Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source
ABL1	25	genome.wustl.edu	37	9	133759698	133759698	+	Missense_Mutation	SNP	G	G	A			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	9	133759698	133759698	G	A	SNP	ABL1	ENST00000372348	human	ensembl	70_37	+1	known	missense	c.2078	p.R693Q	1.000	NULL	pfam_F-actin_binding,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_F-actin_binding,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	ABL1	HGNC
AKR1E2	83592	genome.wustl.edu	37	10	4877913	4877913	+	Missense_Mutation	SNP	G	G	T			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	10	4877913	4877913	G	T	SNP	AKR1E2	ENST00000298375	human	ensembl	70_37	+1	known	missense	c.371	p.C124F	0.000	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	-	no_errors	AKR1E2	HGNC
ALOXE3	59344	genome.wustl.edu	37	17	8021319	8021319	+	Missense_Mutation	SNP	A	A	G			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	17	8021319	8021319	A	G	SNP	ALOXE3	ENST00000318227	human	ensembl	70_37	-1	known	missense	c.386	p.L129P	0.000	superfamily_Lipase_LipOase	pfam_LipOase_C,pfam_LipOase_LH2,superfamily_LipOase_C,superfamily_Lipase_LipOase,smart_LipOase_LH2,pfscan_LipOase_LH2,prints_LipOase_C	-	no_errors	ALOXE3	HGNC
AMOTL1	154810	genome.wustl.edu	37	11	94587123	94587123	+	Missense_Mutation	SNP	A	A	G			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	11	94587123	94587123	A	G	SNP	AMOTL1	ENST00000433060	human	ensembl	70_37	+1	known	missense	c.1820	p.E607G	1.000	pfam_Angiomotin_C,prints_Angiomotin	pfam_Angiomotin_C,prints_Angiomotin	-	no_errors	AMOTL1	HGNC
ANO4	121601	genome.wustl.edu	37	12	101493406	101493406	+	Missense_Mutation	SNP	C	C	A			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	12	101493406	101493406	C	A	SNP	ANO4	ENST00000392977	human	ensembl	70_37	+1	known	missense	c.2057	p.P686H	0.084	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO4	HGNC
ANO7	50636	genome.wustl.edu	37	2	242149012	242149012	+	Missense_Mutation	SNP	C	C	T			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	2	242149012	242149012	C	T	SNP	ANO7	ENST00000274979	human	ensembl	70_37	+1	known	missense	c.1483	p.R495C	0.017	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO7	HGNC
ARFGEF2	10564	genome.wustl.edu	37	20	47591380	47591380	+	Silent	SNP	G	G	T			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	20	47591380	47591380	G	T	SNP	ARFGEF2	ENST00000371917	human	ensembl	70_37	+1	known	silent	c.1743	p.L581	1.000	superfamily_ARM-type_fold	pfam_Sec7,pfam_DUF1981_SEC7_assoc,superfamily_Sec7,superfamily_ARM-type_fold,smart_Sec7,pfscan_Sec7	-	no_errors	ARFGEF2	HGNC
ARMC9	80210	genome.wustl.edu	37	2	232234743	232234743	+	RNA	SNP	A	A	G			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	2	232234743	232234743	A	G	SNP	ARMC9	ENST00000483477	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.652	-	-	-	no_errors	ARMC9	HGNC
ASTN1	460	genome.wustl.edu	37	1	176857336	176857336	+	Missense_Mutation	SNP	A	A	G			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	1	176857336	176857336	A	G	SNP	ASTN1	ENST00000367654	human	ensembl	70_37	-1	known	missense	c.2969	p.L990S	1.000	smart_MACPF	superfamily_Fibronectin_type3,smart_EG-like_dom,smart_MACPF,pfscan_Fibronectin_type3	-	no_errors	ASTN1	HGNC
ATF4P4	100127952	genome.wustl.edu	37	11	113660609	113660609	+	RNA	SNP	G	G	C			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	11	113660609	113660609	G	C	SNP	ATF4P4	ENST00000393544	human	ensembl	70_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ATF4P4	HGNC
C6orf70	55780	genome.wustl.edu	37	6	170162585	170162585	+	Silent	SNP	T	T	C			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	6	170162585	170162585	T	C	SNP	C6orf70	ENST00000366773	human	ensembl	70_37	+1	known	silent	c.918	p.F306	0.741	NULL	NULL	-	no_errors	C6orf70	HGNC
CAPN14	440854	genome.wustl.edu	37	2	31423333	31423333	+	Missense_Mutation	SNP	C	C	A			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	2	31423333	31423333	C	A	SNP	CAPN14	ENST00000444918	human	ensembl	70_37	-1	known	missense	c.710	p.C237F	1.000	pfam_Peptidase_C2_calpain_cat,smart_Peptidase_C2_calpain_cat,pfscan_Peptidase_C2_calpain_cat	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,pfscan_EF_HAND_2,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN14	HGNC
CDCP1	64866	genome.wustl.edu	37	3	45132717	45132717	+	Silent	SNP	G	G	A			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	3	45132717	45132717	G	A	SNP	CDCP1	ENST00000296129	human	ensembl	70_37	-1	known	silent	c.1941	p.S647	0.000	NULL	superfamily_CUB	-	no_errors	CDCP1	HGNC
CDCP1	64866	genome.wustl.edu	37	3	45132718	45132718	+	Missense_Mutation	SNP	C	C	G			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	3	45132718	45132718	C	G	SNP	CDCP1	ENST00000296129	human	ensembl	70_37	-1	known	missense	c.1940	p.S647T	0.003	NULL	superfamily_CUB	-	no_errors	CDCP1	HGNC
CDK10	8558	genome.wustl.edu	37	16	89757893	89757893	+	Missense_Mutation	SNP	G	G	A			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	16	89757893	89757893	G	A	SNP	CDK10	ENST00000353379	human	ensembl	70_37	+1	known	missense	c.275	p.R92H	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	CDK10	HGNC
CHGB	1114	genome.wustl.edu	37	20	5904601	5904601	+	Missense_Mutation	SNP	T	T	C			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	20	5904601	5904601	T	C	SNP	CHGB	ENST00000378961	human	ensembl	70_37	+1	known	missense	c.1811	p.V604A	1.000	pfam_Granin	pfam_Granin,prints_Chromogranin_AB	-	no_errors	CHGB	HGNC
COL4A6	1288	genome.wustl.edu	37	X	107418434	107418434	+	Missense_Mutation	SNP	T	T	C			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	X	107418434	107418434	T	C	SNP	COL4A6	ENST00000372216	human	ensembl	70_37	-1	known	missense	c.2845	p.N949D	0.003	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A6	HGNC
DENND4A	10260	genome.wustl.edu	37	15	65994218	65994218	+	Missense_Mutation	SNP	C	C	T			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	15	65994218	65994218	C	T	SNP	DENND4A	ENST00000443035	human	ensembl	70_37	-1	known	missense	c.2441	p.R814H	1.000	tigrfam_Pentatricopeptide_repeat	pfam_DENN_dom,pfam_dDENN_dom,pfam_uDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,tigrfam_Pentatricopeptide_repeat	-	no_errors	DENND4A	HGNC
DMXL2	23312	genome.wustl.edu	37	15	51748511	51748511	+	Missense_Mutation	SNP	T	T	C			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	15	51748511	51748511	T	C	SNP	DMXL2	ENST00000543779	human	ensembl	70_37	-1	known	missense	c.8330	p.Q2777R	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_Rav1p_C,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DMXL2	HGNC
ENSG00000244612	0	genome.wustl.edu	37	15	74364978	74364978	+	RNA	SNP	G	G	A			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	15	74364978	74364978	G	A	SNP	ENSG00000244612	ENST00000479090	human	ensembl	70_37	-1	novel	rna	NULL	NULL	0.001	-	-	-	no_errors	Metazoa_SRP	RFAM
ENSG00000268802	0	genome.wustl.edu	37	19	54864241	54864241	+	RNA	SNP	T	T	A			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	19	54864241	54864241	T	A	SNP	ENSG00000268802	ENST00000596234	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTD-2587H19.1	Clone_based_vega_gene
ENSG00000269293	0	genome.wustl.edu	37	6	28104731	28104731	+	Missense_Mutation	SNP	G	G	C			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	6	28104731	28104731	G	C	SNP	ENSG00000269293	ENST00000600652	human	ensembl	70_37	-1	known	missense	c.136	p.L46V	0.004	NULL	NULL	-	no_errors	AL358933.1	Clone_based_ensembl_gene
ERBB4	2066	genome.wustl.edu	37	2	212530163	212530163	+	Missense_Mutation	SNP	C	C	T			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	2	212530163	212530163	C	T	SNP	ERBB4	ENST00000342788	human	ensembl	70_37	-1	known	missense	c.1756	p.G586S	1.000	superfamily_Growth_fac_rcpt,smart_Furin_repeat,pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_cat_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ERBB4	HGNC
FBXO18	84893	genome.wustl.edu	37	10	5957376	5957376	+	Silent	SNP	G	G	A			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	10	5957376	5957376	G	A	SNP	FBXO18	ENST00000379999	human	ensembl	70_37	+1	known	silent	c.1560	p.K520	1.000	NULL	pfam_UvrD-like_ATP-bd,pfam_F-box_dom_cyclin-like,superfamily_F-box_dom_cyclin-like,pfscan_F-box_dom_cyclin-like	-	no_errors	FBXO18	HGNC
FCRL1	115350	genome.wustl.edu	37	1	157768000	157768000	+	Silent	SNP	G	G	T			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	1	157768000	157768000	G	T	SNP	FCRL1	ENST00000368176	human	ensembl	70_37	-1	known	silent	c.1065	p.T355	0.000	NULL	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	FCRL1	HGNC
FER1L6	654463	genome.wustl.edu	37	8	125025691	125025691	+	Silent	SNP	G	G	A			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	8	125025691	125025691	G	A	SNP	FER1L6	ENST00000399018	human	ensembl	70_37	+1	known	silent	c.1842	p.V614	0.966	NULL	pfam_C2_Ca-dep,pfam_Ferlin_B-domain,pfam_FerIin-domain,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_ABC_transptrTM_dom_typ1,smart_C2_Ca-dep,pfscan_C2_membr_targeting	-	no_errors	FER1L6	HGNC
FLNC	2318	genome.wustl.edu	37	7	128486419	128486419	+	Silent	SNP	C	C	T			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	7	128486419	128486419	C	T	SNP	FLNC	ENST00000325888	human	ensembl	70_37	+1	known	silent	c.4029	p.G1343	0.517	superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNC	HGNC
FREM3	166752	genome.wustl.edu	37	4	144621367	144621367	+	Silent	SNP	C	C	A			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	4	144621367	144621367	C	A	SNP	FREM3	ENST00000329798	human	ensembl	70_37	-1	putative	silent	c.462	p.L154	1.000	NULL	pfam_Calx_beta,superfamily_Cadherin-like,smart_Calx_beta	-	no_errors	FREM3	HGNC
FRMPD2	143162	genome.wustl.edu	37	10	49392882	49392882	+	Missense_Mutation	SNP	G	G	A			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	10	49392882	49392882	G	A	SNP	FRMPD2	ENST00000374201	human	ensembl	70_37	-1	known	missense	c.2402	p.P801L	0.993	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,pfam_FERM_central,pfam_FERM_PH-like_C,pfam_FERM_N,superfamily_PDZ,superfamily_FERM_central,superfamily_Kinase-like_dom,smart_KIND,smart_Band_41_domain,smart_PDZ,pfscan_FERM_domain,pfscan_PDZ,prints_Band_41_fam	-	no_errors	FRMPD2	HGNC
FSIP2	401024	genome.wustl.edu	37	2	186668590	186668592	+	In_Frame_Del	DEL	AGT	AGT	-			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	AGT	AGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	2	186668590	186668592	AGT	-	DEL	FSIP2	ENST00000343098	human	ensembl	70_37	+1	known	in_frame_del	c.14824_14826	p.S4942in_frame_del	0.319:0.208:0.098	NULL	NULL	-	no_errors	FSIP2	HGNC
GDF5	8200	genome.wustl.edu	37	20	34025308	34025308	+	Missense_Mutation	SNP	G	G	A			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	20	34025308	34025308	G	A	SNP	GDF5	ENST00000374369	human	ensembl	70_37	-1	known	missense	c.401	p.P134L	0.267	NULL	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C	-	no_errors	GDF5	HGNC
GEMIN6	79833	genome.wustl.edu	37	2	39008896	39008896	+	Silent	SNP	C	C	T			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	2	39008896	39008896	C	T	SNP	GEMIN6	ENST00000281950	human	ensembl	70_37	+1	known	silent	c.366	p.D122	0.000	pfam_Gemin6	pfam_Gemin6	-	no_errors	GEMIN6	HGNC
GKAP1	80318	genome.wustl.edu	37	9	86421236	86421236	+	Missense_Mutation	SNP	T	T	C			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	9	86421236	86421236	T	C	SNP	GKAP1	ENST00000376371	human	ensembl	70_37	-1	known	missense	c.197	p.Q66R	1.000	NULL	NULL	-	no_errors	GKAP1	HGNC
GKAP1	80318	genome.wustl.edu	37	9	86421237	86421237	+	Missense_Mutation	SNP	G	G	T			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	9	86421237	86421237	G	T	SNP	GKAP1	ENST00000376371	human	ensembl	70_37	-1	known	missense	c.196	p.Q66K	1.000	NULL	NULL	-	no_errors	GKAP1	HGNC
GPR3	2827	genome.wustl.edu	37	1	27720959	27720959	+	Silent	SNP	C	C	T			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	1	27720959	27720959	C	T	SNP	GPR3	ENST00000374024	human	ensembl	70_37	+1	known	silent	c.657	p.I219	0.993	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPR_orph_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPR_orph_rcpt,prints_GPR3_rcpt,prints_GPCR_Rhodpsn	-	no_errors	GPR3	HGNC
GRIN2A	2903	genome.wustl.edu	37	16	9857475	9857475	+	Missense_Mutation	SNP	C	C	T			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	16	9857475	9857475	C	T	SNP	GRIN2A	ENST00000330684	human	ensembl	70_37	-1	known	missense	c.3926	p.R1309Q	1.000	pfam_NMDAR2_C	pfam_NMDAR2_C,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2A	HGNC
GSTA2	2939	genome.wustl.edu	37	6	52617759	52617759	+	Missense_Mutation	SNP	C	C	T			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	6	52617759	52617759	C	T	SNP	GSTA2	ENST00000493422	human	ensembl	70_37	-1	known	missense	c.307	p.G103S	0.037	pfam_GST_C,superfamily_Glutathione-S-Trfase_C-like	pfam_Glutathione_S-Trfase_N,pfam_GST_C,superfamily_Glutathione-S-Trfase_C-like,superfamily_Thioredoxin-like_fold,prints_GST_alpha	-	no_errors	GSTA2	HGNC
HBS1L	10767	genome.wustl.edu	37	6	135358772	135358772	+	Missense_Mutation	SNP	C	C	A			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	6	135358772	135358772	C	A	SNP	HBS1L	ENST00000367822	human	ensembl	70_37	-1	known	missense	c.823	p.D275Y	0.030	NULL	pfam_DUF1916	-	no_errors	HBS1L	HGNC
HDX	139324	genome.wustl.edu	37	X	83724332	83724332	+	Silent	SNP	T	T	C			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	X	83724332	83724332	T	C	SNP	HDX	ENST00000297977	human	ensembl	70_37	-1	known	silent	c.399	p.A133	0.946	NULL	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain	-	no_errors	HDX	HGNC
HMCN1	83872	genome.wustl.edu	37	1	186050401	186050401	+	Missense_Mutation	SNP	A	A	G			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	1	186050401	186050401	A	G	SNP	HMCN1	ENST00000271588	human	ensembl	70_37	+1	known	missense	c.8662	p.K2888E	0.999	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd,pfam_Thrombospondin_1_rpt,superfamily_Green_fluorescent_prot-like,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like	-	no_errors	HMCN1	HGNC
HN1L	90861	genome.wustl.edu	37	16	1741844	1741844	+	Missense_Mutation	SNP	G	G	A			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	16	1741844	1741844	G	A	SNP	HN1L	ENST00000248098	human	ensembl	70_37	+1	known	missense	c.194	p.G65E	0.999	NULL	NULL	-	no_errors	HN1L	HGNC
HRNR	388697	genome.wustl.edu	37	1	152189237	152189237	+	Missense_Mutation	SNP	C	C	G			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	1	152189237	152189237	C	G	SNP	HRNR	ENST00000368801	human	ensembl	70_37	-1	known	missense	c.4868	p.S1623T	0.000	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_HAND_2	-	no_errors	HRNR	HGNC
HSPG2	3339	genome.wustl.edu	37	1	22169400	22169400	+	Missense_Mutation	SNP	G	G	C			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	1	22169400	22169400	G	C	SNP	HSPG2	ENST00000374695	human	ensembl	70_37	-1	known	missense	c.8773	p.Q2925E	0.995	pfscan_Ig-like	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Laminin_G,pfam_Laminin_B_type_IV,pfam_EGF_laminin,pfam_LDrepeatLR_classA_rpt,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_SEA,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Laminin_B_subgr,smart_EGF_laminin,smart_EGF-like_Ca-bd,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_LDrepeatLR_classA_rpt,pfscan_SEA,pfscan_Ig-like	-	no_errors	HSPG2	HGNC
HTR1D	3352	genome.wustl.edu	37	1	23519579	23519579	+	Nonstop_Mutation	SNP	C	C	A			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	1	23519579	23519579	C	A	SNP	HTR1D	ENST00000314113	human	ensembl	70_37	-1	known	nonstop	c.1134	p.*378Y	0.396	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_5HT1D_rcpt,prints_5HT_rcpt	-	no_errors	HTR1D	HGNC
IGF1R	3480	genome.wustl.edu	37	15	99465401	99465401	+	Silent	SNP	C	C	T			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	15	99465401	99465401	C	T	SNP	IGF1R	ENST00000268035	human	ensembl	70_37	+1	known	silent	c.2226	p.V742	0.119	pirsf_Tyr_kinase_insulin-like_rcpt,superfamily_Fibronectin_type3,smart_Fibronectin_type3	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_cat_dom,pfam_Furin-like_Cys-rich_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt,superfamily_Fibronectin_type3,smart_Furin_repeat,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom	-	no_errors	IGF1R	HGNC
IGSF10	285313	genome.wustl.edu	37	3	151155402	151155402	+	Missense_Mutation	SNP	C	C	T			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	3	151155402	151155402	C	T	SNP	IGSF10	ENST00000282466	human	ensembl	70_37	-1	known	missense	c.6947	p.R2316Q	0.999	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_errors	IGSF10	HGNC
KIAA1211	57482	genome.wustl.edu	37	4	57180592	57180592	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	4	57180592	57180592	T	-	DEL	KIAA1211	ENST00000504228	human	ensembl	70_37	+1	known	frame_shift_del	c.924	p.E309fs	0.000	NULL	NULL	-	no_errors	KIAA1211	HGNC
KIAA1211	57482	genome.wustl.edu	37	4	57180594	57180595	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	4	57180594	57180595	-	G	INS	KIAA1211	ENST00000504228	human	ensembl	70_37	+1	known	frame_shift_ins	c.926_927	p.E310fs	0.011:0.002	NULL	NULL	-	no_errors	KIAA1211	HGNC
LHX9	56956	genome.wustl.edu	37	1	197901077	197901077	+	Missense_Mutation	SNP	A	A	C			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	1	197901077	197901077	A	C	SNP	LHX9	ENST00000561173	human	ensembl	70_37	+1	putative	missense	c.983	p.Q328P	1.000	NULL	pfam_Znf_LIM,pfam_Homeodomain,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeodomain,pfscan_Znf_LIM,pfscan_Homeodomain	-	no_errors	LHX9	HGNC
LOC619207	619207	genome.wustl.edu	37	10	135271991	135271991	+	Missense_Mutation	SNP	G	G	C			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	10	135271991	135271991	G	C	SNP	LOC619207	ENST00000333815	human	ensembl	70_37	+1	putative	missense	c.810	p.Q270H	0.337	pfam_Srcr_rcpt,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_Srcr_rcpt	pfam_Srcr_rcpt,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_Srcr_rcpt,prints_Srcr_rcpt	-	no_errors	RP11-108K14.4	Clone_based_vega_gene
LPHN3	23284	genome.wustl.edu	37	4	62761547	62761547	+	Missense_Mutation	SNP	C	C	G			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	4	62761547	62761547	C	G	SNP	LPHN3	ENST00000507625	human	ensembl	70_37	+1	known	missense	c.1882	p.Q628E	1.000	pfam_DUF3497	pfam_GPCR_2_latrophilin_rcpt_C,pfam_Olfac-like,pfam_DUF3497,pfam_GPCR_2_secretin-like,pfam_Lectin_gal-bd_dom,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,smart_Olfac-like,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Lectin_gal-bd_dom,pfscan_Olfac-like,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_latrophilin,prints_GPCR_2_secretin-like	-	no_errors	LPHN3	HGNC
LYST	1130	genome.wustl.edu	37	1	235973634	235973634	+	Missense_Mutation	SNP	G	G	T			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	1	235973634	235973634	G	T	SNP	LYST	ENST00000389793	human	ensembl	70_37	-1	known	missense	c.484	p.Q162K	1.000	NULL	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	LYST	HGNC
MAGEB1	4112	genome.wustl.edu	37	X	30269213	30269213	+	Silent	SNP	G	G	A			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	X	30269213	30269213	G	A	SNP	MAGEB1	ENST00000378981	human	ensembl	70_37	+1	known	silent	c.603	p.L201	0.046	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB1	HGNC
MAGEE1	57692	genome.wustl.edu	37	X	75649283	75649283	+	Silent	SNP	G	G	A			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	X	75649283	75649283	G	A	SNP	MAGEE1	ENST00000361470	human	ensembl	70_37	+1	known	silent	c.960	p.V320	0.001	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEE1	HGNC
MAGEE1	57692	genome.wustl.edu	37	X	75649307	75649307	+	Silent	SNP	G	G	A			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	X	75649307	75649307	G	A	SNP	MAGEE1	ENST00000361470	human	ensembl	70_37	+1	known	silent	c.984	p.L328	0.000	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEE1	HGNC
KMT2D	8085	genome.wustl.edu	37	12	49439723	49439723	+	Missense_Mutation	SNP	G	G	A			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	12	49439723	49439723	G	A	SNP	MLL2	ENST00000301067	human	ensembl	70_37	-1	known	missense	c.4721	p.P1574L	0.999	superfamily_Znf_FYVE_PHD	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_superfamily,smart_Znf_PHD,smart_Znf_RING,smart_HMG_superfamily,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	MLL2	HGNC
MYH2	4620	genome.wustl.edu	37	17	10427875	10427875	+	Missense_Mutation	SNP	G	G	A			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	17	10427875	10427875	G	A	SNP	MYH2	ENST00000245503	human	ensembl	70_37	-1	known	missense	c.5083	p.R1695W	0.998	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_Prefoldin,superfamily_Ribosomal_L29,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH2	HGNC
NAB2	4665	genome.wustl.edu	37	12	57488487	57488487	+	Missense_Mutation	SNP	G	G	A			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	12	57488487	57488487	G	A	SNP	NAB2	ENST00000300131	human	ensembl	70_37	+1	known	missense	c.1561	p.E521K	1.000	NULL	pfam_NAB_co-repressor_dom,pfam_Nab_N,superfamily_SAM/pointed	-	no_errors	NAB2	HGNC
NAPSA	9476	genome.wustl.edu	37	19	50865026	50865026	+	Missense_Mutation	SNP	C	C	T			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	19	50865026	50865026	C	T	SNP	NAPSA	ENST00000253719	human	ensembl	70_37	-1	known	missense	c.362	p.R121Q	0.023	pfam_Peptidase_A1,superfamily_Peptidase_aspartic	pfam_Peptidase_A1,superfamily_Peptidase_aspartic,prints_Peptidase_A1	-	no_errors	NAPSA	HGNC
NAV3	89795	genome.wustl.edu	37	12	78515749	78515749	+	Missense_Mutation	SNP	C	C	G			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	12	78515749	78515749	C	G	SNP	NAV3	ENST00000397909	human	ensembl	70_37	+1	known	missense	c.3779	p.S1260C	1.000	NULL	pfam_CH-domain,pfam_ATPase_AAA_core,superfamily_CH-domain,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV3	HGNC
NFE2L2	4780	genome.wustl.edu	37	2	178098810	178098810	+	Missense_Mutation	SNP	C	C	T			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	2	178098810	178098810	C	T	SNP	NFE2L2	ENST00000397062	human	ensembl	70_37	-1	known	missense	c.235	p.E79K	1.000	NULL	pfam_bZIP,superfamily_Euk_TF_DNA-bd,superfamily_Serpin_dom,smart_bZIP,pfscan_bZIP	-	no_errors	NFE2L2	HGNC
NUDT12	83594	genome.wustl.edu	37	5	102895948	102895948	+	Missense_Mutation	SNP	A	A	G			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	5	102895948	102895948	A	G	SNP	NUDT12	ENST00000230792	human	ensembl	70_37	-1	known	missense	c.2	p.M1T	1.000	NULL	pfam_NUDIX_hydrolase_dom,pfam_Ankyrin_rpt,pfam_Znr_NADH_PPase,pfam_NADH_PPase-like_N,superfamily_NUDIX_hydrolase_dom-like,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	NUDT12	HGNC
OGT	8473	genome.wustl.edu	37	X	70779275	70779275	+	Silent	SNP	G	G	A			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	X	70779275	70779275	G	A	SNP	OGT	ENST00000373719	human	ensembl	70_37	+1	known	silent	c.1761	p.E587	1.000	NULL	pfam_TPR-1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	OGT	HGNC
OR2C1	4993	genome.wustl.edu	37	16	3406533	3406533	+	Missense_Mutation	SNP	T	T	C			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	16	3406533	3406533	T	C	SNP	OR2C1	ENST00000304936	human	ensembl	70_37	+1	known	missense	c.593	p.V198A	0.954	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2C1	HGNC
OR5D14	219436	genome.wustl.edu	37	11	55563530	55563530	+	Missense_Mutation	SNP	C	C	T			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	11	55563530	55563530	C	T	SNP	OR5D14	ENST00000335605	human	ensembl	70_37	+1	known	missense	c.499	p.R167W	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5D14	HGNC
OSBPL9	114883	genome.wustl.edu	37	1	52238276	52238276	+	Splice_Site	SNP	G	G	A			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	1	52238276	52238276	G	A	SNP	OSBPL9	ENST00000371710	human	ensembl	70_37	+1	known	splice_site	c.1106-1	e14-1	1.000	-	-	-	no_errors	OSBPL9	HGNC
PDHA2	5161	genome.wustl.edu	37	4	96762259	96762259	+	Missense_Mutation	SNP	G	G	T			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	4	96762259	96762259	G	T	SNP	PDHA2	ENST00000295266	human	ensembl	70_37	+1	known	missense	c.958	p.D320Y	0.967	pfam_DH_E1,tigrfam_Pyrv_DH_E1_asu_subgrp-y	pfam_DH_E1,tigrfam_Pyrv_DH_E1_asu_subgrp-y	-	no_errors	PDHA2	HGNC
PGLYRP2	114770	genome.wustl.edu	37	19	15580365	15580365	+	Silent	SNP	G	G	A			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	19	15580365	15580365	G	A	SNP	PGLYRP2	ENST00000292609	human	ensembl	70_37	-1	known	silent	c.1719	p.A573	0.031	NULL	pfam_Amidase_domain,superfamily_Amidase_domain,smart_PGRP_domain_met/bac,smart_Amidase_domain	-	no_errors	PGLYRP2	HGNC
PIK3CA	5290	genome.wustl.edu	37	3	178916930	178916930	+	Missense_Mutation	SNP	G	G	T			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	3	178916930	178916930	G	T	SNP	PIK3CA	ENST00000263967	human	ensembl	70_37	+1	known	missense	c.317	p.G106V	1.000	pfam_PI3K_adapt-bd_dom,smart_PI3K_adapt-bd_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC
PLXDC2	84898	genome.wustl.edu	37	10	20506461	20506461	+	Missense_Mutation	SNP	G	G	T			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	10	20506461	20506461	G	T	SNP	PLXDC2	ENST00000377252	human	ensembl	70_37	+1	known	missense	c.1229	p.R410I	0.976	NULL	pfam_Plexin_repeat,superfamily_Plexin-like_fold,smart_Plexin-like	-	no_errors	PLXDC2	HGNC
PPIL6	285755	genome.wustl.edu	37	6	109752404	109752404	+	Missense_Mutation	SNP	C	C	T			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	6	109752404	109752404	C	T	SNP	PPIL6	ENST00000521072	human	ensembl	70_37	-1	known	missense	c.376	p.A126T	0.976	NULL	pfam_Cyclophilin-like_PPIase_dom,superfamily_Cyclophilin-like_PPIase_dom,pfscan_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	PPIL6	HGNC
PRMT5	10419	genome.wustl.edu	37	14	23398532	23398532	+	Silent	SNP	G	G	A			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	14	23398532	23398532	G	A	SNP	PRMT5	ENST00000324366	human	ensembl	70_37	-1	known	silent	c.39	p.R13	1.000	pirsf_Arg_MeTrfase_PRMT5	pfam_Arg_MeTrfase,pirsf_Arg_MeTrfase_PRMT5	-	no_errors	PRMT5	HGNC
PSTPIP2	9050	genome.wustl.edu	37	18	43579406	43579406	+	Missense_Mutation	SNP	T	T	C			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	18	43579406	43579406	T	C	SNP	PSTPIP2	ENST00000409746	human	ensembl	70_37	-1	known	missense	c.512	p.E171G	1.000	NULL	pfam_FCH,smart_FCH,pfscan_FCH	-	no_errors	PSTPIP2	HGNC
PTH2R	5746	genome.wustl.edu	37	2	209358187	209358187	+	Missense_Mutation	SNP	C	C	T			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	2	209358187	209358187	C	T	SNP	PTH2R	ENST00000272847	human	ensembl	70_37	+1	known	missense	c.1456	p.P486S	0.807	NULL	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	PTH2R	HGNC
RANBP17	64901	genome.wustl.edu	37	5	170722906	170722906	+	Silent	SNP	A	A	C			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	5	170722906	170722906	A	C	SNP	RANBP17	ENST00000523189	human	ensembl	70_37	+1	known	silent	c.3058	p.R1020	1.000	NULL	pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	RANBP17	HGNC
RPGR	6103	genome.wustl.edu	37	X	38145271	38145272	+	In_Frame_Ins	INS	-	-	CCC			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	X	38145271	38145272	-	CCC	INS	RPGR	ENST00000378505	human	ensembl	70_37	-1	known	in_frame_ins	c.2981_2980	p.994in_frame_insG	0.060:0.135	NULL	pfam_Reg_chr_condens,superfamily_Reg_csome_cond/b-lactamase_inh,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	RPGR	HGNC
RUNDC1	146923	genome.wustl.edu	37	17	41142345	41142345	+	Missense_Mutation	SNP	A	A	G			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	17	41142345	41142345	A	G	SNP	RUNDC1	ENST00000361677	human	ensembl	70_37	+1	known	missense	c.868	p.S290G	1.000	NULL	pfam_Run,smart_Run,pfscan_Run	-	no_errors	RUNDC1	HGNC
SCARF1	8578	genome.wustl.edu	37	17	1540334	1540334	+	Missense_Mutation	SNP	C	C	T			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	17	1540334	1540334	C	T	SNP	SCARF1	ENST00000263071	human	ensembl	70_37	-1	known	missense	c.1387	p.V463M	0.052	NULL	pfam_EGF_laminin,superfamily_Growth_fac_rcpt,smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	SCARF1	HGNC
SERPINA9	327657	genome.wustl.edu	37	14	94945595	94945595	+	RNA	SNP	C	C	T			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	14	94945595	94945595	C	T	SNP	SERPINA9	ENST00000539349	human	ensembl	70_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	SERPINA9	HGNC
SHANK3	85358	genome.wustl.edu	37	22	51117841	51117841	+	Silent	SNP	T	T	C			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	22	51117841	51117841	T	C	SNP	SHANK3	ENST00000262795	human	ensembl	70_37	+1	known	silent	c.870	p.C290	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_SAM_type1,pfam_Ankyrin_rpt,pfam_SAM_2,pfam_SH3_2,pfam_PDZ,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SAM/pointed,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK3	HGNC
SIGLEC1	6614	genome.wustl.edu	37	20	3677954	3677954	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	20	3677954	3677954	G	A	SNP	SIGLEC1	ENST00000344754	human	ensembl	70_37	-1	known	nonsense	c.2158	p.Q720*	0.001	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	SIGLEC1	HGNC
SLC24A3	57419	genome.wustl.edu	37	20	19666001	19666001	+	Silent	SNP	C	C	T			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	20	19666001	19666001	C	T	SNP	SLC24A3	ENST00000328041	human	ensembl	70_37	+1	known	silent	c.1320	p.T440	0.995	tigrfam_K/Na/Ca-exchanger	pfam_NaCa_Exmemb,tigrfam_K/Na/Ca-exchanger	-	no_errors	SLC24A3	HGNC
STXBP5	134957	genome.wustl.edu	37	6	147680232	147680232	+	Missense_Mutation	SNP	A	A	G			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	6	147680232	147680232	A	G	SNP	STXBP5	ENST00000321680	human	ensembl	70_37	+1	known	missense	c.2318	p.N773S	1.000	NULL	pfam_LLGL2,pfam_WD40_repeat,pfam_Lgl_C,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,pfscan_Synaptobrevin,prints_Lethal2_giant	-	no_errors	STXBP5	HGNC
SYNDIG1	79953	genome.wustl.edu	37	20	24523867	24523867	+	Missense_Mutation	SNP	C	C	T			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	20	24523867	24523867	C	T	SNP	SYNDIG1	ENST00000376862	human	ensembl	70_37	+1	known	missense	c.134	p.A45V	0.691	NULL	pfam_Interferon-induced_TM_protein	-	no_errors	SYNDIG1	HGNC
SYNE1	23345	genome.wustl.edu	37	6	152510392	152510392	+	Missense_Mutation	SNP	G	G	A			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	6	152510392	152510392	G	A	SNP	SYNE1	ENST00000265368	human	ensembl	70_37	-1	known	missense	c.23296	p.H7766Y	1.000	superfamily_Calpain_domain_III,superfamily_ABC_transptrTM_dom_typ1,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC_transptrTM_dom_typ1,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC
TCEB3B	51224	genome.wustl.edu	37	18	44561176	44561176	+	Missense_Mutation	SNP	C	C	G			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	18	44561176	44561176	C	G	SNP	TCEB3B	ENST00000332567	human	ensembl	70_37	-1	known	missense	c.460	p.E154Q	0.000	NULL	pfam_RNA_pol_II_trans_fac_SIII_A,pfam_TFIIS_N,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub	-	no_errors	TCEB3B	HGNC
THSD7A	221981	genome.wustl.edu	37	7	11419307	11419307	+	Missense_Mutation	SNP	C	C	T			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	7	11419307	11419307	C	T	SNP	THSD7A	ENST00000423059	human	ensembl	70_37	-1	known	missense	c.4540	p.D1514N	1.000	NULL	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD7A	HGNC
TMEM80	283232	genome.wustl.edu	37	11	695769	695769	+	Missense_Mutation	SNP	G	G	C			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	11	695769	695769	G	C	SNP	TMEM80	ENST00000397510	human	ensembl	70_37	+1	known	missense	c.17	p.R6P	0.009	NULL	pfam_Uncharacterised_TM-17	-	no_errors	TMEM80	HGNC
TRAK1	22906	genome.wustl.edu	37	3	42251577	42251578	+	In_Frame_Ins	INS	-	-	GGA			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	3	42251577	42251578	-	GGA	INS	TRAK1	ENST00000341421	human	ensembl	70_37	+1	known	in_frame_ins	c.1889_1890	p.634in_frame_insE	0.010:0.044	NULL	pfam_HAP1_N,pfam_Traffickng_kinesin-bd_prot_dom	-	no_errors	TRAK1	HGNC
TRIOBP	11078	genome.wustl.edu	37	22	38151132	38151132	+	Missense_Mutation	SNP	G	G	A			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	22	38151132	38151132	G	A	SNP	TRIOBP	ENST00000406386	human	ensembl	70_37	+1	known	missense	c.5512	p.D1838N	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	TRIOBP	HGNC
TTN	7273	genome.wustl.edu	37	2	179430904	179430904	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	2	179430904	179430904	T	-	DEL	TTN	ENST00000342992	human	ensembl	70_37	-1	known	frame_shift_del	c.72251	p.N24084fs	1.000	pfam_Ig_I-set,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC
TTN	7273	genome.wustl.edu	37	2	179584117	179584117	+	Silent	SNP	G	G	T			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	2	179584117	179584117	G	T	SNP	TTN	ENST00000342992	human	ensembl	70_37	-1	known	silent	c.20268	p.A6756	0.002	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC
WRN	7486	genome.wustl.edu	37	8	30969312	30969312	+	Missense_Mutation	SNP	C	C	G			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	8	30969312	30969312	C	G	SNP	WRN	ENST00000298139	human	ensembl	70_37	+1	known	missense	c.2270	p.T757R	0.884	pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	pfam_3'-5'_exonuclease_dom,pfam_Helicase_C,pfam_RQC_domain,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/RNaseD_C,superfamily_RNaseH-like_dom,superfamily_HRDC-like,smart_3'-5'_exonuclease_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_RQC_domain,smart_Helicase/RNaseD_C,pfscan_Helicase/RNaseD_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	WRN	HGNC
ZDHHC11B	653082	genome.wustl.edu	37	5	710972	710973	+	RNA	DEL	GA	GA	-			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	5	710972	710973	GA	-	DEL	ZDHHC11B	ENST00000522356	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.714:0.115	-	-	-	no_errors	ZDHHC11B	HGNC
ZFP28	140612	genome.wustl.edu	37	19	57065086	57065086	+	Missense_Mutation	SNP	T	T	G			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	19	57065086	57065086	T	G	SNP	ZFP28	ENST00000301318	human	ensembl	70_37	+1	known	missense	c.932	p.F311C	0.028	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZFP28	HGNC
ZNF277	11179	genome.wustl.edu	37	7	111846792	111846792	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	7	111846792	111846792	G	-	DEL	ZNF277	ENST00000361822	human	ensembl	70_37	+1	known	frame_shift_del	c.21	p.A9fs	0.920	NULL	pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF277	HGNC
ZNF595	152687	genome.wustl.edu	37	4	60294	60294	+	Nonstop_Mutation	SNP	T	T	C			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	4	60294	60294	T	C	SNP	ZNF595	ENST00000526473	human	ensembl	70_37	+1	known	nonstop	c.277	p.*93Q	0.000	NULL	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	-	no_errors	ZNF595	HGNC
ZNF702P	79986	genome.wustl.edu	37	19	53473389	53473389	+	RNA	SNP	T	T	C			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	19	53473389	53473389	T	C	SNP	ZNF702P	ENST00000270443	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.155	-	-	-	no_errors	ZNF702P	HGNC
ZRANB2	9406	genome.wustl.edu	37	1	71535038	71535038	+	Missense_Mutation	SNP	A	A	C			TCGA-HG-A2PA-01A-11D-A20U-09	TCGA-HG-A2PA-10B-01D-A20U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8c0459ab-a4c1-470b-9548-f3ee12a7d7aa	c8202693-7be4-42e2-92cc-0cb1899696e4	1	71535038	71535038	A	C	SNP	ZRANB2	ENST00000370920	human	ensembl	70_37	-1	known	missense	c.691	p.S231A	1.000	pirsf_UCP037956_Znf_RanB2	pfam_Znf_RanBP2,smart_Znf_RanBP2,pirsf_UCP037956_Znf_RanB2,pfscan_Znf_RanBP2	-	no_errors	ZRANB2	HGNC
