Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	ref_context	gc_content	t_alt_count	t_ref_count
IL2RA	3559	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	10	6061422	6061422	+	Silent	SNP	C	C	T			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	TAAATATGGACGTCTCCATGG	0.468	35	92
SUPV3L1	6832	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	10	70940084	70940084	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	GGCTCGGCTCCCGGCGGGGCG	0.687	16	80
TRUB1	142940	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	10	116710901	116710901	+	Missense_Mutation	SNP	G	G	T	rs139774976		TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	ATGTTGTCAGGGTCCAAGGTA	0.299	19	102
TEAD1	7003	hgsc.bcm.edu;broad.mit.edu	37	11	12886385	12886385	+	Splice_Site	SNP	G	G	A			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	TACCCTGCAGGTGTCTAGTCA	0.478	9	112
CHST1	8534	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	45672219	45672219	+	Silent	SNP	G	G	A			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	GGTAGAAGACGTCCAGGTGCT	0.642	22	108
ATG2A	23130	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	64684532	64684532	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	AAGAAGTGACCTAAGTAGTGG	0.597	10	81
SLCO1B3	28234	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	21030809	21030809	+	Silent	SNP	C	C	T	rs145036538		TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	CTTTTACTTACGTCTTTAAAT	0.338	13	54
NFYB	4801	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	104517157	104517157	+	Silent	SNP	C	C	T			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	AACTGATGAACTCACTTACAC	0.343	18	21
TP53	7157	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	7574034	7574034	+	Splice_Site	SNP	C	C	G			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	GCCCACGGATCTGCAGCAACA	0.512	30	8
MYH8	4626	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	10304026	10304026	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	GAGGTCAGAGCGCTGCTTCTC	0.572	24	131
EVI2B	2124	hgsc.bcm.edu;broad.mit.edu	37	17	29632058	29632058	+	Missense_Mutation	SNP	A	A	C	rs142498190		TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	TTTGTTTGTTACTGGTAGTAT	0.338	12	143
FBN3	84467	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	8201077	8201077	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	GCCGTACCCACGCATGCCTGC	0.667	11	97
MUC16	94025	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	9046871	9046871	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	CCCAGAAACCGTTGTGCTGGT	0.522	15	57
PRR19	284338	hgsc.bcm.edu;broad.mit.edu	37	19	42814703	42814703	+	Silent	SNP	G	G	A			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	TGGTAGCCACGCCACCCCCTC	0.627	11	174
GPR4	2828	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	46094975	46094975	+	Silent	SNP	G	G	A			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	CGCCCAGCTCGTTGCGCTGTT	0.617	17	121
CPT1C	126129	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	50203968	50203968	+	Silent	SNP	G	G	A	rs141969670		TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	GGCTCCGGGGGGTCCTGGCAG	0.662	20	213
NLRP2	55655	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	55501464	55501464	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	CAGTCCCTGACGTGCGTAAAC	0.517	46	54
NOC2L	26155	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	883983	883983	+	Splice_Site	SNP	T	T	C			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	TGCTGGAACATCTGCCCCAAG	0.622	17	22
PBXIP1	57326	hgsc.bcm.edu;broad.mit.edu	37	1	154918277	154918277	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	CAGGGCAGCCGTGCCAAGTAT	0.617	10	104
RASSF5	83593	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	206711607	206711607	+	Silent	SNP	C	C	T	rs138095666		TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	GCACCCTCACCGTGACCTTCA	0.592	72	115
SGK2	10110	hgsc.bcm.edu;broad.mit.edu	37	20	42204987	42204987	+	Missense_Mutation	SNP	C	C	G			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	CCACAAGGACCAGAGGCAGCG	0.607	6	104
DDX27	55661	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	20	47835985	47835985	+	Missense_Mutation	SNP	C	C	G			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	TCTGCGACAACATGCTTGCGG	0.602	20	25
MGAT3	4248	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	22	39884655	39884655	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	GCTCGTGTCCGCCCAGAATGG	0.662	25	44
ARID5A	10865	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	97217809	97217809	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	ACTGGCACCCCGGGCCCCTTG	0.721	46	66
TTN	7273	hgsc.bcm.edu;broad.mit.edu	37	2	179517223	179517223	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	AGGAGGAGCCGCTGGCACTTT	0.378	12	194
IDH1	3417	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	209113112	209113112	+	Missense_Mutation	SNP	C	C	T	rs121913500		TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	ATAAGCATGACGACCTATGAT	0.393	32	33
NEU4	129807	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	242755717	242755717	+	Silent	SNP	C	C	T			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	GGACAGTGCTCTTCGAGCGGG	0.697	10	49
ACPP	55	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	3	132051153	132051153	+	Missense_Mutation	SNP	A	A	G			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	CTGGCAGCCCATCCCGGTGCA	0.507	42	60
NCK1	4690	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	3	136646967	136646967	+	Nonsense_Mutation	SNP	C	C	T			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	GTGGCGAGTTCGAAATTCCAT	0.393	15	105
MUC7	4589	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	71347104	71347104	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	CACAGCTGCCCCACCCACACC	0.597	105	71
ANKRD17	26057	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	74021734	74021734	+	Splice_Site	SNP	A	A	G			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	GATAATACGAACCTGTGCAAG	0.353	27	55
PHF17	79960	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	129792755	129792755	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	TAGAAGGGAGGGGATGGTGGT	0.498	15	72
DNAH5	1767	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	13867993	13867993	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	TTCTGGACTTCGCCAGCACGT	0.453	21	86
NLN	57486	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	65118664	65118664	+	Missense_Mutation	SNP	T	T	C	rs149642804	by1000genomes	TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	CTGGACGGCATGGACATGCTC	0.433	74	67
HSPA9	3313	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	137906680	137906680	+	Nonsense_Mutation	SNP	G	G	A	rs35091799		TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	TCATCATATCGCCGGCCAATG	0.463	19	150
RNF8	9025	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	6	37339288	37339288	+	Splice_Site	SNP	G	G	T			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	GGCTTTGCAGGGTTTGGAGAT	0.468	8	66
LMOD2	442721	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	123302314	123302314	+	Missense_Mutation	SNP	C	C	A			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	GAGAACATCACAACACAGACC	0.488	11	85
EPPK1	83481	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	144940844	144940844	+	Missense_Mutation	SNP	G	G	A			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	CATTTCCTCCGTGATTATGGC	0.552	103	337
SVEP1	79987	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	113170752	113170752	+	Silent	SNP	A	A	G			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	GAACAATCTTACAAACAGGGA	0.453	6	40
SYTL4	94121	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	99956505	99956505	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	TTCCTGTATGCGGCAGTCCCG	0.582	70	111
IL1RAPL2	26280	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	104984622	104984622	+	Missense_Mutation	SNP	A	A	G			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	CTGGCGAATTATACCTGCCAT	0.393	34	40
BRS3	680	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	135572458	135572458	+	Nonsense_Mutation	SNP	G	G	T			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	TATGACATTTGAATCATGTAC	0.373	6	53
RENBP	5973	hgsc.bcm.edu;broad.mit.edu	37	X	153208402	153208402	+	Missense_Mutation	SNP	G	G	T	rs149476338		TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	TGCTCCACCAGGTTCAGTAGC	0.701	14	177
CCDC8	83987	broad.mit.edu;ucsc.edu	37	19	46915402	46915402	+	Silent	SNP	G	G	A			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	GCCGGGCCTCGCCCACCCCGG	0.701	8	34
ACCS	84680	broad.mit.edu;ucsc.edu	37	11	44089249	44089249	+	Silent	SNP	G	G	T			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	TGCAGGACCTGGGCAGTAGCC	0.567	19	71
TENM3	55714	broad.mit.edu;ucsc.edu	37	4	183651451	183651451	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	TATGGATATACTATTACCCGC	0.418	23	51
DMD	1756	broad.mit.edu;ucsc.edu	37	X	32867885	32867885	+	Missense_Mutation	SNP	C	C	T			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	GTCTAGGAGGCGCCTCCCATC	0.393	9	70
ATRX	546	broad.mit.edu;hgsc.bcm.edu	37	X	76937833	76937836	+	Frame_Shift_Del	DEL	TCTT	TCTT	-			TCGA-DU-A5TW-01A-11D-A289-08	TCGA-DU-A5TW-10A-01D-A289-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c9e20be0-18f4-4677-9605-7f5a9e048aae	f42bbddc-fce4-44a1-9cb5-a4d5d2f84693	ATCGCTCTGGTCTTTCTTTAGGAA	0.324	90	135
