Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	ref_context	gc_content	t_alt_count	t_ref_count
HBE1	3046	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	5291062	5291062	+	Missense_Mutation	SNP	T	T	C			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	CTCTTCCACATTCATCTTGCT	0.507	19	23
TSPAN18	90139	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	44948236	44948236	+	Silent	SNP	G	G	C	rs149091051	byFrequency	TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	GCTGTTACACGGTGATCCTCA	0.587	68	107
P2RY2	5029	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	72945405	72945405	+	Silent	SNP	G	G	A			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	CCTGGAATGCGTCCACCACAT	0.612	19	40
DYNC2H1	79659	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	102984404	102984404	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	TTACCAAGCAGTACGGCAAGT	0.328	23	39
PDZD3	79849	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	119059739	119059739	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	TCAGCTGCCCGGGCTGGGCTG	0.607	51	72
SP7	121340	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	53722415	53722415	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	TTAGGGCAGTCGCAGGAGGAG	0.662	14	14
ATXN2	6311	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	111908030	111908030	+	Silent	SNP	A	A	G			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	TTACAGGACTATAGACATGAG	0.418	33	57
SYT16	83851	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	14	62547859	62547859	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	TGTGCTGTCCGCTTCCGCCTG	0.572	15	19
SYT16	83851	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	14	62567163	62567163	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	GAGATGTCCCGTTGCAAGACG	0.458	13	17
AHNAK2	113146	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	14	105420969	105420969	+	Silent	SNP	C	C	T			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	TCTGGGGTCCCGGCCCCCGCT	0.592	9	9
CREBBP	1387	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	3781317	3781317	+	Missense_Mutation	SNP	C	C	G			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	CCACTTGGAGCGGCGCAAGGA	0.642	13	7
SPPL2C	162540	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	43922344	43922344	+	Silent	SNP	C	C	T			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	GGGGAAAGTACGGCGTGGCCC	0.622	20	24
TYK2	7297	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	10465220	10465220	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	TTCAAATAGCGCTTGTGGAAA	0.577	17	51
PSMC4	5704	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	40480518	40480518	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	CTCCCGCTCACGCATTTCGAG	0.627	7	47
FBXO46	23403	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	46216180	46216180	+	Nonsense_Mutation	SNP	G	G	A			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	GTGGTCGGTCGTGGGTAGCTC	0.697	7	9
KLK6	5653	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	51466622	51466622	+	Silent	SNP	C	C	T			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	AGTCCCTCTCCAGGGGAAGGG	0.617	10	22
MYOM3	127294	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	24387556	24387556	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	TTACTCTTCTCGATGATGGCC	0.488	14	40
TPTE	7179	hgsc.bcm.edu;broad.mit.edu	37	21	10920147	10920147	+	Missense_Mutation	SNP	A	A	T			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	GCCTTTCTCCAAAATAATACA	0.383	22	104
TPO	7173	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	1459909	1459909	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	GATGATGACCGCTATTCTGAC	0.537	25	24
ITGA4	3676	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	182396426	182396426	+	Missense_Mutation	SNP	A	A	G			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	TTTCTTGTGTAATTTTGGGAA	0.323	33	50
GIGYF2	26058	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	233674460	233674460	+	Nonsense_Mutation	SNP	C	C	T			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	ACTGACCAGGCAGCAAGAACT	0.433	18	57
ASB1	51665	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	239344637	239344637	+	Silent	SNP	C	C	A			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	GGGCAGACATCCTGAAGGCCC	0.567	7	8
FGD5	152273	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	3	14862336	14862336	+	Silent	SNP	G	G	A			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	TCTCTCTGTCGTGTGTAATTG	0.557	19	25
WDR6	11180	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	3	49049692	49049692	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	GGCGACCTGCGAGTGCCTGGG	0.552	48	69
HEG1	57493	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	3	124692589	124692589	+	Missense_Mutation	SNP	C	C	A			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	TAGTACACATCCGTCATCTGG	0.463	15	29
PIK3CA	5290	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	3	178917478	178917478	+	Splice_Site	SNP	G	G	A			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	TTTATTAAAGGTTTTGCTATC	0.338	23	62
RNF150	57484	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	141888953	141888953	+	Missense_Mutation	SNP	T	T	C			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	GTCACGGTGATGTTTCTTTCC	0.488	28	141
MND1	84057	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	154335914	154335914	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	TAACATATTCGCAATAAAATC	0.249	15	26
TRIML1	339976	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	189068521	189068521	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	GAACAGCCACGTCTGAGGGGC	0.542	31	32
ADAMTS16	170690	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	5237184	5237184	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	GAGGATAGCCGTAATGTTTGT	0.403	42	61
CDH6	1004	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	31323148	31323148	+	Silent	SNP	G	G	T			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	TACCCCGACGGACTCCAACAG	0.522	16	28
HCN1	348980	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	45267295	45267295	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	TGAGTAAAGACGACAATATGT	0.433	48	80
HSPB3	8988	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	53751847	53751847	+	Silent	SNP	C	C	T			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	TCCTGCTGGACGTGGTCCAGT	0.547	22	43
OPN5	221391	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	6	47754301	47754301	+	Nonsense_Mutation	SNP	C	C	T			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	GTCTTCTAGACGAAAGAAGAA	0.378	41	33
SLC35D3	340146	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	6	137245387	137245387	+	Silent	SNP	G	G	T			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	CCACCATCACGGTGGGCATGG	0.592	21	3
SLC35D3	340146	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	6	137245388	137245388	+	Missense_Mutation	SNP	G	G	T			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	CACCATCACGGTGGGCATGGT	0.592	21	3
ABCB1	5243	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	87178715	87178715	+	Silent	SNP	C	C	T	rs56871767		TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	CCAAGGCTGACGTGGCCTCAT	0.537	28	54
DOCK5	80005	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	25216578	25216578	+	Splice_Site	SNP	G	G	A			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	AGACATCATCGTAAGTTGCCT	0.458	60	81
RIMS2	9699	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	104898359	104898359	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	CGCCAGATTTCGTTGAGCAGT	0.428	27	37
TYRP1	7306	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	12708029	12708029	+	Missense_Mutation	SNP	A	A	G			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	AAATGCCCCTATTGGACATAA	0.348	16	1
ZNF484	83744	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	95610417	95610417	+	Missense_Mutation	SNP	T	T	C			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	GTCACTTCTGTATGAGAATTC	0.353	28	89
LPPR1	54886	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	104086328	104086328	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	GTCCATGACCGAAGTTACCTG	0.418	15	29
SLC46A2	57864	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	115648895	115648895	+	Splice_Site	SNP	T	T	G			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	CGAACACCTTTCCTGTGGAAG	0.542	21	42
PLP1	5354	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	103043374	103043374	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	AGGTGTTCTCCCATGGAATGC	0.478	146	218
MAGEA6	4105	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	151870194	151870194	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	AAGATCAGTGGAGGACCTCGC	0.567	76	107
SI	6476	broad.mit.edu;ucsc.edu	37	3	164741401	164741401	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	CACCTCCACACGAAGAGTTGA	0.388	28	59
GUCY2F	2986	broad.mit.edu;ucsc.edu	37	X	108719025	108719025	+	Missense_Mutation	SNP	C	C	A			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	GTGTCCACACCTGCTGCGGAA	0.567	30	50
ZNF624	57547	broad.mit.edu;ucsc.edu	37	17	16527452	16527452	+	Nonsense_Mutation	SNP	C	C	A			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	CCTTTCATCTCCTTGCAAATT	0.373	70	78
GPR110	266977	broad.mit.edu;ucsc.edu	37	6	46996743	46996743	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	AGGAAGCCACCGTGGCCGTCA	0.512	20	27
GRXCR2	643226	broad.mit.edu;ucsc.edu	37	5	145252495	145252495	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	GGTTTGCCATCACTCTTCTGA	0.507	49	78
SGCD	6444	broad.mit.edu;ucsc.edu	37	5	155771587	155771587	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	TATGGCTGGCGGAAACGATGC	0.483	36	40
OLFML2B	25903	broad.mit.edu;ucsc.edu	37	1	161967984	161967984	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	GACCAGGGTGCGGTCCGAGCG	0.627	70	102
KRT39	390792	broad.mit.edu;ucsc.edu	37	17	39122910	39122910	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	ATGGGCTTGCGACAAAAGCGA	0.517	82	115
RIBC2	26150	broad.mit.edu;ucsc.edu	37	22	45821982	45821982	+	Missense_Mutation	SNP	G	G	A	rs149130910	byFrequency	TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	GTCCCTGACCGCTGGAAGGGC	0.642	6	12
OTUD3	23252	broad.mit.edu;hgsc.bcm.edu	37	1	20216922	20216923	+	Frame_Shift_Ins	INS	-	-	A			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	GAGGGACACTCACGAAATCATC	0.416	86	49
HSPD1	3329	broad.mit.edu;hgsc.bcm.edu	37	2	198353171	198353174	+	Frame_Shift_Del	DEL	TCTG	TCTG	-			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	CATCTGTAACTCTGTCTTTCTTTT	0.441	57	86
PHTF2	57157	broad.mit.edu;hgsc.bcm.edu	37	7	77569563	77569564	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	GGTTCGCGTGTCTCTTGTGTGG	0.342	47	170
OR5D14	219436	broad.mit.edu;hgsc.bcm.edu	37	11	55563460	55563461	+	Frame_Shift_Ins	INS	-	-	G			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	AGAGGCTCTGTGCCCTGCTGGT	0.51	48	55
SCML2	10389	broad.mit.edu;hgsc.bcm.edu	37	X	18259468	18259469	+	Frame_Shift_Del	DEL	TT	TT	-			TCGA-DU-6405-01A-11D-1705-08	TCGA-DU-6405-10A-01D-1705-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c810082c-26de-4168-84e7-512a6a9aea65	1057ab5b-17d9-439b-8c97-c7a81ffc89c5	CACATCACTCTTGAGTAGGAAC	0.342	79	114
