Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source
ABCA7	10347	genome.wustl.edu	37	19	1050958	1050958	+	Missense_Mutation	SNP	C	C	G			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	19	1050958	1050958	C	G	SNP	ABCA7	ENST00000263094	human	ensembl	70_37	+1	known	missense	c.2591	p.S864C	1.000	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,superfamily_GroES-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA7	HGNC
ABHD3	171586	genome.wustl.edu	37	18	19239206	19239206	+	Missense_Mutation	SNP	T	T	C			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	18	19239206	19239206	T	C	SNP	ABHD3	ENST00000289119	human	ensembl	70_37	-1	known	missense	c.767	p.E256G	1.000	pfam_AB_hydrolase_1,pirsf_AB-Hydro_YheT	pfam_AB_hydrolase_1,pirsf_AB-Hydro_YheT	-	no_errors	ABHD3	HGNC
ANKRD30BL	554226	genome.wustl.edu	37	2	132911192	132911192	+	Silent	SNP	G	G	A			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	2	132911192	132911192	G	A	SNP	ANKRD30BL	ENST00000295181	human	ensembl	70_37	-1	known	silent	c.690	p.I230	0.046	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD30BL	HGNC
AOX2P	344454	genome.wustl.edu	37	2	201619758	201619759	+	RNA	DEL	TG	TG	-			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	2	201619758	201619759	TG	-	DEL	AOX2P	ENST00000472376	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	AOX2P	HGNC
APOBEC3G	60489	genome.wustl.edu	37	22	39477172	39477172	+	Missense_Mutation	SNP	C	C	T			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	22	39477172	39477172	C	T	SNP	APOBEC3G	ENST00000407997	human	ensembl	70_37	+1	known	missense	c.406	p.R136C	0.000	pfam_APOBEC_C,superfamily_Cytidine_deaminase-like	pfam_APOBEC_N,pfam_APOBEC_C,superfamily_Cytidine_deaminase-like	-	no_errors	APOBEC3G	HGNC
AR	367	genome.wustl.edu	37	X	66937348	66937348	+	Missense_Mutation	SNP	G	G	C			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	X	66937348	66937348	G	C	SNP	AR	ENST00000374690	human	ensembl	70_37	+1	known	missense	c.2202	p.Q734H	1.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core	pfam_Andrgn_rcpt,pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Andrgn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	AR	HGNC
ATP10A	57194	genome.wustl.edu	37	15	25958932	25958932	+	Missense_Mutation	SNP	C	C	T			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	15	25958932	25958932	C	T	SNP	ATP10A	ENST00000356865	human	ensembl	70_37	-1	known	missense	c.2233	p.V745I	0.997	superfamily_HAD-like_dom,superfamily_ATPase_cation_domN,tigrfam_ATPase_P-typ_Plipid-transl	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_Dehalogen-like_hydro,superfamily_HAD-like_dom,superfamily_ATPase_cation_domN,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_Plipid-transl,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP10A	HGNC
BEND6	221336	genome.wustl.edu	37	6	56846694	56846694	+	Nonsense_Mutation	SNP	C	C	G			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	6	56846694	56846694	C	G	SNP	BEND6	ENST00000370746	human	ensembl	70_37	+1	known	nonsense	c.86	p.S29*	1.000	NULL	pfam_BEN_domain	-	no_errors	BEND6	HGNC
BVES	11149	genome.wustl.edu	37	6	105577278	105577278	+	Silent	SNP	C	C	T			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	6	105577278	105577278	C	T	SNP	BVES	ENST00000314641	human	ensembl	70_37	-1	known	silent	c.327	p.S109	0.094	NULL	pfam_Popeye_prot,superfamily_cNMP-bd-like	-	no_errors	BVES	HGNC
C16orf62	57020	genome.wustl.edu	37	16	19584549	19584549	+	Missense_Mutation	SNP	G	G	A			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	16	19584549	19584549	G	A	SNP	C16orf62	ENST00000438132	human	ensembl	70_37	+1	known	missense	c.661	p.E221K	1.000	NULL	NULL	-	no_errors	C16orf62	HGNC
C16orf82	162083	genome.wustl.edu	37	16	27079690	27079690	+	RNA	SNP	C	C	G			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	16	27079690	27079690	C	G	SNP	C16orf82	ENST00000418886	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	C16orf82	HGNC
C9orf78	51759	genome.wustl.edu	37	9	132596001	132596001	+	RNA	DEL	A	A	-			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	9	132596001	132596001	A	-	DEL	C9orf78	ENST00000461762	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.115	-	-	-	no_errors	C9orf78	HGNC
CABP1	9478	genome.wustl.edu	37	12	121094061	121094061	+	Missense_Mutation	SNP	G	G	A			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	12	121094061	121094061	G	A	SNP	CABP1	ENST00000288616	human	ensembl	70_37	+1	known	missense	c.211	p.E71K	0.999	NULL	pfam_EF-hand,smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	-	no_errors	CABP1	HGNC
CAMK1	8536	genome.wustl.edu	37	3	9802348	9802348	+	Missense_Mutation	SNP	G	G	C			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	3	9802348	9802348	G	C	SNP	CAMK1	ENST00000256460	human	ensembl	70_37	-1	known	missense	c.737	p.S246C	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	CAMK1	HGNC
CEP192	55125	genome.wustl.edu	37	18	13100368	13100368	+	Missense_Mutation	SNP	C	C	G			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	18	13100368	13100368	C	G	SNP	CEP192	ENST00000506447	human	ensembl	70_37	+1	known	missense	c.6728	p.S2243C	0.775	NULL	NULL	-	no_errors	CEP192	HGNC
CFHR5	81494	genome.wustl.edu	37	1	196977674	196977674	+	Missense_Mutation	SNP	G	G	A			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	1	196977674	196977674	G	A	SNP	CFHR5	ENST00000367414	human	ensembl	70_37	+1	known	missense	c.1643	p.R548K	0.000	superfamily_Complement_control_module,smart_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CFHR5	HGNC
CHN2	1124	genome.wustl.edu	37	7	29552182	29552182	+	Missense_Mutation	SNP	T	T	G			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	7	29552182	29552182	T	G	SNP	CHN2	ENST00000539406	human	ensembl	70_37	+1	known	missense	c.1463	p.V488G	1.000	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_SH2,superfamily_Rho_GTPase_activation_prot,smart_SH2,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_SH2,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom,prints_DAG/PE-bd	-	no_errors	CHN2	HGNC
CNBD1	168975	genome.wustl.edu	37	8	88249229	88249229	+	Silent	SNP	A	A	G			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	8	88249229	88249229	A	G	SNP	CNBD1	ENST00000518476	human	ensembl	70_37	+1	known	silent	c.660	p.G220	0.000	superfamily_cNMP-bd-like	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,pfscan_cNMP-bd_dom	-	no_errors	CNBD1	HGNC
CNTN2	6900	genome.wustl.edu	37	1	205039053	205039053	+	Silent	SNP	C	C	A			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	1	205039053	205039053	C	A	SNP	CNTN2	ENST00000331830	human	ensembl	70_37	+1	known	silent	c.2295	p.G765	0.847	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	CNTN2	HGNC
DEDD	9191	genome.wustl.edu	37	1	161091834	161091834	+	RNA	DEL	C	C	-			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	1	161091834	161091834	C	-	DEL	DEDD	ENST00000486041	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.032	-	-	-	no_errors	DEDD	HGNC
DFFA	1676	genome.wustl.edu	37	1	10532464	10532464	+	Missense_Mutation	SNP	G	G	T			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	1	10532464	10532464	G	T	SNP	DFFA	ENST00000377038	human	ensembl	70_37	-1	known	missense	c.52	p.L18I	0.339	pfam_CAD,pirsf_DNA_fragmentation_factor_asu,pfscan_CAD	pfam_DNA_fragmentation_C,pfam_CAD,smart_CAD,pirsf_DNA_fragmentation_factor_asu,pfscan_CAD	-	no_errors	DFFA	HGNC
FBN1	2200	genome.wustl.edu	37	15	48888524	48888524	+	Missense_Mutation	SNP	C	C	T			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	15	48888524	48888524	C	T	SNP	FBN1	ENST00000316623	human	ensembl	70_37	-1	known	missense	c.494	p.R165Q	1.000	smart_EG-like_dom,pirsf_FBN,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd,pfam_EG-like_dom,pfam_TB_dom,superfamily_TB_dom,superfamily_Growth_fac_rcpt,smart_EG-like_dom,smart_EGF-like_Ca-bd,pirsf_FBN,pfscan_EG-like_dom	-	no_errors	FBN1	HGNC
FOXR2	139628	genome.wustl.edu	37	X	55650327	55650327	+	Silent	SNP	G	G	A			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	X	55650327	55650327	G	A	SNP	FOXR2	ENST00000339140	human	ensembl	70_37	+1	known	silent	c.183	p.Q61	0.015	NULL	pfam_TF_fork_head,smart_TF_fork_head,prints_TF_fork_head,pfscan_TF_fork_head	-	no_errors	FOXR2	HGNC
GOLGA6C	653641	genome.wustl.edu	37	15	75557739	75557739	+	Missense_Mutation	SNP	G	G	A			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	15	75557739	75557739	G	A	SNP	GOLGA6C	ENST00000300576	human	ensembl	70_37	+1	known	missense	c.733	p.E245K	0.902	NULL	NULL	-	no_errors	GOLGA6C	HGNC
HEATR1	55127	genome.wustl.edu	37	1	236734921	236734921	+	Missense_Mutation	SNP	C	C	T			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	1	236734921	236734921	C	T	SNP	HEATR1	ENST00000366582	human	ensembl	70_37	-1	known	missense	c.3773	p.C1258Y	1.000	superfamily_ARM-type_fold	pfam_BP28_C_dom,pfam_U3snoRNP10,superfamily_ARM-type_fold	-	no_errors	HEATR1	HGNC
HELZ2	85441	genome.wustl.edu	37	20	62196447	62196447	+	Missense_Mutation	SNP	C	C	T			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	20	62196447	62196447	C	T	SNP	HELZ2	ENST00000467148	human	ensembl	70_37	-1	known	missense	c.3728	p.R1243Q	0.000	NULL	pfam_RNase_II/R,smart_RNase_II/R	-	no_errors	HELZ2	HGNC
HSPG2	3339	genome.wustl.edu	37	1	22170683	22170683	+	Silent	SNP	G	G	A			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	1	22170683	22170683	G	A	SNP	HSPG2	ENST00000374695	human	ensembl	70_37	-1	known	silent	c.8574	p.V2858	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_V-set_subgr,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Laminin_G,pfam_Laminin_B_type_IV,pfam_EGF_laminin,pfam_LDrepeatLR_classA_rpt,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_SEA,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Laminin_B_subgr,smart_EGF_laminin,smart_EGF-like_Ca-bd,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_LDrepeatLR_classA_rpt,pfscan_SEA,pfscan_Ig-like	-	no_errors	HSPG2	HGNC
ITGA11	22801	genome.wustl.edu	37	15	68624760	68624760	+	Silent	SNP	C	C	G			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	15	68624760	68624760	C	G	SNP	ITGA11	ENST00000315757	human	ensembl	70_37	-1	known	silent	c.1482	p.V494	0.030	pfam_FG-GAP,smart_Int_alpha_beta-p	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGA11	HGNC
KCNQ1	3784	genome.wustl.edu	37	11	2609969	2609969	+	Missense_Mutation	SNP	C	C	G			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	11	2609969	2609969	C	G	SNP	KCNQ1	ENST00000155840	human	ensembl	70_37	+1	known	missense	c.1278	p.D426E	0.982	prints_K_chnl_volt-dep_KCQN1	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ion_trans_dom,pfam_Ion_trans_2,prints_K_chnl_volt-dep_KCQN1,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ1	HGNC
KIAA1875	340390	genome.wustl.edu	37	8	145166328	145166328	+	Splice_Site	SNP	G	G	T			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	8	145166328	145166328	G	T	SNP	KIAA1875	ENST00000323662	human	ensembl	70_37	+1	putative	splice_site	c.2427-1	e11-1	0.980	-	-	-	no_errors	KIAA1875	HGNC
KLK14	43847	genome.wustl.edu	37	19	51584836	51584836	+	Silent	SNP	G	G	A			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	19	51584836	51584836	G	A	SNP	KLK14	ENST00000156499	human	ensembl	70_37	-1	known	silent	c.213	p.A71	0.927	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6,prints_Peptidase_S1A	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6,prints_Peptidase_S1A	-	no_errors	KLK14	HGNC
KTN1	3895	genome.wustl.edu	37	14	56103991	56103991	+	Nonsense_Mutation	SNP	C	C	G			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	14	56103991	56103991	C	G	SNP	KTN1	ENST00000395309	human	ensembl	70_37	+1	known	nonsense	c.1625	p.S542*	1.000	NULL	NULL	-	no_errors	KTN1	HGNC
LRRK2	120892	genome.wustl.edu	37	12	40645343	40645343	+	Missense_Mutation	SNP	G	G	T			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	12	40645343	40645343	G	T	SNP	LRRK2	ENST00000298910	human	ensembl	70_37	+1	known	missense	c.1178	p.G393V	0.989	superfamily_ARM-type_fold	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_MIRO-like,pfam_Small_GTPase,pfam_Leu-rich_rpt,pfam_Small_GTPase_ARF/SAR,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Small_GTPase_Rab_type,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,prints_Small_GTPase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	LRRK2	HGNC
MAP1LC3A	84557	genome.wustl.edu	37	20	33147555	33147555	+	Silent	SNP	G	G	C			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	20	33147555	33147555	G	C	SNP	MAP1LC3A	ENST00000360668	human	ensembl	70_37	+1	known	silent	c.219	p.L73	1.000	pfam_Atg8_ubiquitin-like,pfam_Autophagy-rel_prot_12	pfam_Atg8_ubiquitin-like,pfam_Autophagy-rel_prot_12	-	no_errors	MAP1LC3A	HGNC
MDC1	9656	genome.wustl.edu	37	6	30671436	30671436	+	Missense_Mutation	SNP	C	C	T			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	6	30671436	30671436	C	T	SNP	MDC1	ENST00000376406	human	ensembl	70_37	-1	known	missense	c.5524	p.E1842K	0.649	NULL	pfam_FHA_dom,superfamily_BRCT_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_BRCT_dom,pfscan_FHA_dom	-	no_errors	MDC1	HGNC
MT-ATP6	4508	genome.wustl.edu	37	MT	8701	8701	+	Missense_Mutation	SNP	A	A	G			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	MT	8701	8701	A	G	SNP	MT-ATP6	ENST00000361899	human	ensembl	70_37	+1	known	missense	c.175	p.T59A	NULL	pfam_ATPase_F0-cplx_asu,tigrfam_ATPase_F0-cplx_asu	pfam_ATPase_F0-cplx_asu,superfamily_ATPase_F0-cplx_asu,prints_ATPase_F0-cplx_asu,tigrfam_ATPase_F0-cplx_asu	-	no_errors	MT-ATP6	HGNC
MUC5B	727897	genome.wustl.edu	37	11	1265856	1265856	+	Silent	SNP	C	C	T			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	11	1265856	1265856	C	T	SNP	MUC5B	ENST00000447027	human	ensembl	70_37	+1	known	silent	c.7755	p.T2585	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC
MUC5B	727897	genome.wustl.edu	37	11	1265936	1265936	+	Missense_Mutation	SNP	T	T	C			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	11	1265936	1265936	T	C	SNP	MUC5B	ENST00000447027	human	ensembl	70_37	+1	known	missense	c.7835	p.L2612P	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC
MYL9	10398	genome.wustl.edu	37	20	35173466	35173466	+	Missense_Mutation	SNP	C	C	T			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	20	35173466	35173466	C	T	SNP	MYL9	ENST00000279022	human	ensembl	70_37	+1	known	missense	c.179	p.S60L	1.000	pfam_EF-hand,smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	pfam_EF-hand,smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	-	no_errors	MYL9	HGNC
NLRP8	126205	genome.wustl.edu	37	19	56463942	56463942	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	19	56463942	56463942	G	T	SNP	NLRP8	ENST00000291971	human	ensembl	70_37	+1	known	nonsense	c.406	p.G136*	0.000	NULL	pfam_DAPIN,superfamily_DEATH-like,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP8	HGNC
NOP56	10528	genome.wustl.edu	37	20	2635525	2635525	+	Missense_Mutation	SNP	G	G	A			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	20	2635525	2635525	G	A	SNP	NOP56	ENST00000329276	human	ensembl	70_37	+1	known	missense	c.501	p.M167I	1.000	pfam_NOSIC,smart_NOSIC	pfam_SnoRNA-bd_dom,pfam_NOSIC,pfam_NOP5_N,smart_NOSIC	-	no_errors	NOP56	HGNC
NSD1	64324	genome.wustl.edu	37	5	176562700	176562700	+	Missense_Mutation	SNP	C	C	T			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	5	176562700	176562700	C	T	SNP	NSD1	ENST00000439151	human	ensembl	70_37	+1	known	missense	c.596	p.S199L	1.000	NULL	pfam_PWWP,pfam_SET_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_PWWP,smart_Znf_PHD,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger	-	no_errors	NSD1	HGNC
OR10Z1	128368	genome.wustl.edu	37	1	158576486	158576487	+	Frame_Shift_Ins	INS	-	-	G			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	1	158576486	158576487	-	G	INS	OR10Z1	ENST00000361284	human	ensembl	70_37	+1	known	frame_shift_ins	c.258_259	p.D88fs	0.000:0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10Z1	HGNC
PAK7	57144	genome.wustl.edu	37	20	9561269	9561269	+	Silent	SNP	G	G	A			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	20	9561269	9561269	G	A	SNP	PAK7	ENST00000353224	human	ensembl	70_37	-1	known	silent	c.513	p.H171	0.021	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PAK_box_Rho-bd,superfamily_Kinase-like_dom,smart_PAK_box_Rho-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_PAK_box_Rho-bd,pfscan_Prot_kinase_cat_dom	-	no_errors	PAK7	HGNC
RAD9B	144715	genome.wustl.edu	37	12	110957694	110957694	+	Missense_Mutation	SNP	C	C	T			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	12	110957694	110957694	C	T	SNP	RAD9B	ENST00000392672	human	ensembl	70_37	+1	known	missense	c.863	p.S288L	0.101	pirsf_Rad9	pfam_Rad9/Ddc1,pirsf_Rad9	-	no_errors	RAD9B	HGNC
RASAL2	9462	genome.wustl.edu	37	1	178411962	178411962	+	Missense_Mutation	SNP	G	G	T			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	1	178411962	178411962	G	T	SNP	RASAL2	ENST00000367649	human	ensembl	70_37	+1	known	missense	c.1080	p.W360C	1.000	pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep	pfam_DUF3498,pfam_RasGAP,pfam_Pleckstrin_homology,pfam_C2_Ca-dep,superfamily_Rho_GTPase_activation_prot,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_PP1_inhibitor,smart_Pleckstrin_homology,smart_C2_Ca-dep,smart_RasGAP,pfscan_Pleckstrin_homology,pfscan_RasGAP	-	no_errors	RASAL2	HGNC
RBM12	10137	genome.wustl.edu	37	20	34242510	34242510	+	Silent	SNP	C	C	T			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	20	34242510	34242510	C	T	SNP	RBM12	ENST00000359646	human	ensembl	70_37	-1	known	silent	c.735	p.P245	0.836	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM12	HGNC
RERGL	79785	genome.wustl.edu	37	12	18238556	18238556	+	Nonsense_Mutation	SNP	G	G	A			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	12	18238556	18238556	G	A	SNP	RERGL	ENST00000229002	human	ensembl	70_37	-1	known	nonsense	c.184	p.Q62*	1.000	pfam_Small_GTPase,pfam_MIRO-like,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type	pfam_Small_GTPase,pfam_MIRO-like,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type	-	no_errors	RERGL	HGNC
RGPD3	653489	genome.wustl.edu	37	2	107049624	107049624	+	Missense_Mutation	SNP	C	C	G			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	2	107049624	107049624	C	G	SNP	RGPD3	ENST00000304514	human	ensembl	70_37	-1	known	missense	c.2323	p.E775Q	1.000	NULL	pfam_Ran_bind_dom,pfam_GRIP,pfam_TPR-1,pfam_TPR_2,smart_TPR_repeat,smart_Ran_bind_dom,smart_GRIP,pfscan_GRIP,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Ran_bind_dom	-	no_errors	RGPD3	HGNC
RGPD4	285190	genome.wustl.edu	37	2	108479255	108479255	+	Missense_Mutation	SNP	G	G	C			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	2	108479255	108479255	G	C	SNP	RGPD4	ENST00000354986	human	ensembl	70_37	+1	known	missense	c.2323	p.E775Q	0.997	NULL	pfam_Ran_bind_dom,pfam_GRIP,pfam_TPR-1,pfam_TPR_2,superfamily_GRIP,smart_TPR_repeat,smart_Ran_bind_dom,smart_GRIP,pfscan_GRIP,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Ran_bind_dom	-	no_errors	RGPD4	HGNC
SERPINB11	89778	genome.wustl.edu	37	18	61322841	61322841	+	RNA	SNP	G	G	T			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	18	61322841	61322841	G	T	SNP	SERPINB11	ENST00000489748	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SERPINB11	HGNC
SFRP2	6423	genome.wustl.edu	37	4	154709955	154709956	+	In_Frame_Ins	INS	-	-	AGC			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	4	154709955	154709956	-	AGC	INS	SFRP2	ENST00000274063	human	ensembl	70_37	-1	known	in_frame_ins	c.33_32	p.12in_frame_insL	0.009:0.677	NULL	pfam_Frizzled_dom,pfam_Netrin_module_non-TIMP,superfamily_Frizzled_dom,superfamily_TIMP-like_OB-fold,smart_Frizzled_dom,smart_Netrin_module_non-TIMP,pfscan_Frizzled_dom,pfscan_Netrin_domain	-	no_errors	SFRP2	HGNC
SGK223	157285	genome.wustl.edu	37	8	8185835	8185835	+	Silent	SNP	C	C	T			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	8	8185835	8185835	C	T	SNP	SGK223	ENST00000330777	human	ensembl	70_37	-1	known	silent	c.2457	p.V819	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	SGK223	Uniprot_genename
SH3BP1	23616	genome.wustl.edu	37	22	38041472	38041472	+	Silent	SNP	C	C	T			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	22	38041472	38041472	C	T	SNP	SH3BP1	ENST00000357436	human	ensembl	70_37	+1	known	silent	c.879	p.I293	0.494	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,pfam_BAR_dom,superfamily_Rho_GTPase_activation_prot,smart_BAR_dom,smart_RhoGAP_dom,pfscan_BAR_dom,pfscan_RhoGAP_dom	-	no_errors	SH3BP1	HGNC
SLC34A2	10568	genome.wustl.edu	37	4	25665907	25665907	+	Missense_Mutation	SNP	G	G	A			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	4	25665907	25665907	G	A	SNP	SLC34A2	ENST00000382051	human	ensembl	70_37	+1	known	missense	c.334	p.V112M	1.000	pfam_Na/Pi_transpt,tigrfam_Na/Pi_transpt	pfam_Na/Pi_transpt,superfamily_ABC_transptrTM_dom_typ1,tigrfam_Na/Pi_transpt	-	no_errors	SLC34A2	HGNC
SLC41A1	254428	genome.wustl.edu	37	1	205779628	205779628	+	RNA	SNP	C	C	G			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	1	205779628	205779628	C	G	SNP	SLC41A1	ENST00000484000	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.361	-	-	-	no_errors	SLC41A1	HGNC
SLITRK1	114798	genome.wustl.edu	37	13	84454243	84454243	+	Missense_Mutation	SNP	A	A	G			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	13	84454243	84454243	A	G	SNP	SLITRK1	ENST00000377084	human	ensembl	70_37	-1	known	missense	c.1400	p.F467S	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK1	HGNC
SMG6	23293	genome.wustl.edu	37	17	1964523	1964523	+	RNA	SNP	C	C	T			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	17	1964523	1964523	C	T	SNP	SMG6	ENST00000570756	human	ensembl	70_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SMG6	HGNC
SNRPD3	6634	genome.wustl.edu	37	22	24964112	24964112	+	Missense_Mutation	SNP	G	G	T			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	22	24964112	24964112	G	T	SNP	SNRPD3	ENST00000215829	human	ensembl	70_37	+1	known	missense	c.287	p.G96V	1.000	superfamily_LSM_dom	pfam_Ribonucl_LSM,superfamily_LSM_dom,smart_Ribonucl_LSM_euk/arc	-	no_errors	SNRPD3	HGNC
STRADB	55437	genome.wustl.edu	37	2	202344886	202344886	+	Silent	SNP	C	C	T			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	2	202344886	202344886	C	T	SNP	STRADB	ENST00000194530	human	ensembl	70_37	+1	known	silent	c.1245	p.Y415	0.437	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	STRADB	HGNC
TMC7	79905	genome.wustl.edu	37	16	19051725	19051725	+	Missense_Mutation	SNP	G	G	A			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	16	19051725	19051725	G	A	SNP	TMC7	ENST00000304381	human	ensembl	70_37	+1	known	missense	c.1294	p.E432K	1.000	NULL	pfam_TMC	-	no_errors	TMC7	HGNC
TMEM117	84216	genome.wustl.edu	37	12	44693454	44693454	+	Missense_Mutation	SNP	A	A	G			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	12	44693454	44693454	A	G	SNP	TMEM117	ENST00000266534	human	ensembl	70_37	+1	known	missense	c.700	p.S234G	1.000	NULL	NULL	-	no_errors	TMEM117	HGNC
TMEM184C	55751	genome.wustl.edu	37	4	148555364	148555364	+	Missense_Mutation	SNP	G	G	T			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	4	148555364	148555364	G	T	SNP	TMEM184C	ENST00000296582	human	ensembl	70_37	+1	known	missense	c.1096	p.D366Y	1.000	NULL	pfam_Ost-alpha	-	no_errors	TMEM184C	HGNC
TMEM52B	120939	genome.wustl.edu	37	12	10342532	10342532	+	Silent	SNP	C	C	A			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	12	10342532	10342532	C	A	SNP	TMEM52B	ENST00000381923	human	ensembl	70_37	+1	known	silent	c.345	p.I115	1.000	NULL	NULL	-	no_errors	TMEM52B	HGNC
TMEM63B	55362	genome.wustl.edu	37	6	44102397	44102397	+	Missense_Mutation	SNP	G	G	T			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	6	44102397	44102397	G	T	SNP	TMEM63B	ENST00000259746	human	ensembl	70_37	+1	known	missense	c.76	p.A26S	1.000	NULL	pfam_DUF221	-	no_errors	TMEM63B	HGNC
USP1	7398	genome.wustl.edu	37	1	62907935	62907935	+	Missense_Mutation	SNP	G	G	A			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	1	62907935	62907935	G	A	SNP	USP1	ENST00000339950	human	ensembl	70_37	+1	known	missense	c.361	p.E121K	1.000	pfam_Peptidase_C19,pfscan_Peptidase_C19	pfam_Peptidase_C19,pfscan_Peptidase_C19	-	no_errors	USP1	HGNC
VPS16	64601	genome.wustl.edu	37	20	2845875	2845875	+	Silent	SNP	C	C	T			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	20	2845875	2845875	C	T	SNP	VPS16	ENST00000380445	human	ensembl	70_37	+1	known	silent	c.2086	p.L696	1.000	pfam_Vps16_C,pirsf_VPS16	pfam_Vps16_N,pfam_Vps16_C,pirsf_VPS16	-	no_errors	VPS16	HGNC
WRNIP1	56897	genome.wustl.edu	37	6	2779557	2779557	+	Silent	SNP	C	C	T			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	6	2779557	2779557	C	T	SNP	WRNIP1	ENST00000380773	human	ensembl	70_37	+1	known	silent	c.1317	p.D439	0.997	NULL	pfam_MgsA_C,pfam_ATPase_AAA_core,pfam_DNA_helicase_Holl-junc_RuvB_N,pfam_ATPase_dyneun-rel_AAA,pfam_DUF815,pfam_IstB_ATP-bd,pfam_ATPase_AAA-2,smart_Znf_Rad18_put,smart_AAA+_ATPase	-	no_errors	WRNIP1	HGNC
ZAN	7455	genome.wustl.edu	37	7	100371474	100371474	+	Missense_Mutation	SNP	G	G	A			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	7	100371474	100371474	G	A	SNP	ZAN	ENST00000546292	human	ensembl	70_37	+1	known	missense	c.5765	p.R1922H	0.705	smart_VWF_type-D	pfam_VWF_type-D,pfam_MAM_dom,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_ConA-like_lec_gl_sf,superfamily_TIL_dom,smart_MAM_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_MAM_dom	-	no_errors	ZAN	HGNC
ZNF174	7727	genome.wustl.edu	37	16	3452170	3452170	+	Missense_Mutation	SNP	G	G	C			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	16	3452170	3452170	G	C	SNP	ZNF174	ENST00000268655	human	ensembl	70_37	+1	known	missense	c.166	p.E56Q	0.996	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,pfscan_Tscrpt_reg_SCAN	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF174	HGNC
ZNF492	57615	genome.wustl.edu	37	19	22847093	22847093	+	Missense_Mutation	SNP	C	C	T			TCGA-JX-A3PZ-01A-11D-A21Q-09	TCGA-JX-A3PZ-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	780c38c5-f1fa-4885-a0f9-ced48cf123c9	a37dd07d-ef81-4183-904e-1cdb09139d9b	19	22847093	22847093	C	T	SNP	ZNF492	ENST00000456783	human	ensembl	70_37	+1	known	missense	c.622	p.R208W	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF492	HGNC
