Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source
ADAM32	203102	genome.wustl.edu	37	8	39080597	39080597	+	Missense_Mutation	SNP	T	T	G			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	8	39080597	39080597	T	G	SNP	ADAM32	ENST00000379907	human	ensembl	70_37	+1	known	missense	c.1365	p.H455Q	0.027	pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,pfscan_Blood-coag_inhib_Disintegrin	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B	-	no_errors	ADAM32	HGNC
ADCY8	114	genome.wustl.edu	37	8	132052022	132052022	+	Silent	SNP	G	G	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	8	132052022	132052022	G	A	SNP	ADCY8	ENST00000286355	human	ensembl	70_37	-1	known	silent	c.558	p.N186	1.000	NULL	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY8	HGNC
ANGPTL1	9068	genome.wustl.edu	37	1	178822864	178822864	+	Silent	SNP	A	A	G			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	1	178822864	178822864	A	G	SNP	ANGPTL1	ENST00000234816	human	ensembl	70_37	-1	known	silent	c.882	p.Y294	0.908	pfam_Fibrinogen_a/b/g_C,superfamily_Fibrinogen_a/b/g_C,smart_Fibrinogen_a/b/g_C	pfam_Fibrinogen_a/b/g_C,superfamily_Fibrinogen_a/b/g_C,smart_Fibrinogen_a/b/g_C	-	no_errors	ANGPTL1	HGNC
APOBEC4	403314	genome.wustl.edu	37	1	183617796	183617796	+	Missense_Mutation	SNP	C	C	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	1	183617796	183617796	C	A	SNP	APOBEC4	ENST00000308641	human	ensembl	70_37	-1	known	missense	c.121	p.A41S	1.000	NULL	pfam_APOBEC_N	-	no_errors	APOBEC4	HGNC
ARHGEF2	9181	genome.wustl.edu	37	1	155920934	155920934	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	1	155920934	155920934	G	A	SNP	ARHGEF2	ENST00000368315	human	ensembl	70_37	-1	known	missense	c.2392	p.P798S	0.811	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain	-	no_errors	ARHGEF2	HGNC
ARID1A	8289	genome.wustl.edu	37	1	27057988	27057988	+	Nonsense_Mutation	SNP	C	C	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	1	27057988	27057988	C	T	SNP	ARID1A	ENST00000324856	human	ensembl	70_37	+1	known	nonsense	c.1696	p.Q566*	1.000	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC
ATP8B3	148229	genome.wustl.edu	37	19	1807256	1807256	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	19	1807256	1807256	C	T	SNP	ATP8B3	ENST00000539485	human	ensembl	70_37	-1	known	missense	c.526	p.D176N	0.087	tigrfam_ATPase_P-typ_Plipid-transl	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_Dehalogen-like_hydro,superfamily_HAD-like_dom,superfamily_ATPase_cation_domN,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_Plipid-transl,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP8B3	HGNC
B3GALT4	8705	genome.wustl.edu	37	6	33245425	33245425	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	6	33245425	33245425	G	A	SNP	B3GALT4	ENST00000451237	human	ensembl	70_37	+1	known	missense	c.229	p.V77M	1.000	NULL	pfam_Glyco_trans_31	-	no_errors	B3GALT4	HGNC
C14orf79	122616	genome.wustl.edu	37	14	105476633	105476633	+	RNA	SNP	G	G	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	14	105476633	105476633	G	T	SNP	C14orf79	ENST00000548178	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	C14orf79	HGNC
C15orf62	643338	genome.wustl.edu	37	15	41062838	41062838	+	Nonsense_Mutation	SNP	C	C	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	15	41062838	41062838	C	T	SNP	C15orf62	ENST00000344320	human	ensembl	70_37	+1	known	nonsense	c.145	p.R49*	0.988	NULL	NULL	-	no_errors	C15orf62	HGNC
CCDC134	79879	genome.wustl.edu	37	22	42209804	42209804	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	22	42209804	42209804	C	T	SNP	CCDC134	ENST00000255784	human	ensembl	70_37	+1	known	missense	c.542	p.P181L	1.000	NULL	NULL	-	no_errors	CCDC134	HGNC
CCDC134	79879	genome.wustl.edu	37	22	42209805	42209805	+	Silent	SNP	A	A	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	22	42209805	42209805	A	T	SNP	CCDC134	ENST00000255784	human	ensembl	70_37	+1	known	silent	c.543	p.P181	0.989	NULL	NULL	-	no_errors	CCDC134	HGNC
CCDC78	124093	genome.wustl.edu	37	16	775082	775082	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	16	775082	775082	G	A	SNP	CCDC78	ENST00000293889	human	ensembl	70_37	-1	known	missense	c.556	p.R186C	0.000	NULL	NULL	-	no_errors	CCDC78	HGNC
CCND1	595	genome.wustl.edu	37	11	69466021	69466021	+	Missense_Mutation	SNP	C	C	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	11	69466021	69466021	C	A	SNP	CCND1	ENST00000227507	human	ensembl	70_37	+1	known	missense	c.859	p.P287T	1.000	NULL	pfam_Cyclin_N,pfam_Cyclin_C,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_A/B/D/E	-	no_errors	CCND1	HGNC
CD163	9332	genome.wustl.edu	37	12	7640635	7640635	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	12	7640635	7640635	C	T	SNP	CD163	ENST00000359156	human	ensembl	70_37	-1	known	missense	c.1469	p.R490H	1.000	pfam_Srcr_rcpt,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_Srcr_rcpt	pfam_Srcr_rcpt,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_Srcr_rcpt,prints_Srcr_rcpt	-	no_errors	CD163	HGNC
CDH10	1008	genome.wustl.edu	37	5	24593378	24593378	+	Silent	SNP	G	G	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	5	24593378	24593378	G	A	SNP	CDH10	ENST00000264463	human	ensembl	70_37	-1	known	silent	c.222	p.Y74	0.986	pfam_Cadherin,superfamily_Cadherin-like	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH10	HGNC
CNTNAP5	129684	genome.wustl.edu	37	2	125281921	125281921	+	Missense_Mutation	SNP	A	A	C			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	2	125281921	125281921	A	C	SNP	CNTNAP5	ENST00000431078	human	ensembl	70_37	+1	known	missense	c.1366	p.N456H	0.990	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP5	HGNC
COL7A1	1294	genome.wustl.edu	37	3	48629870	48629870	+	Missense_Mutation	SNP	T	T	G			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	3	48629870	48629870	T	G	SNP	COL7A1	ENST00000328333	human	ensembl	70_37	-1	known	missense	c.1007	p.Q336P	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Collagen,pfam_Fibronectin_type3,pfam_VWF_A,pfam_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,superfamily_Prot_inh_Kunz-m,smart_VWF_A,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL7A1	HGNC
CROCCP2	84809	genome.wustl.edu	37	1	16945760	16945760	+	RNA	SNP	A	A	G			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	1	16945760	16945760	A	G	SNP	CROCCP2	ENST00000412962	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CROCCP2	HGNC
CROCCP2	84809	genome.wustl.edu	37	1	16957475	16957475	+	RNA	SNP	G	G	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	1	16957475	16957475	G	A	SNP	CROCCP2	ENST00000362058	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	CROCCP2	HGNC
CTNNB1	1499	genome.wustl.edu	37	3	41266098	41266098	+	Missense_Mutation	SNP	A	A	G			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	3	41266098	41266098	A	G	SNP	CTNNB1	ENST00000349496	human	ensembl	70_37	+1	known	missense	c.95	p.D32G	1.000	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo,prints_Beta-catenin	-	no_errors	CTNNB1	HGNC
DCLK3	85443	genome.wustl.edu	37	3	36756965	36756965	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	3	36756965	36756965	G	A	SNP	DCLK3	ENST00000416516	human	ensembl	70_37	-1	known	missense	c.1801	p.R601C	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	DCLK3	HGNC
DMRTC2	63946	genome.wustl.edu	37	19	42351694	42351694	+	Silent	SNP	C	C	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	19	42351694	42351694	C	T	SNP	DMRTC2	ENST00000269945	human	ensembl	70_37	+1	known	silent	c.198	p.C66	1.000	pfam_DM_DNA-bd,superfamily_DM_DNA-bd,smart_DM_DNA-bd,pfscan_DM_DNA-bd	pfam_DM_DNA-bd,superfamily_DM_DNA-bd,smart_DM_DNA-bd,pfscan_DM_DNA-bd	-	no_errors	DMRTC2	HGNC
DNAAF3	352909	genome.wustl.edu	37	19	55672141	55672141	+	Silent	SNP	C	C	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	19	55672141	55672141	C	T	SNP	DNAAF3	ENST00000527223	human	ensembl	70_37	-1	known	silent	c.1119	p.T373	0.002	NULL	NULL	-	no_errors	DNAAF3	HGNC
DNAH2	146754	genome.wustl.edu	37	17	7701562	7701562	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	17	7701562	7701562	G	A	SNP	DNAH2	ENST00000389173	human	ensembl	70_37	+1	known	missense	c.8318	p.R2773H	0.999	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA_core,smart_AAA+_ATPase	-	no_errors	DNAH2	HGNC
ELP2	55250	genome.wustl.edu	37	18	33713236	33713236	+	Silent	SNP	C	C	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	18	33713236	33713236	C	A	SNP	ELP2	ENST00000358232	human	ensembl	70_37	+1	known	silent	c.174	p.T58	0.999	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	ELP2	HGNC
ENSG00000203876	0	genome.wustl.edu	37	10	111702545	111702545	+	Missense_Mutation	SNP	C	C	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	10	111702545	111702545	C	A	SNP	ENSG00000203876	ENST00000369657	human	ensembl	70_37	-1	known	missense	c.194	p.G65V	0.000	NULL	NULL	-	no_errors	RP11-451M19.3	Clone_based_vega_gene
ENSG00000212857	0	genome.wustl.edu	37	GL000212.1	65793	65793	+	Silent	SNP	T	T	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	GL000212.1	65793	65793	T	A	SNP	ENSG00000212857	ENST00000391545	human	ensembl	70_37	+1	known	silent	c.1542	p.A514	NULL	NULL	NULL	-	no_errors	AL356585.1	Clone_based_ensembl_gene
ENSG00000212857	0	genome.wustl.edu	37	GL000212.1	65807	65807	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	GL000212.1	65807	65807	C	T	SNP	ENSG00000212857	ENST00000391545	human	ensembl	70_37	+1	known	missense	c.1556	p.T519M	NULL	NULL	NULL	-	no_errors	AL356585.1	Clone_based_ensembl_gene
ENSG00000212857	0	genome.wustl.edu	37	GL000212.1	65811	65811	+	Silent	SNP	C	C	G			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	GL000212.1	65811	65811	C	G	SNP	ENSG00000212857	ENST00000391545	human	ensembl	70_37	+1	known	silent	c.1560	p.P520	NULL	NULL	NULL	-	no_errors	AL356585.1	Clone_based_ensembl_gene
ENSG00000227148	0	genome.wustl.edu	37	7	62514788	62514788	+	RNA	SNP	C	C	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	7	62514788	62514788	C	T	SNP	ENSG00000227148	ENST00000450891	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.031	-	-	-	no_errors	RP11-196D18.1	Clone_based_vega_gene
ENSG00000259197	0	genome.wustl.edu	37	9	102067846	102067846	+	Silent	SNP	C	C	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	9	102067846	102067846	C	T	SNP	ENSG00000259197	ENST00000409686	human	ensembl	70_37	+1	known	silent	c.453	p.N151	1.000	pfam_F	pfam_F,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT8P11	Uniprot_genename
EYA1	2138	genome.wustl.edu	37	8	72182004	72182004	+	Missense_Mutation	SNP	T	T	C			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	8	72182004	72182004	T	C	SNP	EYA1	ENST00000340726	human	ensembl	70_37	-1	known	missense	c.1021	p.T341A	1.000	pfam_Dehalogen-like_hydro,superfamily_HAD-like_dom,tigrfam_EYA	pfam_Dehalogen-like_hydro,superfamily_HAD-like_dom,tigrfam_EYA	-	no_errors	EYA1	HGNC
FAM182A	284800	genome.wustl.edu	37	20	26061832	26061832	+	Silent	SNP	A	A	C			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	20	26061832	26061832	A	C	SNP	FAM182A	ENST00000246000	human	ensembl	70_37	+1	known	silent	c.184	p.R62	0.200	NULL	NULL	-	no_errors	FAM182A	HGNC
FOXRED2	80020	genome.wustl.edu	37	22	36900295	36900295	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	22	36900295	36900295	G	A	SNP	FOXRED2	ENST00000216187	human	ensembl	70_37	-1	known	missense	c.899	p.P300L	0.805	NULL	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD	-	no_errors	FOXRED2	HGNC
GFPT1	2673	genome.wustl.edu	37	2	69573041	69573041	+	Missense_Mutation	SNP	T	T	G			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	2	69573041	69573041	T	G	SNP	GFPT1	ENST00000357308	human	ensembl	70_37	-1	known	missense	c.1100	p.Y367S	1.000	tigrfam_GlmS_trans	pfam_SIS,pfam_GATase_dom,tigrfam_GlmS_trans	-	no_errors	GFPT1	HGNC
GFPT2	9945	genome.wustl.edu	37	5	179757762	179757762	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	5	179757762	179757762	C	T	SNP	GFPT2	ENST00000253778	human	ensembl	70_37	-1	known	missense	c.472	p.D158N	1.000	pfam_GATase_dom	pfam_SIS,pfam_GATase_dom,tigrfam_GlmS_trans	-	no_errors	GFPT2	HGNC
GMCL1	64395	genome.wustl.edu	37	2	70057063	70057063	+	Missense_Mutation	SNP	A	A	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	2	70057063	70057063	A	T	SNP	GMCL1	ENST00000282570	human	ensembl	70_37	+1	known	missense	c.39	p.R13S	0.339	NULL	pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_errors	GMCL1	HGNC
GNPTAB	79158	genome.wustl.edu	37	12	102179808	102179808	+	Missense_Mutation	SNP	A	A	G			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	12	102179808	102179808	A	G	SNP	GNPTAB	ENST00000299314	human	ensembl	70_37	-1	known	missense	c.553	p.F185L	1.000	NULL	pfam_DMAP1-bd,pfam_Notch_dom,pfam_DUF3184,superfamily_Notch_dom,smart_Notch_dom,pfscan_EF_HAND_2,pfscan_Notch_dom	-	no_errors	GNPTAB	HGNC
GOLGA8O	728047	genome.wustl.edu	37	15	32743123	32743123	+	Missense_Mutation	SNP	C	C	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	15	32743123	32743123	C	A	SNP	GOLGA8O	ENST00000509311	human	ensembl	70_37	-1	novel	missense	c.582	p.K194N	0.095	NULL	NULL	-	no_errors	GOLGA8O	HGNC
GPR78	27201	genome.wustl.edu	37	4	8583293	8583293	+	Missense_Mutation	SNP	T	T	C			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	4	8583293	8583293	T	C	SNP	GPR78	ENST00000382487	human	ensembl	70_37	+1	known	missense	c.584	p.V195A	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR78	HGNC
GTF2F1	2962	genome.wustl.edu	37	19	6380388	6380388	+	Silent	SNP	G	G	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	19	6380388	6380388	G	A	SNP	GTF2F1	ENST00000394456	human	ensembl	70_37	-1	known	silent	c.1458	p.S486	1.000	pfam_TFIIF-alpha	pfam_TFIIF-alpha,superfamily_TFIIF_interaction	-	no_errors	GTF2F1	HGNC
GTF2IRD2P1	401375	genome.wustl.edu	37	7	72664015	72664016	+	RNA	INS	-	-	G			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	7	72664015	72664016	-	G	INS	GTF2IRD2P1	ENST00000425256	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.912:0.964	-	-	-	no_errors	GTF2IRD2P1	HGNC
GYS2	2998	genome.wustl.edu	37	12	21711236	21711236	+	Missense_Mutation	SNP	C	C	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	12	21711236	21711236	C	A	SNP	GYS2	ENST00000261195	human	ensembl	70_37	-1	known	missense	c.1320	p.L440F	0.901	pfam_Glycogen_synth	pfam_Glycogen_synth,pfam_Glyco_trans_1	-	no_errors	GYS2	HGNC
IMPG2	50939	genome.wustl.edu	37	3	100964803	100964803	+	Missense_Mutation	SNP	G	G	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	3	100964803	100964803	G	T	SNP	IMPG2	ENST00000193391	human	ensembl	70_37	-1	known	missense	c.1386	p.H462Q	0.000	NULL	pfam_SEA,smart_SEA,pfscan_EG-like_dom,pfscan_SEA	-	no_errors	IMPG2	HGNC
KCNA6	3742	genome.wustl.edu	37	12	4919236	4919236	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	12	4919236	4919236	C	T	SNP	KCNA6	ENST00000280684	human	ensembl	70_37	+1	known	missense	c.29	p.A10V	1.000	prints_K_chnl_volt-dep_Kv1.6	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_Ion_trans_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.6,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA6	HGNC
KRAS	3845	genome.wustl.edu	37	12	25398257	25398257	+	Missense_Mutation	SNP	A	A	C			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	12	25398257	25398257	A	C	SNP	KRAS	ENST00000256078	human	ensembl	70_37	-1	known	missense	c.62	p.I21R	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	KRAS	HGNC
LIMK2	3985	genome.wustl.edu	37	22	31664175	31664175	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	22	31664175	31664175	G	A	SNP	LIMK2	ENST00000331728	human	ensembl	70_37	+1	known	missense	c.1306	p.A436T	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Znf_LIM,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_PDZ,smart_Znf_LIM,smart_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_LIM,pfscan_PDZ,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LIMK2	HGNC
LOC728741	728741	genome.wustl.edu	37	16	28354457	28354457	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	16	28354457	28354457	G	A	SNP	LOC728741	ENST00000532254	human	ensembl	70_37	-1	novel	missense	c.749	p.P250L	0.047	pfam_NPIP	pfam_NPIP	-	no_errors	A-575C2.4	Uniprot_genename
LOC728888	728888	genome.wustl.edu	37	16	21858734	21858734	+	Missense_Mutation	SNP	C	C	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	16	21858734	21858734	C	A	SNP	LOC728888	ENST00000415645	human	ensembl	70_37	-1	known	missense	c.249	p.W83C	0.018	pfam_NPIP	pfam_NPIP	-	no_errors	61E3.4	Uniprot_genename
LRP5	4041	genome.wustl.edu	37	11	68207255	68207255	+	Silent	SNP	C	C	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	11	68207255	68207255	C	T	SNP	LRP5	ENST00000294304	human	ensembl	70_37	+1	known	silent	c.4359	p.C1453	0.121	pirsf_Low_density_Lipo_rcpt-rel_p5/6	pfam_LDLR_classB_rpt,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDLR_classB_rpt,smart_EG-like_dom,smart_LDrepeatLR_classA_rpt,pirsf_Low_density_Lipo_rcpt-rel_p5/6,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP5	HGNC
LRRC9	341883	genome.wustl.edu	37	14	60411327	60411327	+	Missense_Mutation	SNP	A	A	G			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	14	60411327	60411327	A	G	SNP	LRRC9	ENST00000254271	human	ensembl	70_37	+1	known	missense	c.747	p.I249M	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC9	HGNC
MEFV	4210	genome.wustl.edu	37	16	3297128	3297128	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	16	3297128	3297128	C	T	SNP	MEFV	ENST00000219596	human	ensembl	70_37	-1	known	missense	c.1475	p.G492E	0.000	NULL	pfam_DAPIN,pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl_sf,superfamily_DEATH-like,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_DAPIN,pfscan_Znf_B-box,prints_Butyrophylin	-	no_errors	MEFV	HGNC
MKL2	57496	genome.wustl.edu	37	16	14341226	14341226	+	Missense_Mutation	SNP	G	G	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	16	14341226	14341226	G	T	SNP	MKL2	ENST00000341243	human	ensembl	70_37	+1	known	missense	c.2076	p.Q692H	1.000	NULL	pfam_RPEL_repeat,pfam_SAP_DNA-bd,smart_RPEL_repeat,smart_SAP_DNA-bd,pfscan_RPEL_repeat,pfscan_SAP_DNA-bd	-	no_errors	MKL2	HGNC
MTMR10	54893	genome.wustl.edu	37	15	31239429	31239429	+	Silent	SNP	G	G	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	15	31239429	31239429	G	T	SNP	MTMR10	ENST00000435680	human	ensembl	70_37	-1	known	silent	c.1452	p.S484	0.000	NULL	pfam_Myotubularin_assoc,pfam_Myotub-related	-	no_errors	MTMR10	HGNC
MUC12	10071	genome.wustl.edu	37	7	100643155	100643155	+	Missense_Mutation	SNP	A	A	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	7	100643155	100643155	A	T	SNP	MUC12	ENST00000379442	human	ensembl	70_37	+1	known	missense	c.9740	p.K3247I	0.000	NULL	pfam_SEA	-	no_errors	MUC12	HGNC
MYCBP2	23077	genome.wustl.edu	37	13	77677374	77677374	+	RNA	SNP	C	C	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	13	77677374	77677374	C	A	SNP	MYCBP2	ENST00000462987	human	ensembl	70_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MYCBP2	HGNC
NLGN4X	57502	genome.wustl.edu	37	X	5821413	5821413	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	X	5821413	5821413	G	A	SNP	NLGN4X	ENST00000381093	human	ensembl	70_37	-1	known	missense	c.1366	p.R456W	0.278	pfam_CarbesteraseB,prints_Neuroligin	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Neuroligin	-	no_errors	NLGN4X	HGNC
OR13A1	79290	genome.wustl.edu	37	10	45799325	45799325	+	Silent	SNP	C	C	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	10	45799325	45799325	C	A	SNP	OR13A1	ENST00000374401	human	ensembl	70_37	-1	known	silent	c.546	p.L182	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR13A1	HGNC
OTUD5	55593	genome.wustl.edu	37	X	48801543	48801543	+	Missense_Mutation	SNP	T	T	C			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	X	48801543	48801543	T	C	SNP	OTUD5	ENST00000156084	human	ensembl	70_37	-1	known	missense	c.596	p.Q199R	1.000	NULL	pfam_OTU,pfscan_OTU	-	no_errors	OTUD5	HGNC
PCDH15	65217	genome.wustl.edu	37	10	55568613	55568613	+	Nonsense_Mutation	SNP	C	C	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	10	55568613	55568613	C	A	SNP	PCDH15	ENST00000395445	human	ensembl	70_37	-1	novel	nonsense	c.5197	p.E1733*	0.161	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDH15	HGNC
PFKFB1	5207	genome.wustl.edu	37	X	54985325	54985325	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	X	54985325	54985325	G	A	SNP	PFKFB1	ENST00000375006	human	ensembl	70_37	-1	known	missense	c.418	p.R140W	0.936	pfam_6Phosfructo_kin,pfam_Zeta_toxin_domain,pirsf_Bifunct_6PFK/fruc_bisP_Ptase,prints_6Pfruct_kin	pfam_6Phosfructo_kin,pfam_His_Pase_superF_clade-1,pfam_Zeta_toxin_domain,smart_His_Pase_superF_clade-1,pirsf_Bifunct_6PFK/fruc_bisP_Ptase,prints_6Pfruct_kin	-	no_errors	PFKFB1	HGNC
PIK3CA	5290	genome.wustl.edu	37	3	178916726	178916726	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	3	178916726	178916726	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	70_37	+1	known	missense	c.113	p.R38H	1.000	pfam_PI3K_adapt-bd_dom,smart_PI3K_adapt-bd_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC
PKHD1	5314	genome.wustl.edu	37	6	51619602	51619602	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	6	51619602	51619602	C	T	SNP	PKHD1	ENST00000371117	human	ensembl	70_37	-1	known	missense	c.8777	p.R2926Q	0.402	NULL	pfam_IPT_TIG_rcpt,pfam_G8_domain,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,smart_IPT_TIG_rcpt,smart_PbH1	-	no_errors	PKHD1	HGNC
PLD1	5337	genome.wustl.edu	37	3	171427491	171427491	+	Missense_Mutation	SNP	A	A	G			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	3	171427491	171427491	A	G	SNP	PLD1	ENST00000351298	human	ensembl	70_37	-1	known	missense	c.920	p.I307T	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pirsf_PLipase_D_euk	pfam_Phox,pfam_PLipase_D/transphosphatidylase,pfam_Pleckstrin_homology,superfamily_Phox,smart_Phox,smart_Pleckstrin_homology,smart_PLipase_D/transphosphatidylase,pirsf_PLipase_D_euk,pfscan_Phox,pfscan_PLipase_D/transphosphatidylase	-	no_errors	PLD1	HGNC
PLXNB2	23654	genome.wustl.edu	37	22	50719367	50719367	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	22	50719367	50719367	C	T	SNP	PLXNB2	ENST00000359337	human	ensembl	70_37	-1	known	missense	c.3799	p.V1267M	0.999	NULL	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT_TIG_rcpt,pfam_Semaphorin/CD100_Ag,pfam_Plexin_repeat,superfamily_Semaphorin/CD100_Ag,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,smart_IPT_TIG_rcpt,pfscan_Semaphorin/CD100_Ag	-	no_errors	PLXNB2	HGNC
POLA1	5422	genome.wustl.edu	37	X	24745188	24745188	+	Missense_Mutation	SNP	C	C	G			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	X	24745188	24745188	C	G	SNP	POLA1	ENST00000379068	human	ensembl	70_37	+1	known	missense	c.1531	p.Q511E	1.000	pfam_DNA-dir_DNA_pol_B_exonuc,superfamily_RNaseH-like_dom,tigrfam_DNA-dir_DNA_pol_B_pol2	pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_DNA-dir_DNA_pol_B_exonuc,pfam_Znf_DNA-dir_DNA_pol_B_alpha,pfam_DNA_pol_a_cat_su_N,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B,prints_DNA-dir_DNA_pol_B,tigrfam_DNA-dir_DNA_pol_B_pol2	-	no_errors	POLA1	HGNC
PPFIA3	8541	genome.wustl.edu	37	19	49632647	49632647	+	Missense_Mutation	SNP	G	G	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	19	49632647	49632647	G	T	SNP	PPFIA3	ENST00000334186	human	ensembl	70_37	+1	known	missense	c.518	p.R173L	1.000	NULL	pfam_SAM_2,pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	PPFIA3	HGNC
PPIAL4G	644591	genome.wustl.edu	37	1	143767596	143767596	+	Missense_Mutation	SNP	C	C	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	1	143767596	143767596	C	A	SNP	PPIAL4G	ENST00000419275	human	ensembl	70_37	-1	known	missense	c.253	p.D85Y	0.997	pfam_Cyclophilin-like_PPIase_dom,superfamily_Cyclophilin-like_PPIase_dom,pfscan_Cyclophilin-like_PPIase_dom	pfam_Cyclophilin-like_PPIase_dom,superfamily_Cyclophilin-like_PPIase_dom,pfscan_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	PPIAL4G	HGNC
PPIP5K2	23262	genome.wustl.edu	37	5	102490374	102490375	+	Frame_Shift_Ins	INS	-	-	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	5	102490374	102490375	-	T	INS	PPIP5K2	ENST00000358359	human	ensembl	70_37	+1	known	frame_shift_ins	c.1218_1219	p.D408fs	0.992:1.000	pfam_His_Pase_superF_clade-2	pfam_His_Pase_superF_clade-2	-	no_errors	PPIP5K2	HGNC
PRR5L	79899	genome.wustl.edu	37	11	36476882	36476882	+	RNA	SNP	G	G	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	11	36476882	36476882	G	A	SNP	PRR5L	ENST00000530627	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PRR5L	HGNC
PTEN	5728	genome.wustl.edu	37	10	89690847	89690847	+	Splice_Site	SNP	G	G	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	10	89690847	89690847	G	T	SNP	PTEN	ENST00000371953	human	ensembl	70_37	+1	known	splice_site	c.253+1	e4+1	1.000	-	-	-	no_errors	PTEN	HGNC
PTPN4	5775	genome.wustl.edu	37	2	120725438	120725438	+	Missense_Mutation	SNP	C	C	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	2	120725438	120725438	C	A	SNP	PTPN4	ENST00000263708	human	ensembl	70_37	+1	known	missense	c.2584	p.L862I	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-3/4,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM_N,pfam_PDZ,pfam_FERM-adjacent,superfamily_FERM_central,superfamily_PDZ,smart_Band_41_domain,smart_PDZ,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-3/4,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam,prints_Ez/rad/moesin,pfscan_FERM_domain,pfscan_PDZ,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN4	HGNC
PTPRC	5788	genome.wustl.edu	37	1	198721850	198721850	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	1	198721850	198721850	C	T	SNP	PTPRC	ENST00000442510	human	ensembl	70_37	+1	known	missense	c.3458	p.S1153F	0.000	pirsf_Leukocyte_common_ag,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	pirsf_Leukocyte_common_ag,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Leukocyte_common_ag,pfam_PTP_recept_N,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRC	HGNC
RASGRP2	10235	genome.wustl.edu	37	11	64496388	64496388	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	11	64496388	64496388	C	T	SNP	RASGRP2	ENST00000377494	human	ensembl	70_37	-1	known	missense	c.1718	p.R573H	0.883	NULL	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,smart_EF_hand_Ca-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_EF_HAND_2,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RASGRP2	HGNC
RERGL	79785	genome.wustl.edu	37	12	18234322	18234322	+	Missense_Mutation	SNP	G	G	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	12	18234322	18234322	G	T	SNP	RERGL	ENST00000229002	human	ensembl	70_37	-1	known	missense	c.421	p.L141M	0.996	pfam_Small_GTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type	pfam_Small_GTPase,pfam_MIRO-like,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type	-	no_errors	RERGL	HGNC
SCARA5	286133	genome.wustl.edu	37	8	27737165	27737165	+	Silent	SNP	C	C	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	8	27737165	27737165	C	T	SNP	SCARA5	ENST00000354914	human	ensembl	70_37	-1	known	silent	c.1272	p.K424	1.000	pfam_Srcr_rcpt,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_Srcr_rcpt	pfam_Srcr_rcpt,pfam_Collagen,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,prints_Srcr_rcpt,pfscan_Srcr_rcpt	-	no_errors	SCARA5	HGNC
SF3B3	23450	genome.wustl.edu	37	16	70597901	70597901	+	Missense_Mutation	SNP	A	A	G			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	16	70597901	70597901	A	G	SNP	SF3B3	ENST00000302516	human	ensembl	70_37	+1	known	missense	c.2411	p.H804R	1.000	superfamily_WD40_repeat_dom	pfam_Cleavage/polyA-sp_fac_asu_C,superfamily_WD40_repeat_dom	-	no_errors	SF3B3	HGNC
SGSM3	27352	genome.wustl.edu	37	22	40800404	40800404	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	22	40800404	40800404	C	T	SNP	SGSM3	ENST00000248929	human	ensembl	70_37	+1	known	missense	c.311	p.S104F	1.000	superfamily_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,pfam_Run,pfam_SH3_domain,pfam_SH3_2,superfamily_Rab-GTPase-TBC_dom,superfamily_SH3_domain,smart_Rab-GTPase-TBC_dom,smart_SH3_domain,smart_Run,pfscan_Run,pfscan_SH3_domain,pfscan_Rab-GTPase-TBC_dom	-	no_errors	SGSM3	HGNC
SNHG14	0	genome.wustl.edu	37	15	25446309	25446309	+	RNA	SNP	T	T	C			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	15	25446309	25446309	T	C	SNP	SNHG14	ENST00000424208	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNHG14	HGNC
SPOP	8405	genome.wustl.edu	37	17	47696599	47696599	+	Missense_Mutation	SNP	T	T	C			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	17	47696599	47696599	T	C	SNP	SPOP	ENST00000347630	human	ensembl	70_37	-1	known	missense	c.349	p.M117V	1.000	pfam_MATH,superfamily_TRAF-like,smart_MATH,pfscan_MATH	pfam_BTB_POZ,pfam_MATH,superfamily_TRAF-like,superfamily_BTB/POZ_fold,smart_MATH,smart_BTB/POZ-like,pfscan_BTB/POZ-like,pfscan_MATH	-	no_errors	SPOP	HGNC
SVOPL	136306	genome.wustl.edu	37	7	138279227	138279228	+	RNA	INS	-	-	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	7	138279227	138279228	-	A	INS	SVOPL	ENST00000463557	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.002:0.000	-	-	-	no_errors	SVOPL	HGNC
SYNE1	23345	genome.wustl.edu	37	6	152738082	152738082	+	Missense_Mutation	SNP	C	C	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	6	152738082	152738082	C	A	SNP	SYNE1	ENST00000265368	human	ensembl	70_37	-1	known	missense	c.5490	p.L1830F	0.827	superfamily_Calpain_domain_III,superfamily_ABC_transptrTM_dom_typ1	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC_transptrTM_dom_typ1,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC
TAB3	257397	genome.wustl.edu	37	X	30870896	30870896	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	X	30870896	30870896	G	A	SNP	TAB3	ENST00000288422	human	ensembl	70_37	-1	known	missense	c.1709	p.T570M	0.997	NULL	pfam_CUE,pfam_Znf_RanBP2,superfamily_UBA-like,smart_CUE,smart_Znf_RanBP2,pfscan_CUE,pfscan_Znf_RanBP2	-	no_errors	TAB3	HGNC
TENM4	26011	genome.wustl.edu	37	11	78601032	78601032	+	Silent	SNP	C	C	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	11	78601032	78601032	C	T	SNP	TENM4	ENST00000278550	human	ensembl	70_37	-1	known	silent	c.882	p.P294	0.004	pfam_Ten_N	pfam_Ten_N,pfam_EGF_extracell,pfam_YD,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM4	HGNC
TPSAB1	7177	genome.wustl.edu	37	16	1291685	1291685	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	16	1291685	1291685	G	A	SNP	TPSAB1	ENST00000562675	human	ensembl	70_37	+1	known	missense	c.484	p.D162N	0.000	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6,prints_Peptidase_S1A	-	no_errors	TPSAB1	HGNC
TRRAP	8295	genome.wustl.edu	37	7	98581869	98581869	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	7	98581869	98581869	G	A	SNP	TRRAP	ENST00000359863	human	ensembl	70_37	+1	known	missense	c.9188	p.R3063Q	1.000	pfam_PIK-rel_kinase_FAT,pfscan_PIK_FAT	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	TRRAP	HGNC
USH2A	7399	genome.wustl.edu	37	1	215901724	215901724	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	1	215901724	215901724	C	T	SNP	USH2A	ENST00000366943	human	ensembl	70_37	-1	known	missense	c.11714	p.R3905H	1.000	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC
ZBTB47	92999	genome.wustl.edu	37	3	42700448	42700448	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	3	42700448	42700448	G	A	SNP	ZBTB47	ENST00000232974	human	ensembl	70_37	+1	known	missense	c.601	p.G201S	0.004	NULL	pfam_Znf_C2H2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB47	HGNC
ZDHHC11B	653082	genome.wustl.edu	37	5	711974	711974	+	RNA	SNP	T	T	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	5	711974	711974	T	A	SNP	ZDHHC11B	ENST00000522356	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZDHHC11B	HGNC
ZEB2	9839	genome.wustl.edu	37	2	145157710	145157710	+	Frame_Shift_Del	DEL	G	G	-			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	2	145157710	145157710	G	-	DEL	ZEB2	ENST00000303660	human	ensembl	70_37	-1	known	frame_shift_del	c.1044	p.K349fs	1.000	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeodomain,pfscan_Znf_C2H2	-	no_errors	ZEB2	HGNC
ZNF518A	9849	genome.wustl.edu	37	10	97918540	97918540	+	RNA	SNP	G	G	A			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	10	97918540	97918540	G	A	SNP	ZNF518A	ENST00000316045	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.009	-	-	-	no_errors	ZNF518A	HGNC
ZNF720	124411	genome.wustl.edu	37	16	31766511	31766511	+	Missense_Mutation	SNP	G	G	T			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	16	31766511	31766511	G	T	SNP	ZNF720	ENST00000399681	human	ensembl	70_37	+1	known	missense	c.899	p.R300I	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF720	HGNC
ZNF729	100287226	genome.wustl.edu	37	19	22499442	22499442	+	Missense_Mutation	SNP	C	C	G			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	19	22499442	22499442	C	G	SNP	ZNF729	ENST00000601693	human	ensembl	70_37	+1	novel	missense	c.3223	p.P1075A	0.994	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF729	HGNC
ZNF733P	643955	genome.wustl.edu	37	7	62752415	62752416	+	RNA	INS	-	-	C			TCGA-JW-A5VH-01A-11D-A28B-09	TCGA-JW-A5VH-10A-01D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f832ad5-ec72-488b-b55b-1659b733f490	8b53735f-6dfe-4771-82ed-13bd7cae1746	7	62752415	62752416	-	C	INS	ZNF733P	ENST00000331425	human	ensembl	70_37	-1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	ZNF733P	HGNC
