Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	ref_context	gc_content	t_alt_count	t_ref_count
RET	5979	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	10	43622043	43622043	+	Silent	SNP	G	G	A			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	ACCTTGCGGCGTCCACTCCAT	0.552	220	302
OR4A47	403253	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	48511063	48511063	+	Missense_Mutation	SNP	C	C	A			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	ACCTGCAGTTCCCACATGACT	0.413	14	145
SLC5A8	160728	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	101573832	101573832	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	CATAAGTGACGCCAGCGCAGC	0.443	79	217
SRRM4	84530	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	119583235	119583235	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	ACAGCCAGCCCGCTCACCACC	0.612	4	10
ZC3H14	79882	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	14	89044394	89044394	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	ATTGCTAGCAGAAGTGGTCCA	0.388	46	71
AHNAK2	113146	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	14	105409805	105409805	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	ACCTTTGGCGCGGTCACATCC	0.612	133	225
CCDC135	84229	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	57732824	57732824	+	Missense_Mutation	SNP	C	C	G			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	ACCAACACACCCAAGGAGGAA	0.577	43	244
CIC	23152	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	42795390	42795390	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	GGGAATCACCCAGGTACAGTA	0.692	4	18
PPFIA3	8541	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	49651494	49651494	+	Missense_Mutation	SNP	A	A	G			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	GGCCAACTCAAGATGGTGGAC	0.582	24	19
PAFAH2	5051	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	26311003	26311003	+	Missense_Mutation	SNP	A	A	G			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	TCCATGCAGAAGGCTGAATAC	0.522	23	7
LRRC41	10489	hgsc.bcm.edu;ucsc.edu	37	1	46752135	46752135	+	Missense_Mutation	SNP	A	A	G			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	TGGGAAAAAAAGGCCTCCATA	0.488	4	39
ELTD1	64123	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	79470843	79470843	+	Silent	SNP	G	G	C			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	TTGCATTTGGGAGACAAGGTG	0.343	55	18
SLC44A3	126969	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	95307657	95307657	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	GCTGGGGTTTGCTATCGTATC	0.448	12	88
FCRL5	83416	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	157516858	157516858	+	Missense_Mutation	SNP	T	T	C			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	TTTCCCAAGGTACCGATGGTA	0.502	32	77
SOAT1	6646	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	179316745	179316745	+	Missense_Mutation	SNP	T	T	G			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	GTGTGCTGATTCTCTTCCTTA	0.348	7	78
LYST	1130	hgsc.bcm.edu;ucsc.edu	37	1	235940414	235940414	+	Silent	SNP	G	G	T			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	CGTGCAGAATGCCTTGAATAG	0.358	25	70
RYR2	6262	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	237666709	237666709	+	Missense_Mutation	SNP	G	G	T			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	ACAGCCGAGAGTACAAGCAAG	0.507	19	79
STMN3	50861	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	20	62273610	62273610	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	CGCTCGTGCTCGCGCCGCTCC	0.692	10	32
MX2	4600	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	21	42749752	42749752	+	Nonsense_Mutation	SNP	A	A	T			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	GTACGAGCAGAAGGTGCGCCC	0.627	34	100
ATRAID	51374	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	27438348	27438348	+	Silent	SNP	G	G	A			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	GCAGAGACCTGCAAGCAAACC	0.468	50	93
TRIM54	57159	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	27505759	27505759	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	TGCCAACGACGTCTTCCAGGT	0.592	133	229
TTN	7273	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	179455636	179455636	+	Silent	SNP	C	C	T			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	CAGGAGGAGACGGAGGACTAA	0.458	49	109
TTN	7273	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	179591914	179591914	+	Missense_Mutation	SNP	C	C	G			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	GATTGTTCATCTGTATGACGG	0.448	21	63
IDH1	3417	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	209113112	209113112	+	Missense_Mutation	SNP	C	C	T	rs121913500		TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	ATAAGCATGACGACCTATGAT	0.393	62	87
CMYA5	202333	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	79026993	79026993	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	TCCAAATATGCAGCCCCACTC	0.443	36	82
CCNC	892	hgsc.bcm.edu;ucsc.edu	37	6	99999727	99999727	+	Missense_Mutation	SNP	T	T	C			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	TGATTCATCCTATAAGGAAAT	0.234	4	28
STX11	8676	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	6	144507945	144507945	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	GCTGGTGGCCGACGTGAAGCG	0.612	11	26
SHPRH	257218	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	6	146271526	146271526	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	TGCGTTTCTTGCTGATGTGTT	0.468	68	167
FNDC1	84624	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	6	159618496	159618496	+	Missense_Mutation	SNP	T	T	C			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	CATGTGAAACTGCTGTCCACT	0.453	74	190
SLC12A9	56996	hgsc.bcm.edu;ucsc.edu	37	7	100451890	100451890	+	Missense_Mutation	SNP	A	A	G	rs147177626	byFrequency	TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	CTCCCTGCCAATGGGGCCGGG	0.632	19	26
SLC26A5	375611	hgsc.bcm.edu;broad.mit.edu	37	7	103018895	103018895	+	Missense_Mutation	SNP	C	C	G			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	CCACTCACTGCTTTGACAACA	0.448	13	132
SLC26A5	375611	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	103018911	103018911	+	Missense_Mutation	SNP	G	G	T			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	CAACAGTTGCGTTGGCCATAT	0.448	22	194
COG5	10466	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	106851543	106851543	+	Splice_Site	SNP	C	C	T			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	TTATTTATTACCTGGAAAGGA	0.468	34	75
RB1CC1	9821	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	53569559	53569559	+	Missense_Mutation	SNP	G	G	C			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	TCACAATTTTGAGAGTGCATT	0.323	21	43
DMRT3	58524	hgsc.bcm.edu;broad.mit.edu	37	9	977181	977181	+	Silent	SNP	C	C	G			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	AGTGCATCCTCATCATCGAGC	0.667	6	52
MXRA5	25878	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	3241681	3241681	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	TGCACCTGGGCGTCTGCCTCT	0.532	35	19
RS1	6247	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	18665417	18665417	+	Missense_Mutation	SNP	C	C	G			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	GTGACCTCCCCTGACTCGAAA	0.507	15	52
RSPO4	343637	broad.mit.edu;ucsc.edu	37	20	944643	944643	+	Missense_Mutation	SNP	T	T	C			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	GGTGGCTGCCTCCTCATGCCC	0.672	8	82
NAB2	4665	broad.mit.edu;ucsc.edu	37	12	57487218	57487218	+	Silent	SNP	G	G	A			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	GGCTGACGCCGCCCCCTGCTG	0.657	3	16
DCAF17	80067	broad.mit.edu;ucsc.edu	37	2	172337525	172337525	+	Silent	SNP	A	A	C			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	ACTTGGTGCTACACATAGAGC	0.398	6	160
HERC2P3	283755	broad.mit.edu;ucsc.edu	37	15	20643888	20643888	+	RNA	SNP	T	T	C			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	CGTCCGCATGTCAGAGAACTG	0.498	58	189
F13A1	2162	broad.mit.edu;ucsc.edu	37	6	6266847	6266847	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	TCGACTGGTTCGAAGTACGCC	0.458	67	137
SF3B14	51639	broad.mit.edu;ucsc.edu	37	2	24299092	24299092	+	Missense_Mutation	SNP	A	A	T			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	GGCCGCTTGCATCGCCATCTT	0.567	74	161
NELL2	4753	broad.mit.edu;ucsc.edu	37	12	45000951	45000951	+	Splice_Site	SNP	C	C	T			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	GATATTCTTACCCGTTTCACA	0.408	6	45
SLC7A9	11136	broad.mit.edu;ucsc.edu	37	19	33334813	33334813	+	Missense_Mutation	SNP	A	A	T			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	GATGTAAGAAAGCACTTTGAG	0.562	22	35
FUBP1	8880	broad.mit.edu;hgsc.bcm.edu	37	1	78432569	78432570	+	Splice_Site	INS	-	-	G			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	TAACATTACCAGGAGCTATCTG	0.312	30	41
ASB6	140459	broad.mit.edu;hgsc.bcm.edu	37	9	132401579	132401580	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	CAAGGGGCTACTCTCGTGGATC	0.624	25	53
APPBP2	10513	broad.mit.edu;hgsc.bcm.edu	37	17	58571849	58571849	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HT-7616-01A-11D-2253-08	TCGA-HT-7616-10A-01D-2253-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	ddcc007a-1ffc-4fe3-9946-413845db180a	8cc3a7af-61c7-4608-9d1c-80de9345f44c	CAACCTGAATGGCTTTTTCCT	0.403	32	78
