Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source
ACTR2	10097	genome.wustl.edu	37	2	65473736	65473736	+	Nonsense_Mutation	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	2	65473736	65473736	C	T	SNP	ACTR2	ENST00000377982	human	ensembl	70_37	+1	known	nonsense	c.253	p.R85*	0.990	pfam_Actin-like,smart_Actin-like	pfam_Actin-like,smart_Actin-like,prints_Actin-like	-	no_errors	ACTR2	HGNC
ADH6	130	genome.wustl.edu	37	4	100129851	100129851	+	Nonsense_Mutation	SNP	C	C	A			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	4	100129851	100129851	C	A	SNP	ADH6	ENST00000394899	human	ensembl	70_37	-1	known	nonsense	c.802	p.E268*	1.000	pfam_ADH_C,smart_PKS_ER	pfam_ADH_GroES-like,pfam_ADH_C,superfamily_GroES-like,smart_PKS_ER	-	no_errors	ADH6	HGNC
ANAPC7	51434	genome.wustl.edu	37	12	110819749	110819749	+	Missense_Mutation	SNP	G	G	C			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	12	110819749	110819749	G	C	SNP	ANAPC7	ENST00000455511	human	ensembl	70_37	-1	known	missense	c.1042	p.H348D	1.000	smart_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_2,pfam_TPR-1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	ANAPC7	HGNC
ARID2	196528	genome.wustl.edu	37	12	46245832	46245832	+	Nonsense_Mutation	SNP	C	C	G			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	12	46245832	46245832	C	G	SNP	ARID2	ENST00000334344	human	ensembl	70_37	+1	known	nonsense	c.3926	p.S1309*	1.000	NULL	pfam_ARID/BRIGHT_DNA-bd,pfam_DNA-bd_RFX,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID2	HGNC
ARID2	196528	genome.wustl.edu	37	12	46246080	46246080	+	Missense_Mutation	SNP	C	C	G			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	12	46246080	46246080	C	G	SNP	ARID2	ENST00000334344	human	ensembl	70_37	+1	known	missense	c.4174	p.P1392A	1.000	NULL	pfam_ARID/BRIGHT_DNA-bd,pfam_DNA-bd_RFX,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID2	HGNC
ATF7IP	55729	genome.wustl.edu	37	12	14613980	14613980	+	Nonsense_Mutation	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	12	14613980	14613980	C	T	SNP	ATF7IP	ENST00000261168	human	ensembl	70_37	+1	known	nonsense	c.2710	p.R904*	0.992	NULL	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	ATF7IP	HGNC
ATG9B	285973	genome.wustl.edu	37	7	150721408	150721408	+	RNA	SNP	G	G	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	7	150721408	150721408	G	T	SNP	ATG9B	ENST00000377974	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.935	-	-	-	no_errors	ATG9B	HGNC
BATF	10538	genome.wustl.edu	37	14	76012949	76012949	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	14	76012949	76012949	G	A	SNP	BATF	ENST00000286639	human	ensembl	70_37	+1	known	missense	c.313	p.E105K	1.000	NULL	pfam_bZIP,superfamily_Euk_TF_DNA-bd,smart_bZIP,pfscan_bZIP,prints_Leuzip_Fos	-	no_errors	BATF	HGNC
CALN1	83698	genome.wustl.edu	37	7	71252834	71252834	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	7	71252834	71252834	C	T	SNP	CALN1	ENST00000395275	human	ensembl	70_37	-1	known	missense	c.712	p.A238T	1.000	NULL	pfam_EF-hand,smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	-	no_errors	CALN1	HGNC
CARM1	10498	genome.wustl.edu	37	19	11015736	11015736	+	Missense_Mutation	SNP	G	G	C			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	19	11015736	11015736	G	C	SNP	CARM1	ENST00000327064	human	ensembl	70_37	+1	known	missense	c.330	p.Q110H	1.000	pfam_Histone-Arg_MeTrfase_N	pfam_Histone-Arg_MeTrfase_N,pfam_Arg_MeTrfase,pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_Small_mtfrase_dom,pfam_tRNA_mo5U34_MeTrfase,pfam_Methyltransf_11	-	no_errors	CARM1	HGNC
CBX8	57332	genome.wustl.edu	37	17	77768758	77768758	+	Frame_Shift_Del	DEL	G	G	-			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	17	77768758	77768758	G	-	DEL	CBX8	ENST00000269385	human	ensembl	70_37	-1	known	frame_shift_del	c.846	p.R283fs	1.000	NULL	pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	-	no_errors	CBX8	HGNC
CCDC175	729665	genome.wustl.edu	37	14	60004827	60004827	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	14	60004827	60004827	C	T	SNP	CCDC175	ENST00000281581	human	ensembl	70_37	-1	known	missense	c.1537	p.E513K	0.117	NULL	superfamily_Prefoldin	-	no_errors	CCDC175	HGNC
COL5A3	50509	genome.wustl.edu	37	19	10088308	10088308	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	19	10088308	10088308	C	T	SNP	COL5A3	ENST00000264828	human	ensembl	70_37	-1	known	missense	c.3088	p.E1030K	0.147	NULL	pfam_Collagen,pfam_Fib_collagen_C,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL5A3	HGNC
DACT1	51339	genome.wustl.edu	37	14	59113812	59113812	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	14	59113812	59113812	G	A	SNP	DACT1	ENST00000335867	human	ensembl	70_37	+1	known	missense	c.2471	p.R824H	1.000	NULL	NULL	-	no_errors	DACT1	HGNC
DCHS2	54798	genome.wustl.edu	37	4	155155736	155155736	+	Silent	SNP	G	G	A			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	4	155155736	155155736	G	A	SNP	DCHS2	ENST00000357232	human	ensembl	70_37	-1	known	silent	c.8703	p.I2901	0.000	NULL	pfam_Cadherin,pfam_HTH_CenpB_DNA-bd_dom,superfamily_Cadherin-like,superfamily_Homeodomain-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS2	HGNC
DNAAF1	123872	genome.wustl.edu	37	16	84199549	84199549	+	Missense_Mutation	SNP	G	G	C			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	16	84199549	84199549	G	C	SNP	DNAAF1	ENST00000378553	human	ensembl	70_37	+1	known	missense	c.1024	p.E342Q	0.704	NULL	NULL	-	no_errors	DNAAF1	HGNC
DNAH8	1769	genome.wustl.edu	37	6	38840902	38840902	+	Silent	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	6	38840902	38840902	C	T	SNP	DNAH8	ENST00000359357	human	ensembl	70_37	+1	known	silent	c.6807	p.L2269	0.556	smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,smart_AAA+_ATPase	-	no_errors	DNAH8	HGNC
DSCAM	1826	genome.wustl.edu	37	21	41516627	41516627	+	Missense_Mutation	SNP	A	A	G			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	21	41516627	41516627	A	G	SNP	DSCAM	ENST00000400454	human	ensembl	70_37	-1	known	missense	c.3050	p.I1017T	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub2,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	DSCAM	HGNC
EIF1AX	1964	genome.wustl.edu	37	X	20156734	20156734	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	X	20156734	20156734	C	T	SNP	EIF1AX	ENST00000379607	human	ensembl	70_37	-1	known	missense	c.23	p.G8E	1.000	superfamily_NA-bd_OB-fold-like	pfam_RNA-binding_domain_S1_IF1,superfamily_NA-bd_OB-fold-like,smart_TIF_eIF-1A,pfscan_RNA-binding_domain_S1_IF1,tigrfam_TIF_eIF-1A	-	no_errors	EIF1AX	HGNC
ENSG00000232783	0	genome.wustl.edu	37	3	197838353	197838353	+	RNA	SNP	G	G	C			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	3	197838353	197838353	G	C	SNP	ENSG00000232783	ENST00000419104	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	AC073135.3	Clone_based_vega_gene
ENSG00000244117	0	genome.wustl.edu	37	7	63539443	63539443	+	RNA	SNP	G	G	A			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	7	63539443	63539443	G	A	SNP	ENSG00000244117	ENST00000430271	human	ensembl	70_37	+1	putative	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-3N2.1	Clone_based_vega_gene
ENSG00000268194	0	genome.wustl.edu	37	2	121223347	121223347	+	Missense_Mutation	SNP	G	G	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	2	121223347	121223347	G	T	SNP	ENSG00000268194	ENST00000593290	human	ensembl	70_37	-1	known	missense	c.340	p.L114M	0.000	NULL	NULL	-	no_errors	FLJ14816	Uniprot_genename
EPHA5	2044	genome.wustl.edu	37	4	66189873	66189873	+	Missense_Mutation	SNP	C	C	G			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	4	66189873	66189873	C	G	SNP	EPHA5	ENST00000273854	human	ensembl	70_37	-1	known	missense	c.3073	p.E1025Q	1.000	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pirsf_Tyr_kinase_ephrin_rcpt,pfscan_SAM	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_cat_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pirsf_Tyr_kinase_ephrin_rcpt,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA5	HGNC
ERC2	26059	genome.wustl.edu	37	3	55543687	55543687	+	RNA	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	3	55543687	55543687	C	T	SNP	ERC2	ENST00000484530	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ERC2	HGNC
FASTK	10922	genome.wustl.edu	37	7	150774001	150774001	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	7	150774001	150774001	G	A	SNP	FASTK	ENST00000297532	human	ensembl	70_37	-1	known	missense	c.1541	p.P514L	1.000	pfam_RAP,smart_RAP	pfam_FAST_2,pfam_FAST_Leu-rich,pfam_RAP,smart_RAP	-	no_errors	FASTK	HGNC
FBXO41	150726	genome.wustl.edu	37	2	73491609	73491609	+	Missense_Mutation	SNP	C	C	G			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	2	73491609	73491609	C	G	SNP	FBXO41	ENST00000295133	human	ensembl	70_37	-1	known	missense	c.1786	p.E596Q	0.990	NULL	superfamily_F-box_dom_cyclin-like	-	no_errors	FBXO41	HGNC
GALC	2581	genome.wustl.edu	37	14	88452831	88452831	+	Splice_Site	SNP	A	A	G			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	14	88452831	88452831	A	G	SNP	GALC	ENST00000261304	human	ensembl	70_37	-1	known	splice_site	c.442+2	e4+2	1.000	-	-	-	no_errors	GALC	HGNC
GLIS3	169792	genome.wustl.edu	37	9	3827920	3827920	+	RNA	SNP	G	G	A			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	9	3827920	3827920	G	A	SNP	GLIS3	ENST00000461870	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	GLIS3	HGNC
GPC5	2262	genome.wustl.edu	37	13	92380901	92380901	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	13	92380901	92380901	C	T	SNP	GPC5	ENST00000377067	human	ensembl	70_37	+1	known	missense	c.1136	p.T379M	0.992	pfam_Glypican	pfam_Glypican	-	no_errors	GPC5	HGNC
HELT	391723	genome.wustl.edu	37	4	185940974	185940975	+	Frame_Shift_Ins	INS	-	-	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	4	185940974	185940975	-	T	INS	HELT	ENST00000338875	human	ensembl	70_37	+1	known	frame_shift_ins	c.461_462	p.P156fs	1.000:0.997	smart_HLH_dom	pfam_HLH_dom,pfam_Orange,superfamily_HLH_dom,smart_HLH_dom,pfscan_Orange,pfscan_HLH_dom	-	no_errors	HELT	HGNC
HELT	391723	genome.wustl.edu	37	4	185940979	185940979	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	4	185940979	185940979	C	T	SNP	HELT	ENST00000338875	human	ensembl	70_37	+1	known	missense	c.466	p.P156S	1.000	smart_HLH_dom	pfam_HLH_dom,pfam_Orange,superfamily_HLH_dom,smart_HLH_dom,pfscan_Orange,pfscan_HLH_dom	-	no_errors	HELT	HGNC
HLA-B	3106	genome.wustl.edu	37	6	31324878	31324879	+	Frame_Shift_Ins	INS	-	-	CA			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	6	31324878	31324879	-	CA	INS	HLA-B	ENST00000412585	human	ensembl	70_37	-1	known	frame_shift_ins	c.58_57	p.T19fs	0.202:0.408	NULL	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,pfam_MHC_I_a_C,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like,prints_MHC_I_a_a1/a2	-	no_errors	HLA-B	HGNC
HSD17B4	3295	genome.wustl.edu	37	5	118813176	118813176	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	5	118813176	118813176	G	A	SNP	HSD17B4	ENST00000256216	human	ensembl	70_37	+1	known	missense	c.414	p.M138I	1.000	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,smart_PKS/FAS_KR,prints_Glc/ribitol_DH	pfam_MaoC_deHydtase,pfam_DH_sc/Rdtase_SDR,pfam_SCP2_sterol-bd_dom,pfam_PKS_KR,superfamily_SCP2_sterol-bd_dom,smart_PKS/FAS_KR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR,prints_DHB_DH	-	no_errors	HSD17B4	HGNC
IL16	3603	genome.wustl.edu	37	15	81517900	81517900	+	Missense_Mutation	SNP	G	G	C			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	15	81517900	81517900	G	C	SNP	IL16	ENST00000302987	human	ensembl	70_37	+1	known	missense	c.160	p.E54Q	0.997	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,prints_Interleukin-16	-	no_errors	IL16	HGNC
IL1F10	84639	genome.wustl.edu	37	2	113832909	113832909	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	2	113832909	113832909	C	T	SNP	IL1F10	ENST00000337569	human	ensembl	70_37	+1	known	missense	c.427	p.R143C	0.231	pfam_Interleukin_1,superfamily_Cytokine_IL1-like,smart_Interleukin_1	pfam_Interleukin_1,superfamily_Cytokine_IL1-like,smart_Interleukin_1,prints_Interleukin_1,prints_InterleukinIL1B	-	no_errors	IL1F10	HGNC
IL4R	3566	genome.wustl.edu	37	16	27352391	27352391	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	16	27352391	27352391	G	A	SNP	IL4R	ENST00000563926	human	ensembl	70_37	+1	known	missense	c.71	p.G24E	0.029	NULL	NULL	-	no_errors	IL4R	HGNC
IPO11	51194	genome.wustl.edu	37	5	61747703	61747703	+	Silent	SNP	T	T	C			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	5	61747703	61747703	T	C	SNP	IPO11	ENST00000409296	human	ensembl	70_37	+1	known	silent	c.579	p.H193	1.000	superfamily_ARM-type_fold	pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	IPO11	HGNC
JMJD1C	221037	genome.wustl.edu	37	10	64953104	64953104	+	Splice_Site	SNP	C	C	G			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	10	64953104	64953104	C	G	SNP	JMJD1C	ENST00000399262	human	ensembl	70_37	-1	known	splice_site	c.5862+1	e15+1	1.000	-	-	-	no_errors	JMJD1C	HGNC
KAT6A	7994	genome.wustl.edu	37	8	41798922	41798922	+	Missense_Mutation	SNP	G	G	C			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	8	41798922	41798922	G	C	SNP	KAT6A	ENST00000265713	human	ensembl	70_37	-1	known	missense	c.2477	p.S826C	1.000	NULL	pfam_MOZ_SAS,pfam_Znf_PHD-finger,superfamily_Acyl_CoA_acyltransferase,superfamily_Znf_FYVE_PHD,smart_Histone_H1/H5,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	KAT6A	HGNC
KCNJ14	3770	genome.wustl.edu	37	19	48965361	48965361	+	Missense_Mutation	SNP	G	G	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	19	48965361	48965361	G	T	SNP	KCNJ14	ENST00000342291	human	ensembl	70_37	+1	known	missense	c.380	p.C127F	1.000	pfam_K_chnl_inward-rec_Kir,pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir	-	no_errors	KCNJ14	HGNC
KIAA1009	22832	genome.wustl.edu	37	6	84884962	84884962	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	6	84884962	84884962	C	T	SNP	KIAA1009	ENST00000403245	human	ensembl	70_37	-1	known	missense	c.1768	p.E590K	0.138	NULL	NULL	-	no_errors	KIAA1009	HGNC
LILRB3	11025	genome.wustl.edu	37	19	54726628	54726628	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	19	54726628	54726628	C	T	SNP	LILRB3	ENST00000346401	human	ensembl	70_37	-1	known	missense	c.61	p.V21M	0.000	NULL	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	LILRB3	HGNC
LMBRD1	55788	genome.wustl.edu	37	6	70462177	70462177	+	Missense_Mutation	SNP	C	C	A			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	6	70462177	70462177	C	A	SNP	LMBRD1	ENST00000370577	human	ensembl	70_37	-1	known	missense	c.379	p.D127Y	1.000	pfam_LMBR1-like_membr_prot	pfam_LMBR1-like_membr_prot	-	no_errors	LMBRD1	HGNC
LINC00948	100507027	genome.wustl.edu	37	10	61496974	61496974	+	RNA	SNP	G	G	A			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	10	61496974	61496974	G	A	SNP	M1	ENST00000414264	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.013	-	-	-	no_errors	RP11-59J5.1	Clone_based_vega_gene
MAN2B2	23324	genome.wustl.edu	37	4	6596327	6596327	+	Missense_Mutation	SNP	A	A	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	4	6596327	6596327	A	T	SNP	MAN2B2	ENST00000285599	human	ensembl	70_37	+1	known	missense	c.925	p.I309F	1.000	pfam_Glyco_hydro_38_core,superfamily_Glyco_hydro/deAcase_b/a-brl	pfam_Glyco_hydro_38_core,pfam_Glyco_hydro_38_C,pfam_Glyco_hydro_38_cen_dom,superfamily_Glyco_hydro-type_carb-bd,superfamily_Glyco_hydro/deAcase_b/a-brl,smart_Glyco_hydro_38_cen_dom	-	no_errors	MAN2B2	HGNC
MED25	81857	genome.wustl.edu	37	19	50338793	50338793	+	Missense_Mutation	SNP	G	G	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	19	50338793	50338793	G	T	SNP	MED25	ENST00000312865	human	ensembl	70_37	+1	known	missense	c.1677	p.M559I	1.000	NULL	pfam_Mediator_Med25_VWA,pfam_Mediator_Med25,pfam_Mediator_Med25_SD1,pfam_Mediator_Med25_NR-box	-	no_errors	MED25	HGNC
MIR4485	100616263	genome.wustl.edu	37	MT	3221	3221	+	RNA	SNP	A	A	G			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	MT	3221	3221	A	G	SNP	MIR4485	ENST00000387347	human	ensembl	70_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MIR4485	HGNC
MTTP	4547	genome.wustl.edu	37	4	100530023	100530023	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	4	100530023	100530023	C	T	SNP	MTTP	ENST00000265517	human	ensembl	70_37	+1	known	missense	c.1658	p.S553F	1.000	pfam_Lipid_transpt_N,superfamily_Vitellinogen_superhlx,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	pfam_Lipid_transpt_N,superfamily_Vitellinogen_superhlx,superfamily_Lipid_transp_b-sht_shell,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	MTTP	HGNC
MUS81	80198	genome.wustl.edu	37	11	65629694	65629694	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	11	65629694	65629694	C	T	SNP	MUS81	ENST00000308110	human	ensembl	70_37	+1	known	missense	c.463	p.H155Y	0.006	NULL	pfam_ERCC4_domain,superfamily_Restrct_endonuc-II-like,superfamily_DNA-dir_DNA_pol_X_beta-like_N,smart_ERCC4_domain	-	no_errors	MUS81	HGNC
MYO15A	51168	genome.wustl.edu	37	17	18023395	18023395	+	Silent	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	17	18023395	18023395	C	T	SNP	MYO15A	ENST00000205890	human	ensembl	70_37	+1	known	silent	c.1281	p.H427	0.996	NULL	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_SH3_2,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_SH3_domain,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO15A	HGNC
NEXN	91624	genome.wustl.edu	37	1	78408216	78408216	+	Missense_Mutation	SNP	C	C	G			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	1	78408216	78408216	C	G	SNP	NEXN	ENST00000334785	human	ensembl	70_37	+1	known	missense	c.1730	p.T577S	1.000	NULL	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like	-	no_errors	NEXN	HGNC
NOVA1	4857	genome.wustl.edu	37	14	27066575	27066575	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	14	27066575	27066575	G	A	SNP	NOVA1	ENST00000539517	human	ensembl	70_37	-1	known	missense	c.68	p.P23L	1.000	NULL	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	NOVA1	HGNC
NUFIP1	26747	genome.wustl.edu	37	13	45515443	45515443	+	Missense_Mutation	SNP	G	G	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	13	45515443	45515443	G	T	SNP	NUFIP1	ENST00000379161	human	ensembl	70_37	-1	known	missense	c.1386	p.D462E	1.000	NULL	pfam_NUFIP1_cons_dom,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	NUFIP1	HGNC
NXF1	10482	genome.wustl.edu	37	11	62572855	62572855	+	RNA	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	11	62572855	62572855	C	T	SNP	NXF1	ENST00000526163	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	NXF1	HGNC
OFD1	8481	genome.wustl.edu	37	X	13778396	13778396	+	Nonsense_Mutation	SNP	C	C	G			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	X	13778396	13778396	C	G	SNP	OFD1	ENST00000340096	human	ensembl	70_37	+1	known	nonsense	c.1817	p.S606*	0.147	NULL	superfamily_Lipoprotein_6,smart_LisH_dimerisation,pfscan_LisH_dimerisation	-	no_errors	OFD1	HGNC
PAX9	5083	genome.wustl.edu	37	14	37135651	37135651	+	RNA	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	14	37135651	37135651	C	T	SNP	PAX9	ENST00000557107	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PAX9	HGNC
PCDH1	5097	genome.wustl.edu	37	5	141236899	141236899	+	Silent	SNP	G	G	A			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	5	141236899	141236899	G	A	SNP	PCDH1	ENST00000287008	human	ensembl	70_37	-1	known	silent	c.3237	p.L1079	0.089	NULL	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH1	HGNC
PCDHB8	56128	genome.wustl.edu	37	5	140558959	140558959	+	Silent	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	5	140558959	140558959	C	T	SNP	PCDHB8	ENST00000239444	human	ensembl	70_37	+1	known	silent	c.1344	p.N448	0.994	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB8	HGNC
PEAR1	375033	genome.wustl.edu	37	1	156879698	156879698	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	1	156879698	156879698	C	T	SNP	PEAR1	ENST00000292357	human	ensembl	70_37	+1	known	missense	c.1567	p.P523S	0.964	superfamily_Growth_fac_rcpt,smart_EGF_laminin	pfam_EGF_laminin,superfamily_Growth_fac_rcpt,smart_EG-like_dom,smart_EGF_laminin,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	PEAR1	HGNC
PIP5K1C	23396	genome.wustl.edu	37	19	3653299	3653299	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	19	3653299	3653299	G	A	SNP	PIP5K1C	ENST00000537021	human	ensembl	70_37	-1	known	missense	c.910	p.R304W	1.000	pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub	pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub	-	no_errors	PIP5K1C	HGNC
PLEKHG4	25894	genome.wustl.edu	37	16	67322304	67322304	+	Splice_Site	SNP	G	G	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	16	67322304	67322304	G	T	SNP	PLEKHG4	ENST00000360461	human	ensembl	70_37	+1	known	splice_site	c.3454+1	e19+1	1.000	-	-	-	no_errors	PLEKHG4	HGNC
PLG	5340	genome.wustl.edu	37	6	161134305	161134306	+	RNA	INS	-	-	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	6	161134305	161134306	-	T	INS	PLG	ENST00000462918	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.002:0.003	-	-	-	no_errors	PLG	HGNC
PRDM9	56979	genome.wustl.edu	37	5	23509156	23509156	+	Missense_Mutation	SNP	A	A	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	5	23509156	23509156	A	T	SNP	PRDM9	ENST00000296682	human	ensembl	70_37	+1	known	missense	c.14	p.K5M	0.000	NULL	pfam_Znf_C2H2,pfam_SSXRD_motif,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	PRDM9	HGNC
PSMB9	5698	genome.wustl.edu	37	6	32822041	32822041	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	6	32822041	32822041	C	T	SNP	PSMB9	ENST00000374859	human	ensembl	70_37	+1	known	missense	c.35	p.P12L	0.004	NULL	pfam_Proteasome_sua/b,prints_Pept_T1A_subB	-	no_errors	PSMB9	HGNC
PSTPIP1	9051	genome.wustl.edu	37	15	77320166	77320166	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	15	77320166	77320166	C	T	SNP	PSTPIP1	ENST00000559750	human	ensembl	70_37	+1	known	missense	c.380	p.S127L	0.289	NULL	pfam_FCH,superfamily_Prismane-like,smart_FCH,pfscan_FCH	-	no_errors	PSTPIP1	HGNC
PTPN13	5783	genome.wustl.edu	37	4	87653625	87653625	+	Missense_Mutation	SNP	C	C	G			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	4	87653625	87653625	C	G	SNP	PTPN13	ENST00000436978	human	ensembl	70_37	+1	known	missense	c.1681	p.L561V	1.000	pirsf_Tyr_Pase_non-rcpt_typ-13	pirsf_Tyr_Pase_non-rcpt_typ-13,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_PDZ,pfam_FERM_central,pfam_FERM_PH-like_C,pfam_FERM_N,superfamily_FERM_central,superfamily_PDZ,superfamily_PAZ,smart_KIND,smart_Band_41_domain,smart_PDZ,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam,pfscan_FERM_domain,pfscan_PDZ,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN13	HGNC
RABIF	5877	genome.wustl.edu	37	1	202858203	202858203	+	Silent	SNP	G	G	A			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	1	202858203	202858203	G	A	SNP	RABIF	ENST00000367262	human	ensembl	70_37	-1	known	silent	c.24	p.S8	0.829	NULL	pfam_Mss4,superfamily_Mss4-like	-	no_errors	RABIF	HGNC
RBFOX1	54715	genome.wustl.edu	37	16	7760713	7760713	+	Missense_Mutation	SNP	A	A	G			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	16	7760713	7760713	A	G	SNP	RBFOX1	ENST00000311745	human	ensembl	70_37	+1	known	missense	c.1223	p.Y408C	1.000	NULL	pfam_Fox-1_C_dom,pfam_RRM_dom,smart_RRM_dom,pirsf_RNA-bd_Fox-1,pfscan_RRM_dom	-	no_errors	RBFOX1	HGNC
RSPH10B2	728194	genome.wustl.edu	37	7	6797357	6797357	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	7	6797357	6797357	C	T	SNP	RSPH10B2	ENST00000297186	human	ensembl	70_37	+1	known	missense	c.49	p.R17C	0.965	NULL	pfam_MORN,smart_MORN	-	no_errors	RSPH10B2	HGNC
RUFY2	55680	genome.wustl.edu	37	10	70103367	70103367	+	RNA	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	10	70103367	70103367	C	T	SNP	RUFY2	ENST00000466187	human	ensembl	70_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RUFY2	HGNC
SCN7A	6332	genome.wustl.edu	37	2	167328850	167328850	+	Silent	SNP	G	G	A			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	2	167328850	167328850	G	A	SNP	SCN7A	ENST00000409855	human	ensembl	70_37	-1	known	silent	c.549	p.L183	0.482	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN7A	HGNC
SH3BP2	6452	genome.wustl.edu	37	4	2831494	2831494	+	Silent	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	4	2831494	2831494	C	T	SNP	SH3BP2	ENST00000503393	human	ensembl	70_37	+1	known	silent	c.1032	p.T344	0.000	NULL	pfam_Pleckstrin_homology,pfam_SH2,smart_Pleckstrin_homology,smart_SH2,pfscan_Pleckstrin_homology,pfscan_SH2	-	no_errors	SH3BP2	HGNC
SLC1A2	6506	genome.wustl.edu	37	11	35323113	35323113	+	Missense_Mutation	SNP	G	G	C			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	11	35323113	35323113	G	C	SNP	SLC1A2	ENST00000278379	human	ensembl	70_37	-1	known	missense	c.810	p.F270L	1.000	pfam_Na-dicarboxylate_symporter	pfam_Na-dicarboxylate_symporter,prints_Na-dicarboxylate_symporter	-	no_errors	SLC1A2	HGNC
SLC25A16	8034	genome.wustl.edu	37	10	70243298	70243298	+	Missense_Mutation	SNP	C	C	A			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	10	70243298	70243298	C	A	SNP	SLC25A16	ENST00000265870	human	ensembl	70_37	-1	known	missense	c.890	p.R297L	0.997	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Graves_DC	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Graves_DC,prints_Mit_carrier	-	no_errors	SLC25A16	HGNC
SLC25A47	283600	genome.wustl.edu	37	14	100792566	100792566	+	Splice_Site	SNP	G	G	A			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	14	100792566	100792566	G	A	SNP	SLC25A47	ENST00000361529	human	ensembl	70_37	+1	known	splice_site	c.144+1	e3+1	1.000	-	-	-	no_errors	SLC25A47	HGNC
SLC35F3	148641	genome.wustl.edu	37	1	234444857	234444857	+	Nonsense_Mutation	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	1	234444857	234444857	C	T	SNP	SLC35F3	ENST00000366618	human	ensembl	70_37	+1	known	nonsense	c.619	p.R207*	1.000	NULL	pfam_DMT,pfam_DUF250,pfam_DUF914_euk	-	no_errors	SLC35F3	HGNC
SLC46A2	57864	genome.wustl.edu	37	9	115652031	115652031	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	9	115652031	115652031	C	T	SNP	SLC46A2	ENST00000374228	human	ensembl	70_37	-1	known	missense	c.931	p.E311K	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,prints_Tet-R_TetA/multi-R_MdtG	-	no_errors	SLC46A2	HGNC
SLC7A2	6542	genome.wustl.edu	37	8	17401053	17401053	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	8	17401053	17401053	G	A	SNP	SLC7A2	ENST00000004531	human	ensembl	70_37	+1	known	missense	c.325	p.V109M	0.960	pfam_AA-permease_dom,tigrfam_Cat_AA_permease	pfam_AA-permease_dom,tigrfam_Cat_AA_permease	-	no_errors	SLC7A2	HGNC
SMARCC2	6601	genome.wustl.edu	37	12	56558435	56558435	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	12	56558435	56558435	C	T	SNP	SMARCC2	ENST00000267064	human	ensembl	70_37	-1	known	missense	c.3220	p.A1074T	1.000	NULL	pfam_SWIRM,pfam_SANT/Myb,superfamily_Homeodomain-like,superfamily_BRCT_dom,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_SANT/Myb,pfscan_SWIRM,pfscan_Myb-like_dom	-	no_errors	SMARCC2	HGNC
SMO	6608	genome.wustl.edu	37	7	128845480	128845480	+	Silent	SNP	G	G	A			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	7	128845480	128845480	G	A	SNP	SMO	ENST00000249373	human	ensembl	70_37	+1	known	silent	c.777	p.S259	0.676	pfam_Frizzled,pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_Frizzled,pfam_Frizzled_dom,pfam_GPCR_2_secretin-like,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	SMO	HGNC
SOHLH2	54937	genome.wustl.edu	37	13	36747844	36747844	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	13	36747844	36747844	C	T	SNP	SOHLH2	ENST00000554962	human	ensembl	70_37	-1	known	missense	c.1216	p.D406N	0.587	NULL	pfam_HLH_dom,superfamily_HLH_dom,smart_HLH_dom,pfscan_HLH_dom	-	no_errors	SOHLH2	HGNC
SRCAP	10847	genome.wustl.edu	37	16	30736067	30736067	+	Silent	SNP	G	G	A			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	16	30736067	30736067	G	A	SNP	SRCAP	ENST00000262518	human	ensembl	70_37	+1	known	silent	c.5322	p.S1774	0.198	NULL	pfam_SNF2_N,pfam_HSA,pfam_Helicase_C,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,smart_AT_hook_DNA-bd_motif,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_AT_hook-like	-	no_errors	SRCAP	HGNC
SVIL	6840	genome.wustl.edu	37	10	29746346	29746347	+	RNA	INS	-	-	TGTT			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	10	29746346	29746347	-	TGTT	INS	SVIL	ENST00000497265	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.991:0.994	-	-	-	no_errors	SVIL	HGNC
SYNE1	23345	genome.wustl.edu	37	6	152470698	152470698	+	Nonsense_Mutation	SNP	C	C	A			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	6	152470698	152470698	C	A	SNP	SYNE1	ENST00000265368	human	ensembl	70_37	-1	known	nonsense	c.24556	p.E8186*	1.000	pfam_Spectrin_repeat,superfamily_ABC_transptrTM_dom_typ1,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC_transptrTM_dom_typ1,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC
TGIF2	60436	genome.wustl.edu	37	20	35220571	35220572	+	RNA	INS	-	-	A			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	20	35220571	35220572	-	A	INS	TGIF2	ENST00000558465	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	TGIF2	HGNC
THAP9	79725	genome.wustl.edu	37	4	83839270	83839270	+	Missense_Mutation	SNP	G	G	C			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	4	83839270	83839270	G	C	SNP	THAP9	ENST00000302236	human	ensembl	70_37	+1	known	missense	c.1905	p.Q635H	0.999	NULL	pfam_Znf_C2CH,smart_Znf_C2CH,pfscan_Znf_C2CH	-	no_errors	THAP9	HGNC
THSD7B	80731	genome.wustl.edu	37	2	137852675	137852675	+	Missense_Mutation	SNP	C	C	G			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	2	137852675	137852675	C	G	SNP	THSD7B	ENST00000272643	human	ensembl	70_37	+1	known	missense	c.1183	p.L395V	0.926	superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD7B	HGNC
TKTL2	84076	genome.wustl.edu	37	4	164393427	164393427	+	Missense_Mutation	SNP	G	G	A			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	4	164393427	164393427	G	A	SNP	TKTL2	ENST00000280605	human	ensembl	70_37	-1	known	missense	c.1460	p.P487L	0.008	NULL	pfam_Transketolase_N,pfam_Transketolase-like_Pyr-bd,pfam_Transketolase_C,pfam_DH_E1,superfamily_Transketo_C/Pyr-ferredox_oxred,smart_Transketolase-like_Pyr-bd	-	no_errors	TKTL2	HGNC
TMC5	79838	genome.wustl.edu	37	16	19451964	19451964	+	Silent	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	16	19451964	19451964	C	T	SNP	TMC5	ENST00000396229	human	ensembl	70_37	+1	known	silent	c.604	p.L202	0.000	NULL	pfam_TMC	-	no_errors	TMC5	HGNC
TPCN2	219931	genome.wustl.edu	37	11	68855399	68855399	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	11	68855399	68855399	C	T	SNP	TPCN2	ENST00000294309	human	ensembl	70_37	+1	known	missense	c.2237	p.P746L	0.987	NULL	pfam_Ion_trans_dom	-	no_errors	TPCN2	HGNC
TPSD1	23430	genome.wustl.edu	37	16	1306681	1306681	+	Missense_Mutation	SNP	A	A	C			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	16	1306681	1306681	A	C	SNP	TPSD1	ENST00000211076	human	ensembl	70_37	+1	known	missense	c.247	p.V83L	0.026	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6,prints_Peptidase_S1A	-	no_errors	TPSD1	HGNC
TUBA4B	80086	genome.wustl.edu	37	2	220118077	220118077	+	RNA	DEL	G	G	-			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	2	220118077	220118077	G	-	DEL	TUBA4B	ENST00000473885	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TUBA4B	HGNC
UBXN4	23190	genome.wustl.edu	37	2	136540402	136540402	+	Missense_Mutation	SNP	A	A	G			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	2	136540402	136540402	A	G	SNP	UBXN4	ENST00000272638	human	ensembl	70_37	+1	known	missense	c.1472	p.D491G	1.000	NULL	pfam_UBX,superfamily_Thioredoxin-like_fold,smart_UBX,pfscan_UBX	-	no_errors	UBXN4	HGNC
VCAN	1462	genome.wustl.edu	37	5	82876847	82876847	+	RNA	DEL	G	G	-			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	5	82876847	82876847	G	-	DEL	VCAN	ENST00000513016	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	VCAN	HGNC
VKORC1L1	154807	genome.wustl.edu	37	7	65419185	65419185	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	7	65419185	65419185	C	T	SNP	VKORC1L1	ENST00000434382	human	ensembl	70_37	+1	novel	missense	c.319	p.R107C	1.000	NULL	pfam_VKOR	-	no_errors	VKORC1L1	HGNC
ZNF526	116115	genome.wustl.edu	37	19	42729913	42729913	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	19	42729913	42729913	C	T	SNP	ZNF526	ENST00000301215	human	ensembl	70_37	+1	known	missense	c.1358	p.S453L	0.157	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF526	HGNC
ZNF672	79894	genome.wustl.edu	37	1	249142781	249142781	+	Silent	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	1	249142781	249142781	C	T	SNP	ZNF672	ENST00000306562	human	ensembl	70_37	+1	known	silent	c.1308	p.L436	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF672	HGNC
ZNF714	148206	genome.wustl.edu	37	19	21300204	21300204	+	Missense_Mutation	SNP	C	C	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	19	21300204	21300204	C	T	SNP	ZNF714	ENST00000596143	human	ensembl	70_37	+1	known	missense	c.734	p.T245I	0.001	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF714	HGNC
ZNF791	163049	genome.wustl.edu	37	19	12734618	12734619	+	Frame_Shift_Ins	INS	-	-	T			TCGA-JW-A5VI-01A-11D-A28B-09	TCGA-JW-A5VI-10A-01D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3fa0d743-1312-4aa6-967d-7ec81af780cd	4cf0c64a-057d-4e79-85f2-dffc58753ffd	19	12734618	12734619	-	T	INS	ZNF791	ENST00000343325	human	ensembl	70_37	+1	known	frame_shift_ins	c.108_109	p.K37fs	0.638:0.608	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF791	HGNC
