Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source
ABCC4	10257	genome.wustl.edu	37	13	95815421	95815421	+	Missense_Mutation	SNP	C	C	T			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	13	95815421	95815421	C	T	SNP	ABCC4	ENST00000376887	human	ensembl	70_37	-1	known	missense	c.2263	p.V755I	0.950	pfam_ABC_transptr_TM_dom,superfamily_ABC_transptrTM_dom_typ1,pfscan_ABC_transporter_type1	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1,prints_CysFib_conduc_TM	-	no_errors	ABCC4	HGNC
ACTB	60	genome.wustl.edu	37	7	5567197	5567197	+	RNA	SNP	C	C	G			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	7	5567197	5567197	C	G	SNP	ACTB	ENST00000464611	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.162	-	-	-	no_errors	ACTB	HGNC
ADC	0	genome.wustl.edu	37	1	33567487	33567487	+	Silent	SNP	C	C	T			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	1	33567487	33567487	C	T	SNP	ADC	ENST00000358680	human	ensembl	70_37	+1	known	silent	c.609	p.A203	0.002	NULL	pfam_De-COase2_N,superfamily_Ala_racemase/Decarboxylase_C,prints_Orn_de-COase	-	no_errors	ADC	HGNC
AKNA	80709	genome.wustl.edu	37	9	117099458	117099458	+	Missense_Mutation	SNP	T	T	C			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	9	117099458	117099458	T	C	SNP	AKNA	ENST00000307564	human	ensembl	70_37	-1	known	missense	c.4196	p.N1399S	0.002	NULL	pfam_TF_AT-hook	-	no_errors	AKNA	HGNC
ANK2	287	genome.wustl.edu	37	4	114290917	114290917	+	Missense_Mutation	SNP	C	C	A			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	4	114290917	114290917	C	A	SNP	ANK2	ENST00000357077	human	ensembl	70_37	+1	known	missense	c.11566	p.P3856T	0.780	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like,smart_Ankyrin_rpt,smart_ZU5,smart_Death,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK2	HGNC
ARID1A	8289	genome.wustl.edu	37	1	27057742	27057742	+	Frame_Shift_Del	DEL	C	C	-			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	1	27057742	27057742	C	-	DEL	ARID1A	ENST00000324856	human	ensembl	70_37	+1	known	frame_shift_del	c.1450	p.Y485fs	0.694	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC
ARID1A	8289	genome.wustl.edu	37	1	27057820	27057820	+	Nonsense_Mutation	SNP	C	C	T			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	1	27057820	27057820	C	T	SNP	ARID1A	ENST00000324856	human	ensembl	70_37	+1	known	nonsense	c.1528	p.Q510*	1.000	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC
C10orf90	118611	genome.wustl.edu	37	10	128335207	128335207	+	Splice_Site	SNP	C	C	G			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	10	128335207	128335207	C	G	SNP	C10orf90	ENST00000544758	human	ensembl	70_37	-1	known	splice_site	c.241-1	e2-1	0.998	-	-	-	no_errors	C10orf90	HGNC
CD1E	913	genome.wustl.edu	37	1	158325832	158325832	+	Missense_Mutation	SNP	G	G	T			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	1	158325832	158325832	G	T	SNP	CD1E	ENST00000368167	human	ensembl	70_37	+1	known	missense	c.841	p.A281S	0.043	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like	pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like	-	no_errors	CD1E	HGNC
CENPF	1063	genome.wustl.edu	37	1	214794046	214794046	+	Missense_Mutation	SNP	G	G	T			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	1	214794046	214794046	G	T	SNP	CENPF	ENST00000366955	human	ensembl	70_37	+1	known	missense	c.622	p.A208S	1.000	pfam_Centromere_CenpF_N	pfam_Centromere_CenpF_N,pfam_Centromere_CenpF_leu-rich_rpt,pfam_Centromere_CenpF_Rb-prot-bd	-	no_errors	CENPF	HGNC
CHD4	1108	genome.wustl.edu	37	12	6709699	6709699	+	Splice_Site	SNP	C	C	T			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	12	6709699	6709699	C	T	SNP	CHD4	ENST00000309577	human	ensembl	70_37	-1	known	splice_site	c.1063+1	e7+1	1.000	-	-	-	no_errors	CHD4	HGNC
CHEK2	11200	genome.wustl.edu	37	22	29095918	29095918	+	Missense_Mutation	SNP	C	C	A			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	22	29095918	29095918	C	A	SNP	CHEK2	ENST00000382580	human	ensembl	70_37	-1	known	missense	c.1045	p.G349W	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_FHA_dom,superfamily_Kinase-like_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_FHA_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	CHEK2	HGNC
COX7A2L	9167	genome.wustl.edu	37	2	42578285	42578285	+	RNA	SNP	A	A	T			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	2	42578285	42578285	A	T	SNP	COX7A2L	ENST00000482463	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	COX7A2L	HGNC
CPT1C	126129	genome.wustl.edu	37	19	50203982	50203982	+	Missense_Mutation	SNP	C	C	T			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	19	50203982	50203982	C	T	SNP	CPT1C	ENST00000323446	human	ensembl	70_37	+1	known	missense	c.323	p.A108V	0.026	NULL	pfam_Carn_acyl_trans	-	no_errors	CPT1C	HGNC
DNAH8	1769	genome.wustl.edu	37	6	38840874	38840874	+	Missense_Mutation	SNP	G	G	A			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	6	38840874	38840874	G	A	SNP	DNAH8	ENST00000359357	human	ensembl	70_37	+1	known	missense	c.6779	p.G2260D	1.000	smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,smart_AAA+_ATPase	-	no_errors	DNAH8	HGNC
DRP2	1821	genome.wustl.edu	37	X	100492679	100492679	+	Missense_Mutation	SNP	T	T	A			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	X	100492679	100492679	T	A	SNP	DRP2	ENST00000395209	human	ensembl	70_37	+1	known	missense	c.353	p.L118H	1.000	smart_Spectrin/alpha-actinin,pirsf_Dystrophin-related_2	pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_Znf_ZZ,pfam_Spectrin_repeat,pfam_WW_Rsp5_WWP,superfamily_WW_Rsp5_WWP,smart_Spectrin/alpha-actinin,smart_WW_Rsp5_WWP,smart_Znf_ZZ,pirsf_Dystrophin-related_2,pfscan_WW_Rsp5_WWP,pfscan_Znf_ZZ	-	no_errors	DRP2	HGNC
EFCAB4A	283229	genome.wustl.edu	37	11	831574	831574	+	Silent	SNP	C	C	T			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	11	831574	831574	C	T	SNP	EFCAB4A	ENST00000525077	human	ensembl	70_37	+1	novel	silent	c.1065	p.C355	0.973	NULL	pfscan_EF_HAND_2	-	no_errors	EFCAB4A	HGNC
ENSG00000232765	0	genome.wustl.edu	37	X	55307825	55307825	+	RNA	SNP	A	A	G			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	X	55307825	55307825	A	G	SNP	ENSG00000232765	ENST00000440645	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-382F24.2	Clone_based_vega_gene
EXOC3L4	91828	genome.wustl.edu	37	14	103568544	103568544	+	Missense_Mutation	SNP	G	G	A			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	14	103568544	103568544	G	A	SNP	EXOC3L4	ENST00000380069	human	ensembl	70_37	+1	known	missense	c.484	p.E162K	0.001	NULL	pfam_Sec6	-	no_errors	EXOC3L4	HGNC
GCK	2645	genome.wustl.edu	37	7	44189446	44189446	+	Missense_Mutation	SNP	C	C	T			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	7	44189446	44189446	C	T	SNP	GCK	ENST00000345378	human	ensembl	70_37	-1	known	missense	c.595	p.D199N	1.000	pfam_Hexokinase_N	pfam_Hexokinase_C,pfam_Hexokinase_N,prints_Hexokinase	-	no_errors	GCK	HGNC
GIPC2	54810	genome.wustl.edu	37	1	78601340	78601340	+	Silent	SNP	C	C	T			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	1	78601340	78601340	C	T	SNP	GIPC2	ENST00000370759	human	ensembl	70_37	+1	known	silent	c.861	p.D287	0.139	pirsf_UCP038083_PDZ	pfam_PDZ,superfamily_PDZ,superfamily_Ig_E-set,smart_PDZ,pirsf_UCP038083_PDZ,pfscan_PDZ	-	no_errors	GIPC2	HGNC
HERC1	8925	genome.wustl.edu	37	15	63921011	63921011	+	Missense_Mutation	SNP	C	C	T			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	15	63921011	63921011	C	T	SNP	HERC1	ENST00000443617	human	ensembl	70_37	-1	known	missense	c.12970	p.G4324S	1.000	pfam_Reg_chr_condens,superfamily_Reg_csome_cond/b-lactamase_inh,pfscan_Reg_chr_condens,prints_Reg_chr_condens	pfam_Reg_chr_condens,pfam_HECT,pfam_WD40_repeat,pfam_SPRY_rcpt,superfamily_Reg_csome_cond/b-lactamase_inh,superfamily_HECT,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_UBA-like,superfamily_ARM-type_fold,smart_SPla/RYanodine_receptor_subgr,smart_WD40_repeat,smart_HECT,pfscan_B30.2/SPRY,pfscan_HECT,pfscan_Reg_chr_condens,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Reg_chr_condens	-	no_errors	HERC1	HGNC
HLA-J	3137	genome.wustl.edu	37	6	29974575	29974575	+	Splice_Site	SNP	A	A	G			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	6	29974575	29974575	A	G	SNP	HLA-J	ENST00000462773	human	ensembl	70_37	+1	known	splice_site	c.NULL	NULL	0.061	-	-	-	no_errors	HLA-J	HGNC
HYDIN	54768	genome.wustl.edu	37	16	70894771	70894771	+	Silent	SNP	C	C	T			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	16	70894771	70894771	C	T	SNP	HYDIN	ENST00000316490	human	ensembl	70_37	-1	known	silent	c.11808	p.P3936	0.002	NULL	superfamily_PapD-like	-	no_errors	HYDIN	HGNC
KBTBD8	84541	genome.wustl.edu	37	3	67058535	67058535	+	Missense_Mutation	SNP	G	G	T			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	3	67058535	67058535	G	T	SNP	KBTBD8	ENST00000417314	human	ensembl	70_37	+1	known	missense	c.1532	p.R511L	0.998	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_BACK,pfam_BTB_POZ,pfam_Kelch_1,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KBTBD8	HGNC
KCNJ12	3768	genome.wustl.edu	37	17	21319343	21319343	+	Missense_Mutation	SNP	C	C	T			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	17	21319343	21319343	C	T	SNP	KCNJ12	ENST00000331718	human	ensembl	70_37	+1	known	missense	c.689	p.A230V	1.000	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,pfam_K_chnl_inward-rec_Kir_N,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir2.2	-	no_errors	KCNJ12	HGNC
KIDINS220	57498	genome.wustl.edu	37	2	8918771	8918771	+	Missense_Mutation	SNP	G	G	A			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	2	8918771	8918771	G	A	SNP	KIDINS220	ENST00000256707	human	ensembl	70_37	-1	known	missense	c.2701	p.R901W	1.000	pfam_KAP_NTPase	pfam_KAP_NTPase,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KIDINS220	HGNC
KIF5C	3800	genome.wustl.edu	37	2	149866723	149866723	+	Silent	SNP	C	C	T			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	2	149866723	149866723	C	T	SNP	KIF5C	ENST00000435030	human	ensembl	70_37	+1	known	silent	c.2625	p.R875	0.117	NULL	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF5C	HGNC
KRAS	3845	genome.wustl.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	C	A			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	12	25398284	25398284	C	A	SNP	KRAS	ENST00000256078	human	ensembl	70_37	-1	known	missense	c.35	p.G12V	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	KRAS	HGNC
LOC100996870	100996870	genome.wustl.edu	37	9	66466242	66466242	+	RNA	SNP	T	T	C			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	9	66466242	66466242	T	C	SNP	LOC100996870	ENST00000424345	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.009	-	-	-	no_errors	RP11-262H14.1	Clone_based_vega_gene
LOC101060787	101060787	genome.wustl.edu	37	22	20708820	20708820	+	Silent	SNP	C	C	T			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	22	20708820	20708820	C	T	SNP	LOC101060787	ENST00000434783	human	ensembl	70_37	+1	putative	silent	c.552	p.I184	0.023	superfamily_Kinase-like_dom	pfam_Ret-finger_pr-like_3_antisense,superfamily_Kinase-like_dom	-	no_errors	AC007731.1	Clone_based_vega_gene
LRRD1	401387	genome.wustl.edu	37	7	91794221	91794221	+	Missense_Mutation	SNP	C	C	A			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	7	91794221	91794221	C	A	SNP	LRRD1	ENST00000430130	human	ensembl	70_37	-1	known	missense	c.296	p.S99I	0.000	NULL	pfam_Leu-rich_rpt,superfamily_DEATH-like,smart_Leu-rich_rpt_typical-subtyp,pfscan_Death	-	no_errors	LRRD1	HGNC
MAP7	9053	genome.wustl.edu	37	6	136698939	136698939	+	Silent	SNP	C	C	T			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	6	136698939	136698939	C	T	SNP	MAP7	ENST00000454590	human	ensembl	70_37	-1	known	silent	c.771	p.S257	1.000	NULL	pfam_E-MAP-115	-	no_errors	MAP7	HGNC
MIR3648	100500862	genome.wustl.edu	37	21	9825991	9825991	+	RNA	SNP	C	C	G			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	21	9825991	9825991	C	G	SNP	MIR3648	ENST00000581792	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.121	-	-	-	no_errors	MIR3648	HGNC
MKL2	57496	genome.wustl.edu	37	16	14339465	14339465	+	Missense_Mutation	SNP	C	C	G			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	16	14339465	14339465	C	G	SNP	MKL2	ENST00000341243	human	ensembl	70_37	+1	known	missense	c.1127	p.S376C	0.002	NULL	pfam_RPEL_repeat,pfam_SAP_DNA-bd,smart_RPEL_repeat,smart_SAP_DNA-bd,pfscan_RPEL_repeat,pfscan_SAP_DNA-bd	-	no_errors	MKL2	HGNC
MUC2	4583	genome.wustl.edu	37	11	1099467	1099467	+	Silent	SNP	T	T	C			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	11	1099467	1099467	T	C	SNP	MUC2	ENST00000441003	human	ensembl	70_37	+1	known	silent	c.7308	p.P2436	0.001	superfamily_TIL_dom	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,superfamily_Prot_inh_PMP,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC2	HGNC
MYH7B	57644	genome.wustl.edu	37	20	33567553	33567553	+	Silent	SNP	C	C	T			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	20	33567553	33567553	C	T	SNP	MYH7B	ENST00000262873	human	ensembl	70_37	+1	novel	silent	c.414	p.N138	0.996	pfam_Myosin_head_motor_dom,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_Myosin_S1_N,superfamily_Prefoldin,superfamily_tRNA-bd_arm,superfamily_t-SNARE,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7B	HGNC
NACA	4666	genome.wustl.edu	37	12	57110236	57110236	+	Missense_Mutation	SNP	G	G	C			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	12	57110236	57110236	G	C	SNP	NACA	ENST00000454682	human	ensembl	70_37	-1	known	missense	c.5078	p.T1693R	0.000	NULL	pfam_Nas_poly-pep-assoc_cplx,superfamily_UBA-like,pfscan_Nas_poly-pep-assoc_cplx	-	no_errors	NACA	HGNC
NARS2	79731	genome.wustl.edu	37	11	78270635	78270635	+	Missense_Mutation	SNP	T	T	C			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	11	78270635	78270635	T	C	SNP	NARS2	ENST00000281038	human	ensembl	70_37	-1	known	missense	c.544	p.I182V	0.794	pfam_aa-tRNA-synt_II,pfscan_aa-tRNA-synth_II,tigrfam_Asn-tRNA-ligase_IIb	pfam_aa-tRNA-synt_II,pfam_NA-bd_OB_tRNA-helicase,superfamily_NA-bd_OB-fold-like,pfscan_aa-tRNA-synth_II,prints_Asp/Asn-tRNA-synth_IIb,tigrfam_Asn-tRNA-ligase_IIb	-	no_errors	NARS2	HGNC
NCKAP5	344148	genome.wustl.edu	37	2	133887640	133887640	+	Missense_Mutation	SNP	C	C	T			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	2	133887640	133887640	C	T	SNP	NCKAP5	ENST00000317721	human	ensembl	70_37	-1	known	missense	c.251	p.R84H	1.000	NULL	NULL	-	no_errors	NCKAP5	HGNC
OBSCN	84033	genome.wustl.edu	37	1	228520902	228520902	+	Missense_Mutation	SNP	G	G	A			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	1	228520902	228520902	G	A	SNP	OBSCN	ENST00000422127	human	ensembl	70_37	+1	known	missense	c.15734	p.R5245Q	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,pfscan_DH-domain	-	no_errors	OBSCN	HGNC
OR8D2	283160	genome.wustl.edu	37	11	124189609	124189609	+	Missense_Mutation	SNP	C	C	T			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	11	124189609	124189609	C	T	SNP	OR8D2	ENST00000357438	human	ensembl	70_37	-1	known	missense	c.485	p.R162H	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8D2	HGNC
PCDHB10	56126	genome.wustl.edu	37	5	140573806	140573806	+	Missense_Mutation	SNP	G	G	A			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	5	140573806	140573806	G	A	SNP	PCDHB10	ENST00000239446	human	ensembl	70_37	+1	known	missense	c.1681	p.V561M	0.894	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB10	HGNC
PCDHB16	57717	genome.wustl.edu	37	5	140563815	140563815	+	Missense_Mutation	SNP	G	G	A			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	5	140563815	140563815	G	A	SNP	PCDHB16	ENST00000361016	human	ensembl	70_37	+1	known	missense	c.1681	p.V561M	0.848	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB16	HGNC
PCSK7	9159	genome.wustl.edu	37	11	117076957	117076957	+	Missense_Mutation	SNP	T	T	C			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	11	117076957	117076957	T	C	SNP	PCSK7	ENST00000320934	human	ensembl	70_37	-1	known	missense	c.2114	p.H705R	0.674	NULL	pfam_Peptidase_S8/S53,pfam_PrprotnconvertsP,superfamily_Peptidase_S8/S53,superfamily_Galactose-bd-like,superfamily_Prot_inh_propept,prints_Peptidase_S8_subtilisin-rel	-	no_errors	PCSK7	HGNC
PDE6D	5147	genome.wustl.edu	37	2	232597737	232597737	+	Missense_Mutation	SNP	G	G	A			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	2	232597737	232597737	G	A	SNP	PDE6D	ENST00000409772	human	ensembl	70_37	-1	putative	missense	c.272	p.T91M	0.909	NULL	pfam_GMP_PDE_delta,superfamily_Ig_E-set	-	no_errors	PDE6D	HGNC
PEBP4	157310	genome.wustl.edu	37	8	22582443	22582443	+	Missense_Mutation	SNP	G	G	A			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	8	22582443	22582443	G	A	SNP	PEBP4	ENST00000256404	human	ensembl	70_37	-1	known	missense	c.430	p.H144Y	0.000	pfam_PtdEtn-bd_prot_PEBP,superfamily_PtdEtn-bd_prot_PEBP	pfam_PtdEtn-bd_prot_PEBP,superfamily_PtdEtn-bd_prot_PEBP	-	no_errors	PEBP4	HGNC
PHC2	1912	genome.wustl.edu	37	1	33841026	33841026	+	Missense_Mutation	SNP	G	G	A			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	1	33841026	33841026	G	A	SNP	PHC2	ENST00000419414	human	ensembl	70_37	-1	known	missense	c.115	p.R39C	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM,pfscan_Znf_FCS	-	no_errors	PHC2	HGNC
PIK3CA	5290	genome.wustl.edu	37	3	178916944	178916944	+	Missense_Mutation	SNP	A	A	G			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	3	178916944	178916944	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	70_37	+1	known	missense	c.331	p.K111E	1.000	NULL	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC
PJA1	64219	genome.wustl.edu	37	X	68382228	68382228	+	Missense_Mutation	SNP	T	T	C			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	X	68382228	68382228	T	C	SNP	PJA1	ENST00000361478	human	ensembl	70_37	-1	known	missense	c.854	p.H285R	0.152	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	PJA1	HGNC
PNLIP	5406	genome.wustl.edu	37	10	118319999	118319999	+	Missense_Mutation	SNP	G	G	A			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	10	118319999	118319999	G	A	SNP	PNLIP	ENST00000369221	human	ensembl	70_37	+1	known	missense	c.1132	p.G378R	1.000	pfam_LipOase_LH2,superfamily_Lipase_LipOase,smart_LipOase_LH2,pirsf_Lipoprotein_lipase_LIPH,pfscan_LipOase_LH2	pfam_Lipase_N,pfam_LipOase_LH2,superfamily_Lipase_LipOase,smart_LipOase_LH2,pirsf_Lipoprotein_lipase_LIPH,pfscan_LipOase_LH2,prints_Lipase,prints_Lipase_panc	-	no_errors	PNLIP	HGNC
PTEN	5728	genome.wustl.edu	37	10	89692905	89692905	+	Missense_Mutation	SNP	G	G	A			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	10	89692905	89692905	G	A	SNP	PTEN	ENST00000371953	human	ensembl	70_37	+1	known	missense	c.389	p.R130Q	1.000	pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tyr/Dual-specificity_Pase,pfscan_Phosphatase_tensin-typ	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Tyr_Pase_cat,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tyr/Dual-specificity_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	PTEN	HGNC
QSER1	79832	genome.wustl.edu	37	11	32995031	32995031	+	Missense_Mutation	SNP	T	T	C			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	11	32995031	32995031	T	C	SNP	QSER1	ENST00000399302	human	ensembl	70_37	+1	known	missense	c.4907	p.M1636T	1.000	NULL	NULL	-	no_errors	QSER1	HGNC
RBM23	55147	genome.wustl.edu	37	14	23371498	23371498	+	Nonsense_Mutation	SNP	G	G	A			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	14	23371498	23371498	G	A	SNP	RBM23	ENST00000359890	human	ensembl	70_37	-1	known	nonsense	c.1024	p.R342*	0.945	tigrfam_CC1_SF	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_CC1_SF	-	no_errors	RBM23	HGNC
REG1B	5968	genome.wustl.edu	37	2	79313499	79313499	+	Silent	SNP	T	T	G			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	2	79313499	79313499	T	G	SNP	REG1B	ENST00000305089	human	ensembl	70_37	-1	known	silent	c.315	p.P105	0.001	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	REG1B	HGNC
SGOL1	151648	genome.wustl.edu	37	3	20212755	20212755	+	RNA	DEL	A	A	-			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	3	20212755	20212755	A	-	DEL	SGOL1	ENST00000460637	human	ensembl	70_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	SGOL1	HGNC
SOX17	64321	genome.wustl.edu	37	8	55370985	55370985	+	Missense_Mutation	SNP	C	C	G			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	8	55370985	55370985	C	G	SNP	SOX17	ENST00000297316	human	ensembl	70_37	+1	known	missense	c.287	p.A96G	1.000	pfam_HMG_superfamily,superfamily_HMG_superfamily,smart_HMG_superfamily,pfscan_HMG_superfamily	pfam_Sox_C_TAD,pfam_HMG_superfamily,superfamily_HMG_superfamily,smart_HMG_superfamily,pfscan_HMG_superfamily	-	no_errors	SOX17	HGNC
SPRYD3	84926	genome.wustl.edu	37	12	53468542	53468542	+	Missense_Mutation	SNP	C	C	T			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	12	53468542	53468542	C	T	SNP	SPRYD3	ENST00000301463	human	ensembl	70_37	-1	known	missense	c.398	p.R133H	0.998	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	-	no_errors	SPRYD3	HGNC
STAT5A	6776	genome.wustl.edu	37	17	40452767	40452767	+	Missense_Mutation	SNP	C	C	T			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	17	40452767	40452767	C	T	SNP	STAT5A	ENST00000345506	human	ensembl	70_37	+1	known	missense	c.868	p.R290W	1.000	pfam_STAT_TF_alpha,superfamily_STAT_TF_coiled-coil	pfam_STAT_TF_DNA-bd,pfam_STAT_TF_alpha,pfam_STAT_TF_prot_interaction,pfam_SH2,superfamily_p53-like_TF_DNA-bd,superfamily_STAT_TF_coiled-coil,superfamily_STAT_TF_prot_interaction,smart_STAT_TF_prot_interaction,smart_SH2,pfscan_SH2	-	no_errors	STAT5A	HGNC
TGFB3	7043	genome.wustl.edu	37	14	76437563	76437563	+	Silent	SNP	G	G	C			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	14	76437563	76437563	G	C	SNP	TGFB3	ENST00000238682	human	ensembl	70_37	-1	known	silent	c.552	p.R184	1.000	pfam_TGF-b_N,pirsf_TGF-beta,prints_Transform_grow_fac_b3,prints_TGF-beta	pfam_TGF-b_N,pfam_TGF-b_C,smart_TGF-b_C,pirsf_TGF-beta,prints_Transform_grow_fac_b3,prints_TGF-beta	-	no_errors	TGFB3	HGNC
THAP4	51078	genome.wustl.edu	37	2	242572605	242572605	+	Missense_Mutation	SNP	C	C	T			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	2	242572605	242572605	C	T	SNP	THAP4	ENST00000407315	human	ensembl	70_37	-1	known	missense	c.967	p.A323T	0.996	NULL	pfam_DUF1794,pfam_Znf_C2CH,superfamily_Calycin-like,smart_Znf_C2CH,pfscan_Znf_C2CH	-	no_errors	THAP4	HGNC
TRIM2	23321	genome.wustl.edu	37	4	154197120	154197120	+	Silent	SNP	C	C	T			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	4	154197120	154197120	C	T	SNP	TRIM2	ENST00000338700	human	ensembl	70_37	+1	known	silent	c.291	p.P97	1.000	NULL	pfam_NHL_repeat,pfam_Filamin/ABP280_repeat-like,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_Ig_E-set,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Filamin,pfscan_Filamin/ABP280_repeat-like,pfscan_NHL_repeat_subgr,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM2	HGNC
TTC22	55001	genome.wustl.edu	37	1	55266581	55266581	+	Frame_Shift_Del	DEL	G	G	-			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	1	55266581	55266581	G	-	DEL	TTC22	ENST00000371276	human	ensembl	70_37	-1	known	frame_shift_del	c.256	p.R86fs	1.000	smart_TPR_repeat	smart_TPR_repeat	-	no_errors	TTC22	HGNC
UPK2	7379	genome.wustl.edu	37	11	118828883	118828883	+	Silent	SNP	C	C	T			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	11	118828883	118828883	C	T	SNP	UPK2	ENST00000264031	human	ensembl	70_37	+1	known	silent	c.495	p.V165	0.323	pfam_Uroplakin_II,pirsf_Uroplakin_II	pfam_Uroplakin_II,pirsf_Uroplakin_II	-	no_errors	UPK2	HGNC
ZNF331	55422	genome.wustl.edu	37	19	54080494	54080494	+	Missense_Mutation	SNP	G	G	A			TCGA-EA-A4BA-01A-21D-A26G-09	TCGA-EA-A4BA-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	2c562265-1507-4db5-a860-7f5957062943	064a0bfd-273b-4043-a48b-323703069f1e	19	54080494	54080494	G	A	SNP	ZNF331	ENST00000253144	human	ensembl	70_37	+1	known	missense	c.680	p.G227D	0.009	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF331	HGNC
