Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source
ABL1	25	genome.wustl.edu	37	9	133760373	133760373	+	Missense_Mutation	SNP	C	C	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	9	133760373	133760373	C	T	SNP	ABL1	ENST00000372348	human	ensembl	70_37	+1	known	missense	c.2753	p.P918L	0.999	NULL	pfam_F-actin_binding,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_F-actin_binding,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	ABL1	HGNC
ACVR2A	92	genome.wustl.edu	37	2	148676157	148676157	+	Missense_Mutation	SNP	C	C	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	2	148676157	148676157	C	T	SNP	ACVR2A	ENST00000241416	human	ensembl	70_37	+1	known	missense	c.958	p.H320Y	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Activin_II/TGFBeta-II_recpt	-	no_errors	ACVR2A	HGNC
ADAM21P1	145241	genome.wustl.edu	37	14	70714259	70714259	+	RNA	SNP	A	A	G			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	14	70714259	70714259	A	G	SNP	ADAM21P1	ENST00000530196	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	ADAM21P1	HGNC
AGBL4	84871	genome.wustl.edu	37	1	49511375	49511375	+	Missense_Mutation	SNP	C	C	A			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	1	49511375	49511375	C	A	SNP	AGBL4	ENST00000371839	human	ensembl	70_37	-1	known	missense	c.475	p.D159Y	1.000	NULL	pfam_Peptidase_M14,smart_Peptidase_M14	-	no_errors	AGBL4	HGNC
ALMS1	7840	genome.wustl.edu	37	2	73659359	73659359	+	Missense_Mutation	SNP	C	C	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	2	73659359	73659359	C	T	SNP	ALMS1	ENST00000264448	human	ensembl	70_37	+1	known	missense	c.1372	p.L458F	1.000	NULL	NULL	-	no_errors	ALMS1	HGNC
APOB	338	genome.wustl.edu	37	2	21231445	21231445	+	Missense_Mutation	SNP	T	T	A			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	2	21231445	21231445	T	A	SNP	APOB	ENST00000233242	human	ensembl	70_37	-1	known	missense	c.8295	p.Q2765H	0.002	NULL	pfam_Lipid_transpt_N,pfam_Vitellinogen_open_b-sht,pfam_ApoB100_C,pfam_Lipid_transpt_open_b-sht,superfamily_Lipid_transp_b-sht_shell,superfamily_Vitellinogen_superhlx,superfamily_ARM-type_fold,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	APOB	HGNC
APPBP2	10513	genome.wustl.edu	37	17	58524959	58524959	+	Missense_Mutation	SNP	C	C	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	17	58524959	58524959	C	T	SNP	APPBP2	ENST00000083182	human	ensembl	70_37	-1	known	missense	c.1741	p.E581K	0.993	NULL	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	APPBP2	HGNC
ARMC7	79637	genome.wustl.edu	37	17	73125203	73125203	+	RNA	SNP	C	C	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	17	73125203	73125203	C	T	SNP	ARMC7	ENST00000579096	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	ARMC7	HGNC
ASH1L	55870	genome.wustl.edu	37	1	155340568	155340568	+	Missense_Mutation	SNP	C	C	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	1	155340568	155340568	C	T	SNP	ASH1L	ENST00000368346	human	ensembl	70_37	-1	known	missense	c.6554	p.R2185K	1.000	pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	pfam_SET_dom,pfam_BAH_dom,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_AT_hook_DNA-bd_motif,smart_AWS,smart_SET_dom,smart_Bromodomain,smart_Znf_PHD,smart_BAH_dom,pfscan_AWS,pfscan_BAH_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Bromodomain	-	no_errors	ASH1L	HGNC
ATP10A	57194	genome.wustl.edu	37	15	25966967	25966967	+	Silent	SNP	G	G	A			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	15	25966967	25966967	G	A	SNP	ATP10A	ENST00000356865	human	ensembl	70_37	-1	known	silent	c.1200	p.D400	0.300	tigrfam_ATPase_P-typ_Plipid-transl,tigrfam_ATPase_P-typ_ion-transptr	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_Dehalogen-like_hydro,superfamily_HAD-like_dom,superfamily_ATPase_cation_domN,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_Plipid-transl,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP10A	HGNC
BAP1	8314	genome.wustl.edu	37	3	52439883	52439883	+	Nonsense_Mutation	SNP	G	G	A			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	3	52439883	52439883	G	A	SNP	BAP1	ENST00000460680	human	ensembl	70_37	-1	known	nonsense	c.829	p.Q277*	1.000	NULL	pfam_Peptidase_C12,prints_Peptidase_C12	-	no_errors	BAP1	HGNC
CACNA1F	778	genome.wustl.edu	37	X	49072951	49072951	+	Missense_Mutation	SNP	G	G	A			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	X	49072951	49072951	G	A	SNP	CACNA1F	ENST00000376265	human	ensembl	70_37	-1	known	missense	c.3160	p.R1054W	0.998	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_L_a1su	-	no_errors	CACNA1F	HGNC
CASP10	843	genome.wustl.edu	37	2	202060612	202060612	+	Missense_Mutation	SNP	C	C	G			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	2	202060612	202060612	C	G	SNP	CASP10	ENST00000286186	human	ensembl	70_37	+1	known	missense	c.625	p.Q209E	0.001	NULL	pfam_Pept_C14_cat,pfam_DED,superfamily_DEATH-like,smart_DED,smart_Pept_C14_p45_core,pfscan_DED,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14_p45_core	-	no_errors	CASP10	HGNC
CBX3	11335	genome.wustl.edu	37	7	26242433	26242433	+	RNA	SNP	C	C	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	7	26242433	26242433	C	T	SNP	CBX3	ENST00000497498	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CBX3	HGNC
CEL	1056	genome.wustl.edu	37	9	135945997	135945997	+	Missense_Mutation	SNP	C	C	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	9	135945997	135945997	C	T	SNP	CEL	ENST00000372080	human	ensembl	70_37	+1	known	missense	c.1445	p.T482I	0.994	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3	-	no_errors	CEL	HGNC
DDX11L9	100288486	genome.wustl.edu	37	15	102516816	102516816	+	RNA	SNP	G	G	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	15	102516816	102516816	G	T	SNP	DDX11L9	ENST00000559159	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DDX11L9	HGNC
DGKH	160851	genome.wustl.edu	37	13	42773749	42773749	+	Missense_Mutation	SNP	G	G	C			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	13	42773749	42773749	G	C	SNP	DGKH	ENST00000337343	human	ensembl	70_37	+1	known	missense	c.2333	p.G778A	1.000	pfam_Diacylglycerol_kin_accessory,smart_Diacylglycerol_kin_accessory	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Pleckstrin_homology,pfam_SAM_2,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_SAM_type1,superfamily_SAM/pointed,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,smart_SAM,pfscan_Pleckstrin_homology,pfscan_SAM,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKH	HGNC
DLEU7	220107	genome.wustl.edu	37	13	51287267	51287267	+	RNA	SNP	C	C	A			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	13	51287267	51287267	C	A	SNP	DLEU7	ENST00000443723	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.123	-	-	-	no_errors	DLEU7	HGNC
ENSG00000212045	0	genome.wustl.edu	37	4	29751861	29751861	+	RNA	DEL	A	A	-			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	4	29751861	29751861	A	-	DEL	ENSG00000212045	ENST00000390756	human	ensembl	70_37	+1	novel	rna	NULL	NULL	1.000	-	-	-	no_errors	AC109351.1	Clone_based_ensembl_gene
ENSG00000236233	0	genome.wustl.edu	37	9	67793515	67793515	+	RNA	SNP	C	C	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	9	67793515	67793515	C	T	SNP	ENSG00000236233	ENST00000315762	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.026	-	-	-	no_errors	RP11-12A20.7	Clone_based_vega_gene
ENSG00000259468	0	genome.wustl.edu	37	15	34549807	34549807	+	RNA	SNP	G	G	A			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	15	34549807	34549807	G	A	SNP	ENSG00000259468	ENST00000559867	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-1084A12.2	Clone_based_vega_gene
ENSG00000269553	0	genome.wustl.edu	37	19	35822749	35822750	+	RNA	INS	-	-	A			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	19	35822749	35822750	-	A	INS	ENSG00000269553	ENST00000597110	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	U62631.5	Clone_based_vega_gene
FAM73B	84895	genome.wustl.edu	37	9	131804535	131804535	+	RNA	SNP	G	G	A			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	9	131804535	131804535	G	A	SNP	FAM73B	ENST00000477088	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FAM73B	HGNC
FAM83E	54854	genome.wustl.edu	37	19	49114031	49114031	+	Missense_Mutation	SNP	C	C	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	19	49114031	49114031	C	T	SNP	FAM83E	ENST00000263266	human	ensembl	70_37	-1	known	missense	c.539	p.R180H	1.000	pfam_DUF1669	pfam_DUF1669,superfamily_Acyl_CoA_acyltransferase	-	no_errors	FAM83E	HGNC
FARP2	9855	genome.wustl.edu	37	2	242430486	242430486	+	Nonsense_Mutation	SNP	G	G	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	2	242430486	242430486	G	T	SNP	FARP2	ENST00000264042	human	ensembl	70_37	+1	known	nonsense	c.2515	p.E839*	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_FERM_PH-like_C,pfam_FERM_N,pfam_FERM_central,pfam_FERM-adjacent,superfamily_DH-domain,superfamily_FERM_central,smart_Band_41_domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_FERM_domain,pfscan_Pleckstrin_homology,pfscan_DH-domain,prints_Band_41_fam,prints_Ez/rad/moesin	-	no_errors	FARP2	HGNC
FCRL3	115352	genome.wustl.edu	37	1	157665960	157665960	+	Missense_Mutation	SNP	C	C	G			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	1	157665960	157665960	C	G	SNP	FCRL3	ENST00000368186	human	ensembl	70_37	-1	known	missense	c.1002	p.K334N	0.024	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	FCRL3	HGNC
FERMT1	55612	genome.wustl.edu	37	20	6060088	6060088	+	Missense_Mutation	SNP	G	G	A			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	20	6060088	6060088	G	A	SNP	FERMT1	ENST00000217289	human	ensembl	70_37	-1	known	missense	c.1855	p.R619W	1.000	NULL	pfam_FERM_central,pfam_FERM_N,superfamily_FERM_central,smart_Band_41_domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	FERMT1	HGNC
FGD1	2245	genome.wustl.edu	37	X	54472598	54472598	+	Missense_Mutation	SNP	C	C	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	X	54472598	54472598	C	T	SNP	FGD1	ENST00000375135	human	ensembl	70_37	-1	known	missense	c.2830	p.A944T	0.001	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Znf_FYVE,superfamily_DH-domain,superfamily_Znf_FYVE_PHD,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD1	HGNC
FLT4	2324	genome.wustl.edu	37	5	180041165	180041165	+	Silent	SNP	C	C	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	5	180041165	180041165	C	T	SNP	FLT4	ENST00000261937	human	ensembl	70_37	-1	known	silent	c.3234	p.L1078	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,prints_Tyr_kinase_VEGFR3_rcpt_N,prints_Tyr_kinase_VEGFR_rcpt_N	-	no_errors	FLT4	HGNC
FSCB	84075	genome.wustl.edu	37	14	44975706	44975706	+	Nonsense_Mutation	SNP	G	G	C			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	14	44975706	44975706	G	C	SNP	FSCB	ENST00000340446	human	ensembl	70_37	-1	known	nonsense	c.485	p.S162*	0.043	NULL	NULL	-	no_errors	FSCB	HGNC
FSIP2	401024	genome.wustl.edu	37	2	186670383	186670383	+	Silent	SNP	T	T	C			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	2	186670383	186670383	T	C	SNP	FSIP2	ENST00000343098	human	ensembl	70_37	+1	known	silent	c.16617	p.S5539	0.003	NULL	NULL	-	no_errors	FSIP2	HGNC
GRB7	2886	genome.wustl.edu	37	17	37899685	37899685	+	Missense_Mutation	SNP	G	G	A			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	17	37899685	37899685	G	A	SNP	GRB7	ENST00000445327	human	ensembl	70_37	+1	known	missense	c.694	p.D232N	0.960	NULL	pfam_BPS-dom,pfam_SH2,pfam_Ras-assoc,pfam_Pleckstrin_homology,smart_Ras-assoc,smart_Pleckstrin_homology,smart_SH2,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SH2,prints_SH2	-	no_errors	GRB7	HGNC
GRB7	2886	genome.wustl.edu	37	17	37901738	37901738	+	Missense_Mutation	SNP	G	G	A			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	17	37901738	37901738	G	A	SNP	GRB7	ENST00000445327	human	ensembl	70_37	+1	known	missense	c.1225	p.E409K	0.996	pfam_BPS-dom	pfam_BPS-dom,pfam_SH2,pfam_Ras-assoc,pfam_Pleckstrin_homology,smart_Ras-assoc,smart_Pleckstrin_homology,smart_SH2,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SH2,prints_SH2	-	no_errors	GRB7	HGNC
IL13RA1	3597	genome.wustl.edu	37	X	117900860	117900860	+	Silent	SNP	C	C	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	X	117900860	117900860	C	T	SNP	IL13RA1	ENST00000371666	human	ensembl	70_37	+1	known	silent	c.930	p.V310	0.997	superfamily_Fibronectin_type3	pfam_IL6_recept-bd,superfamily_Fibronectin_type3	-	no_errors	IL13RA1	HGNC
KCNH3	23416	genome.wustl.edu	37	12	49934758	49934758	+	Silent	SNP	C	C	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	12	49934758	49934758	C	T	SNP	KCNH3	ENST00000257981	human	ensembl	70_37	+1	known	silent	c.153	p.D51	1.000	pfam_PAS_4,pfam_PAS_fold,pfam_PAS_fold_3,pfscan_PAS,tigrfam_PAS	pfam_Ion_trans_dom,pfam_Ion_trans_2,pfam_cNMP-bd_dom,pfam_PAS_4,pfam_PAS_fold,pfam_PAS_fold_3,superfamily_cNMP-bd-like,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ELK,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH3	HGNC
KDM8	79831	genome.wustl.edu	37	16	27221434	27221434	+	Missense_Mutation	SNP	G	G	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	16	27221434	27221434	G	T	SNP	KDM8	ENST00000441782	human	ensembl	70_37	+1	known	missense	c.104	p.G35V	0.001	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	KDM8	HGNC
KIF13A	63971	genome.wustl.edu	37	6	17826021	17826021	+	Silent	SNP	G	G	A			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	6	17826021	17826021	G	A	SNP	KIF13A	ENST00000259711	human	ensembl	70_37	-1	known	silent	c.1764	p.I588	1.000	NULL	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_KIF1B,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF13A	HGNC
MAP1LC3B	81631	genome.wustl.edu	37	16	87436639	87436640	+	Frame_Shift_Ins	INS	-	-	AG			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	16	87436639	87436640	-	AG	INS	MAP1LC3B	ENST00000268607	human	ensembl	70_37	+1	known	frame_shift_ins	c.314_315	p.D106fs	0.996:0.674	pfam_Atg8_ubiquitin-like,pfam_Autophagy-rel_prot_12	pfam_Atg8_ubiquitin-like,pfam_Autophagy-rel_prot_12	-	no_errors	MAP1LC3B	HGNC
MARCH4	57574	genome.wustl.edu	37	2	217142480	217142480	+	Silent	SNP	G	G	A			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	2	217142480	217142480	G	A	SNP	MARCH4	ENST00000273067	human	ensembl	70_37	-1	known	silent	c.780	p.F260	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH	-	no_errors	MARCH4	HGNC
MASTL	84930	genome.wustl.edu	37	10	27459855	27459855	+	Missense_Mutation	SNP	G	G	A			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	10	27459855	27459855	G	A	SNP	MASTL	ENST00000375940	human	ensembl	70_37	+1	known	missense	c.1967	p.R656Q	1.000	superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	MASTL	HGNC
MIER1	57708	genome.wustl.edu	37	1	67425494	67425495	+	RNA	INS	-	-	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	1	67425494	67425495	-	T	INS	MIER1	ENST00000493357	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	MIER1	HGNC
NOXA1	10811	genome.wustl.edu	37	9	140320724	140320724	+	Missense_Mutation	SNP	G	G	A			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	9	140320724	140320724	G	A	SNP	NOXA1	ENST00000341349	human	ensembl	70_37	+1	known	missense	c.202	p.D68N	0.997	smart_TPR_repeat,pfscan_TPR-contain_dom	pfam_OPR_PB1,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_TPR_repeat,smart_OPR_PB1,smart_SH3_domain,pfscan_SH3_domain,pfscan_TPR-contain_dom	-	no_errors	NOXA1	HGNC
OR6C1	390321	genome.wustl.edu	37	12	55714406	55714407	+	Frame_Shift_Ins	INS	-	-	A			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	12	55714406	55714407	-	A	INS	OR6C1	ENST00000379668	human	ensembl	70_37	+1	known	frame_shift_ins	c.23_24	p.E9fs	0.038:0.306	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6C1	HGNC
PABPC3	5042	genome.wustl.edu	37	13	25670978	25670978	+	Silent	SNP	C	C	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	13	25670978	25670978	C	T	SNP	PABPC3	ENST00000281589	human	ensembl	70_37	+1	known	silent	c.642	p.F214	0.992	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom,tigrfam_PABP_1234	pfam_RRM_dom,pfam_PABP_HYD,superfamily_PABP_HYD,smart_RRM_dom,smart_RRM_dom_euk,smart_PABP_HYD,pfscan_RRM_dom,tigrfam_PABP_1234	-	no_errors	PABPC3	HGNC
PAK6	56924	genome.wustl.edu	37	15	40558568	40558568	+	Missense_Mutation	SNP	G	G	A			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	15	40558568	40558568	G	A	SNP	PAK6	ENST00000260404	human	ensembl	70_37	+1	known	missense	c.730	p.E244K	0.999	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PAK_box_Rho-bd,superfamily_Kinase-like_dom,smart_PAK_box_Rho-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_PAK_box_Rho-bd,pfscan_Prot_kinase_cat_dom	-	no_errors	PAK6	HGNC
PLEC	5339	genome.wustl.edu	37	8	145004627	145004627	+	Silent	SNP	C	C	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	8	145004627	145004627	C	T	SNP	PLEC	ENST00000322810	human	ensembl	70_37	-1	known	silent	c.2793	p.L931	1.000	smart_Spectrin/alpha-actinin	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC
POLE	5426	genome.wustl.edu	37	12	133253176	133253176	+	Missense_Mutation	SNP	C	C	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	12	133253176	133253176	C	T	SNP	POLE	ENST00000455752	human	ensembl	70_37	-1	known	missense	c.898	p.E300K	1.000	pfam_DNA-dir_DNA_pol_B_exonuc,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B	pfam_DNA_pol_e_suA_C,pfam_DNA-dir_DNA_pol_B_exonuc,pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_3'-5'_exonuclease_PolB-like,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B	-	no_errors	POLE	HGNC
PTPRF	5792	genome.wustl.edu	37	1	44088789	44088789	+	RNA	SNP	G	G	A			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	1	44088789	44088789	G	A	SNP	PTPRF	ENST00000496447	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PTPRF	HGNC
RGR	5995	genome.wustl.edu	37	10	86010161	86010161	+	Missense_Mutation	SNP	C	C	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	10	86010161	86010161	C	T	SNP	RGR	ENST00000372092	human	ensembl	70_37	+1	known	missense	c.341	p.S114F	0.002	NULL	NULL	-	no_errors	RGR	HGNC
RNF26	79102	genome.wustl.edu	37	11	119206814	119206814	+	Missense_Mutation	SNP	C	C	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	11	119206814	119206814	C	T	SNP	RNF26	ENST00000311413	human	ensembl	70_37	+1	known	missense	c.982	p.L328F	0.000	NULL	pfscan_Znf_RING	-	no_errors	RNF26	HGNC
RPS28	6234	genome.wustl.edu	37	19	8386420	8386420	+	Silent	SNP	C	C	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	19	8386420	8386420	C	T	SNP	RPS28	ENST00000600659	human	ensembl	70_37	+1	known	silent	c.6	p.D2	0.941	pfam_Ribosomal_S28e	pfam_Ribosomal_S28e,superfamily_NA-bd_OB-fold-like	-	no_errors	RPS28	HGNC
SAT1	6303	genome.wustl.edu	37	X	23803877	23803878	+	Frame_Shift_Ins	INS	-	-	A			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	X	23803877	23803878	-	A	INS	SAT1	ENST00000379270	human	ensembl	70_37	+1	known	frame_shift_ins	c.420_421	p.R141fs	1.000:1.000	pfam_GNAT_dom,superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	pfam_GNAT_dom,superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	-	no_errors	SAT1	HGNC
SERPINA6	866	genome.wustl.edu	37	14	94780691	94780691	+	Missense_Mutation	SNP	C	C	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	14	94780691	94780691	C	T	SNP	SERPINA6	ENST00000341584	human	ensembl	70_37	-1	known	missense	c.295	p.E99K	0.001	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom,prints_Prot_inh_Lserp2	-	no_errors	SERPINA6	HGNC
SIX6	4990	genome.wustl.edu	37	14	60976683	60976683	+	Silent	SNP	G	G	A			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	14	60976683	60976683	G	A	SNP	SIX6	ENST00000327720	human	ensembl	70_37	+1	known	silent	c.567	p.K189	1.000	superfamily_Homeodomain-like,smart_Homeodomain	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain	-	no_errors	SIX6	HGNC
SLC35G6	643664	genome.wustl.edu	37	17	7386113	7386113	+	Silent	SNP	G	G	A			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	17	7386113	7386113	G	A	SNP	SLC35G6	ENST00000412468	human	ensembl	70_37	+1	known	silent	c.810	p.V270	0.996	pfam_DMT	pfam_DMT	-	no_errors	SLC35G6	HGNC
SMARCA4	6597	genome.wustl.edu	37	19	11123682	11123682	+	Missense_Mutation	SNP	G	G	C			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	19	11123682	11123682	G	C	SNP	SMARCA4	ENST00000358026	human	ensembl	70_37	+1	known	missense	c.2332	p.A778P	1.000	pfam_SNF2_N,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_HSA,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_Bromodomain,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	SMARCA4	HGNC
SORBS1	10580	genome.wustl.edu	37	10	97192313	97192314	+	Frame_Shift_Ins	INS	-	-	GATTTTT			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	10	97192313	97192314	-	GATTTTT	INS	SORBS1	ENST00000361941	human	ensembl	70_37	-1	known	frame_shift_ins	c.193_192	p.C64fs	1.000:1.000	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Sorb,superfamily_SH3_domain,smart_Sorb,smart_SH3_domain,pfscan_Sorb,pfscan_SH3_domain	-	no_errors	SORBS1	HGNC
STON2	85439	genome.wustl.edu	37	14	81743548	81743548	+	Missense_Mutation	SNP	C	C	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	14	81743548	81743548	C	T	SNP	STON2	ENST00000267540	human	ensembl	70_37	-1	known	missense	c.2107	p.V703M	1.000	pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C,pirsf_Stonin,pfscan_Clathrin_mu_C	pfam_Stonin2_N,pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C,pirsf_Stonin,pfscan_Clathrin_mu_C,pfscan_SHD	-	no_errors	STON2	HGNC
STXBP4	252983	genome.wustl.edu	37	17	53111588	53111588	+	Missense_Mutation	SNP	G	G	A			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	17	53111588	53111588	G	A	SNP	STXBP4	ENST00000376352	human	ensembl	70_37	+1	known	missense	c.823	p.A275T	0.228	NULL	pfam_WW_Rsp5_WWP,pfam_PDZ,superfamily_PDZ,superfamily_WW_Rsp5_WWP,smart_PDZ,smart_WW_Rsp5_WWP,pfscan_PDZ,pfscan_WW_Rsp5_WWP	-	no_errors	STXBP4	HGNC
TCAM1P	146771	genome.wustl.edu	37	17	61937642	61937642	+	RNA	SNP	C	C	G			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	17	61937642	61937642	C	G	SNP	TCAM1P	ENST00000478379	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	TCAM1P	HGNC
TMEM70	54968	genome.wustl.edu	37	8	74893836	74893836	+	Missense_Mutation	SNP	C	C	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	8	74893836	74893836	C	T	SNP	TMEM70	ENST00000312184	human	ensembl	70_37	+1	known	missense	c.763	p.R255W	0.764	NULL	pfam_DUF1301_TMEM70	-	no_errors	TMEM70	HGNC
TTN	7273	genome.wustl.edu	37	2	179472653	179472653	+	Missense_Mutation	SNP	C	C	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	2	179472653	179472653	C	T	SNP	TTN	ENST00000342992	human	ensembl	70_37	-1	known	missense	c.45157	p.E15053K	1.000	pfam_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC
USH2A	7399	genome.wustl.edu	37	1	216390881	216390881	+	Missense_Mutation	SNP	C	C	A			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	1	216390881	216390881	C	A	SNP	USH2A	ENST00000366943	human	ensembl	70_37	-1	known	missense	c.3005	p.C1002F	1.000	pfam_EGF_laminin,smart_EGF_laminin,pfscan_EGF_laminin	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC
USP31	57478	genome.wustl.edu	37	16	23079813	23079813	+	Missense_Mutation	SNP	G	G	A			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	16	23079813	23079813	G	A	SNP	USP31	ENST00000219689	human	ensembl	70_37	-1	known	missense	c.3613	p.R1205C	1.000	NULL	pfam_Peptidase_C19,pfscan_Peptidase_C19	-	no_errors	USP31	HGNC
USP48	84196	genome.wustl.edu	37	1	22033386	22033386	+	Frame_Shift_Del	DEL	A	A	-			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	1	22033386	22033386	A	-	DEL	USP48	ENST00000529637	human	ensembl	70_37	-1	novel	frame_shift_del	c.1975	p.S659fs	0.000	NULL	pfam_Peptidase_C19,pfscan_Peptidase_C19,pfscan_Ubiquitin_supergroup	-	no_errors	USP48	HGNC
VSIG4	11326	genome.wustl.edu	37	X	65253527	65253527	+	Silent	SNP	G	G	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	X	65253527	65253527	G	T	SNP	VSIG4	ENST00000374737	human	ensembl	70_37	-1	known	silent	c.201	p.I67	0.988	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	VSIG4	HGNC
WASH6P	653440	genome.wustl.edu	37	X	155254902	155254902	+	RNA	SNP	C	C	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	X	155254902	155254902	C	T	SNP	WASH6P	ENST00000461007	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.602	-	-	-	no_errors	WASH6P	HGNC
WDR87	83889	genome.wustl.edu	37	19	38385384	38385384	+	Missense_Mutation	SNP	C	C	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	19	38385384	38385384	C	T	SNP	WDR87	ENST00000447313	human	ensembl	70_37	-1	known	missense	c.959	p.R320Q	0.004	superfamily_WD40_repeat_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,superfamily_Quinolinate_PRibosylTrfase_C,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR87	HGNC
ZSCAN9	7746	genome.wustl.edu	37	6	28195572	28195572	+	Silent	SNP	C	C	T			TCGA-EA-A44S-01A-12D-A26G-09	TCGA-EA-A44S-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c6a1b4c-b430-4670-aa45-87deef906452	f918a9be-5c0e-413b-8a6e-c307e8b2ca48	6	28195572	28195572	C	T	SNP	ZNF193	ENST00000252207	human	ensembl	70_37	+1	known	silent	c.525	p.L175	0.029	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF193	HGNC
