	silent	c.2286	p.L762	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	KDM3B	HGNC
KDM3B	51780	genome.wustl.edu	37	5	137727650	137727650	+	Missense_Mutation	SNP	C	C	G			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	5	137727650	137727650	C	G	SNP	KDM3B	ENST00000314358	human	ensembl	70_37	+1	known	missense	c.2329	p.L777V	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	KDM3B	HGNC
KDM3B	51780	genome.wustl.edu	37	5	137727777	137727777	+	Nonsense_Mutation	SNP	C	C	G			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	5	137727777	137727777	C	G	SNP	KDM3B	ENST00000314358	human	ensembl	70_37	+1	known	nonsense	c.2456	p.S819*	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	KDM3B	HGNC
KTN1	3895	genome.wustl.edu	37	14	56106701	56106701	+	Missense_Mutation	SNP	A	A	T			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	14	56106701	56106701	A	T	SNP	KTN1	ENST00000395309	human	ensembl	70_37	+1	known	missense	c.1894	p.S632C	1.000	NULL	NULL	-	no_errors	KTN1	HGNC
LIFR-AS1	100506495	genome.wustl.edu	37	5	38557749	38557749	+	RNA	SNP	G	G	A			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	5	38557749	38557749	G	A	SNP	LIFR-AS1	ENST00000500733	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.058	-	-	-	no_errors	LIFR-AS1	HGNC
LPCAT2	54947	genome.wustl.edu	37	16	55562473	55562473	+	Nonsense_Mutation	SNP	C	C	T			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	16	55562473	55562473	C	T	SNP	LPCAT2	ENST00000262134	human	ensembl	70_37	+1	known	nonsense	c.496	p.R166*	0.625	pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase	pfam_EF-hand,pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase,smart_EF_hand_Ca-bd,pfscan_EF_HAND_2,prints_Recoverin	-	no_errors	LPCAT2	HGNC
LY9	4063	genome.wustl.edu	37	1	160784494	160784494	+	Missense_Mutation	SNP	G	G	A			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	1	160784494	160784494	G	A	SNP	LY9	ENST00000263285	human	ensembl	70_37	+1	known	missense	c.1015	p.V339M	0.007	smart_Ig_sub	smart_Ig_sub,pfscan_Ig-like	-	no_errors	LY9	HGNC
MIA2	117153	genome.wustl.edu	37	14	39722048	39722048	+	Missense_Mutation	SNP	C	C	T			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	14	39722048	39722048	C	T	SNP	MIA2	ENST00000280082	human	ensembl	70_37	+1	novel	missense	c.1664	p.S555L	0.003	NULL	pfam_SH3_2,superfamily_SH3_domain	-	no_errors	MIA2	HGNC
MIR137HG	400765	genome.wustl.edu	37	1	98515117	98515117	+	RNA	SNP	C	C	T			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	1	98515117	98515117	C	T	SNP	MIR137HG	ENST00000424528	human	ensembl	70_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR137HG	HGNC
MT-ND5	4540	genome.wustl.edu	37	MT	13267	13267	+	Nonsense_Mutation	SNP	G	G	A			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	MT	13267	13267	G	A	SNP	MT-ND5	ENST00000361567	human	ensembl	70_37	+1	known	nonsense	c.931	p.G311*	NULL	pfam_NADH_UbQ/plastoQ_OxRdtase,tigrfam_NADHpl_OxRdtase_5	pfam_NADH_UbQ/plastoQ_OxRdtase,pfam_NADH_DH_su5_C,pfam_NADH_UbQ_OxRdtase_chain5/L_N,tigrfam_NADHpl_OxRdtase_5	-	no_errors	MT-ND5	HGNC
MUC4	4585	genome.wustl.edu	37	3	195492148	195492148	+	Silent	SNP	G	G	A			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	3	195492148	195492148	G	A	SNP	MUC4	ENST00000463781	human	ensembl	70_37	-1	known	silent	c.13791	p.V4597	0.000	pfam_AMOP,smart_AMOP,pfscan_AMOP	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC
MUC4	4585	genome.wustl.edu	37	3	195506302	195506302	+	Missense_Mutation	SNP	G	G	T			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	3	195506302	195506302	G	T	SNP	MUC4	ENST00000463781	human	ensembl	70_37	-1	known	missense	c.12149	p.P4050H	0.021	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC
OR51J1	79470	genome.wustl.edu	37	11	5424626	5424626	+	Missense_Mutation	SNP	G	G	T			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	11	5424626	5424626	G	T	SNP	OR51J1	ENST00000332043	human	ensembl	70_37	+1	known	missense	c.800	p.G267V	0.890	pfscan_GPCR_Rhodpsn_7TM	pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	OR51J1	HGNC
PDE4C	5143	genome.wustl.edu	37	19	18331127	18331127	+	Silent	SNP	G	G	A			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	19	18331127	18331127	G	A	SNP	PDE4C	ENST00000355502	human	ensembl	70_37	-1	known	silent	c.711	p.F237	1.000	NULL	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE4C	HGNC
PHKA2	5256	genome.wustl.edu	37	X	18944619	18944619	+	Missense_Mutation	SNP	T	T	C			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	X	18944619	18944619	T	C	SNP	PHKA2	ENST00000379942	human	ensembl	70_37	-1	known	missense	c.1411	p.I471V	0.985	pfam_Glyco_hydro_15	pfam_Glyco_hydro_15,superfamily_6-hairpin_glycosidase-like	-	no_errors	PHKA2	HGNC
PIK3CA	5290	genome.wustl.edu	37	3	178936091	178936091	+	Missense_Mutation	SNP	G	G	A			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	3	178936091	178936091	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	70_37	+1	known	missense	c.1633	p.E545K	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC
PLEKHA1	59338	genome.wustl.edu	37	10	124187844	124187844	+	Missense_Mutation	SNP	G	G	A			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	10	124187844	124187844	G	A	SNP	PLEKHA1	ENST00000538022	human	ensembl	70_37	+1	known	missense	c.953	p.R318K	1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA1	HGNC
PLTP	5360	genome.wustl.edu	37	20	44540071	44540071	+	Silent	SNP	G	G	A			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	20	44540071	44540071	G	A	SNP	PLTP	ENST00000542937	human	ensembl	70_37	-1	known	silent	c.81	p.L27	0.266	NULL	pfam_Lipid-bd_serum_glycop_C,pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,smart_Lipid-bd_serum_glycop_C	-	no_errors	PLTP	HGNC
RASD2	23551	genome.wustl.edu	37	22	35947704	35947704	+	Silent	SNP	C	C	T			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	22	35947704	35947704	C	T	SNP	RASD2	ENST00000216127	human	ensembl	70_37	+1	known	silent	c.426	p.N142	0.809	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RASD2	HGNC
SLC10A3	8273	genome.wustl.edu	37	X	153716978	153716978	+	Missense_Mutation	SNP	G	G	A			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	X	153716978	153716978	G	A	SNP	SLC10A3	ENST00000263512	human	ensembl	70_37	-1	known	missense	c.302	p.P101L	0.000	NULL	pfam_BilAc/Na_symport,tigrfam_Bil_ac_transpt	-	no_errors	SLC10A3	HGNC
SLC37A3	84255	genome.wustl.edu	37	7	140051159	140051159	+	Missense_Mutation	SNP	T	T	G			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	7	140051159	140051159	T	G	SNP	SLC37A3	ENST00000326232	human	ensembl	70_37	-1	known	missense	c.796	p.N266H	0.872	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC37A3	HGNC
SLC44A1	23446	genome.wustl.edu	37	9	108147760	108147760	+	Missense_Mutation	SNP	G	G	C			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	9	108147760	108147760	G	C	SNP	SLC44A1	ENST00000374720	human	ensembl	70_37	+1	known	missense	c.1927	p.D643H	1.000	NULL	pfam_Choline_transptr-like	-	no_errors	SLC44A1	HGNC
SLX4	84464	genome.wustl.edu	37	16	3632683	3632683	+	Missense_Mutation	SNP	C	C	G			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	16	3632683	3632683	C	G	SNP	SLX4	ENST00000294008	human	ensembl	70_37	-1	known	missense	c.5165	p.C1722S	0.005	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	SLX4	HGNC
SRRD	402055	genome.wustl.edu	37	22	26887615	26887615	+	Missense_Mutation	SNP	G	G	A			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	22	26887615	26887615	G	A	SNP	SRRD	ENST00000215917	human	ensembl	70_37	+1	known	missense	c.997	p.E333K	0.000	NULL	pfam_SRR1-like	-	no_errors	SRRD	HGNC
ST7L	54879	genome.wustl.edu	37	1	113162416	113162416	+	RNA	SNP	C	C	T			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	1	113162416	113162416	C	T	SNP	ST7L	ENST00000492274	human	ensembl	70_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ST7L	HGNC
TBP	6908	genome.wustl.edu	37	6	170871052	170871053	+	Frame_Shift_Del	DEL	GC	GC	-			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	GC	GC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	6	170871052	170871053	GC	-	DEL	TBP	ENST00000230354	human	ensembl	70_37	+1	known	frame_shift_del	c.228_229	p.Q77fs	0.994:0.996	NULL	pfam_TBP,prints_TBP	-	no_errors	TBP	HGNC
TBP	6908	genome.wustl.edu	37	6	170871055	170871055	+	Frame_Shift_Del	DEL	G	G	-			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	6	170871055	170871055	G	-	DEL	TBP	ENST00000230354	human	ensembl	70_37	+1	known	frame_shift_del	c.231	p.Q77fs	0.993	NULL	pfam_TBP,prints_TBP	-	no_errors	TBP	HGNC
TET1	80312	genome.wustl.edu	37	10	70333214	70333215	+	Frame_Shift_Ins	INS	-	-	C			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	10	70333214	70333215	-	C	INS	TET1	ENST00000373644	human	ensembl	70_37	+1	known	frame_shift_ins	c.1119_1120	p.H373fs	0.725:0.713	NULL	pfam_Znf_CXXC,pfscan_Znf_CXXC	-	no_errors	TET1	HGNC
TMEM52B	120939	genome.wustl.edu	37	12	10339160	10339160	+	Silent	SNP	C	C	T			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	12	10339160	10339160	C	T	SNP	TMEM52B	ENST00000381923	human	ensembl	70_37	+1	known	silent	c.279	p.H93	0.903	NULL	NULL	-	no_errors	TMEM52B	HGNC
TNPO3	23534	genome.wustl.edu	37	7	128657089	128657089	+	Missense_Mutation	SNP	G	G	A			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	7	128657089	128657089	G	A	SNP	TNPO3	ENST00000393245	human	ensembl	70_37	-1	known	missense	c.343	p.L115F	1.000	pfam_Exportin-1/Importin-b-like,superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,superfamily_ARM-type_fold	-	no_errors	TNPO3	HGNC
TRIB2	28951	genome.wustl.edu	37	2	12880515	12880515	+	Silent	SNP	C	C	T			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	2	12880515	12880515	C	T	SNP	TRIB2	ENST00000155926	human	ensembl	70_37	+1	known	silent	c.627	p.L209	0.387	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	TRIB2	HGNC
TSC1	7248	genome.wustl.edu	37	9	135801121	135801121	+	Silent	SNP	G	G	C			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	9	135801121	135801121	G	C	SNP	TSC1	ENST00000298552	human	ensembl	70_37	-1	known	silent	c.216	p.L72	1.000	pfam_Hamartin,superfamily_ARM-type_fold	pfam_Hamartin,superfamily_ARM-type_fold	-	no_errors	TSC1	HGNC
TSKS	60385	genome.wustl.edu	37	19	50243366	50243366	+	Silent	SNP	G	G	A			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	19	50243366	50243366	G	A	SNP	TSKS	ENST00000246801	human	ensembl	70_37	-1	known	silent	c.1572	p.D524	1.000	NULL	NULL	-	no_errors	TSKS	HGNC
TTC6	319089	genome.wustl.edu	37	14	38220270	38220270	+	Missense_Mutation	SNP	C	C	T			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	14	38220270	38220270	C	T	SNP	TTC6	ENST00000553443	human	ensembl	70_37	+1	novel	missense	c.2969	p.S990L	1.000	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR-1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC6	HGNC
VARS	7407	genome.wustl.edu	37	6	31746941	31746941	+	Missense_Mutation	SNP	C	C	T			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	6	31746941	31746941	C	T	SNP	VARS	ENST00000375663	human	ensembl	70_37	-1	known	missense	c.3529	p.A1177T	1.000	superfamily_tRNAsynth_1a_anticodon-bd,tigrfam_Valyl-tRNA_ligase	pfam_aa-tRNA-synth_Ia,pfam_V/L/I-tRNA-synth_anticodon-bd,pfam_Glutathione_S-Trfase_N,pfam_Methionyl/Leucyl_tRNA_Synth,pfam_GST_C,superfamily_Val/Leu/Ile-tRNA-synth_edit,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Glutathione-S-Trfase_C-like,superfamily_tRNA-bd_arm,prints_Valyl-tRNA_ligase,tigrfam_Valyl-tRNA_ligase	-	no_errors	VARS	HGNC
VPRBP	9730	genome.wustl.edu	37	3	51457980	51457980	+	Missense_Mutation	SNP	C	C	T			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	3	51457980	51457980	C	T	SNP	VPRBP	ENST00000335891	human	ensembl	70_37	-1	known	missense	c.1097	p.R366Q	1.000	superfamily_ARM-type_fold	superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_LisH_dimerisation,pfscan_LisH_dimerisation	-	no_errors	VPRBP	HGNC
YES1	7525	genome.wustl.edu	37	18	742944	742944	+	Missense_Mutation	SNP	T	T	G			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	18	742944	742944	T	G	SNP	YES1	ENST00000314574	human	ensembl	70_37	-1	known	missense	c.1034	p.Y345S	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	YES1	HGNC
ZNF214	7761	genome.wustl.edu	37	11	7022682	7022682	+	Missense_Mutation	SNP	A	A	C			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	11	7022682	7022682	A	C	SNP	ZNF214	ENST00000278314	human	ensembl	70_37	-1	known	missense	c.232	p.Y78D	0.000	pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF214	HGNC
ZNF285	26974	genome.wustl.edu	37	19	44891043	44891043	+	Missense_Mutation	SNP	G	G	T			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	19	44891043	44891043	G	T	SNP	ZNF285	ENST00000330997	human	ensembl	70_37	-1	known	missense	c.1364	p.P455Q	0.995	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF285	HGNC
ZNF490	57474	genome.wustl.edu	37	19	12721468	12721468	+	Silent	SNP	G	G	A			TCGA-Q1-A5R1-01A-11D-A28B-09	TCGA-Q1-A5R1-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	43f1663d-29b7-4653-ac53-0b2a724ed57e	e9ae2a3c-f934-43a6-a00b-ea04105a5926	19	12721468	12721468	G	A	SNP	ZNF490	ENST00000311437	human	ensembl	70_37	-1	known	silent	c.27	p.F9	0.155	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF490	HGNC
