Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source
ALOX5	240	genome.wustl.edu	37	10	45939495	45939495	+	RNA	SNP	G	G	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	10	45939495	45939495	G	A	SNP	ALOX5	ENST00000498461	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ALOX5	HGNC
AP3D1	8943	genome.wustl.edu	37	19	2130441	2130441	+	Silent	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	19	2130441	2130441	G	T	SNP	AP3D1	ENST00000355272	human	ensembl	70_37	-1	known	silent	c.558	p.P186	0.971	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_complex_dsu	pfam_BLV_receptor,pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_complex_dsu	-	no_errors	AP3D1	HGNC
APOA1BP	128240	genome.wustl.edu	37	1	156563372	156563372	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	1	156563372	156563372	G	T	SNP	APOA1BP	ENST00000368233	human	ensembl	70_37	+1	known	missense	c.689	p.W230L	0.000	NULL	pfam_YjeF_N_dom,superfamily_YjeF_N_dom,tigrfam_YjeF_N_dom	-	no_errors	APOA1BP	HGNC
ARID5B	84159	genome.wustl.edu	37	10	63852202	63852202	+	Missense_Mutation	SNP	C	C	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	10	63852202	63852202	C	A	SNP	ARID5B	ENST00000279873	human	ensembl	70_37	+1	known	missense	c.2980	p.H994N	1.000	NULL	pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID5B	HGNC
ATP9B	374868	genome.wustl.edu	37	18	77107900	77107900	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	18	77107900	77107900	G	T	SNP	ATP9B	ENST00000426216	human	ensembl	70_37	+1	known	missense	c.2813	p.R938M	1.000	tigrfam_ATPase_P-typ_Plipid-transl,tigrfam_ATPase_P-typ_ion-transptr	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_Dehalogen-like_hydro,superfamily_HAD-like_dom,superfamily_ATPase_cation_domN,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_Plipid-transl,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP9B	HGNC
B3GALT1	8708	genome.wustl.edu	37	2	168725978	168725978	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	2	168725978	168725978	G	T	SNP	B3GALT1	ENST00000305861	human	ensembl	70_37	+1	known	missense	c.429	p.E143D	1.000	pfam_Glyco_trans_31	pfam_Glyco_trans_31	-	no_errors	B3GALT1	HGNC
BCL11A	53335	genome.wustl.edu	37	2	60686967	60686967	+	RNA	SNP	T	T	C			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	2	60686967	60686967	T	C	SNP	BCL11A	ENST00000477659	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.852	-	-	-	no_errors	BCL11A	HGNC
BUB3	9184	genome.wustl.edu	37	10	124914622	124914622	+	Silent	SNP	C	C	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	10	124914622	124914622	C	A	SNP	BUB3	ENST00000368865	human	ensembl	70_37	+1	known	silent	c.189	p.A63	0.408	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	BUB3	HGNC
BUD13	84811	genome.wustl.edu	37	11	116633813	116633813	+	Silent	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	11	116633813	116633813	G	T	SNP	BUD13	ENST00000260210	human	ensembl	70_37	-1	known	silent	c.492	p.P164	0.943	NULL	pfam_Bud13	-	no_errors	BUD13	HGNC
C1QTNF2	114898	genome.wustl.edu	37	5	159776635	159776635	+	Missense_Mutation	SNP	C	C	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	5	159776635	159776635	C	A	SNP	C1QTNF2	ENST00000393975	human	ensembl	70_37	-1	known	missense	c.533	p.G178V	1.000	pfam_Collagen	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QTNF2	HGNC
CACNG6	59285	genome.wustl.edu	37	19	54515286	54515286	+	Missense_Mutation	SNP	C	C	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	19	54515286	54515286	C	T	SNP	CACNG6	ENST00000252729	human	ensembl	70_37	+1	known	missense	c.626	p.P209L	0.000	NULL	prints_VDCC_g6su,prints_VDCC_gsu,prints_Claudin	-	no_errors	CACNG6	HGNC
CBS	875	genome.wustl.edu	37	21	44488649	44488649	+	Missense_Mutation	SNP	C	C	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	21	44488649	44488649	C	A	SNP	CBS	ENST00000398168	human	ensembl	70_37	-1	known	missense	c.286	p.G96W	0.173	pfam_Trp_syn_b_sub_like_PLP_eny_SF,superfamily_Trp_syn_b_sub_like_PLP_eny_SF,tigrfam_Cysta_beta_synth	pfam_Trp_syn_b_sub_like_PLP_eny_SF,pfam_Cysta_beta_synth_core,superfamily_Trp_syn_b_sub_like_PLP_eny_SF,smart_Cysta_beta_synth_core,tigrfam_Cysta_beta_synth	-	no_errors	CBS	HGNC
CDC42BPG	55561	genome.wustl.edu	37	11	64597491	64597491	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	11	64597491	64597491	G	T	SNP	CDC42BPG	ENST00000342711	human	ensembl	70_37	-1	known	missense	c.3419	p.P1140H	0.987	pfam_Citron,smart_Citron	pfam_Prot_kinase_cat_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Myotonic_dystrophy_kinase_coil,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,pfscan_PAK_box_Rho-bd,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom	-	no_errors	CDC42BPG	HGNC
CDK13	8621	genome.wustl.edu	37	7	40134004	40134004	+	Missense_Mutation	SNP	G	G	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	7	40134004	40134004	G	A	SNP	CDK13	ENST00000181839	human	ensembl	70_37	+1	known	missense	c.3964	p.D1322N	0.999	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	CDK13	HGNC
CEP70	80321	genome.wustl.edu	37	3	138256028	138256028	+	Missense_Mutation	SNP	C	C	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	3	138256028	138256028	C	A	SNP	CEP70	ENST00000264982	human	ensembl	70_37	-1	known	missense	c.627	p.L209F	1.000	NULL	pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	CEP70	HGNC
CMKLR1	1240	genome.wustl.edu	37	12	108686584	108686584	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	12	108686584	108686584	G	T	SNP	CMKLR1	ENST00000312143	human	ensembl	70_37	-1	known	missense	c.156	p.F52L	0.994	prints_GPCR_Rhodpsn,prints_ATII_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_DEZorph_rcpt,prints_GPCR_Rhodpsn,prints_Frt_met_rcpt,prints_Anphylx_rcpt,prints_ATII_rcpt	-	no_errors	CMKLR1	HGNC
CNTNAP2	26047	genome.wustl.edu	37	7	146829491	146829491	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	7	146829491	146829491	G	T	SNP	CNTNAP2	ENST00000361727	human	ensembl	70_37	+1	known	missense	c.1238	p.S413I	0.996	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,pfam_EG-like_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP2	HGNC
CPA5	93979	genome.wustl.edu	37	7	130008431	130008431	+	Missense_Mutation	SNP	C	C	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	7	130008431	130008431	C	A	SNP	CPA5	ENST00000355388	human	ensembl	70_37	+1	known	missense	c.1304	p.P435H	1.000	NULL	pfam_Peptidase_M14,pfam_Prot_inh_M14A,superfamily_Prot_inh_propept,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPA5	HGNC
CPED1	79974	genome.wustl.edu	37	7	120906364	120906364	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	7	120906364	120906364	G	T	SNP	CPED1	ENST00000310396	human	ensembl	70_37	+1	known	missense	c.2394	p.Q798H	1.000	NULL	NULL	-	no_errors	CPED1	HGNC
DEFB124	245937	genome.wustl.edu	37	20	30060720	30060721	+	RNA	INS	-	-	CA			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	20	30060720	30060721	-	CA	INS	DEFB124	ENST00000481595	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.259:0.435	-	-	-	no_errors	DEFB124	HGNC
DIRAS3	9077	genome.wustl.edu	37	1	68512899	68512899	+	Missense_Mutation	SNP	C	C	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	1	68512899	68512899	C	T	SNP	DIRAS3	ENST00000370981	human	ensembl	70_37	-1	known	missense	c.82	p.A28T	0.000	NULL	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	DIRAS3	HGNC
DNPEP	23549	genome.wustl.edu	37	2	220246294	220246294	+	Missense_Mutation	SNP	C	C	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	2	220246294	220246294	C	A	SNP	DNPEP	ENST00000273075	human	ensembl	70_37	-1	known	missense	c.1110	p.E370D	1.000	pfam_Peptidase_M18,pfam_Peptidase_M42	pfam_Peptidase_M18,pfam_Peptidase_M42,prints_Peptidase_M18	-	no_errors	DNPEP	HGNC
DPCR1	135656	genome.wustl.edu	37	6	30916512	30916512	+	Missense_Mutation	SNP	C	C	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	6	30916512	30916512	C	T	SNP	DPCR1	ENST00000462446	human	ensembl	70_37	+1	novel	missense	c.271	p.R91C	0.005	NULL	NULL	-	no_errors	DPCR1	HGNC
EDIL3	10085	genome.wustl.edu	37	5	83239278	83239278	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	5	83239278	83239278	G	T	SNP	EDIL3	ENST00000296591	human	ensembl	70_37	-1	known	missense	c.1403	p.T468K	1.000	pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	pfam_Coagulation_fac_5/8-C_type_dom,pfam_EG-like_dom,pfam_EGF_extracell,superfamily_Galactose-bd-like,smart_EGF-like_Ca-bd,smart_EG-like_dom,smart_Coagulation_fac_5/8-C_type_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	EDIL3	HGNC
EEF2K	29904	genome.wustl.edu	37	16	22268678	22268678	+	Silent	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	16	22268678	22268678	G	T	SNP	EEF2K	ENST00000263026	human	ensembl	70_37	+1	known	silent	c.873	p.T291	0.002	pfam_MHCK_EF2_kinase,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pirsf_Elongation_factor_2_kinase,pfscan_MHCK_EF2_kinase	pfam_MHCK_EF2_kinase,pfam_Sel1-like,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pirsf_Elongation_factor_2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	EEF2K	HGNC
ENSG00000224631	0	genome.wustl.edu	37	16	61089303	61089303	+	RNA	DEL	T	T	-			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	16	61089303	61089303	T	-	DEL	ENSG00000224631	ENST00000591758	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.051	-	-	-	no_errors	RP11-51O6.1	Clone_based_vega_gene
ENSG00000230880	0	genome.wustl.edu	37	1	142621471	142621471	+	RNA	SNP	G	G	C			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	1	142621471	142621471	G	C	SNP	ENSG00000230880	ENST00000412092	human	ensembl	70_37	+1	putative	rna	NULL	NULL	0.021	-	-	-	no_errors	AL583842.3	Clone_based_vega_gene
ENSG00000259660	0	genome.wustl.edu	37	15	102296221	102296221	+	RNA	SNP	G	G	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	15	102296221	102296221	G	A	SNP	ENSG00000259660	ENST00000561463	human	ensembl	70_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CTD-2611K5.6	Clone_based_vega_gene
ENTPD3	956	genome.wustl.edu	37	3	40457472	40457472	+	Missense_Mutation	SNP	C	C	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	3	40457472	40457472	C	A	SNP	ENTPD3	ENST00000301825	human	ensembl	70_37	+1	known	missense	c.739	p.L247M	0.999	pfam_GDA1_CD39_NTPase	pfam_GDA1_CD39_NTPase	-	no_errors	ENTPD3	HGNC
EPHA1	2041	genome.wustl.edu	37	7	143087514	143087514	+	RNA	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	7	143087514	143087514	G	T	SNP	EPHA1	ENST00000458129	human	ensembl	70_37	-1	putative	rna	NULL	NULL	0.001	-	-	-	no_errors	EPHA1	HGNC
EPN2	22905	genome.wustl.edu	37	17	19186471	19186471	+	Silent	SNP	C	C	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	17	19186471	19186471	C	T	SNP	EPN2	ENST00000314728	human	ensembl	70_37	+1	known	silent	c.39	p.I13	0.995	superfamily_ENTH_VHS,pfscan_Epsin-like_N	pfam_Epsin_dom_N,pfam_ANTH,superfamily_ENTH_VHS,smart_Epsin-like_N,smart_Ubiquitin-int_motif,pfscan_Epsin-like_N,pfscan_Ubiquitin-int_motif	-	no_errors	EPN2	HGNC
ETHE1	23474	genome.wustl.edu	37	19	44012071	44012071	+	Missense_Mutation	SNP	G	G	C			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	19	44012071	44012071	G	C	SNP	ETHE1	ENST00000600651	human	ensembl	70_37	-1	putative	missense	c.737	p.S246C	0.000	NULL	pfam_Beta-lactamas-like,smart_Beta-lactamas-like	-	no_errors	ETHE1	HGNC
AMER2	219287	genome.wustl.edu	37	13	25744029	25744029	+	Nonsense_Mutation	SNP	C	C	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	13	25744029	25744029	C	A	SNP	FAM123A	ENST00000515384	human	ensembl	70_37	-1	known	nonsense	c.1729	p.E577*	0.996	pfam_Uncharacterised_FAM123	pfam_Uncharacterised_FAM123	-	no_errors	FAM123A	HGNC
FAM27L	284123	genome.wustl.edu	37	17	21826336	21826336	+	RNA	SNP	C	C	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	17	21826336	21826336	C	T	SNP	FAM27L	ENST00000426869	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.016	-	-	-	no_errors	FAM27L	HGNC
FASTKD5	60493	genome.wustl.edu	37	20	3128327	3128327	+	Nonsense_Mutation	SNP	C	C	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	20	3128327	3128327	C	A	SNP	FASTKD5	ENST00000380266	human	ensembl	70_37	-1	known	nonsense	c.1390	p.E464*	1.000	pfam_FAST_Leu-rich	pfam_FAST_2,pfam_FAST_Leu-rich,pfam_RAP,smart_RAP	-	no_errors	FASTKD5	HGNC
FERMT1	55612	genome.wustl.edu	37	20	6057200	6057200	+	RNA	SNP	C	C	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	20	6057200	6057200	C	T	SNP	FERMT1	ENST00000478194	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FERMT1	HGNC
FGD3	89846	genome.wustl.edu	37	9	95797815	95797815	+	Missense_Mutation	SNP	C	C	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	9	95797815	95797815	C	A	SNP	FGD3	ENST00000337352	human	ensembl	70_37	+1	known	missense	c.2122	p.Q708K	0.000	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Znf_FYVE,superfamily_DH-domain,superfamily_Znf_FYVE_PHD,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD3	HGNC
FGD5	152273	genome.wustl.edu	37	3	14861277	14861277	+	Silent	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	3	14861277	14861277	G	T	SNP	FGD5	ENST00000285046	human	ensembl	70_37	+1	known	silent	c.699	p.S233	0.000	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Znf_FYVE,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD5	HGNC
FGF8	2253	genome.wustl.edu	37	10	103530218	103530218	+	Silent	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	10	103530218	103530218	G	T	SNP	FGF8	ENST00000320185	human	ensembl	70_37	-1	known	silent	c.603	p.V201	1.000	pfam_IL1_HBGF,superfamily_Cytokine_IL1-like,smart_IL1_HBGF	pfam_IL1_HBGF,superfamily_Cytokine_IL1-like,smart_IL1_HBGF,prints_IL1_HBGF	-	no_errors	FGF8	HGNC
FKBP10	60681	genome.wustl.edu	37	17	39975837	39975837	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	17	39975837	39975837	G	T	SNP	FKBP10	ENST00000321562	human	ensembl	70_37	+1	known	missense	c.973	p.G325W	1.000	pfam_PPIase_FKBP_dom,pfscan_PPIase_FKBP_dom	pfam_PPIase_FKBP_dom,smart_EF_hand_Ca-bd,pfscan_EF_HAND_2,pfscan_PPIase_FKBP_dom	-	no_errors	FKBP10	HGNC
FOCAD	54914	genome.wustl.edu	37	9	20929595	20929595	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	9	20929595	20929595	G	T	SNP	FOCAD	ENST00000338382	human	ensembl	70_37	+1	known	missense	c.3317	p.S1106I	1.000	superfamily_ARM-type_fold	pfam_DUF3028,pfam_DUF3730,superfamily_ARM-type_fold	-	no_errors	FOCAD	HGNC
GATAD1	57798	genome.wustl.edu	37	7	92083840	92083840	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	7	92083840	92083840	G	T	SNP	GATAD1	ENST00000287957	human	ensembl	70_37	+1	known	missense	c.460	p.V154F	1.000	NULL	pfam_Znf_GATA,pfscan_Znf_GATA	-	no_errors	GATAD1	HGNC
GPR179	440435	genome.wustl.edu	37	17	36484666	36484666	+	Nonsense_Mutation	SNP	C	C	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	17	36484666	36484666	C	A	SNP	GPR179	ENST00000342292	human	ensembl	70_37	-1	known	nonsense	c.4786	p.E1596*	1.000	NULL	pfam_GPCR_3_C,superfamily_Growth_fac_rcpt,pfscan_GPCR_3_C	-	no_errors	GPR179	HGNC
GPRC6A	222545	genome.wustl.edu	37	6	117128267	117128267	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	6	117128267	117128267	G	T	SNP	GPRC6A	ENST00000310357	human	ensembl	70_37	-1	known	missense	c.601	p.H201N	0.880	pfam_ANF_lig-bd_rcpt,prints_GPCR_3	pfam_GPCR_3_C,pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_9-Cys_dom,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_vmron_rcpt_2	-	no_errors	GPRC6A	HGNC
GTF2IRD1	9569	genome.wustl.edu	37	7	73927291	73927291	+	Silent	SNP	C	C	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	7	73927291	73927291	C	A	SNP	GTF2IRD1	ENST00000265755	human	ensembl	70_37	+1	known	silent	c.255	p.L85	1.000	pirsf_TF_II-I	pfam_GTF2I,superfamily_GTF2I,pirsf_TF_II-I,pfscan_GTF2I	-	no_errors	GTF2IRD1	HGNC
HECTD4	283450	genome.wustl.edu	37	12	112720970	112720970	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	12	112720970	112720970	G	T	SNP	HECTD4	ENST00000377560	human	ensembl	70_37	-1	known	missense	c.1040	p.T347K	1.000	NULL	pfam_HECT,superfamily_HECT,superfamily_ConA-like_lec_gl_sf,smart_HECT,pfscan_HECT	-	no_errors	HECTD4	HGNC
HECW1	23072	genome.wustl.edu	37	7	43484164	43484164	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	7	43484164	43484164	G	T	SNP	HECW1	ENST00000395891	human	ensembl	70_37	+1	known	missense	c.1393	p.G465C	0.053	NULL	pfam_HECT,pfam_WW_Rsp5_WWP,pfam_C2_Ca-dep,superfamily_HECT,superfamily_WW_Rsp5_WWP,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,smart_WW_Rsp5_WWP,smart_HECT,pfscan_HECT,pfscan_C2_membr_targeting,pfscan_WW_Rsp5_WWP	-	no_errors	HECW1	HGNC
HEPACAM2	253012	genome.wustl.edu	37	7	92825163	92825163	+	Frame_Shift_Del	DEL	G	G	-			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	7	92825163	92825163	G	-	DEL	HEPACAM2	ENST00000394468	human	ensembl	70_37	-1	known	frame_shift_del	c.1253	p.P418fs	1.000	NULL	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	HEPACAM2	HGNC
HERC2P4	100289574	genome.wustl.edu	37	16	32182511	32182511	+	RNA	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	16	32182511	32182511	G	T	SNP	HERC2P4	ENST00000564730	human	ensembl	70_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HERC2P4	HGNC
IFNGR2	3460	genome.wustl.edu	37	21	34799326	34799326	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	21	34799326	34799326	G	T	SNP	IFNGR2	ENST00000290219	human	ensembl	70_37	+1	known	missense	c.548	p.G183V	0.000	pfam_Interferon_alpha/beta_rcpt_bsu,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Interferon_alpha/beta_rcpt_bsu,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IFNGR2	HGNC
KBTBD4	55709	genome.wustl.edu	37	11	47599541	47599541	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	11	47599541	47599541	G	T	SNP	KBTBD4	ENST00000430070	human	ensembl	70_37	-1	known	missense	c.59	p.P20Q	0.994	NULL	pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_errors	KBTBD4	HGNC
KIAA1239	57495	genome.wustl.edu	37	4	37444950	37444950	+	Missense_Mutation	SNP	C	C	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	4	37444950	37444950	C	A	SNP	KIAA1239	ENST00000309447	human	ensembl	70_37	+1	known	missense	c.1340	p.P447Q	1.000	NULL	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	KIAA1239	HGNC
KIAA1731	85459	genome.wustl.edu	37	11	93431029	93431029	+	Missense_Mutation	SNP	G	G	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	11	93431029	93431029	G	A	SNP	KIAA1731	ENST00000411936	human	ensembl	70_37	+1	known	missense	c.2951	p.R984K	0.006	NULL	NULL	-	no_errors	KIAA1731	HGNC
LOC100131691	100131691	genome.wustl.edu	37	19	59084045	59084045	+	RNA	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	19	59084045	59084045	G	T	SNP	LOC100131691	ENST00000600534	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	AC016629.8	Clone_based_vega_gene
LOC284788	284788	genome.wustl.edu	37	20	22381260	22381260	+	RNA	SNP	C	C	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	20	22381260	22381260	C	A	SNP	LOC284788	ENST00000377121	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP5-1004I9.1	Clone_based_vega_gene
LYST	1130	genome.wustl.edu	37	1	235952024	235952024	+	Silent	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	1	235952024	235952024	G	T	SNP	LYST	ENST00000389793	human	ensembl	70_37	-1	known	silent	c.4665	p.P1555	0.191	superfamily_ARM-type_fold	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	LYST	HGNC
MAGEC2	51438	genome.wustl.edu	37	X	141290914	141290914	+	Missense_Mutation	SNP	C	C	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	X	141290914	141290914	C	T	SNP	MAGEC2	ENST00000247452	human	ensembl	70_37	-1	known	missense	c.860	p.R287Q	0.001	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEC2	HGNC
MAGED2	10916	genome.wustl.edu	37	X	54835684	54835684	+	RNA	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	X	54835684	54835684	G	T	SNP	MAGED2	ENST00000485483	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MAGED2	HGNC
MALAT1	378938	genome.wustl.edu	37	11	65273653	65273653	+	RNA	SNP	G	G	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	11	65273653	65273653	G	A	SNP	MALAT1	ENST00000534336	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	MALAT1	HGNC
MCRS1	10445	genome.wustl.edu	37	12	49953006	49953006	+	Silent	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	12	49953006	49953006	G	T	SNP	MCRS1	ENST00000357123	human	ensembl	70_37	-1	known	silent	c.1204	p.R402	1.000	pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	MCRS1	HGNC
METTL1	4234	genome.wustl.edu	37	12	58163158	58163158	+	Nonsense_Mutation	SNP	C	C	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	12	58163158	58163158	C	A	SNP	METTL1	ENST00000257848	human	ensembl	70_37	-1	known	nonsense	c.418	p.G140*	1.000	NULL	NULL	-	no_errors	METTL1	HGNC
MICALL1	85377	genome.wustl.edu	37	22	38313730	38313730	+	Silent	SNP	C	C	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	22	38313730	38313730	C	A	SNP	MICALL1	ENST00000215957	human	ensembl	70_37	+1	known	silent	c.354	p.P118	0.993	NULL	pfam_DUF3585,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Znf_LIM,superfamily_CH-domain,smart_CH-domain,smart_Znf_LIM,pfscan_CH-domain,pfscan_Znf_LIM	-	no_errors	MICALL1	HGNC
MIR3648	100500862	genome.wustl.edu	37	21	9825951	9825951	+	RNA	SNP	G	G	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	21	9825951	9825951	G	A	SNP	MIR3648	ENST00000581792	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.032	-	-	-	no_errors	MIR3648	HGNC
MRPL14	64928	genome.wustl.edu	37	6	44081737	44081737	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	6	44081737	44081737	G	T	SNP	MRPL14	ENST00000372014	human	ensembl	70_37	-1	known	missense	c.281	p.P94H	0.182	pfam_Ribosomal_L14b/L23e,superfamily_Ribosomal_L14_dom	pfam_Ribosomal_L14b/L23e,superfamily_Ribosomal_L14_dom	-	no_errors	MRPL14	HGNC
MUC16	94025	genome.wustl.edu	37	19	9090910	9090910	+	Missense_Mutation	SNP	G	G	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	19	9090910	9090910	G	A	SNP	MUC16	ENST00000397910	human	ensembl	70_37	-1	known	missense	c.905	p.S302L	0.005	NULL	pfam_SEA,smart_SEA,pfscan_SEA	-	no_errors	MUC16	HGNC
MUC4	4585	genome.wustl.edu	37	3	195507119	195507119	+	Missense_Mutation	SNP	G	G	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	3	195507119	195507119	G	A	SNP	MUC4	ENST00000463781	human	ensembl	70_37	-1	known	missense	c.11332	p.P3778S	0.296	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC
MUC4	4585	genome.wustl.edu	37	3	195508223	195508223	+	Missense_Mutation	SNP	G	G	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	3	195508223	195508223	G	A	SNP	MUC4	ENST00000463781	human	ensembl	70_37	-1	known	missense	c.10228	p.P3410S	0.005	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC
MUC4	4585	genome.wustl.edu	37	3	195508226	195508226	+	Missense_Mutation	SNP	G	G	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	3	195508226	195508226	G	A	SNP	MUC4	ENST00000463781	human	ensembl	70_37	-1	known	missense	c.10225	p.L3409F	0.009	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC
MUC4	4585	genome.wustl.edu	37	3	195512956	195512956	+	Nonsense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	3	195512956	195512956	G	T	SNP	MUC4	ENST00000463781	human	ensembl	70_37	-1	known	nonsense	c.5495	p.S1832*	0.963	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC
MUC4	4585	genome.wustl.edu	37	3	195515246	195515246	+	Missense_Mutation	SNP	G	G	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	3	195515246	195515246	G	A	SNP	MUC4	ENST00000463781	human	ensembl	70_37	-1	known	missense	c.3205	p.H1069Y	0.000	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC
MUC4	4585	genome.wustl.edu	37	3	195515821	195515821	+	Missense_Mutation	SNP	G	G	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	3	195515821	195515821	G	A	SNP	MUC4	ENST00000463781	human	ensembl	70_37	-1	known	missense	c.2630	p.S877F	0.001	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC
MUC4	4585	genome.wustl.edu	37	3	195517135	195517135	+	Missense_Mutation	SNP	G	G	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	3	195517135	195517135	G	A	SNP	MUC4	ENST00000463781	human	ensembl	70_37	-1	known	missense	c.1316	p.S439F	0.000	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC
MUC4	4585	genome.wustl.edu	37	3	195517631	195517631	+	Missense_Mutation	SNP	G	G	C			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	3	195517631	195517631	G	C	SNP	MUC4	ENST00000463781	human	ensembl	70_37	-1	known	missense	c.820	p.L274V	0.000	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC
MUC4	4585	genome.wustl.edu	37	3	195518150	195518150	+	Missense_Mutation	SNP	G	G	C			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	3	195518150	195518150	G	C	SNP	MUC4	ENST00000463781	human	ensembl	70_37	-1	known	missense	c.301	p.L101V	0.000	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC
MXRA5	25878	genome.wustl.edu	37	X	3242779	3242779	+	Missense_Mutation	SNP	C	C	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	X	3242779	3242779	C	A	SNP	MXRA5	ENST00000217939	human	ensembl	70_37	-1	known	missense	c.947	p.W316L	0.997	NULL	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	MXRA5	HGNC
NOS3	4846	genome.wustl.edu	37	7	150699020	150699020	+	Silent	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	7	150699020	150699020	G	T	SNP	NOS3	ENST00000297494	human	ensembl	70_37	+1	known	silent	c.1614	p.L538	1.000	pfam_Flavodoxin/NO_synth,pirsf_NOS_met,pfscan_Flavodoxin/NO_synth	pfam_NO_synthase_oxygenase_dom,pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,superfamily_NO_synthase_oxygenase_dom,superfamily_Riboflavin_synthase-like_b-brl,pirsf_NOS_met,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	NOS3	HGNC
NTNG1	22854	genome.wustl.edu	37	1	107866903	107866903	+	Splice_Site	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	1	107866903	107866903	G	T	SNP	NTNG1	ENST00000370068	human	ensembl	70_37	+1	known	splice_site	c.247-1	e2-1	1.000	-	-	-	no_errors	NTNG1	HGNC
NUGGC	389643	genome.wustl.edu	37	8	27884506	27884506	+	Missense_Mutation	SNP	C	C	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	8	27884506	27884506	C	A	SNP	NUGGC	ENST00000341513	human	ensembl	70_37	-1	known	missense	c.2218	p.G740W	0.642	NULL	pfam_Dynamin_GTPase	-	no_errors	NUGGC	HGNC
ODAM	54959	genome.wustl.edu	37	4	71063753	71063753	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	4	71063753	71063753	G	T	SNP	ODAM	ENST00000396094	human	ensembl	70_37	+1	known	missense	c.254	p.G85V	0.019	NULL	NULL	-	no_errors	ODAM	HGNC
OR6J1	79549	genome.wustl.edu	37	14	23103083	23103083	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	14	23103083	23103083	G	T	SNP	OR6J1	ENST00000540461	human	ensembl	70_37	-1	known	missense	c.634	p.L212I	0.029	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6J1	HGNC
OSBPL8	114882	genome.wustl.edu	37	12	76772318	76772318	+	Missense_Mutation	SNP	G	G	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	12	76772318	76772318	G	A	SNP	OSBPL8	ENST00000261183	human	ensembl	70_37	-1	known	missense	c.1643	p.S548F	1.000	pfam_Oxysterol-bd	pfam_Oxysterol-bd,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBPL8	HGNC
PDE6C	5146	genome.wustl.edu	37	10	95400710	95400710	+	Missense_Mutation	SNP	G	G	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	10	95400710	95400710	G	A	SNP	PDE6C	ENST00000371447	human	ensembl	70_37	+1	known	missense	c.1771	p.E591K	1.000	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE6C	HGNC
PIWIL2	55124	genome.wustl.edu	37	8	22171928	22171928	+	Missense_Mutation	SNP	C	C	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	8	22171928	22171928	C	A	SNP	PIWIL2	ENST00000356766	human	ensembl	70_37	+1	known	missense	c.2077	p.P693T	1.000	pfam_Piwi,superfamily_RNaseH-like_dom,smart_Piwi,pfscan_Piwi	pfam_Piwi,pfam_PAZ,superfamily_RNaseH-like_dom,superfamily_PAZ,smart_PAZ,smart_Piwi,pfscan_PAZ,pfscan_Piwi	-	no_errors	PIWIL2	HGNC
PMCHL1	5369	genome.wustl.edu	37	5	22143074	22143074	+	RNA	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	5	22143074	22143074	G	T	SNP	PMCHL1	ENST00000418902	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.021	-	-	-	no_errors	PMCHL1	HGNC
PMCHL1	5369	genome.wustl.edu	37	5	22144060	22144060	+	RNA	DEL	A	A	-			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	5	22144060	22144060	A	-	DEL	PMCHL1	ENST00000418902	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	PMCHL1	HGNC
PRDM5	11107	genome.wustl.edu	37	4	121702439	121702439	+	Silent	SNP	G	G	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	4	121702439	121702439	G	A	SNP	PRDM5	ENST00000264808	human	ensembl	70_37	-1	known	silent	c.1302	p.C434	0.993	smart_Znf_C2H2-like,pirsf_Znf_PRDM5,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_SET_dom,smart_Znf_C2H2-like,pirsf_Znf_PRDM5,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM5	HGNC
PROM1	8842	genome.wustl.edu	37	4	15995625	15995625	+	Missense_Mutation	SNP	A	A	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	4	15995625	15995625	A	T	SNP	PROM1	ENST00000447510	human	ensembl	70_37	-1	known	missense	c.1752	p.H584Q	0.018	pfam_Prominin	pfam_Prominin	-	no_errors	PROM1	HGNC
PTPRC	5788	genome.wustl.edu	37	1	198713197	198713197	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	1	198713197	198713197	G	T	SNP	PTPRC	ENST00000442510	human	ensembl	70_37	+1	known	missense	c.2712	p.L904F	1.000	pirsf_Leukocyte_common_ag,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pirsf_Leukocyte_common_ag,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Leukocyte_common_ag,pfam_PTP_recept_N,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRC	HGNC
RABGAP1	23637	genome.wustl.edu	37	9	125860125	125860125	+	Splice_Site	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	9	125860125	125860125	G	T	SNP	RABGAP1	ENST00000373647	human	ensembl	70_37	+1	known	splice_site	c.2733+1	e21+1	1.000	-	-	-	no_errors	RABGAP1	HGNC
RAET1E	135250	genome.wustl.edu	37	6	150205624	150205624	+	Nonstop_Mutation	SNP	C	C	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	6	150205624	150205624	C	A	SNP	RAET1E	ENST00000532335	human	ensembl	70_37	-1	known	nonstop	c.639	p.*213Y	0.001	NULL	pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog	-	no_errors	RAET1E	HGNC
RIC3	79608	genome.wustl.edu	37	11	8159966	8159967	+	RNA	INS	-	-	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	11	8159966	8159967	-	A	INS	RIC3	ENST00000524799	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RIC3	HGNC
RNF157	114804	genome.wustl.edu	37	17	74158698	74158698	+	Missense_Mutation	SNP	C	C	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	17	74158698	74158698	C	A	SNP	RNF157	ENST00000269391	human	ensembl	70_37	-1	known	missense	c.727	p.G243W	1.000	NULL	smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF157	HGNC
ROBO2	6092	genome.wustl.edu	37	3	77147203	77147203	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	3	77147203	77147203	G	T	SNP	ROBO2	ENST00000461745	human	ensembl	70_37	+1	known	missense	c.100	p.V34L	1.000	pfam_Ig_I-set,pfscan_Ig-like	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	ROBO2	HGNC
RPL13P5	283345	genome.wustl.edu	37	12	6993598	6993598	+	RNA	SNP	G	G	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	12	6993598	6993598	G	A	SNP	RPL13P5	ENST00000412023	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	RPL13P5	HGNC
RPS10P7	376693	genome.wustl.edu	37	1	201489719	201489719	+	RNA	DEL	A	A	-			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	1	201489719	201489719	A	-	DEL	RPS10P7	ENST00000441932	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.056	-	-	-	no_errors	RPS10P7	HGNC
RTF1	23168	genome.wustl.edu	37	15	41745177	41745177	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	15	41745177	41745177	G	T	SNP	RTF1	ENST00000389629	human	ensembl	70_37	+1	known	missense	c.388	p.A130S	0.953	NULL	pfam_Plus-3,smart_Plus3-dom_subgr	-	no_errors	RTF1	HGNC
RYR2	6262	genome.wustl.edu	37	1	237819136	237819136	+	Missense_Mutation	SNP	C	C	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	1	237819136	237819136	C	T	SNP	RYR2	ENST00000360064	human	ensembl	70_37	+1	known	missense	c.7975	p.L2659F	1.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_HAND_2,pfscan_MIR_motif	-	no_errors	RYR2	HGNC
SHISA6	388336	genome.wustl.edu	37	17	11144958	11144958	+	Silent	SNP	G	G	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	17	11144958	11144958	G	A	SNP	SHISA6	ENST00000441885	human	ensembl	70_37	+1	known	silent	c.219	p.R73	0.943	NULL	NULL	-	no_errors	SHISA6	HGNC
SLC30A3	7781	genome.wustl.edu	37	2	27485720	27485720	+	Frame_Shift_Del	DEL	G	G	-			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	2	27485720	27485720	G	-	DEL	SLC30A3	ENST00000233535	human	ensembl	70_37	-1	known	frame_shift_del	c.55	p.R19fs	1.000	NULL	pfam_Cation_efflux,tigrfam_Cation_efflux	-	no_errors	SLC30A3	HGNC
SNAP91	9892	genome.wustl.edu	37	6	84270627	84270627	+	Missense_Mutation	SNP	C	C	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	6	84270627	84270627	C	T	SNP	SNAP91	ENST00000369694	human	ensembl	70_37	-1	known	missense	c.2482	p.A828T	0.037	NULL	pfam_ANTH,pfam_Epsin_dom_N,superfamily_ENTH_VHS,smart_Epsin-like_N,pfscan_Epsin-like_N	-	no_errors	SNAP91	HGNC
SNX18	112574	genome.wustl.edu	37	5	53815271	53815271	+	Nonsense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	5	53815271	53815271	G	T	SNP	SNX18	ENST00000326277	human	ensembl	70_37	+1	known	nonsense	c.1489	p.G497*	1.000	pfam_Sorting_nexin_WASP-bd-dom,pirsf_Snx9	pfam_Sorting_nexin_WASP-bd-dom,pfam_Phox,pfam_SH3_domain,pfam_SH3_2,superfamily_Phox,superfamily_SH3_domain,smart_SH3_domain,smart_Phox,pirsf_Snx9,pfscan_Phox,pfscan_SH3_domain	-	no_errors	SNX18	HGNC
SNX8	29886	genome.wustl.edu	37	7	2317747	2317747	+	Missense_Mutation	SNP	C	C	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	7	2317747	2317747	C	A	SNP	SNX8	ENST00000222990	human	ensembl	70_37	-1	known	missense	c.288	p.E96D	1.000	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	SNX8	HGNC
SPTY2D1	144108	genome.wustl.edu	37	11	18636763	18636763	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	11	18636763	18636763	G	T	SNP	SPTY2D1	ENST00000336349	human	ensembl	70_37	-1	known	missense	c.1058	p.P353H	1.000	NULL	pfam_Chromatin_SPT2,smart_Chromatin_SPT2	-	no_errors	SPTY2D1	HGNC
TBC1D25	4943	genome.wustl.edu	37	X	48419230	48419230	+	Missense_Mutation	SNP	T	T	G			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	X	48419230	48419230	T	G	SNP	TBC1D25	ENST00000376771	human	ensembl	70_37	+1	known	missense	c.1934	p.M645R	1.000	superfamily_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D25	HGNC
TMC6	11322	genome.wustl.edu	37	17	76115098	76115098	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	17	76115098	76115098	G	T	SNP	TMC6	ENST00000322914	human	ensembl	70_37	-1	known	missense	c.1841	p.P614H	1.000	pfam_TMC	pfam_TMC	-	no_errors	TMC6	HGNC
TMEM38A	79041	genome.wustl.edu	37	19	16790905	16790905	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	19	16790905	16790905	G	T	SNP	TMEM38A	ENST00000187762	human	ensembl	70_37	+1	known	missense	c.235	p.D79Y	1.000	pfam_TRIC_channel	pfam_TRIC_channel	-	no_errors	TMEM38A	HGNC
TNS1	7145	genome.wustl.edu	37	2	218750487	218750487	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	2	218750487	218750487	G	T	SNP	TNS1	ENST00000171887	human	ensembl	70_37	-1	known	missense	c.721	p.L241I	1.000	pfam_Tensin_phosphatase_C2-dom,superfamily_C2_Ca/lipid-bd_dom_CaLB,pfscan_Tensin_phosphatase_C2-dom	pfam_PTB,pfam_Tensin_phosphatase_C2-dom,pfam_SH2,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Tyr_Pase_cat,smart_SH2,smart_PTyr_interaction_dom,pfscan_SH2,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TNS1	HGNC
TRAF7	84231	genome.wustl.edu	37	16	2225135	2225135	+	Missense_Mutation	SNP	C	C	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	16	2225135	2225135	C	T	SNP	TRAF7	ENST00000326181	human	ensembl	70_37	+1	known	missense	c.1370	p.A457V	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_TRAF-like,smart_Znf_RING,smart_WD40_repeat,pfscan_Znf_RING,pfscan_Znf_TRAF,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	TRAF7	HGNC
TRHDE-AS1	283392	genome.wustl.edu	37	12	72666010	72666010	+	RNA	SNP	C	C	G			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	12	72666010	72666010	C	G	SNP	TRHDE-AS1	ENST00000435350	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TRHDE-AS1	HGNC
TRIM5	85363	genome.wustl.edu	37	11	5686913	5686913	+	Splice_Site	SNP	C	C	G			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	11	5686913	5686913	C	G	SNP	TRIM5	ENST00000305836	human	ensembl	70_37	-1	known	splice_site	c.869-1	e6-1	0.872	-	-	-	no_errors	TRIM5	HGNC
TRO	7216	genome.wustl.edu	37	X	54949050	54949050	+	Missense_Mutation	SNP	C	C	G			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	X	54949050	54949050	C	G	SNP	TRO	ENST00000173898	human	ensembl	70_37	+1	known	missense	c.85	p.P29A	0.013	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	TRO	HGNC
TTN	7273	genome.wustl.edu	37	2	179441279	179441279	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	2	179441279	179441279	G	T	SNP	TTN	ENST00000342992	human	ensembl	70_37	-1	known	missense	c.61988	p.S20663Y	1.000	superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC
TTN	7273	genome.wustl.edu	37	2	179528588	179528588	+	Missense_Mutation	SNP	G	G	C			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	2	179528588	179528588	G	C	SNP	TTN	ENST00000589042	human	ensembl	70_37	-1	putative	missense	c.36406	p.P12136A	0.000	superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_PPAK_motif,pfam_Titin_Z,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,superfamily_ARM-type_fold,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC
UBAP2L	9898	genome.wustl.edu	37	1	154223747	154223747	+	Nonsense_Mutation	SNP	C	C	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	1	154223747	154223747	C	T	SNP	UBAP2L	ENST00000361546	human	ensembl	70_37	+1	known	nonsense	c.1444	p.Q482*	1.000	NULL	pfam_DUF3697_Uba2,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	UBAP2L	HGNC
UGT8	7368	genome.wustl.edu	37	4	115544657	115544657	+	Silent	SNP	C	C	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	4	115544657	115544657	C	A	SNP	UGT8	ENST00000310836	human	ensembl	70_37	+1	known	silent	c.621	p.V207	1.000	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT8	HGNC
USP47	55031	genome.wustl.edu	37	11	11964023	11964023	+	Missense_Mutation	SNP	A	A	G			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	11	11964023	11964023	A	G	SNP	USP47	ENST00000399455	human	ensembl	70_37	+1	known	missense	c.2515	p.R839G	1.000	NULL	pfam_Peptidase_C19,pfscan_Peptidase_C19	-	no_errors	USP47	HGNC
UVRAG	7405	genome.wustl.edu	37	11	75672544	75672544	+	Missense_Mutation	SNP	G	G	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	11	75672544	75672544	G	A	SNP	UVRAG	ENST00000356136	human	ensembl	70_37	+1	known	missense	c.650	p.G217E	1.000	NULL	pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep	-	no_errors	UVRAG	HGNC
WDR81	124997	genome.wustl.edu	37	17	1629270	1629270	+	Silent	SNP	C	C	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	17	1629270	1629270	C	A	SNP	WDR81	ENST00000409644	human	ensembl	70_37	+1	known	silent	c.1017	p.P339	0.001	pfscan_BEACH_dom	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_Kinase-like_dom,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR81	HGNC
WNT8B	7479	genome.wustl.edu	37	10	102222993	102222993	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	10	102222993	102222993	G	T	SNP	WNT8B	ENST00000343737	human	ensembl	70_37	+1	known	missense	c.68	p.W23L	1.000	smart_Wnt	pfam_Wnt,smart_Wnt,prints_Wnt,prints_Wnt8	-	no_errors	WNT8B	HGNC
ZFYVE27	118813	genome.wustl.edu	37	10	99516960	99516960	+	RNA	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	10	99516960	99516960	G	T	SNP	ZFYVE27	ENST00000477521	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.009	-	-	-	no_errors	ZFYVE27	HGNC
ZFYVE28	57732	genome.wustl.edu	37	4	2306606	2306606	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	4	2306606	2306606	G	T	SNP	ZFYVE28	ENST00000290974	human	ensembl	70_37	-1	known	missense	c.1461	p.H487Q	0.994	NULL	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE28	HGNC
ZNF169	169841	genome.wustl.edu	37	9	97062730	97062730	+	Missense_Mutation	SNP	G	G	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	9	97062730	97062730	G	A	SNP	ZNF169	ENST00000395395	human	ensembl	70_37	+1	known	missense	c.890	p.R297Q	0.030	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF169	HGNC
ZNF202	7753	genome.wustl.edu	37	11	123599867	123599867	+	Silent	SNP	T	T	C			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	11	123599867	123599867	T	C	SNP	ZNF202	ENST00000336139	human	ensembl	70_37	-1	known	silent	c.669	p.S223	0.029	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF202	HGNC
ZNF202	7753	genome.wustl.edu	37	11	123600469	123600469	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	11	123600469	123600469	G	T	SNP	ZNF202	ENST00000336139	human	ensembl	70_37	-1	known	missense	c.467	p.P156H	0.019	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF202	HGNC
ZNF300	91975	genome.wustl.edu	37	5	150277689	150277689	+	Missense_Mutation	SNP	C	C	A			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	5	150277689	150277689	C	A	SNP	ZNF300	ENST00000446148	human	ensembl	70_37	-1	known	missense	c.248	p.W83L	1.000	smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF300	HGNC
ZNF76	7629	genome.wustl.edu	37	6	35259070	35259070	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	6	35259070	35259070	G	T	SNP	ZNF76	ENST00000373953	human	ensembl	70_37	+1	known	missense	c.641	p.S214I	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF76	HGNC
ZSWIM4	65249	genome.wustl.edu	37	19	13936364	13936364	+	Missense_Mutation	SNP	G	G	T			TCGA-RA-A741-01A-11D-A33O-09	TCGA-RA-A741-10B-01D-A33O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	adc6fd47-b5a4-4db3-8431-0f1f6ec4b808	24106164-fe83-4734-ada3-bc3f28c07452	19	13936364	13936364	G	T	SNP	ZSWIM4	ENST00000254323	human	ensembl	70_37	+1	known	missense	c.1865	p.G622V	1.000	NULL	pfscan_Znf_SWIM	-	no_errors	ZSWIM4	HGNC
