Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source
ABCA13	154664	genome.wustl.edu	37	7	48412032	48412032	+	Silent	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	7	48412032	48412032	C	T	SNP	ABCA13	ENST00000435803	human	ensembl	70_37	+1	known	silent	c.11071	p.L3691	0.931	NULL	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA13	HGNC
AKAP14	158798	genome.wustl.edu	37	X	119037199	119037199	+	Missense_Mutation	SNP	C	C	G			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	X	119037199	119037199	C	G	SNP	AKAP14	ENST00000371431	human	ensembl	70_37	+1	known	missense	c.13	p.Q5E	0.000	NULL	NULL	-	no_errors	AKAP14	HGNC
ALDH3A2	224	genome.wustl.edu	37	17	19566669	19566669	+	Missense_Mutation	SNP	G	G	C			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	17	19566669	19566669	G	C	SNP	ALDH3A2	ENST00000339618	human	ensembl	70_37	+1	known	missense	c.964	p.D322H	0.002	pfam_Aldehyde_DH_dom,pfam_Acyl-CoA_reduct_LuxC,superfamily_Ald_DH/histidinol_DH,pirsf_Aldehyde_DH_NAD(P)	pfam_Aldehyde_DH_dom,pfam_Acyl-CoA_reduct_LuxC,superfamily_Ald_DH/histidinol_DH,pirsf_Aldehyde_DH_NAD(P)	-	no_errors	ALDH3A2	HGNC
ANKRD55	79722	genome.wustl.edu	37	5	55407482	55407482	+	Missense_Mutation	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	5	55407482	55407482	G	A	SNP	ANKRD55	ENST00000341048	human	ensembl	70_37	-1	known	missense	c.1093	p.P365S	0.053	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD55	HGNC
ATP2B3	492	genome.wustl.edu	37	X	152808574	152808574	+	Silent	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	X	152808574	152808574	C	T	SNP	ATP2B3	ENST00000263519	human	ensembl	70_37	+1	known	silent	c.864	p.I288	1.000	pfam_ATPase_P-typ_ATPase-assoc-dom	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATP_Ca_trans_C,pfam_Dehalogen-like_hydro,pfam_ATPase_P-typ_cation-transptr_N,pfam_HAD-SF_hydro-like_3,superfamily_ATPase_cation_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_Ca-transp_PMCA,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP2B3	HGNC
ATP8B2	57198	genome.wustl.edu	37	1	154306643	154306643	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	1	154306643	154306643	G	A	SNP	ATP8B2	ENST00000368489	human	ensembl	70_37	+1	known	nonsense	c.749	p.W250*	1.000	pfam_ATPase_P-typ_ATPase-assoc-dom,tigrfam_ATPase_P-typ_Plipid-transl	pfam_ATPase_P-typ_ATPase-assoc-dom,superfamily_HAD-like_dom,superfamily_ATPase_cation_domN,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_Plipid-transl,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP8B2	HGNC
BCL6	604	genome.wustl.edu	37	3	187443293	187443293	+	Frame_Shift_Del	DEL	A	A	-			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	3	187443293	187443293	A	-	DEL	BCL6	ENST00000232014	human	ensembl	70_37	-1	known	frame_shift_del	c.1833	p.F611fs	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	BCL6	HGNC
BRSK2	9024	genome.wustl.edu	37	11	1464590	1464590	+	Missense_Mutation	SNP	C	C	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	11	1464590	1464590	C	A	SNP	BRSK2	ENST00000382179	human	ensembl	70_37	+1	known	missense	c.728	p.A243E	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	BRSK2	HGNC
BRWD1	54014	genome.wustl.edu	37	21	40570860	40570860	+	Missense_Mutation	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	21	40570860	40570860	C	T	SNP	BRWD1	ENST00000333229	human	ensembl	70_37	-1	known	missense	c.5482	p.E1828K	0.999	NULL	pfam_WD40_repeat,pfam_Bromodomain,superfamily_WD40_repeat_dom,superfamily_Bromodomain,smart_WD40_repeat,smart_Bromodomain,pfscan_Bromodomain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Bromodomain	-	no_errors	BRWD1	HGNC
BRWD3	254065	genome.wustl.edu	37	X	79999566	79999566	+	Missense_Mutation	SNP	G	G	C			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	X	79999566	79999566	G	C	SNP	BRWD3	ENST00000373275	human	ensembl	70_37	-1	known	missense	c.778	p.L260V	1.000	pfam_WD40_repeat,superfamily_Quino_amine_DH_bsu,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_Bromodomain,superfamily_Quino_amine_DH_bsu,superfamily_Bromodomain,smart_WD40_repeat,smart_Bromodomain,pfscan_Bromodomain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Bromodomain	-	no_errors	BRWD3	HGNC
BUD13	84811	genome.wustl.edu	37	11	116633493	116633493	+	Missense_Mutation	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	11	116633493	116633493	G	A	SNP	BUD13	ENST00000260210	human	ensembl	70_37	-1	known	missense	c.812	p.S271F	0.973	NULL	pfam_Bud13	-	no_errors	BUD13	HGNC
C11orf80	79703	genome.wustl.edu	37	11	66512290	66512291	+	In_Frame_Ins	INS	-	-	GGC			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	11	66512290	66512291	-	GGC	INS	C11orf80	ENST00000360962	human	ensembl	70_37	+1	known	in_frame_ins	c.77_78	p.30in_frame_insA	0.001:0.003	NULL	NULL	-	no_errors	C11orf80	HGNC
C12orf50	160419	genome.wustl.edu	37	12	88381726	88381726	+	Missense_Mutation	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	12	88381726	88381726	G	A	SNP	C12orf50	ENST00000298699	human	ensembl	70_37	-1	known	missense	c.718	p.H240Y	1.000	NULL	NULL	-	no_errors	C12orf50	HGNC
C14orf28	122525	genome.wustl.edu	37	14	45372445	45372445	+	Missense_Mutation	SNP	G	G	C			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	14	45372445	45372445	G	C	SNP	C14orf28	ENST00000325192	human	ensembl	70_37	+1	known	missense	c.560	p.R187T	1.000	NULL	NULL	-	no_errors	C14orf28	HGNC
C21orf88	114041	genome.wustl.edu	37	21	40981555	40981555	+	Missense_Mutation	SNP	C	C	G			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	21	40981555	40981555	C	G	SNP	C21orf88	ENST00000380612	human	ensembl	70_37	-1	putative	missense	c.107	p.R36T	0.000	NULL	NULL	-	no_errors	C21orf88	HGNC
CASP2	835	genome.wustl.edu	37	7	142989416	142989416	+	Missense_Mutation	SNP	G	G	C			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	7	142989416	142989416	G	C	SNP	CASP2	ENST00000310447	human	ensembl	70_37	+1	known	missense	c.249	p.Q83H	0.999	pfam_CARD,superfamily_DEATH-like,smart_CARD,pirsf_Caspase_IL-1_beta,pfscan_CARD	pfam_Pept_C14_cat,pfam_CARD,superfamily_DEATH-like,smart_CARD,smart_Pept_C14_p45_core,pirsf_Caspase_IL-1_beta,pfscan_CARD,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14_p45_core	-	no_errors	CASP2	HGNC
CCDC122	160857	genome.wustl.edu	37	13	44411505	44411505	+	Missense_Mutation	SNP	G	G	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	13	44411505	44411505	G	T	SNP	CCDC122	ENST00000444614	human	ensembl	70_37	-1	putative	missense	c.733	p.Q245K	1.000	NULL	NULL	-	no_errors	CCDC122	HGNC
CCDC88A	55704	genome.wustl.edu	37	2	55561531	55561531	+	Missense_Mutation	SNP	C	C	G			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	2	55561531	55561531	C	G	SNP	CCDC88A	ENST00000436346	human	ensembl	70_37	-1	known	missense	c.2426	p.R809T	1.000	superfamily_Prefoldin	pfam_HOOK,superfamily_Prefoldin,superfamily_t-SNARE	-	no_errors	CCDC88A	HGNC
CCDC88A	55704	genome.wustl.edu	37	2	55562045	55562045	+	Missense_Mutation	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	2	55562045	55562045	C	T	SNP	CCDC88A	ENST00000436346	human	ensembl	70_37	-1	known	missense	c.1912	p.E638K	1.000	NULL	pfam_HOOK,superfamily_Prefoldin,superfamily_t-SNARE	-	no_errors	CCDC88A	HGNC
CCNL2	81669	genome.wustl.edu	37	1	1322818	1322818	+	Silent	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	1	1322818	1322818	G	A	SNP	CCNL2	ENST00000400809	human	ensembl	70_37	-1	known	silent	c.1356	p.C452	1.000	pirsf_Cyclin_L	pfam_Cyclin_N,pfam_Cyclin_C,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_L	-	no_errors	CCNL2	HGNC
CDC14A	8556	genome.wustl.edu	37	1	100908539	100908539	+	Missense_Mutation	SNP	A	A	G			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	1	100908539	100908539	A	G	SNP	CDC14A	ENST00000361544	human	ensembl	70_37	+1	known	missense	c.506	p.Y169C	1.000	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Dual-sp_phosphatase_subgr_cat,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-specificity_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	CDC14A	HGNC
CGB1	114335	genome.wustl.edu	37	19	49538946	49538946	+	Missense_Mutation	SNP	T	T	C			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	19	49538946	49538946	T	C	SNP	CGB1	ENST00000301407	human	ensembl	70_37	-1	known	missense	c.389	p.D130G	0.493	NULL	pfam_Cys_knot,smart_Gonadotropin_bsu	-	no_errors	CGB1	HGNC
CHD2	1106	genome.wustl.edu	37	15	93515518	93515518	+	Silent	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	15	93515518	93515518	G	A	SNP	CHD2	ENST00000557381	human	ensembl	70_37	+1	putative	silent	c.2376	p.K792	1.000	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_Helicase_C,superfamily_Chromodomain-like,superfamily_Homeodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD2	HGNC
CHRNB2	1141	genome.wustl.edu	37	1	154544260	154544260	+	Missense_Mutation	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	1	154544260	154544260	G	A	SNP	CHRNB2	ENST00000368476	human	ensembl	70_37	+1	known	missense	c.961	p.V321M	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNB2	HGNC
CLASP2	23122	genome.wustl.edu	37	3	33580331	33580331	+	Missense_Mutation	SNP	C	C	G			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	3	33580331	33580331	C	G	SNP	CLASP2	ENST00000399362	human	ensembl	70_37	-1	known	missense	c.3529	p.D1177H	1.000	superfamily_ARM-type_fold	pfam_CLASP_N_dom,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	CLASP2	HGNC
CNTD2	79935	genome.wustl.edu	37	19	40732342	40732342	+	Silent	SNP	C	C	G			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	19	40732342	40732342	C	G	SNP	CNTD2	ENST00000430325	human	ensembl	70_37	-1	known	silent	c.207	p.L69	0.568	pirsf_Cyclin_A/B/D/E	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_A/B/D/E	-	no_errors	CNTD2	HGNC
COL6A5	256076	genome.wustl.edu	37	3	130124439	130124439	+	Missense_Mutation	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	3	130124439	130124439	G	A	SNP	COL6A5	ENST00000265379	human	ensembl	70_37	+1	known	missense	c.4289	p.R1430Q	0.706	pfam_Collagen	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A5	HGNC
DHFRL1	200895	genome.wustl.edu	37	3	93780081	93780081	+	Missense_Mutation	SNP	C	C	G			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	3	93780081	93780081	C	G	SNP	DHFRL1	ENST00000314636	human	ensembl	70_37	-1	known	missense	c.275	p.R92T	0.982	pfam_DHFR_dom,superfamily_DHFR-like_dom	pfam_DHFR_dom,superfamily_DHFR-like_dom,prints_DHFR	-	no_errors	DHFRL1	HGNC
DHX16	8449	genome.wustl.edu	37	6	30633382	30633382	+	Silent	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	6	30633382	30633382	G	A	SNP	DHX16	ENST00000376442	human	ensembl	70_37	-1	known	silent	c.795	p.H265	0.131	NULL	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX16	HGNC
DLC1	10395	genome.wustl.edu	37	8	13357394	13357394	+	Missense_Mutation	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	8	13357394	13357394	C	T	SNP	DLC1	ENST00000276297	human	ensembl	70_37	-1	known	missense	c.187	p.D63N	0.952	NULL	pfam_START_lipid-bd,pfam_RhoGAP_dom,pfam_SAM_2,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,smart_START_lipid-bd,pfscan_START_lipid-bd,pfscan_RhoGAP_dom	-	no_errors	DLC1	HGNC
DLX3	1747	genome.wustl.edu	37	17	48072207	48072207	+	Silent	SNP	C	C	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	17	48072207	48072207	C	A	SNP	DLX3	ENST00000434704	human	ensembl	70_37	-1	known	silent	c.156	p.S52	0.997	pfam_Distal-less_N	pfam_Distal-less_N,pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	DLX3	HGNC
DOCK1	1793	genome.wustl.edu	37	10	129172094	129172094	+	Missense_Mutation	SNP	G	G	C			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	10	129172094	129172094	G	C	SNP	DOCK1	ENST00000280333	human	ensembl	70_37	+1	known	missense	c.3419	p.R1140T	1.000	superfamily_ARM-type_fold	pfam_DOCK_C,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,superfamily_Cyt_c_dom,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK1	HGNC
DST	667	genome.wustl.edu	37	6	56417462	56417462	+	Silent	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	6	56417462	56417462	G	A	SNP	DST	ENST00000370754	human	ensembl	70_37	-1	known	silent	c.16035	p.F5345	1.000	superfamily_ABC_transptrTM_dom_typ1	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC_transptrTM_dom_typ1,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_Ca-bd,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_HAND_2	-	no_errors	DST	HGNC
DYTN	391475	genome.wustl.edu	37	2	207572075	207572075	+	Missense_Mutation	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	2	207572075	207572075	G	A	SNP	DYTN	ENST00000452335	human	ensembl	70_37	-1	known	missense	c.247	p.P83S	0.982	pfam_EF-hand_dom_typ1	pfam_EF-hand_dom_typ2,pfam_EF-hand_dom_typ1,pfam_Znf_ZZ,smart_Znf_ZZ,pfscan_Znf_ZZ	-	no_errors	DYTN	HGNC
ENHO	375704	genome.wustl.edu	37	9	34521558	34521558	+	Missense_Mutation	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	9	34521558	34521558	C	T	SNP	ENHO	ENST00000399775	human	ensembl	70_37	-1	known	missense	c.136	p.E46K	0.605	NULL	NULL	-	no_errors	ENHO	HGNC
ENPP1	5167	genome.wustl.edu	37	6	132171171	132171171	+	Missense_Mutation	SNP	A	A	G			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	6	132171171	132171171	A	G	SNP	ENPP1	ENST00000360971	human	ensembl	70_37	+1	known	missense	c.355	p.N119D	1.000	pfam_Somatomedin_B_dom,smart_Somatomedin_B_dom,pfscan_Somatomedin_B_dom,prints_Somatomedin_B_chordata	pfam_Phosphodiest/P_Trfase,pfam_Somatomedin_B_dom,pfam_DNA/RNA_non-sp_Endonuclease,superfamily_Alkaline_phosphatase_core,smart_Somatomedin_B_dom,smart_DNA/RNA_non-sp_Endonuclease,smart_Extracellular_endonuc_su_A,pfscan_Somatomedin_B_dom,prints_Somatomedin_B_chordata	-	no_errors	ENPP1	HGNC
ENSG00000210127	0	genome.wustl.edu	37	MT	5590	5590	+	RNA	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	MT	5590	5590	G	A	SNP	ENSG00000210127	ENST00000387392	human	ensembl	70_37	-1	novel	rna	NULL	NULL	NULL	-	-	-	no_errors	J01415.8	Clone_based_ensembl_gene
ENSG00000212884	0	genome.wustl.edu	37	GL000205.1	117544	117544	+	Missense_Mutation	SNP	G	G	C			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	GL000205.1	117544	117544	G	C	SNP	ENSG00000212884	ENST00000391571	human	ensembl	70_37	+1	known	missense	c.175	p.V59L	NULL	pfam_D-isomer_2_OHA_DH_cat_dom	pfam_D-isomer_2_OHA_DH_cat_dom	-	no_errors	AC011841.1	Clone_based_ensembl_gene
ENSG00000214970	0	genome.wustl.edu	37	17	10440966	10440966	+	Splice_Site	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	17	10440966	10440966	G	A	SNP	ENSG00000214970	ENST00000399342	human	ensembl	70_37	+1	known	splice_site	c.NULL	NULL	0.000	-	-	-	no_errors	CTC-297N7.7	Clone_based_vega_gene
ENSG00000233513	0	genome.wustl.edu	37	6	85398359	85398359	+	RNA	SNP	T	T	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	6	85398359	85398359	T	A	SNP	ENSG00000233513	ENST00000330469	human	ensembl	70_37	-1	putative	rna	NULL	NULL	0.885	-	-	-	no_errors	RP11-132M7.1	Clone_based_vega_gene
ENSG00000263544	0	genome.wustl.edu	37	GL000220.1	118253	118253	+	RNA	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	GL000220.1	118253	118253	C	T	SNP	ENSG00000263544	ENST00000582153	human	ensembl	70_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	AL592188.3	Clone_based_ensembl_gene
ERAP2	64167	genome.wustl.edu	37	5	96249054	96249054	+	Missense_Mutation	SNP	C	C	G			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	5	96249054	96249054	C	G	SNP	ERAP2	ENST00000437043	human	ensembl	70_37	+1	known	missense	c.2550	p.I850M	0.798	NULL	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	ERAP2	HGNC
ERBB2	2064	genome.wustl.edu	37	17	37879603	37879603	+	Missense_Mutation	SNP	G	G	C			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	17	37879603	37879603	G	C	SNP	ERBB2	ENST00000269571	human	ensembl	70_37	+1	known	missense	c.1978	p.G660R	1.000	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_cat_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ERBB2	HGNC
ERBB2	2064	genome.wustl.edu	37	17	37881425	37881425	+	Missense_Mutation	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	17	37881425	37881425	G	A	SNP	ERBB2	ENST00000269571	human	ensembl	70_37	+1	known	missense	c.2617	p.D873N	0.998	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfscan_Prot_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_cat_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ERBB2	HGNC
FCF1	51077	genome.wustl.edu	37	14	75182714	75182714	+	Missense_Mutation	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	14	75182714	75182714	C	T	SNP	FCF1	ENST00000556814	human	ensembl	70_37	+1	known	missense	c.161	p.T54I	1.000	NULL	NULL	-	no_errors	FCF1	HGNC
FOXJ2	55810	genome.wustl.edu	37	12	8192501	8192501	+	Missense_Mutation	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	12	8192501	8192501	G	A	SNP	FOXJ2	ENST00000162391	human	ensembl	70_37	+1	known	missense	c.73	p.E25K	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXJ2	HGNC
GABRB2	2561	genome.wustl.edu	37	5	160973755	160973755	+	RNA	SNP	A	A	G			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	5	160973755	160973755	A	G	SNP	GABRB2	ENST00000523730	human	ensembl	70_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	GABRB2	HGNC
GPR173	54328	genome.wustl.edu	37	X	53106076	53106076	+	Missense_Mutation	SNP	C	C	G			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	X	53106076	53106076	C	G	SNP	GPR173	ENST00000332582	human	ensembl	70_37	+1	known	missense	c.273	p.F91L	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR173	HGNC
GPR174	84636	genome.wustl.edu	37	X	78426971	78426971	+	Missense_Mutation	SNP	G	G	C			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	X	78426971	78426971	G	C	SNP	GPR174	ENST00000276077	human	ensembl	70_37	+1	known	missense	c.467	p.R156T	0.993	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_P2_purnocptor	-	no_errors	GPR174	HGNC
GTF2I	2969	genome.wustl.edu	37	7	74113412	74113412	+	Silent	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	7	74113412	74113412	C	T	SNP	GTF2I	ENST00000324896	human	ensembl	70_37	+1	known	silent	c.360	p.F120	1.000	pfam_GTF2I,superfamily_GTF2I,pirsf_TF_II-I,pfscan_GTF2I	pfam_GTF2I,superfamily_GTF2I,pirsf_TF_II-I,pfscan_GTF2I	-	no_errors	GTF2I	HGNC
HCFC2	29915	genome.wustl.edu	37	12	104474574	104474574	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	12	104474574	104474574	C	T	SNP	HCFC2	ENST00000229330	human	ensembl	70_37	+1	known	nonsense	c.733	p.R245*	1.000	pfam_Kelch_1	pfam_Kelch_1,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	HCFC2	HGNC
HGFAC	3083	genome.wustl.edu	37	4	3446052	3446052	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	4	3446052	3446052	G	T	SNP	HGFAC	ENST00000382774	human	ensembl	70_37	+1	known	nonsense	c.613	p.E205*	0.664	pfam_Fibronectin_type1,smart_Fibronectin_type1,pirsf_Coagulation_fac_XIIa/HGFA,pfscan_Fibronectin_type1	pfam_Peptidase_S1_S6,pfam_Kringle,pfam_FN_type2_col-bd,pfam_Fibronectin_type1,pfam_EG-like_dom,superfamily_Pept_cys/ser_Trypsin-like,superfamily_Kringle-like,smart_FN_type2_col-bd,smart_EG-like_dom,smart_Fibronectin_type1,smart_Kringle,smart_Peptidase_S1_S6,pirsf_Coagulation_fac_XIIa/HGFA,pfscan_EG-like_dom,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Kringle,pfscan_Peptidase_S1_S6,prints_Peptidase_S1A	-	no_errors	HGFAC	HGNC
HLA-G	3135	genome.wustl.edu	37	6	29796006	29796006	+	Missense_Mutation	SNP	G	G	C			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	6	29796006	29796006	G	C	SNP	HLA-G	ENST00000376828	human	ensembl	70_37	+1	known	missense	c.271	p.E91Q	0.000	pfam_MHC_I_a_a1/a2,prints_MHC_I_a_a1/a2	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like,prints_MHC_I_a_a1/a2	-	no_errors	HLA-G	HGNC
HSD17B14	51171	genome.wustl.edu	37	19	49339660	49339660	+	Silent	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	19	49339660	49339660	C	T	SNP	HSD17B14	ENST00000263278	human	ensembl	70_37	-1	known	silent	c.9	p.T3	0.000	NULL	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,pfam_Epimerase_deHydtase,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR,prints_DHB_DH	-	no_errors	HSD17B14	HGNC
IGF2-AS	51214	genome.wustl.edu	37	11	2168806	2168806	+	RNA	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	11	2168806	2168806	C	T	SNP	IGF2-AS	ENST00000381361	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.106	-	-	-	no_errors	IGF2-AS	HGNC
INSL3	3640	genome.wustl.edu	37	19	17927708	17927708	+	Missense_Mutation	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	19	17927708	17927708	G	A	SNP	INSL3	ENST00000379695	human	ensembl	70_37	-1	putative	missense	c.446	p.S149L	0.512	NULL	superfamily_Insulin-like	-	no_errors	INSL3	HGNC
ITGA8	8516	genome.wustl.edu	37	10	15561412	15561412	+	Splice_Site	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	10	15561412	15561412	C	T	SNP	ITGA8	ENST00000378076	human	ensembl	70_37	-1	known	splice_site	c.2983-1	e29-1	1.000	-	-	-	no_errors	ITGA8	HGNC
ITGAX	3687	genome.wustl.edu	37	16	31368669	31368669	+	Silent	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	16	31368669	31368669	C	T	SNP	ITGAX	ENST00000268296	human	ensembl	70_37	+1	known	silent	c.414	p.L138	0.034	NULL	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGAX	HGNC
ITPKA	3706	genome.wustl.edu	37	15	41786582	41786582	+	Missense_Mutation	SNP	G	G	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	15	41786582	41786582	G	T	SNP	ITPKA	ENST00000260386	human	ensembl	70_37	+1	known	missense	c.457	p.V153L	1.000	NULL	pfam_IPK	-	no_errors	ITPKA	HGNC
JPH3	57338	genome.wustl.edu	37	16	87678345	87678345	+	Silent	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	16	87678345	87678345	C	T	SNP	JPH3	ENST00000284262	human	ensembl	70_37	+1	known	silent	c.864	p.Y288	1.000	pirsf_Junctophilin,pfam_MORN,smart_MORN	pirsf_Junctophilin,pfam_MORN,smart_MORN	-	no_errors	JPH3	HGNC
GLTSCR1L	23506	genome.wustl.edu	37	6	42790704	42790704	+	Missense_Mutation	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	6	42790704	42790704	C	T	SNP	KIAA0240	ENST00000314073	human	ensembl	70_37	+1	known	missense	c.122	p.S41F	1.000	NULL	NULL	-	no_errors	KIAA0240	HGNC
KIF21B	23046	genome.wustl.edu	37	1	200977902	200977902	+	Silent	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	1	200977902	200977902	G	A	SNP	KIF21B	ENST00000422435	human	ensembl	70_37	-1	known	silent	c.442	p.L148	1.000	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_Prefoldin,smart_Kinesin_motor_dom,smart_WD40_repeat,pfscan_Kinesin_motor_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Kinesin_motor_dom	-	no_errors	KIF21B	HGNC
KLF17	128209	genome.wustl.edu	37	1	44596347	44596347	+	Silent	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	1	44596347	44596347	G	A	SNP	KLF17	ENST00000372299	human	ensembl	70_37	+1	known	silent	c.1089	p.K363	0.687	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF17	HGNC
KLRC1	3821	genome.wustl.edu	37	12	10603153	10603153	+	Silent	SNP	G	G	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	12	10603153	10603153	G	T	SNP	KLRC1	ENST00000359151	human	ensembl	70_37	-1	known	silent	c.213	p.L71	1.000	pfam_Herpes_UL45-like	pfam_C-type_lectin,pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	KLRC1	HGNC
LINC00029	100144596	genome.wustl.edu	37	20	61665882	61665882	+	RNA	SNP	G	G	C			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	20	61665882	61665882	G	C	SNP	LINC00029	ENST00000370341	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	LINC00029	HGNC
LMTK3	114783	genome.wustl.edu	37	19	49013842	49013842	+	Silent	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	19	49013842	49013842	G	A	SNP	LMTK3	ENST00000270238	human	ensembl	70_37	-1	known	silent	c.171	p.F57	1.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LMTK3	HGNC
LOC401463	401463	genome.wustl.edu	37	8	65488963	65488963	+	RNA	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	8	65488963	65488963	C	T	SNP	LOC401463	ENST00000517909	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	RP11-21C4.1	Clone_based_vega_gene
MAGEE1	57692	genome.wustl.edu	37	X	75648955	75648955	+	Missense_Mutation	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	X	75648955	75648955	C	T	SNP	MAGEE1	ENST00000361470	human	ensembl	70_37	+1	known	missense	c.632	p.S211F	0.000	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEE1	HGNC
MAGEE1	57692	genome.wustl.edu	37	X	75649207	75649207	+	Missense_Mutation	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	X	75649207	75649207	C	T	SNP	MAGEE1	ENST00000361470	human	ensembl	70_37	+1	known	missense	c.884	p.S295F	0.086	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEE1	HGNC
MAP2	4133	genome.wustl.edu	37	2	210561651	210561651	+	Silent	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	2	210561651	210561651	G	A	SNP	MAP2	ENST00000360351	human	ensembl	70_37	+1	known	silent	c.4398	p.K1466	1.000	pfam_MAP2_projctn	pfam_MAP2_projctn,pfam_Tau/MAP_tubulin-bd_rpt	-	no_errors	MAP2	HGNC
MAP2	4133	genome.wustl.edu	37	2	210561658	210561658	+	Missense_Mutation	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	2	210561658	210561658	G	A	SNP	MAP2	ENST00000360351	human	ensembl	70_37	+1	known	missense	c.4405	p.E1469K	1.000	pfam_MAP2_projctn	pfam_MAP2_projctn,pfam_Tau/MAP_tubulin-bd_rpt	-	no_errors	MAP2	HGNC
MAPK8IP1	9479	genome.wustl.edu	37	11	45924612	45924612	+	Missense_Mutation	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	11	45924612	45924612	G	A	SNP	MAPK8IP1	ENST00000241014	human	ensembl	70_37	+1	known	missense	c.1294	p.E432K	1.000	superfamily_SH3_domain	pfam_PTyr_interaction_dom,pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,smart_PTyr_interaction_dom,pfscan_PTyr_interaction_dom,pfscan_SH3_domain	-	no_errors	MAPK8IP1	HGNC
MDGA2	161357	genome.wustl.edu	37	14	47504461	47504461	+	Missense_Mutation	SNP	G	G	C			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	14	47504461	47504461	G	C	SNP	MDGA2	ENST00000557238	human	ensembl	70_37	-1	known	missense	c.652	p.Q218E	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	MDGA2	HGNC
MPP2	4355	genome.wustl.edu	37	17	41958920	41958920	+	Missense_Mutation	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	17	41958920	41958920	C	T	SNP	MPP2	ENST00000461854	human	ensembl	70_37	-1	known	missense	c.791	p.R264Q	0.019	pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_Guanylate_kin,pfam_L27_C,pfam_SH3_2,pfam_PDZ,pfam_SH3_domain,superfamily_SH3_domain,superfamily_PDZ,smart_L27,smart_PDZ,smart_SH3_domain,smart_Guanylate_kin/L-typ_Ca_channel,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin	-	no_errors	MPP2	HGNC
MT-ND5	4540	genome.wustl.edu	37	MT	13393	13393	+	Missense_Mutation	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	MT	13393	13393	G	A	SNP	MT-ND5	ENST00000361567	human	ensembl	70_37	+1	known	missense	c.1057	p.E353K	NULL	pfam_NADH_UbQ/plastoQ_OxRdtase,tigrfam_NADHpl_OxRdtase_5	pfam_NADH_UbQ/plastoQ_OxRdtase,pfam_NADH_DH_su5_C,pfam_NADH_UbQ_OxRdtase_chain5/L_N,tigrfam_NADHpl_OxRdtase_5	-	no_errors	MT-ND5	HGNC
MTR	4548	genome.wustl.edu	37	1	236958908	236958908	+	Silent	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	1	236958908	236958908	C	T	SNP	MTR	ENST00000418145	human	ensembl	70_37	+1	known	silent	c.288	p.L96	0.000	pfscan_S_MeTrfase	pfam_S_MeTrfase,superfamily_S_MeTrfase,pfscan_S_MeTrfase	-	no_errors	MTR	HGNC
NAV3	89795	genome.wustl.edu	37	12	78444771	78444771	+	Missense_Mutation	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	12	78444771	78444771	G	A	SNP	NAV3	ENST00000397909	human	ensembl	70_37	+1	known	missense	c.2360	p.R787Q	0.991	NULL	pfam_CH-domain,pfam_ATPase_AAA_core,superfamily_CH-domain,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV3	HGNC
NINL	22981	genome.wustl.edu	37	20	25477429	25477429	+	Missense_Mutation	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	20	25477429	25477429	C	T	SNP	NINL	ENST00000278886	human	ensembl	70_37	-1	known	missense	c.1180	p.E394K	1.000	NULL	pfam_EF-hand,smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	-	no_errors	NINL	HGNC
NUP205	23165	genome.wustl.edu	37	7	135276246	135276246	+	Missense_Mutation	SNP	A	A	G			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	7	135276246	135276246	A	G	SNP	NUP205	ENST00000285968	human	ensembl	70_37	+1	known	missense	c.1522	p.T508A	1.000	pfam_DUF3414	pfam_DUF3414	-	no_errors	NUP205	HGNC
OGN	4969	genome.wustl.edu	37	9	95152240	95152240	+	Nonsense_Mutation	SNP	C	C	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	9	95152240	95152240	C	A	SNP	OGN	ENST00000262551	human	ensembl	70_37	-1	known	nonsense	c.526	p.E176*	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	OGN	HGNC
PCDHA7	56141	genome.wustl.edu	37	5	140215713	140215713	+	Missense_Mutation	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	5	140215713	140215713	C	T	SNP	PCDHA7	ENST00000525929	human	ensembl	70_37	+1	known	missense	c.1745	p.P582L	0.011	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHA7	HGNC
PCDHGB1	56104	genome.wustl.edu	37	5	140730998	140730998	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	5	140730998	140730998	G	T	SNP	PCDHGB1	ENST00000523390	human	ensembl	70_37	+1	known	nonsense	c.1171	p.E391*	0.049	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB1	HGNC
PDXDC2P	283970	genome.wustl.edu	37	16	70068259	70068259	+	RNA	SNP	C	C	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	16	70068259	70068259	C	A	SNP	PDXDC2P	ENST00000529089	human	ensembl	70_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PDXDC2P	HGNC
PEPD	5184	genome.wustl.edu	37	19	33878885	33878885	+	Missense_Mutation	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	19	33878885	33878885	C	T	SNP	PEPD	ENST00000244137	human	ensembl	70_37	-1	known	missense	c.1255	p.D419N	0.997	pfam_Pept_M24_structural-domain,superfamily_Pept_M24_structural-domain	pfam_Pept_M24_structural-domain,pfam_Aminopep_P_N,superfamily_Pept_M24_structural-domain	-	no_errors	PEPD	HGNC
PIGO	84720	genome.wustl.edu	37	9	35094192	35094192	+	RNA	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	9	35094192	35094192	G	A	SNP	PIGO	ENST00000465745	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PIGO	HGNC
PIK3CA	5290	genome.wustl.edu	37	3	178936082	178936082	+	Missense_Mutation	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	3	178936082	178936082	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	70_37	+1	known	missense	c.1624	p.E542K	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC
PIK3CA	5290	genome.wustl.edu	37	3	178951964	178951964	+	Missense_Mutation	SNP	G	G	C			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	3	178951964	178951964	G	C	SNP	PIK3CA	ENST00000263967	human	ensembl	70_37	+1	known	missense	c.3019	p.G1007R	1.000	pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC
PLCD3	113026	genome.wustl.edu	37	17	43196380	43196380	+	Missense_Mutation	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	17	43196380	43196380	C	T	SNP	PLCD3	ENST00000322765	human	ensembl	70_37	-1	known	missense	c.715	p.E239K	1.000	NULL	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_Ca-dep,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_Ca-dep,pfscan_C2_membr_targeting,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCD3	HGNC
PLP1	5354	genome.wustl.edu	37	X	103041064	103041064	+	RNA	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	X	103041064	103041064	C	T	SNP	PLP1	ENST00000461231	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PLP1	HGNC
PRUNE2	158471	genome.wustl.edu	37	9	79319881	79319881	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	9	79319881	79319881	G	A	SNP	PRUNE2	ENST00000428286	human	ensembl	70_37	-1	known	nonsense	c.6232	p.R2078*	0.000	NULL	pfam_Bcl2-/adenovirus-E1B,pfam_CRAL-TRIO_dom,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	-	no_errors	PRUNE2	HGNC
PTPRF	5792	genome.wustl.edu	37	1	44088825	44088825	+	RNA	SNP	C	C	G			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	1	44088825	44088825	C	G	SNP	PTPRF	ENST00000496447	human	ensembl	70_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PTPRF	HGNC
PTPRQ	374462	genome.wustl.edu	37	12	81064201	81064201	+	Missense_Mutation	SNP	C	C	G			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	12	81064201	81064201	C	G	SNP	PTPRQ	ENST00000266688	human	ensembl	70_37	+1	known	missense	c.6520	p.L2174V	0.612	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Fibronectin_type3,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRQ	HGNC
RALGAPA2	57186	genome.wustl.edu	37	20	20596757	20596757	+	Missense_Mutation	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	20	20596757	20596757	C	T	SNP	RALGAPA2	ENST00000202677	human	ensembl	70_37	-1	known	missense	c.1618	p.D540N	1.000	NULL	pfam_Rap_GAP,superfamily_ARM-type_fold,pfscan_Rap_GAP	-	no_errors	RALGAPA2	HGNC
RFWD2	64326	genome.wustl.edu	37	1	175996812	175996812	+	Missense_Mutation	SNP	G	G	C			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	1	175996812	175996812	G	C	SNP	RFWD2	ENST00000367669	human	ensembl	70_37	-1	known	missense	c.1625	p.S542C	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_Znf_C3HC4_RING-type,superfamily_WD40_repeat_dom,smart_Znf_RING,smart_WD40_repeat,pfscan_Znf_RING,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	RFWD2	HGNC
RGS7BP	401190	genome.wustl.edu	37	5	63802466	63802466	+	Silent	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	5	63802466	63802466	G	A	SNP	RGS7BP	ENST00000334025	human	ensembl	70_37	+1	known	silent	c.15	p.P5	1.000	NULL	NULL	-	no_errors	RGS7BP	HGNC
RIMS1	22999	genome.wustl.edu	37	6	72984127	72984127	+	Silent	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	6	72984127	72984127	G	A	SNP	RIMS1	ENST00000521978	human	ensembl	70_37	+1	known	silent	c.3474	p.E1158	1.000	NULL	pfam_C2_Ca-dep,pfam_PDZ,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_Znf_FYVE_PHD,superfamily_PDZ,smart_PDZ,smart_C2_Ca-dep,pfscan_C2_membr_targeting,pfscan_PDZ,pfscan_Rab-bd_domain,pfscan_Znf_FYVE-rel	-	no_errors	RIMS1	HGNC
RPL23AP79	100271626	genome.wustl.edu	37	19	59110367	59110367	+	RNA	SNP	C	C	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	19	59110367	59110367	C	A	SNP	RPL23AP79	ENST00000473164	human	ensembl	70_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RPL23AP79	HGNC
RYR3	6263	genome.wustl.edu	37	15	34113779	34113779	+	Silent	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	15	34113779	34113779	C	T	SNP	RYR3	ENST00000389232	human	ensembl	70_37	+1	known	silent	c.10971	p.N3657	0.995	superfamily_ARM-type_fold	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_HAND_2,pfscan_MIR_motif	-	no_errors	RYR3	HGNC
SDHA	6389	genome.wustl.edu	37	5	226026	226026	+	Missense_Mutation	SNP	G	G	C			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	5	226026	226026	G	C	SNP	SDHA	ENST00000264932	human	ensembl	70_37	+1	known	missense	c.485	p.R162T	1.000	pfam_FAD_bind_dom,tigrfam_Succ_DH_flav_su_fwd,tigrfam_Succ_Dhase_FrdA_Gneg	pfam_FAD_bind_dom,pfam_Fum_Rdtase/Succ_DH_flav-like_C,superfamily_Fum_Rdtase/Succ_DH_flav-like_C,tigrfam_Succ_DH_flav_su_fwd,tigrfam_Succ_Dhase_FrdA_Gneg	-	no_errors	SDHA	HGNC
SETX	23064	genome.wustl.edu	37	9	135204702	135204702	+	Silent	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	9	135204702	135204702	C	T	SNP	SETX	ENST00000372169	human	ensembl	70_37	-1	known	silent	c.2283	p.S761	0.031	NULL	NULL	-	no_errors	SETX	HGNC
SLC17A6	57084	genome.wustl.edu	37	11	22363242	22363242	+	Silent	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	11	22363242	22363242	C	T	SNP	SLC17A6	ENST00000263160	human	ensembl	70_37	+1	known	silent	c.255	p.F85	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC17A6	HGNC
SLC25A3P1	163742	genome.wustl.edu	37	1	53904244	53904244	+	RNA	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	1	53904244	53904244	G	A	SNP	SLC25A3P1	ENST00000566100	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.762	-	-	-	no_errors	SLC25A3P1	HGNC
SNORD3B-2	780852	genome.wustl.edu	37	17	18967104	18967104	+	RNA	SNP	C	C	G			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	17	18967104	18967104	C	G	SNP	SNORD3B-2	ENST00000571722	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNORD3B-2	Clone_based_vega_gene
SPATA4	132851	genome.wustl.edu	37	4	177114225	177114225	+	Silent	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	4	177114225	177114225	G	A	SNP	SPATA4	ENST00000280191	human	ensembl	70_37	-1	known	silent	c.351	p.F117	1.000	pfam_DUF1042,pfam_CAMSAP_CH,superfamily_CH-domain	pfam_DUF1042,pfam_CAMSAP_CH,superfamily_CH-domain	-	no_errors	SPATA4	HGNC
STS	412	genome.wustl.edu	37	X	7252034	7252034	+	Missense_Mutation	SNP	G	G	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	X	7252034	7252034	G	T	SNP	STS	ENST00000217961	human	ensembl	70_37	+1	known	missense	c.1264	p.D422Y	0.998	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	-	no_errors	STS	HGNC
TARSL2	123283	genome.wustl.edu	37	15	102211717	102211717	+	Missense_Mutation	SNP	G	G	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	15	102211717	102211717	G	T	SNP	TARSL2	ENST00000335968	human	ensembl	70_37	-1	known	missense	c.1939	p.P647T	1.000	pfscan_aa-tRNA-synth_II,prints_Thr-tRNA-ligase_IIa,tigrfam_Thr-tRNA-ligase_IIa	pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Anticodon-bd,pfam_TGS,pfam_tRNA_SAD,superfamily_Thr/Ala-tRNA-synth_IIc_edit,superfamily_Anticodon-bd,superfamily_TGS-like,smart_tRNA_SAD,pfscan_aa-tRNA-synth_II,prints_Thr-tRNA-ligase_IIa,tigrfam_Thr-tRNA-ligase_IIa	-	no_errors	TARSL2	HGNC
TMEM87B	84910	genome.wustl.edu	37	2	112873753	112873753	+	RNA	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	2	112873753	112873753	G	A	SNP	TMEM87B	ENST00000471632	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TMEM87B	HGNC
TP53BP1	7158	genome.wustl.edu	37	15	43738643	43738643	+	Missense_Mutation	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	15	43738643	43738643	C	T	SNP	TP53BP1	ENST00000382044	human	ensembl	70_37	-1	known	missense	c.2982	p.M994I	1.000	NULL	pfam_53-BP1_Tudor,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	TP53BP1	HGNC
TRRAP	8295	genome.wustl.edu	37	7	98580932	98580932	+	Missense_Mutation	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	7	98580932	98580932	G	A	SNP	TRRAP	ENST00000359863	human	ensembl	70_37	+1	known	missense	c.8851	p.A2951T	1.000	pfam_PIK-rel_kinase_FAT,pfscan_PIK_FAT	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	TRRAP	HGNC
TTC3	7267	genome.wustl.edu	37	21	38523150	38523150	+	Missense_Mutation	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	21	38523150	38523150	C	T	SNP	TTC3	ENST00000354749	human	ensembl	70_37	+1	known	missense	c.2242	p.P748S	1.000	NULL	pfam_Znf_C3HC4_RING-type,superfamily_DEATH-like,smart_TPR_repeat,smart_Znf_RING,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RING	-	no_errors	TTC3	HGNC
USH1C	10083	genome.wustl.edu	37	11	17517199	17517199	+	Missense_Mutation	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	11	17517199	17517199	C	T	SNP	USH1C	ENST00000005226	human	ensembl	70_37	-1	known	missense	c.2572	p.E858K	0.096	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	USH1C	HGNC
USP6	9098	genome.wustl.edu	37	17	5045313	5045313	+	Missense_Mutation	SNP	G	G	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	17	5045313	5045313	G	T	SNP	USP6	ENST00000250066	human	ensembl	70_37	+1	known	missense	c.1589	p.G530V	1.000	pfam_Peptidase_C19	pfam_Peptidase_C19,pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom,pfscan_Peptidase_C19	-	no_errors	USP6	HGNC
VSIG2	23584	genome.wustl.edu	37	11	124618303	124618303	+	Silent	SNP	A	A	G			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	11	124618303	124618303	A	G	SNP	VSIG2	ENST00000326621	human	ensembl	70_37	-1	known	silent	c.834	p.Y278	0.982	NULL	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_errors	VSIG2	HGNC
WDR49	151790	genome.wustl.edu	37	3	167217980	167217980	+	Missense_Mutation	SNP	C	C	G			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	3	167217980	167217980	C	G	SNP	WDR49	ENST00000308378	human	ensembl	70_37	-1	known	missense	c.1936	p.E646Q	0.006	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR49	HGNC
ZFX	7543	genome.wustl.edu	37	X	24225503	24225503	+	Missense_Mutation	SNP	C	C	T			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	X	24225503	24225503	C	T	SNP	ZFX	ENST00000540034	human	ensembl	70_37	+1	known	missense	c.824	p.S275L	0.230	pfam_Transcrp_activ_Zfx/Zfy-dom	pfam_Transcrp_activ_Zfx/Zfy-dom,pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFX	HGNC
ZNF572	137209	genome.wustl.edu	37	8	125989129	125989129	+	Missense_Mutation	SNP	G	G	C			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	8	125989129	125989129	G	C	SNP	ZNF572	ENST00000319286	human	ensembl	70_37	+1	known	missense	c.619	p.E207Q	0.994	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF572	HGNC
ZNF608	57507	genome.wustl.edu	37	5	123972613	123972614	+	RNA	INS	-	-	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	5	123972613	123972614	-	A	INS	ZNF608	ENST00000513985	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.291:0.200	-	-	-	no_errors	ZNF608	HGNC
ZNF69	7620	genome.wustl.edu	37	19	12014480	12014480	+	Silent	SNP	G	G	C			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	19	12014480	12014480	G	C	SNP	ZNF69	ENST00000429654	human	ensembl	70_37	+1	known	silent	c.156	p.V52	0.992	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF69	HGNC
ZNF787	126208	genome.wustl.edu	37	19	56614301	56614301	+	Silent	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	19	56614301	56614301	G	A	SNP	ZNF787	ENST00000587279	human	ensembl	70_37	-1	putative	silent	c.286	p.L96	0.000	NULL	NULL	-	no_errors	ZNF787	HGNC
ZNF879	345462	genome.wustl.edu	37	5	178459886	178459886	+	Missense_Mutation	SNP	G	G	A			TCGA-IR-A3LF-01A-21D-A22X-09	TCGA-IR-A3LF-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	224b26b0-dced-4b5a-95c1-c5d4c2348b07	1a368b09-b49b-404a-bc41-aa49cdc7d8a7	5	178459886	178459886	G	A	SNP	ZNF879	ENST00000444149	human	ensembl	70_37	+1	known	missense	c.937	p.E313K	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF879	HGNC
