Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source
ABCA2	20	genome.wustl.edu	37	9	139908007	139908007	+	Missense_Mutation	SNP	G	G	A			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	9	139908007	139908007	G	A	SNP	ABCA2	ENST00000265662	human	ensembl	70_37	-1	known	missense	c.4456	p.P1486S	1.000	NULL	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA2	HGNC
ABCB4	5244	genome.wustl.edu	37	7	87082375	87082375	+	Missense_Mutation	SNP	C	C	T			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	7	87082375	87082375	C	T	SNP	ABCB4	ENST00000265723	human	ensembl	70_37	-1	known	missense	c.421	p.A141T	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC_transptrTM_dom_typ1,pfscan_ABC_transporter_type1	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,pfam_Zeta_toxin_domain,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1	-	no_errors	ABCB4	HGNC
AK5	26289	genome.wustl.edu	37	1	77763549	77763549	+	Silent	SNP	T	T	C			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	1	77763549	77763549	T	C	SNP	AK5	ENST00000354567	human	ensembl	70_37	+1	known	silent	c.616	p.L206	0.999	pfam_Adenylate_kin	pfam_Adenylate_kin,pfam_Dpy-30_motif,superfamily_cAMP_dep_PK_reg_su_I/II_a/b,prints_Adenylate_kin,tigrfam_Adenylate_kin1	-	no_errors	AK5	HGNC
ANGPT1	284	genome.wustl.edu	37	8	108297059	108297060	+	Frame_Shift_Ins	INS	-	-	GA			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	8	108297059	108297060	-	GA	INS	ANGPT1	ENST00000517746	human	ensembl	70_37	-1	known	frame_shift_ins	c.1056_1055	p.G353fs	0.742:0.996	pfam_Fibrinogen_a/b/g_C,superfamily_Fibrinogen_a/b/g_C,smart_Fibrinogen_a/b/g_C	pfam_Fibrinogen_a/b/g_C,superfamily_Fibrinogen_a/b/g_C,smart_Fibrinogen_a/b/g_C	-	no_errors	ANGPT1	HGNC
ANO7	50636	genome.wustl.edu	37	2	242149950	242149950	+	Missense_Mutation	SNP	T	T	A			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	2	242149950	242149950	T	A	SNP	ANO7	ENST00000274979	human	ensembl	70_37	+1	known	missense	c.1688	p.I563N	0.992	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO7	HGNC
ARL5B	221079	genome.wustl.edu	37	10	18961578	18961578	+	Missense_Mutation	SNP	G	G	T			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	10	18961578	18961578	G	T	SNP	ARL5B	ENST00000377275	human	ensembl	70_37	+1	known	missense	c.283	p.D95Y	1.000	pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,pfam_SRP_receptor_beta_su,pfam_MIRO-like,pfam_Gtr1_RagA,pfam_Gprotein_alpha_su,smart_Small_GTPase_SAR1,smart_Small_GTPase_ARF,prints_Small_GTPase_ARF/SAR,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,pfam_SRP_receptor_beta_su,pfam_MIRO-like,pfam_Gtr1_RagA,pfam_Gprotein_alpha_su,smart_Small_GTPase_SAR1,smart_Small_GTPase_ARF,prints_Small_GTPase_ARF/SAR,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	ARL5B	HGNC
ATP6V0A1	535	genome.wustl.edu	37	17	40618526	40618526	+	Splice_Site	SNP	G	G	C			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	17	40618526	40618526	G	C	SNP	ATP6V0A1	ENST00000264649	human	ensembl	70_37	+1	known	splice_site	c.196+1	e2+1	1.000	-	-	-	no_errors	ATP6V0A1	HGNC
B3GNTL1	146712	genome.wustl.edu	37	17	80972328	80972328	+	Splice_Site	SNP	A	A	T			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	17	80972328	80972328	A	T	SNP	B3GNTL1	ENST00000320865	human	ensembl	70_37	-1	known	splice_site	c.408+2	e5+2	0.093	-	-	-	no_errors	B3GNTL1	HGNC
BACH2	60468	genome.wustl.edu	37	6	90647929	90647929	+	Silent	SNP	C	C	T			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	6	90647929	90647929	C	T	SNP	BACH2	ENST00000257749	human	ensembl	70_37	-1	known	silent	c.1977	p.A659	0.024	pfam_bZIP,superfamily_Euk_TF_DNA-bd,smart_bZIP,pfscan_bZIP	pfam_BTB_POZ,pfam_bZIP,superfamily_BTB/POZ_fold,superfamily_Euk_TF_DNA-bd,smart_BTB/POZ-like,smart_bZIP,pfscan_BTB/POZ-like,pfscan_bZIP	-	no_errors	BACH2	HGNC
C11orf48	79081	genome.wustl.edu	37	11	62432618	62432618	+	Silent	SNP	G	G	A			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	11	62432618	62432618	G	A	SNP	C11orf48	ENST00000524958	human	ensembl	70_37	-1	putative	silent	c.24	p.I8	1.000	NULL	NULL	-	no_errors	C11orf48	HGNC
C14orf164	100507650	genome.wustl.edu	37	14	23733863	23733863	+	Missense_Mutation	SNP	C	C	T			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	14	23733863	23733863	C	T	SNP	C14orf164	ENST00000430154	human	ensembl	70_37	+1	known	missense	c.617	p.P206L	1.000	NULL	NULL	-	no_errors	C14orf164	HGNC
CAPN8	388743	genome.wustl.edu	37	1	223842102	223842102	+	Splice_Site	SNP	C	C	G			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	1	223842102	223842102	C	G	SNP	CAPN8	ENST00000366872	human	ensembl	70_37	-1	known	splice_site	c.238-1	e2-1	1.000	-	-	-	no_errors	CAPN8	HGNC
CDPF1	150383	genome.wustl.edu	37	22	46641057	46641057	+	Missense_Mutation	SNP	G	G	A			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	22	46641057	46641057	G	A	SNP	CDPF1	ENST00000314567	human	ensembl	70_37	-1	novel	missense	c.304	p.R102W	0.681	pfam_Cys-rich_DPF	pfam_Cys-rich_DPF,prints_Cys-rich_DPF	-	no_errors	CDPF1	HGNC
COL6A5	256076	genome.wustl.edu	37	3	130095298	130095298	+	Missense_Mutation	SNP	C	C	A			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	3	130095298	130095298	C	A	SNP	COL6A5	ENST00000265379	human	ensembl	70_37	+1	known	missense	c.286	p.H96N	0.999	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A5	HGNC
CTDSPL2	51496	genome.wustl.edu	37	15	44783040	44783040	+	Silent	SNP	A	A	G			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	15	44783040	44783040	A	G	SNP	CTDSPL2	ENST00000260327	human	ensembl	70_37	+1	known	silent	c.534	p.Q178	1.000	NULL	pfam_NIF,superfamily_HAD-like_dom,smart_NIF,pfscan_NIF,tigrfam_Dullard_phosphatase	-	no_errors	CTDSPL2	HGNC
CYP2A13	1553	genome.wustl.edu	37	19	41601815	41601815	+	Missense_Mutation	SNP	G	G	A			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	19	41601815	41601815	G	A	SNP	CYP2A13	ENST00000330436	human	ensembl	70_37	+1	known	missense	c.1454	p.R485Q	0.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2A-like,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV	-	no_errors	CYP2A13	HGNC
DMD	1756	genome.wustl.edu	37	X	32398677	32398677	+	Missense_Mutation	SNP	C	C	T			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	X	32398677	32398677	C	T	SNP	DMD	ENST00000357033	human	ensembl	70_37	-1	known	missense	c.4795	p.A1599T	0.953	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin,pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_Rsp5_WWP,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_Rsp5_WWP,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_Rsp5_WWP,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_Rsp5_WWP,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC
DNAH3	55567	genome.wustl.edu	37	16	21145629	21145629	+	Missense_Mutation	SNP	G	G	T			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	16	21145629	21145629	G	T	SNP	DNAH3	ENST00000261383	human	ensembl	70_37	-1	known	missense	c.1033	p.H345N	0.929	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_Prefoldin,smart_AAA+_ATPase	-	no_errors	DNAH3	HGNC
ENSG00000205830	0	genome.wustl.edu	37	4	27209653	27209654	+	RNA	DEL	GT	GT	-			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	GT	GT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	4	27209653	27209654	GT	-	DEL	ENSG00000205830	ENST00000382007	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	AC024132.1	Clone_based_vega_gene
ENSG00000260544	0	genome.wustl.edu	37	16	32141827	32141827	+	RNA	SNP	A	A	G			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	16	32141827	32141827	A	G	SNP	ENSG00000260544	ENST00000568083	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.110	-	-	-	no_errors	RP11-1166P10.9	Clone_based_vega_gene
FAM132A	388581	genome.wustl.edu	37	1	1177985	1177985	+	Silent	SNP	C	C	T			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	1	1177985	1177985	C	T	SNP	FAM132A	ENST00000330388	human	ensembl	70_37	-1	known	silent	c.852	p.G284	0.979	superfamily_Tumour_necrosis_fac-like	superfamily_Tumour_necrosis_fac-like	-	no_errors	FAM132A	HGNC
FAM73B	84895	genome.wustl.edu	37	9	131822885	131822885	+	Missense_Mutation	SNP	G	G	C			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	9	131822885	131822885	G	C	SNP	FAM73B	ENST00000358369	human	ensembl	70_37	+1	known	missense	c.850	p.E284Q	1.000	pfam_DUF2217	pfam_DUF2217	-	no_errors	FAM73B	HGNC
FCGBP	8857	genome.wustl.edu	37	19	40424127	40424127	+	Missense_Mutation	SNP	G	G	C			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	19	40424127	40424127	G	C	SNP	FCGBP	ENST00000221347	human	ensembl	70_37	-1	known	missense	c.2076	p.D692E	0.999	pfam_Unchr_dom_Cys-rich,smart_Unchr_dom_Cys-rich	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_Fol_N,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_VWF_C,smart_VWC_out	-	no_errors	FCGBP	HGNC
FFAR3	2865	genome.wustl.edu	37	19	35849932	35849932	+	Missense_Mutation	SNP	C	C	G			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	19	35849932	35849932	C	G	SNP	FFAR3	ENST00000327809	human	ensembl	70_37	+1	known	missense	c.140	p.P47R	0.395	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_GPR40-rel_recept	-	no_errors	FFAR3	HGNC
FLNA	2316	genome.wustl.edu	37	X	153589834	153589834	+	Missense_Mutation	SNP	G	G	A			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	X	153589834	153589834	G	A	SNP	FLNA	ENST00000369850	human	ensembl	70_37	-1	known	missense	c.3049	p.P1017S	1.000	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNA	HGNC
FREM3	166752	genome.wustl.edu	37	4	144498997	144498997	+	Missense_Mutation	SNP	C	C	A			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	4	144498997	144498997	C	A	SNP	FREM3	ENST00000329798	human	ensembl	70_37	-1	putative	missense	c.6187	p.D2063Y	1.000	pfam_Calx_beta,smart_Calx_beta	pfam_Calx_beta,superfamily_Cadherin-like,smart_Calx_beta	-	no_errors	FREM3	HGNC
FRG2B	441581	genome.wustl.edu	37	10	135438753	135438753	+	Silent	SNP	G	G	A			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	10	135438753	135438753	G	A	SNP	FRG2B	ENST00000443774	human	ensembl	70_37	-1	known	silent	c.690	p.T230	0.707	NULL	NULL	-	no_errors	FRG2B	HGNC
GRAMD1B	57476	genome.wustl.edu	37	11	123477438	123477438	+	Missense_Mutation	SNP	C	C	T			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	11	123477438	123477438	C	T	SNP	GRAMD1B	ENST00000322282	human	ensembl	70_37	+1	known	missense	c.1016	p.S339L	0.998	NULL	pfam_GRAM,smart_GRAM	-	no_errors	GRAMD1B	HGNC
GXYLT1	283464	genome.wustl.edu	37	12	42512938	42512938	+	Missense_Mutation	SNP	T	T	A			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	12	42512938	42512938	T	A	SNP	GXYLT1	ENST00000398675	human	ensembl	70_37	-1	known	missense	c.350	p.H117L	1.000	NULL	pfam_Glyco_trans_8	-	no_errors	GXYLT1	HGNC
IGFN1	91156	genome.wustl.edu	37	1	201184859	201184859	+	Missense_Mutation	SNP	C	C	T			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	1	201184859	201184859	C	T	SNP	IGFN1	ENST00000335211	human	ensembl	70_37	+1	known	missense	c.9188	p.T3063M	0.460	pfam_Ig_I-set,smart_Ig_sub	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	IGFN1	HGNC
IL26	55801	genome.wustl.edu	37	12	68619364	68619364	+	Splice_Site	SNP	A	A	G			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	12	68619364	68619364	A	G	SNP	IL26	ENST00000229134	human	ensembl	70_37	-1	known	splice_site	c.171+2	e1+2	1.000	-	-	-	no_errors	IL26	HGNC
IRAK2	3656	genome.wustl.edu	37	3	10219598	10219598	+	Silent	SNP	G	G	A			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	3	10219598	10219598	G	A	SNP	IRAK2	ENST00000256458	human	ensembl	70_37	+1	known	silent	c.171	p.T57	0.036	pfam_Death,superfamily_DEATH-like	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Death,superfamily_Kinase-like_dom,superfamily_DEATH-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	IRAK2	HGNC
KHK	3795	genome.wustl.edu	37	2	27322557	27322557	+	Missense_Mutation	SNP	G	G	C			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	2	27322557	27322557	G	C	SNP	KHK	ENST00000260598	human	ensembl	70_37	+1	known	missense	c.836	p.R279T	0.931	pfam_PfkB	pfam_PfkB	-	no_errors	KHK	HGNC
KIAA0101	9768	genome.wustl.edu	37	15	64669055	64669055	+	Missense_Mutation	SNP	G	G	T			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	15	64669055	64669055	G	T	SNP	KIAA0101	ENST00000560234	human	ensembl	70_37	-1	putative	missense	c.179	p.P60Q	0.990	NULL	NULL	-	no_errors	KIAA0101	HGNC
KIAA1683	80726	genome.wustl.edu	37	19	18378102	18378102	+	Missense_Mutation	SNP	C	C	T			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	19	18378102	18378102	C	T	SNP	KIAA1683	ENST00000392413	human	ensembl	70_37	-1	known	missense	c.248	p.R83Q	0.305	NULL	pfam_IQ_motif_EF-hand-BS,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	-	no_errors	KIAA1683	HGNC
KRTAP26-1	388818	genome.wustl.edu	37	21	31691800	31691800	+	Missense_Mutation	SNP	G	G	A			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	21	31691800	31691800	G	A	SNP	KRTAP26-1	ENST00000360542	human	ensembl	70_37	-1	known	missense	c.554	p.P185L	0.999	pfam_PMG	pfam_PMG	-	no_errors	KRTAP26-1	HGNC
LCORL	254251	genome.wustl.edu	37	4	17885634	17885634	+	Silent	SNP	T	T	A			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	4	17885634	17885634	T	A	SNP	LCORL	ENST00000382226	human	ensembl	70_37	-1	known	silent	c.1518	p.G506	0.979	NULL	pfam_HTH_Psq,superfamily_Homeodomain-like,pfscan_HTH_Psq	-	no_errors	LCORL	HGNC
LIPE	3991	genome.wustl.edu	37	19	42911508	42911508	+	Missense_Mutation	SNP	C	C	G			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	19	42911508	42911508	C	G	SNP	LIPE	ENST00000244289	human	ensembl	70_37	-1	known	missense	c.1955	p.G652A	0.994	pfam_AB_hydrolase_3,pfam_Steryl_acetyl_hydrolase	pfam_HSL_N,pfam_AB_hydrolase_3,pfam_Steryl_acetyl_hydrolase	-	no_errors	LIPE	HGNC
LOC642633	642633	genome.wustl.edu	37	22	21538436	21538436	+	RNA	SNP	A	A	G			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	22	21538436	21538436	A	G	SNP	LOC642633	ENST00000451257	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.017	-	-	-	no_errors	KB-1183D5.11	Clone_based_vega_gene
LOC84856	84856	genome.wustl.edu	37	10	42971108	42971108	+	RNA	SNP	T	T	C			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	10	42971108	42971108	T	C	SNP	LOC84856	ENST00000332123	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.017	-	-	-	no_errors	RP11-178A10.1	Clone_based_vega_gene
LRRC16A	55604	genome.wustl.edu	37	6	25479389	25479389	+	Missense_Mutation	SNP	C	C	G			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	6	25479389	25479389	C	G	SNP	LRRC16A	ENST00000377969	human	ensembl	70_37	+1	known	missense	c.445	p.L149V	0.003	NULL	NULL	-	no_errors	LRRC16A	HGNC
LSP1	4046	genome.wustl.edu	37	11	1902741	1902741	+	Missense_Mutation	SNP	C	C	T			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	11	1902741	1902741	C	T	SNP	LSP1	ENST00000311604	human	ensembl	70_37	+1	known	missense	c.271	p.R91W	0.473	prints_Lymphspecific	pfam_Caldesmon_LSP,prints_Lymphspecific	-	no_errors	LSP1	HGNC
MASP2	10747	genome.wustl.edu	37	1	11106635	11106635	+	Silent	SNP	G	G	A			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	1	11106635	11106635	G	A	SNP	MASP2	ENST00000400897	human	ensembl	70_37	-1	known	silent	c.390	p.F130	0.999	pfam_CUB,superfamily_CUB,smart_CUB,pfscan_CUB	pfam_Peptidase_S1_S6,pfam_CUB,pfam_Sushi_SCR_CCP,pfam_EGF-like_Ca-bd,superfamily_Pept_cys/ser_Trypsin-like,superfamily_CUB,superfamily_Complement_control_module,smart_CUB,smart_EGF-like_Ca-bd,smart_EG-like_dom,smart_Sushi_SCR_CCP,smart_Peptidase_S1_S6,pfscan_CUB,pfscan_Sushi_SCR_CCP,pfscan_Peptidase_S1_S6,prints_Peptidase_S1A	-	no_errors	MASP2	HGNC
MAST3	23031	genome.wustl.edu	37	19	18234034	18234034	+	Missense_Mutation	SNP	C	C	T			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	19	18234034	18234034	C	T	SNP	MAST3	ENST00000262811	human	ensembl	70_37	+1	known	missense	c.320	p.S107L	1.000	pfam_MA_Ser/Thr_Kinase_dom	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_cat_dom	-	no_errors	MAST3	HGNC
MSH2	4436	genome.wustl.edu	37	2	47639566	47639566	+	Missense_Mutation	SNP	G	G	T			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	2	47639566	47639566	G	T	SNP	MSH2	ENST00000233146	human	ensembl	70_37	+1	known	missense	c.659	p.G220V	1.000	pfam_DNA_mismatch_repair_MutS_connt,superfamily_DNA_mismatch_repair_MutS_connt,pirsf_DNA_mismatch_repair_MSH2	pfam_DNA_mismatch_repair_MutS_C,pfam_DNA_mismatch_repair_MutS_core,pfam_DNA_mismatch_repair_MutS_connt,pfam_DNA_mismatch_repair_MutS-lik_N,pfam_DNA_mismatch_repair_MutS_clamp,superfamily_DNA_mismatch_repair_MutS_core,superfamily_DNA_mismatch_repair_MutS_connt,smart_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_C,pirsf_DNA_mismatch_repair_MSH2	-	no_errors	MSH2	HGNC
NOP14	8602	genome.wustl.edu	37	4	2949269	2949269	+	Missense_Mutation	SNP	T	T	A			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	4	2949269	2949269	T	A	SNP	NOP14	ENST00000416614	human	ensembl	70_37	-1	known	missense	c.1483	p.I495F	0.348	pfam_Nop14	pfam_Nop14	-	no_errors	NOP14	HGNC
NPY5R	4889	genome.wustl.edu	37	4	164271435	164271435	+	Missense_Mutation	SNP	G	G	C			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	4	164271435	164271435	G	C	SNP	NPY5R	ENST00000338566	human	ensembl	70_37	+1	known	missense	c.10	p.E4Q	0.942	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_NPY5_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt	-	no_errors	NPY5R	HGNC
NTM	50863	genome.wustl.edu	37	11	132205130	132205130	+	RNA	SNP	A	A	T			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	11	132205130	132205130	A	T	SNP	NTM	ENST00000474900	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NTM	HGNC
OR51B4	79339	genome.wustl.edu	37	11	5322698	5322698	+	Missense_Mutation	SNP	A	A	G			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	11	5322698	5322698	A	G	SNP	OR51B4	ENST00000380224	human	ensembl	70_37	-1	known	missense	c.479	p.L160P	0.071	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51B4	HGNC
OR5D14	219436	genome.wustl.edu	37	11	55563486	55563486	+	Missense_Mutation	SNP	T	T	C			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	11	55563486	55563486	T	C	SNP	OR5D14	ENST00000335605	human	ensembl	70_37	+1	known	missense	c.455	p.L152P	0.020	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5D14	HGNC
OR5D16	390144	genome.wustl.edu	37	11	55606424	55606424	+	Missense_Mutation	SNP	A	A	C			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	11	55606424	55606424	A	C	SNP	OR5D16	ENST00000378396	human	ensembl	70_37	+1	known	missense	c.197	p.N66T	0.992	pfam_GPCR_Rhodpsn,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR5D16	HGNC
OR5D16	390144	genome.wustl.edu	37	11	55607128	55607128	+	Missense_Mutation	SNP	G	G	A			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	11	55607128	55607128	G	A	SNP	OR5D16	ENST00000378396	human	ensembl	70_37	+1	known	missense	c.901	p.D301N	0.001	NULL	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR5D16	HGNC
PAPLN	89932	genome.wustl.edu	37	14	73719422	73719422	+	Missense_Mutation	SNP	C	C	T			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	14	73719422	73719422	C	T	SNP	PAPLN	ENST00000427855	human	ensembl	70_37	+1	known	missense	c.1033	p.R345C	0.496	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Ig_I-set,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_Prot_inh_Kunz-m,pfam_PLAC,superfamily_Prot_inh_Kunz-m,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Prot_inh_Kunz-m,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Prot_inh_Kunz-m,pfscan_Ig-like,prints_Peptidase_M12B_ADAM-TS,prints_Prot_inh_Kunz-m	-	no_errors	PAPLN	HGNC
PASD1	139135	genome.wustl.edu	37	X	150840915	150840915	+	Silent	SNP	G	G	A			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	X	150840915	150840915	G	A	SNP	PASD1	ENST00000370357	human	ensembl	70_37	+1	known	silent	c.1698	p.Q566	0.000	NULL	smart_PAS,pfscan_PAS	-	no_errors	PASD1	HGNC
PASD1	139135	genome.wustl.edu	37	X	150840924	150840924	+	Silent	SNP	G	G	A			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	X	150840924	150840924	G	A	SNP	PASD1	ENST00000370357	human	ensembl	70_37	+1	known	silent	c.1707	p.E569	0.002	NULL	smart_PAS,pfscan_PAS	-	no_errors	PASD1	HGNC
PCDHA8	56140	genome.wustl.edu	37	5	140222840	140222840	+	Missense_Mutation	SNP	A	A	C			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	5	140222840	140222840	A	C	SNP	PCDHA8	ENST00000531613	human	ensembl	70_37	+1	known	missense	c.1934	p.H645P	0.971	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHA8	HGNC
PDE1B	5153	genome.wustl.edu	37	12	54968932	54968932	+	Missense_Mutation	SNP	G	G	A			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	12	54968932	54968932	G	A	SNP	PDE1B	ENST00000243052	human	ensembl	70_37	+1	known	missense	c.1115	p.S372N	1.000	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	pfam_PDEase_catalytic_dom,pfam_PDEase_N,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE1B	HGNC
PRR12	57479	genome.wustl.edu	37	19	50119035	50119035	+	Missense_Mutation	SNP	G	G	T			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	19	50119035	50119035	G	T	SNP	PRR12	ENST00000418929	human	ensembl	70_37	+1	novel	missense	c.5056	p.A1686S	0.003	NULL	NULL	-	no_errors	PRR12	HGNC
RAD51AP1	10635	genome.wustl.edu	37	12	4657294	4657294	+	Missense_Mutation	SNP	T	T	C			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	12	4657294	4657294	T	C	SNP	RAD51AP1	ENST00000228843	human	ensembl	70_37	+1	known	missense	c.407	p.M136T	0.000	NULL	NULL	-	no_errors	RAD51AP1	HGNC
SAA1	6288	genome.wustl.edu	37	11	18290819	18290819	+	Missense_Mutation	SNP	C	C	T			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	11	18290819	18290819	C	T	SNP	SAA1	ENST00000356524	human	ensembl	70_37	+1	known	missense	c.169	p.R57W	0.999	pfam_Serum_amyloid_A,smart_Serum_amyloid_A,pirsf_Serum_amyloid_A,prints_Serum_amyloid_A	pfam_Serum_amyloid_A,smart_Serum_amyloid_A,pirsf_Serum_amyloid_A,prints_Serum_amyloid_A	-	no_errors	SAA1	HGNC
SAA2	6289	genome.wustl.edu	37	11	18267518	18267518	+	Missense_Mutation	SNP	G	G	A			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	11	18267518	18267518	G	A	SNP	SAA2	ENST00000256733	human	ensembl	70_37	-1	known	missense	c.169	p.R57W	0.987	pfam_Serum_amyloid_A,smart_Serum_amyloid_A,pirsf_Serum_amyloid_A,prints_Serum_amyloid_A	pfam_Serum_amyloid_A,smart_Serum_amyloid_A,pirsf_Serum_amyloid_A,prints_Serum_amyloid_A	-	no_errors	SAA2	HGNC
SAGE1	55511	genome.wustl.edu	37	X	134994496	134994496	+	Missense_Mutation	SNP	C	C	G			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	X	134994496	134994496	C	G	SNP	SAGE1	ENST00000324447	human	ensembl	70_37	+1	known	missense	c.2538	p.F846L	0.818	NULL	NULL	-	no_errors	SAGE1	HGNC
SEC22B	9554	genome.wustl.edu	37	1	145116147	145116148	+	RNA	INS	-	-	A			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	1	145116147	145116148	-	A	INS	SEC22B	ENST00000453618	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.382:0.029	-	-	-	no_errors	SEC22B	HGNC
SNAPC4	6621	genome.wustl.edu	37	9	139272788	139272788	+	Missense_Mutation	SNP	G	G	A			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	9	139272788	139272788	G	A	SNP	SNAPC4	ENST00000298532	human	ensembl	70_37	-1	known	missense	c.3491	p.P1164L	0.000	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	SNAPC4	HGNC
STAR	6770	genome.wustl.edu	37	8	38003905	38003905	+	Missense_Mutation	SNP	C	C	G			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	8	38003905	38003905	C	G	SNP	STAR	ENST00000276449	human	ensembl	70_37	-1	known	missense	c.367	p.E123Q	1.000	pfam_START_lipid-bd,smart_START_lipid-bd,pfscan_START_lipid-bd	pfam_START_lipid-bd,smart_START_lipid-bd,pfscan_START_lipid-bd,prints_StAR	-	no_errors	STAR	HGNC
STAT1	6772	genome.wustl.edu	37	2	191841666	191841666	+	Silent	SNP	G	G	A			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	2	191841666	191841666	G	A	SNP	STAT1	ENST00000361099	human	ensembl	70_37	-1	known	silent	c.1959	p.V653	1.000	pfscan_SH2	pfam_STAT_TF_DNA-bd,pfam_STAT_TF_alpha,pfam_STAT_TF_prot_interaction,pfam_STAT1_TAZ2-bd_C,pfam_SH2,superfamily_p53-like_TF_DNA-bd,superfamily_STAT_TF_coiled-coil,superfamily_STAT_TF_prot_interaction,smart_STAT_TF_prot_interaction,pfscan_SH2	-	no_errors	STAT1	HGNC
TAF15	8148	genome.wustl.edu	37	17	34169419	34169419	+	Missense_Mutation	SNP	G	G	T			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	17	34169419	34169419	G	T	SNP	TAF15	ENST00000588240	human	ensembl	70_37	+1	known	missense	c.962	p.R321I	1.000	NULL	pfam_RRM_dom,pfam_Znf_RanBP2,smart_RRM_dom,smart_Znf_RanBP2,pfscan_Znf_RanBP2,pfscan_RRM_dom	-	no_errors	TAF15	HGNC
TBL3	10607	genome.wustl.edu	37	16	2027624	2027624	+	Missense_Mutation	SNP	G	G	C			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	16	2027624	2027624	G	C	SNP	TBL3	ENST00000568546	human	ensembl	70_37	+1	known	missense	c.1852	p.D618H	0.696	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_SSU_processome_Utp13,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	TBL3	HGNC
TBRG1	84897	genome.wustl.edu	37	11	124496383	124496383	+	Missense_Mutation	SNP	T	T	C			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	11	124496383	124496383	T	C	SNP	TBRG1	ENST00000441174	human	ensembl	70_37	+1	known	missense	c.469	p.C157R	1.000	NULL	pfam_FYrich_N,pfam_FYrich_C,smart_FYrich_N,smart_FYrich_C	-	no_errors	TBRG1	HGNC
TEKT5	146279	genome.wustl.edu	37	16	10721427	10721427	+	RNA	SNP	G	G	A			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	16	10721427	10721427	G	A	SNP	TEKT5	ENST00000574923	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	TEKT5	HGNC
TG	7038	genome.wustl.edu	37	8	133885442	133885442	+	Missense_Mutation	SNP	T	T	C			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	8	133885442	133885442	T	C	SNP	TG	ENST00000220616	human	ensembl	70_37	+1	known	missense	c.614	p.F205S	0.414	superfamily_Thyroglobulin_1,pirsf_Thyroglobulin,pfscan_Thyroglobulin_1	pfam_Thyroglobulin_1,pfam_CarbesteraseB,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pirsf_Thyroglobulin,pfscan_Thyroglobulin_1	-	no_errors	TG	HGNC
TMEM175	84286	genome.wustl.edu	37	4	947120	947120	+	Missense_Mutation	SNP	T	T	G			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	4	947120	947120	T	G	SNP	TMEM175	ENST00000264771	human	ensembl	70_37	+1	known	missense	c.605	p.F202C	1.000	NULL	pfam_DUF1211_TMEM175	-	no_errors	TMEM175	HGNC
TRPM2	7226	genome.wustl.edu	37	21	45826479	45826479	+	Missense_Mutation	SNP	G	G	A			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	21	45826479	45826479	G	A	SNP	TRPM2	ENST00000300482	human	ensembl	70_37	+1	known	missense	c.2793	p.M931I	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,superfamily_NUDIX_hydrolase_dom-like	-	no_errors	TRPM2	HGNC
TSHZ2	128553	genome.wustl.edu	37	20	51870650	51870650	+	Missense_Mutation	SNP	G	G	A			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	20	51870650	51870650	G	A	SNP	TSHZ2	ENST00000371497	human	ensembl	70_37	+1	known	missense	c.653	p.R218Q	0.998	smart_Znf_C2H2-like	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeodomain,pfscan_Znf_C2H2	-	no_errors	TSHZ2	HGNC
TTF2	8458	genome.wustl.edu	37	1	117617918	117617918	+	Missense_Mutation	SNP	G	G	A			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	1	117617918	117617918	G	A	SNP	TTF2	ENST00000369466	human	ensembl	70_37	+1	known	missense	c.712	p.E238K	0.000	NULL	pfam_SNF2_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_Znf_GRF,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	TTF2	HGNC
TTN-AS1	100506866	genome.wustl.edu	37	2	179463400	179463400	+	RNA	SNP	C	C	T			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	2	179463400	179463400	C	T	SNP	TTN-AS1	ENST00000419746	human	ensembl	70_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TTN-AS1	HGNC
XKR4	114786	genome.wustl.edu	37	8	56436066	56436066	+	Silent	SNP	C	C	A			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	8	56436066	56436066	C	A	SNP	XKR4	ENST00000327381	human	ensembl	70_37	+1	known	silent	c.1233	p.I411	1.000	pfam_Transport_prot_XK	pfam_Transport_prot_XK	-	no_errors	XKR4	HGNC
ZC3H11A	9877	genome.wustl.edu	37	1	203798606	203798606	+	Missense_Mutation	SNP	C	C	T			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	1	203798606	203798606	C	T	SNP	ZC3H11A	ENST00000332127	human	ensembl	70_37	+1	known	missense	c.326	p.P109L	0.995	NULL	smart_Znf_CCCH	-	no_errors	ZC3H11A	HGNC
ZNF767	79970	genome.wustl.edu	37	7	149318527	149318527	+	RNA	SNP	C	C	T			TCGA-JX-A3Q8-01A-11D-A21Q-09	TCGA-JX-A3Q8-10A-01D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8492e084-f9e1-4bad-9143-ab05dca4dc2d	4fe4de09-aaf1-4b8b-8708-e41c19c23cac	7	149318527	149318527	C	T	SNP	ZNF767	ENST00000463567	human	ensembl	70_37	-1	known	rna	NULL	NULL	0.899	-	-	-	no_errors	ZNF767	HGNC
