Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_alt_allele	validation_method	validation_status	validation_tumor_sample	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
M1AP	130951	broad.mit.edu	37	2	74842189	74842189	+	Missense_Mutation	SNP	C	C	G			TCGA-V4-A9ES-01A-11D-A39W-08	TCGA-V4-A9ES-10A-01D-A39Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	42a94c23-0879-4887-83c3-2294819819e0	6c8ff4cc-c3c1-4e83-b7fd-ad2577437ba3	g.chr2:74842189C>G	ENST00000290536.5	-	3	444	c.328G>C	c.(328-330)Gct>Cct	p.A110P	M1AP_ENST00000358434.2_5'UTR|M1AP_ENST00000409585.1_Missense_Mutation_p.A110P|M1AP_ENST00000536235.1_Missense_Mutation_p.A110P	NM_001281296.1|NM_138804.3	NP_001268225.1|NP_620159.2			meiosis 1 associated protein																		CGCAGAGAAGCACCTTGTGAT	0.502000													39	36					0	0	1	0	0
RP11-69H14.6	0	broad.mit.edu	37	15	22332570	22332570	+	RNA	SNP	T	T	C			TCGA-V4-A9ES-01A-11D-A39W-08	TCGA-V4-A9ES-10A-01D-A39Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	42a94c23-0879-4887-83c3-2294819819e0	6c8ff4cc-c3c1-4e83-b7fd-ad2577437ba3	g.chr15:22332570T>C	ENST00000558896.1	+	0	377																											CCCATGCTCATCTGCTCCAAT	0.398000													5	131					0	0	1	0	0
OR2D3	120775	broad.mit.edu	37	11	6943043	6943043	+	Missense_Mutation	SNP	G	G	A			TCGA-V4-A9ES-01A-11D-A39W-08	TCGA-V4-A9ES-10A-01D-A39Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	42a94c23-0879-4887-83c3-2294819819e0	6c8ff4cc-c3c1-4e83-b7fd-ad2577437ba3	g.chr11:6943043G>A	ENST00000317834.3	+	1	839	c.811G>A	c.(811-813)Gga>Aga	p.G271R		NM_001004684.1	NP_001004684.1	Q8NGH3	OR2D3_HUMAN	olfactory receptor, family 2, subfamily D, member 3	271					sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			breast(1)|endometrium(2)|large_intestine(7)|lung(12)|prostate(3)|skin(1)|stomach(1)	27		Medulloblastoma(188;0.0523)|all_neural(188;0.236)		Epithelial(150;4.78e-08)|BRCA - Breast invasive adenocarcinoma(625;0.129)		CTATGGGTCAGGAATATTCAC	0.443000													44	43					0	0	1	0	0
DEPDC5	9681	broad.mit.edu	37	22	32215199	32215199	+	Missense_Mutation	SNP	A	A	G			TCGA-V4-A9ES-01A-11D-A39W-08	TCGA-V4-A9ES-10A-01D-A39Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	42a94c23-0879-4887-83c3-2294819819e0	6c8ff4cc-c3c1-4e83-b7fd-ad2577437ba3	g.chr22:32215199A>G	ENST00000400246.1	+	22	2000	c.1858A>G	c.(1858-1860)Act>Gct	p.T620A	DEPDC5_ENST00000536766.1_Missense_Mutation_p.T592A|DEPDC5_ENST00000382105.2_Missense_Mutation_p.T620A|DEPDC5_ENST00000266091.3_Missense_Mutation_p.T620A|DEPDC5_ENST00000400249.2_Missense_Mutation_p.T620A|DEPDC5_ENST00000382111.2_Missense_Mutation_p.T620A|DEPDC5_ENST00000400248.2_Missense_Mutation_p.T620A|DEPDC5_ENST00000382112.3_Missense_Mutation_p.T620A|DEPDC5_ENST00000535622.1_Missense_Mutation_p.T620A			O75140	DEPD5_HUMAN	DEP domain containing 5	620					intracellular signal transduction					breast(1)|central_nervous_system(5)|endometrium(7)|haematopoietic_and_lymphoid_tissue(1)|kidney(3)|large_intestine(8)|lung(24)|ovary(5)|pancreas(2)|prostate(3)|stomach(1)|upper_aerodigestive_tract(2)|urinary_tract(1)	63						CTGGATGCACACTTTTCCTGT	0.557000													34	33					0	0	1	0	0
NBPF1	55672	broad.mit.edu	37	1	16918653	16918653	+	Splice_Site	SNP	C	C	T			TCGA-V4-A9ES-01A-11D-A39W-08	TCGA-V4-A9ES-10A-01D-A39Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	42a94c23-0879-4887-83c3-2294819819e0	6c8ff4cc-c3c1-4e83-b7fd-ad2577437ba3	g.chr1:16918653C>T	ENST00000430580.2	-	6	853		c.e6+1			NM_017940.3	NP_060410.2	Q3BBV0	NBPF1_HUMAN	neuroblastoma breakpoint family, member 1							cytoplasm									UCEC - Uterine corpus endometrioid carcinoma (279;0.00459)|BRCA - Breast invasive adenocarcinoma(304;7.52e-06)|COAD - Colon adenocarcinoma(227;1.05e-05)|Kidney(64;0.00016)|KIRC - Kidney renal clear cell carcinoma(64;0.00258)|STAD - Stomach adenocarcinoma(196;0.00644)|READ - Rectum adenocarcinoma(331;0.0649)|Lung(427;0.179)		TCTTAACTTACTGTTGTGAAA	0.418000													6	24					0	0	1	0	0
CDKL5	6792	broad.mit.edu	37	X	18606258	18606258	+	Missense_Mutation	SNP	C	C	A			TCGA-V4-A9ES-01A-11D-A39W-08	TCGA-V4-A9ES-10A-01D-A39Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	42a94c23-0879-4887-83c3-2294819819e0	6c8ff4cc-c3c1-4e83-b7fd-ad2577437ba3	g.chrX:18606258C>A	ENST00000379989.3	+	10	1024	c.739C>A	c.(739-741)Ctc>Atc	p.L247I	CDKL5_ENST00000379996.3_Missense_Mutation_p.L247I	NM_001037343.1	NP_001032420.1	O76039	CDKL5_HUMAN	cyclin-dependent kinase-like 5	247	Protein kinase.				neuron migration|positive regulation of axon extension|positive regulation of dendrite morphogenesis|positive regulation of Rac GTPase activity|protein autophosphorylation	dendrite cytoplasm|dendritic growth cone|nucleus	ATP binding|cyclin-dependent protein kinase activity|Rac GTPase binding			NS(2)|breast(1)|central_nervous_system(1)|endometrium(4)|haematopoietic_and_lymphoid_tissue(1)|kidney(2)|large_intestine(11)|lung(12)|ovary(4)|skin(5)|stomach(1)	44	Hepatocellular(33;0.183)					CTTCCATGGGCTCCGGGTAAG	0.398000													4	181					1	1	1	1	0
FGF7	2252	broad.mit.edu	37	15	49776572	49776572	+	Silent	SNP	A	A	C			TCGA-V4-A9ES-01A-11D-A39W-08	TCGA-V4-A9ES-10A-01D-A39Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	42a94c23-0879-4887-83c3-2294819819e0	6c8ff4cc-c3c1-4e83-b7fd-ad2577437ba3	g.chr15:49776572A>C	ENST00000267843.4	+	4	1067	c.456A>C	c.(454-456)gcA>gcC	p.A152A	FGF7_ENST00000560704.1_3'UTR|FAM227B_ENST00000561064.1_Intron|FAM227B_ENST00000299338.6_Intron	NM_002009.3	NP_002000.1	P21781	FGF7_HUMAN	fibroblast growth factor 7	152					actin cytoskeleton reorganization|fibroblast growth factor receptor signaling pathway|insulin receptor signaling pathway|mesenchymal cell proliferation|positive regulation of cell division|positive regulation of epithelial cell proliferation involved in lung morphogenesis|positive regulation of keratinocyte migration|positive regulation of keratinocyte proliferation|positive regulation of peptidyl-tyrosine phosphorylation|protein localization at cell surface|secretion by lung epithelial cell involved in lung growth		chemoattractant activity|growth factor activity	p.A152A(1)		kidney(1)|large_intestine(1)|lung(2)|prostate(1)	5		all_lung(180;0.00391)		all cancers(107;3.61e-08)|GBM - Glioblastoma multiforme(94;4.06e-05)	Palifermin(DB00039)	ACACATATGCATCAGCTAAAT	0.338000													3	50					0	0	1	0	0
CAP2	10486	broad.mit.edu	37	6	17541321	17541321	+	Missense_Mutation	SNP	C	C	A			TCGA-V4-A9ES-01A-11D-A39W-08	TCGA-V4-A9ES-10A-01D-A39Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	42a94c23-0879-4887-83c3-2294819819e0	6c8ff4cc-c3c1-4e83-b7fd-ad2577437ba3	g.chr6:17541321C>A	ENST00000229922.2	+	9	1476	c.944C>A	c.(943-945)tCt>tAt	p.S315Y	CAP2_ENST00000465994.1_Missense_Mutation_p.S251Y|CAP2_ENST00000489374.1_Missense_Mutation_p.S203Y|CAP2_ENST00000378990.2_Missense_Mutation_p.S289Y|CAP2_ENST00000493172.1_Intron	NM_006366.2	NP_006357.1	P40123	CAP2_HUMAN	CAP, adenylate cyclase-associated protein, 2 (yeast)	315					activation of adenylate cyclase activity|axon guidance|cytoskeleton organization|establishment or maintenance of cell polarity|signal transduction	plasma membrane	actin binding			breast(3)|endometrium(4)|kidney(1)|large_intestine(6)|lung(7)|ovary(1)|skin(4)|urinary_tract(1)	27	Breast(50;0.0333)|Ovarian(93;0.0386)	all_hematologic(90;0.0466)	all cancers(50;0.194)|Epithelial(50;0.227)			TCTCCTAAATCTTATCCTTCT	0.453000													28	53					7.01153e-11	7.74959e-11	1	1	0
TRPM6	140803	broad.mit.edu	37	9	77390841	77390841	+	Missense_Mutation	SNP	G	G	C			TCGA-V4-A9ES-01A-11D-A39W-08	TCGA-V4-A9ES-10A-01D-A39Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	42a94c23-0879-4887-83c3-2294819819e0	6c8ff4cc-c3c1-4e83-b7fd-ad2577437ba3	g.chr9:77390841G>C	ENST00000451710.3	-	24	3598	c.3361C>G	c.(3361-3363)Cat>Gat	p.H1121D	TRPM6_ENST00000361255.3_Missense_Mutation_p.H1116D|TRPM6_ENST00000376871.3_Intron|TRPM6_ENST00000376864.4_Missense_Mutation_p.H1121D|TRPM6_ENST00000376872.3_Intron|TRPM6_ENST00000449912.2_Missense_Mutation_p.H1116D|TRPM6_ENST00000360774.1_Missense_Mutation_p.H1121D			Q9BX84	TRPM6_HUMAN	transient receptor potential cation channel, subfamily M, member 6	1121					response to toxin	integral to membrane	ATP binding|calcium channel activity|metal ion binding|protein binding|protein serine/threonine kinase activity			NS(2)|breast(1)|central_nervous_system(1)|cervix(1)|endometrium(13)|haematopoietic_and_lymphoid_tissue(1)|kidney(4)|large_intestine(22)|liver(1)|lung(53)|ovary(1)|prostate(7)|skin(12)|stomach(4)|upper_aerodigestive_tract(2)|urinary_tract(1)	126						GGAGCTCGATGACAGCACAGG	0.547000													22	67					0	0	1	0	0
ZNF560	147741	broad.mit.edu	37	19	9578390	9578390	+	Missense_Mutation	SNP	T	T	A			TCGA-V4-A9ES-01A-11D-A39W-08	TCGA-V4-A9ES-10A-01D-A39Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	42a94c23-0879-4887-83c3-2294819819e0	6c8ff4cc-c3c1-4e83-b7fd-ad2577437ba3	g.chr19:9578390T>A	ENST00000301480.4	-	10	1446	c.1233A>T	c.(1231-1233)aaA>aaT	p.K411N		NM_152476.2	NP_689689.2	Q96MR9	ZN560_HUMAN	zinc finger protein 560	411					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding			NS(1)|breast(3)|endometrium(3)|kidney(2)|large_intestine(16)|liver(2)|lung(24)|ovary(2)|pancreas(1)|prostate(1)|skin(5)|stomach(1)|upper_aerodigestive_tract(4)	65						TACCAAAGGCTTTACCACATT	0.448000													15	15					0	0	1	0	0
GNAQ	2776	broad.mit.edu	37	9	80412493	80412493	+	Missense_Mutation	SNP	C	C	T			TCGA-V4-A9ES-01A-11D-A39W-08	TCGA-V4-A9ES-10A-01D-A39Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	42a94c23-0879-4887-83c3-2294819819e0	6c8ff4cc-c3c1-4e83-b7fd-ad2577437ba3	g.chr9:80412493C>T	ENST00000286548.4	-	4	770	c.548G>A	c.(547-549)cGa>cAa	p.R183Q	GNAQ_ENST00000397476.3_5'UTR	NM_002072.3	NP_002063.2	P50148	GNAQ_HUMAN	guanine nucleotide binding protein (G protein), q polypeptide	183					activation of adenylate cyclase activity by G-protein signaling pathway|activation of phospholipase C activity by dopamine receptor signaling pathway|glutamate signaling pathway|negative regulation of protein kinase activity|platelet activation|protein ADP-ribosylation|protein stabilization|regulation of action potential|regulation of catenin import into nucleus	cytoplasm|heterotrimeric G-protein complex	G-protein beta/gamma-subunit complex binding|G-protein-coupled receptor binding|GTP binding|GTPase activator activity|GTPase activity|signal transducer activity	p.R183Q(9)		NS(1)|endometrium(3)|eye(229)|kidney(1)|large_intestine(4)|lung(6)|meninges(11)|ovary(1)|prostate(1)|skin(44)|upper_aerodigestive_tract(1)	302						GGTGGGGACTCGAACTCTAAG	0.468000			Mis		uveal melanoma								55	40					0	0	1	0	0
BCOR	54880	broad.mit.edu	37	X	39932447	39932447	+	Missense_Mutation	SNP	C	C	G			TCGA-V4-A9ES-01A-11D-A39W-08	TCGA-V4-A9ES-10A-01D-A39Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	42a94c23-0879-4887-83c3-2294819819e0	6c8ff4cc-c3c1-4e83-b7fd-ad2577437ba3	g.chrX:39932447C>G	ENST00000342274.4	-	4	2514	c.2152G>C	c.(2152-2154)Gat>Cat	p.D718H	BCOR_ENST00000397354.3_Missense_Mutation_p.D718H|BCOR_ENST00000378455.4_Missense_Mutation_p.D718H|BCOR_ENST00000378444.4_Missense_Mutation_p.D718H	NM_001123383.1	NP_001116855.1	Q6W2J9	BCOR_HUMAN	BCL6 corepressor	718					heart development|histone H2A monoubiquitination|negative regulation of bone mineralization|negative regulation of histone H3-K36 methylation|negative regulation of histone H3-K4 methylation|negative regulation of tooth mineralization|negative regulation of transcription from RNA polymerase II promoter|odontogenesis|palate development|specification of axis polarity|transcription, DNA-dependent	nucleus	heat shock protein binding|histone deacetylase binding|transcription corepressor activity|transcription factor binding|transcription regulatory region DNA binding			breast(4)|central_nervous_system(11)|cervix(1)|endometrium(24)|eye(6)|haematopoietic_and_lymphoid_tissue(33)|kidney(2)|large_intestine(11)|lung(22)|ovary(2)|pancreas(1)|prostate(2)|skin(2)|upper_aerodigestive_tract(3)|urinary_tract(2)	126						CCCAGGGCATCTTGGTAGGTC	0.557000			"""F, N, S, T"""	RARA	"""retinoblastoma, AML, APL(translocation)"""		oculo-facio-cardio-dental genetic						29	25					0	0	1	0	0
CBX5	23468	broad.mit.edu	37	12	54651299	54651299	+	Splice_Site	SNP	C	C	T			TCGA-V4-A9ES-01A-11D-A39W-08	TCGA-V4-A9ES-10A-01D-A39Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	42a94c23-0879-4887-83c3-2294819819e0	6c8ff4cc-c3c1-4e83-b7fd-ad2577437ba3	g.chr12:54651299C>T	ENST00000209875.4	-	2	272	c.136G>A	c.(136-138)Gag>Aag	p.E46K	CBX5_ENST00000550411.1_Splice_Site_p.E46K|CBX5_ENST00000439541.2_Splice_Site_p.E46K	NM_012117.2	NP_036249.1	P45973	CBX5_HUMAN	chromobox homolog 5	46	Chromo 1.				blood coagulation|interspecies interaction between organisms|negative regulation of transcription, DNA-dependent	cytoplasm|histone deacetylase complex|histone methyltransferase complex|nuclear centromeric heterochromatin|nuclear envelope|nucleolus|transcriptional repressor complex	methylated histone residue binding|protein binding, bridging|repressing transcription factor binding			endometrium(1)|kidney(1)|large_intestine(2)|lung(1)|prostate(1)|skin(2)	8						GGAACTTACTCAGAAAAGCCT	0.443000													25	40					0	0	1	0	0
SLC6A10P	0	broad.mit.edu	37	16	32890622	32890622	+	RNA	SNP	T	T	G			TCGA-V4-A9ES-01A-11D-A39W-08	TCGA-V4-A9ES-10A-01D-A39Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	42a94c23-0879-4887-83c3-2294819819e0	6c8ff4cc-c3c1-4e83-b7fd-ad2577437ba3	g.chr16:32890622T>G	ENST00000330048.5	-	0	3176					NR_003083.2																						CGTTGGTGTTTTTGTAGACCA	0.617000													4	32					0	0	1	0	0
SF3B1	23451	broad.mit.edu	37	2	198267483	198267483	+	Missense_Mutation	SNP	C	C	T			TCGA-V4-A9ES-01A-11D-A39W-08	TCGA-V4-A9ES-10A-01D-A39Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	42a94c23-0879-4887-83c3-2294819819e0	6c8ff4cc-c3c1-4e83-b7fd-ad2577437ba3	g.chr2:198267483C>T	ENST00000335508.6	-	14	1965	c.1874G>A	c.(1873-1875)cGt>cAt	p.R625H		NM_012433.2	NP_036565.2	O75533	SF3B1_HUMAN	splicing factor 3b, subunit 1, 155kDa						nuclear mRNA splicing, via spliceosome	catalytic step 2 spliceosome|nuclear speck|U12-type spliceosomal complex	protein binding	p.R625L(9)|p.R625P(2)|p.R625H(1)		NS(35)|breast(10)|central_nervous_system(3)|endometrium(8)|haematopoietic_and_lymphoid_tissue(524)|kidney(4)|large_intestine(10)|lung(19)|ovary(1)|pancreas(4)|prostate(6)|salivary_gland(1)|skin(4)|testis(1)|upper_aerodigestive_tract(1)|urinary_tract(2)	633			OV - Ovarian serous cystadenocarcinoma(117;0.246)			TGTTGTGTTACGGACATACTC	0.438000			Mis		myelodysplastic syndrome								14	27					0	0	1	0	0
TTLL13	440307	broad.mit.edu	37	15	90799479	90799479	+	Missense_Mutation	SNP	C	C	T			TCGA-V4-A9ES-01A-11D-A39W-08	TCGA-V4-A9ES-10A-01D-A39Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	42a94c23-0879-4887-83c3-2294819819e0	6c8ff4cc-c3c1-4e83-b7fd-ad2577437ba3	g.chr15:90799479C>T	ENST00000438251.1	+	6	945	c.655C>T	c.(655-657)Cgg>Tgg	p.R219W	RP11-697E2.6_ENST00000561573.1_Intron|TTLL13_ENST00000339615.5_Missense_Mutation_p.R219W			A6NNM8	TTL13_HUMAN	tubulin tyrosine ligase-like family, member 13	219	TTL.				protein modification process		ATP binding|tubulin-tyrosine ligase activity			NS(1)|breast(2)|endometrium(4)|kidney(1)|large_intestine(4)|lung(3)|prostate(1)	16	Melanoma(11;0.00551)|Lung NSC(78;0.0178)|all_lung(78;0.0378)		KIRC - Kidney renal clear cell carcinoma(17;0.0286)|BRCA - Breast invasive adenocarcinoma(143;0.0323)|Kidney(142;0.0514)			CCGAAATCCCCGGGAGATCAA	0.557000													28	0					0	0	1	0	0
SPOCD1	90853	broad.mit.edu	37	1	32258997	32258999	+	In_Frame_Del	DEL	GCA	GCA	-			TCGA-V4-A9ES-01A-11D-A39W-08	TCGA-V4-A9ES-10A-01D-A39Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	42a94c23-0879-4887-83c3-2294819819e0	6c8ff4cc-c3c1-4e83-b7fd-ad2577437ba3	g.chr1:32258997_32258999delGCA	ENST00000360482.2	-	13	2694_2696	c.2565_2567delTGC	c.(2563-2568)gctgca>gca	p.855_856AA>A	SPOCD1_ENST00000533231.1_In_Frame_Del_p.855_856AA>A|SPOCD1_ENST00000257100.3_In_Frame_Del_p.348_349AA>A|SPOCD1_ENST00000373648.2_3'UTR	NM_144569.4	NP_653170.3	Q6ZMY3	SPOC1_HUMAN	SPOC domain containing 1	855					transcription, DNA-dependent					NS(1)|breast(1)|central_nervous_system(1)|endometrium(1)|haematopoietic_and_lymphoid_tissue(1)|kidney(3)|large_intestine(8)|liver(1)|lung(7)|ovary(6)|prostate(1)|skin(3)|stomach(1)|urinary_tract(2)	37		Myeloproliferative disorder(586;0.0393)|all_neural(195;0.186)|Ovarian(437;0.199)		STAD - Stomach adenocarcinoma(196;0.18)		CTTTGTGGGTGCAGCAGGCACAT	0.635													2	4	---	---	---	---					
TRDN	10345	broad.mit.edu	37	6	123786032	123786033	+	Frame_Shift_Ins	INS	-	-	A			TCGA-V4-A9ES-01A-11D-A39W-08	TCGA-V4-A9ES-10A-01D-A39Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	42a94c23-0879-4887-83c3-2294819819e0	6c8ff4cc-c3c1-4e83-b7fd-ad2577437ba3	g.chr6:123786032_123786033insA	ENST00000546248.1	-	9	1022_1023	c.889_890insT	c.(889-891)tctfs	p.S297fs	RP11-532N4.2_ENST00000587106.2_RNA|RP11-532N4.2_ENST00000427828.1_RNA|RP11-532N4.2_ENST00000418467.2_RNA|RP11-532N4.2_ENST00000589182.1_RNA|RP11-532N4.2_ENST00000434768.1_RNA|TRDN_ENST00000398178.3_Intron|TRDN_ENST00000334268.4_Intron	NM_001256020.1	NP_001242949.1	Q13061	TRDN_HUMAN	triadin	0					muscle contraction	integral to membrane|plasma membrane|sarcoplasmic reticulum membrane	receptor binding			NS(1)|endometrium(1)|kidney(1)|large_intestine(8)|liver(1)|lung(22)|ovary(2)|skin(1)|stomach(2)|upper_aerodigestive_tract(2)	41				GBM - Glioblastoma multiforme(226;0.184)		AGATCTTTAAGAAAAAAAAAAG	0.386													4	7	---	---	---	---					
EVPLL	645027	broad.mit.edu	37	17	18286814	18286814	+	Frame_Shift_Del	DEL	G	G	-			TCGA-V4-A9ES-01A-11D-A39W-08	TCGA-V4-A9ES-10A-01D-A39Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	42a94c23-0879-4887-83c3-2294819819e0	6c8ff4cc-c3c1-4e83-b7fd-ad2577437ba3	g.chr17:18286814delG	ENST00000399134.4	+	9	1147	c.789delG	c.(787-789)cagfs	p.Q263fs	RP1-37N7.1_ENST00000579352.1_RNA	NM_001145127.1	NP_001138599.1	A8MZ36	EVPLL_HUMAN	envoplakin-like	263										NS(1)|endometrium(1)|large_intestine(1)|lung(2)	5						AGGCCCACCAGGAGGCCCTGA	0.692													2	4	---	---	---	---					
NRK	203447	broad.mit.edu	37	X	105199570	105199570	+	Frame_Shift_Del	DEL	T	T	-			TCGA-V4-A9ES-01A-11D-A39W-08	TCGA-V4-A9ES-10A-01D-A39Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	42a94c23-0879-4887-83c3-2294819819e0	6c8ff4cc-c3c1-4e83-b7fd-ad2577437ba3	g.chrX:105199570delT	ENST00000428173.2	+	29	5033	c.4730delT	c.(4729-4731)ctcfs	p.L1577fs	NRK_ENST00000540278.1_Frame_Shift_Del_p.L157fs|NRK_ENST00000243300.9_Frame_Shift_Del_p.L1576fs			Q7Z2Y5	NRK_HUMAN	Nik related kinase	1576							ATP binding|protein serine/threonine kinase activity|small GTPase regulator activity			breast(8)|central_nervous_system(1)|endometrium(9)|haematopoietic_and_lymphoid_tissue(2)|large_intestine(14)|lung(36)|ovary(3)|prostate(1)|skin(2)	76						CTTGAAGAGCTCCAAAGCAAT	0.373										HNSCC(51;0.14)			2	4	---	---	---	---					
