Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	ref_context	gc_content	t_alt_count	t_ref_count
DHTKD1	55526	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	10	12142226	12142226	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGGGCCACCGCGGAAGCTCTT	0.423	60	208
MKX	283078	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	10	28023587	28023587	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGGGTGCCACGTAGTCCTCAC	0.488	97	63
ARHGAP22	58504	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	10	49687793	49687793	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ACCTTCTCCCGCTCCCCGGCA	0.672	10	21
STOX1	219736	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	10	70645798	70645798	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GACGACTTACGTCAAATGCTG	0.438	28	81
TSPAN15	23555	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	10	71258152	71258152	+	Splice_Site	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCAGGAACACGGTAGACACTG	0.587	31	48
CDH23	64072	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	10	73461953	73461953	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CAAAATCGTCGTCTCTGTTAC	0.657	46	204
CYP2C18	1562	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	10	96480238	96480238	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ACAGAGACAACGAGCACCACT	0.423	21	90
DNTT	1791	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	10	98064310	98064310	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCCCGGCAGACGGGTGCCTTG	0.567	21	95
CRTAC1	55118	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	10	99696063	99696063	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CATCGACCGCGATGTTCACCA	0.667	36	45
GBF1	8729	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	10	104141973	104141973	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGCAGGTGGGCGTGCCACCTA	0.682	50	170
PDCD11	22984	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	10	105184818	105184818	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGGTAGAGACGGGCCACCTGG	0.547	25	107
CALHM2	51063	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	10	105209166	105209166	+	Missense_Mutation	SNP	C	C	T	rs139579411		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCTGAGCCTGCGGCTGACCTC	0.592	35	137
SFR1	119392	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	10	105883598	105883598	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGAGAAACCAGCATCTTCCAC	0.299	9	85
EIF3A	8661	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	10	120796752	120796752	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TATCCCTATCGTCCCGGCGAC	0.547	37	149
GPR26	2849	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	10	125426287	125426287	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCGCCTCCGCGACGCGGCGCT	0.701	8	19
GPR26	2849	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	10	125426409	125426409	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCAGCCGGCGGCCAGACGAGC	0.682	19	25
CHST15	51363	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	10	125804256	125804256	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCCCGTGCGCGTGCGCCAGGT	0.662	17	25
DEAF1	10522	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	654033	654033	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCCTCCCGGCCGCAGTTAACG	0.622	12	54
PIDD	55367	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	800359	800359	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGAGCCTCCCGGTCCAGAGTG	0.632	38	96
MUC2	4583	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	1080294	1080294	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCGTATATGACGACATCGGGG	0.647	6	19
TRPM5	29850	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	2428525	2428525	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CACCTGGAACGTGTAGCTGCA	0.642	20	15
OR51B4	79339	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	5322671	5322671	+	Missense_Mutation	SNP	C	C	T	rs115916434	by1000genomes	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CAAGAGGGCACGGGAACCACA	0.423	54	75
ZNF143	7702	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	9522711	9522711	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GAAAAGTGCACGTTAGGACAC	0.433	58	122
TSG101	7251	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	18503252	18503252	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTTCAATAGCGTTTTCTTCTG	0.388	41	68
TMEM86A	144110	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	18723160	18723160	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCTACGCCTCGGCCTTTGGCA	0.587	104	102
ELP4	26610	hgsc.bcm.edu;ucsc.edu	37	11	31805009	31805009	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGGCAGAATCCGCCAAGCGGC	0.522	47	138
CSTF3	1479	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	33120307	33120307	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TACTTCATGCGACTCTAAGGT	0.393	28	128
KIAA1549L	25758	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	33604946	33604946	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCCCATTGCCGTGGTCACGGT	0.547	10	11
EXT2	2132	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	44255740	44255740	+	Missense_Mutation	SNP	G	G	C			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GAACTGTGAAGATATTGCCAT	0.428	19	45
INCENP	3619	hgsc.bcm.edu;broad.mit.edu	37	11	61912746	61912746	+	Silent	SNP	C	C	T	rs141016037		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTCAGATCGACGAGAAGACTG	0.577	10	142
RASGRP2	10235	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	64506852	64506852	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCAGGGCTAACGTGGCTGTGG	0.642	13	84
SF1	7536	hgsc.bcm.edu;ucsc.edu	37	11	64532975	64532975	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGCCATCGCCGCCGCGGGGAG	0.637	130	135
VPS51	738	hgsc.bcm.edu;broad.mit.edu	37	11	64875676	64875676	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CAGGGAGGGCGGCTCAGGCGC	0.716	5	17
EFEMP2	30008	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	65635366	65635366	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTTTCCAGCACGGATCTGAAA	0.552	48	151
PELI3	246330	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	66243521	66243521	+	Silent	SNP	C	C	A	rs139368303		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCTACTGGGCCCAGACACCAC	0.672	10	18
CTD-3074O7.11	0	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	66297334	66297334	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCTGCGCCTACGTGCTGCCCG	0.677	33	49
SPTBN2	6712	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	66460877	66460877	+	Missense_Mutation	SNP	G	G	A	rs150801133	byFrequency	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCTCAGGTCCGCGATCCGGGG	0.627	9	41
KDM2A	22992	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	67012792	67012792	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGGAGCCAGACGGAGACGAGT	0.552	39	88
SUV420H1	51111	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	67925272	67925272	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GAATAAAATCGTCTTCAAAGT	0.403	39	43
MRGPRD	116512	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	68748335	68748335	+	Missense_Mutation	SNP	C	C	T	rs144924033		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCTGCCATCCCGCACAGGCAG	0.597	53	57
PRCP	5547	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	82550376	82550376	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CACCTGGCCCGAATAATTGTA	0.403	27	108
AMOTL1	154810	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	94554766	94554766	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GACCTCTTCCGCCAGCGGGCC	0.662	19	25
AASDHPPT	60496	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	105967614	105967614	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AATTCCAATACGAAATGGTAC	0.348	10	32
DSCAML1	57453	hgsc.bcm.edu;ucsc.edu	37	11	117352692	117352692	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGTGTGGAGACGACCTCGTCG	0.627	13	102
ABCG4	64137	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	119029628	119029628	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CATGGCTGACGTGCCCTTTCA	0.542	53	146
ZNF202	7753	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	123596990	123596990	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCTTCCGGTGCGCCAGGTACC	0.577	66	75
OR10G7	390265	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	123909049	123909049	+	Silent	SNP	G	G	A	rs12291067	byFrequency	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGGAACAGACGATGGACACAT	0.557	31	111
NINJ2	4815	hgsc.bcm.edu;broad.mit.edu	37	12	674455	674455	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TATGTGCCCCGAAGGCTGTAA	0.537	9	95
KCNA1	3736	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	5021390	5021390	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ACCAGAAGGGCGAGCAGGCCA	0.517	55	98
CLSTN3	9746	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	7310123	7310123	+	Missense_Mutation	SNP	G	G	A	rs138735435		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGTGGTGTGCGTGGGCTTCCT	0.667	35	52
KLRC2	3822	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	10584712	10584712	+	Missense_Mutation	SNP	T	T	C			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TACTTATGTTTGAAAGCCAAA	0.313	15	56
LRP6	4040	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	12302045	12302045	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGTTGTATTTCCAGGTTCTGA	0.438	155	236
ASUN	55726	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	27069110	27069110	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TAAAACAGAACGACCTGTCAA	0.338	17	43
DDN	23109	hgsc.bcm.edu;broad.mit.edu	37	12	49392947	49392947	+	Missense_Mutation	SNP	A	A	G			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TAATGACAGGAAATAGTCTTC	0.607	32	47
KMT2D	8085	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	49422916	49422916	+	Missense_Mutation	SNP	A	A	G			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CACCGGCCTGAGCCCAGATGA	0.617	13	59
KMT2D	8085	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	49445202	49445202	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTCCTCAGGCCGGGGGGACAG	0.687	53	84
KMT2D	8085	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	49445921	49445921	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCGACTCCTCCAGTGGAGAAA	0.617	38	71
KRT83	3889	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	52713013	52713013	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCAGCCTCCACGCACTCGGCC	0.612	87	175
ITGA7	3679	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	56094110	56094110	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCCCCGCCTCGTAGGGACCGT	0.662	26	55
SMARCC2	6601	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	56568511	56568511	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGGTTCAGTCGGTAAGTGTCA	0.468	30	190
TIMELESS	8914	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	56815752	56815752	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTTGCGTGTTCGAGGAACAGT	0.547	93	114
MARCH9	92979	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	58152527	58152527	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTGGGGCCACGAGCCGCCCCC	0.652	14	30
USP15	9958	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	62715345	62715345	+	Silent	SNP	T	T	C			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AACCACTGAATAAACCAGACA	0.333	24	41
LEMD3	23592	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	65637238	65637238	+	Silent	SNP	T	T	C			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGAATATGTTTGATCCCGTTA	0.318	41	71
BEST3	144453	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	70048984	70048984	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TTTCCTCAGCGCTGGCTGAAA	0.557	24	79
CCER1	196477	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	91348005	91348005	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CAGCTTGACCGGCCGCGGCAG	0.667	46	93
CCDC41	51134	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	94769688	94769688	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TTTATTTCTCGTTCAGCTTTA	0.259	6	19
NT5DC3	51559	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	104208744	104208744	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGGTCCCGTGCAGCATTAAAT	0.448	83	144
TDG	6996	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	104376688	104376688	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GAAAGGACCACGCCCGGCAGC	0.463	63	128
KCTD10	83892	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	109889453	109889453	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ATCCTCCGCACGCGCTCGATC	0.716	48	88
CIT	11113	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	120128190	120128190	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTTCGGGCGGCGCTGGGCTGG	0.706	14	23
CIT	11113	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	120189940	120189940	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTCCAGGGCCGCCCGTGCAGC	0.627	30	65
RNF10	9921	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	121000755	121000755	+	Missense_Mutation	SNP	A	A	G			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TAGACTCGGGAAGAGGCTCTG	0.547	34	73
PITPNM2	57605	hgsc.bcm.edu;broad.mit.edu	37	12	123473364	123473364	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCGTGAGGGCGTCAGGGCAGT	0.642	6	16
NCOR2	9612	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	124826571	124826571	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGTACAGGTGCGGGTAGGTGG	0.652	24	58
TMEM132D	121256	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	129566505	129566505	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCACCATGGCGTGCTGGTACT	0.657	46	87
RIMBP2	23504	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	130921520	130921520	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCCCACGGGCGGCTCCAGCAT	0.711	18	20
RIMBP2	23504	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	130927121	130927121	+	Missense_Mutation	SNP	G	G	A	rs147881182	byFrequency	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTTCCCCAGCGTGCTTGCCAA	0.592	30	123
POLE	5426	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	133214643	133214643	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCTTCCACACGGCGCTTCTTT	0.547	21	142
POLE	5426	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	133250239	133250239	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGGCCTTGGCGGCCGCCTTGA	0.582	138	239
POLE	5426	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	133254167	133254167	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CACTCACCACGTGGATCTTCA	0.498	32	61
CDC16	8881	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	13	115016143	115016143	+	Missense_Mutation	SNP	T	T	C			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCACAGCTGATGAAAGGGTAC	0.428	53	17
TEP1	7011	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	14	20846220	20846220	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTGGCAACCCGCATGCAGGAA	0.592	97	41
RABGGTA	5875	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	14	24737796	24737796	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCAACTGGTCGTTGAGGGAGG	0.552	57	27
KHNYN	23351	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	14	24901644	24901644	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCAGGGCATGGCACGGGGTCG	0.667	13	52
FBXO34	55030	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	14	55818984	55818984	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCGAGATCCACGCTATAGAGA	0.478	54	37
C14orf37	0	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	14	58605364	58605364	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGACTCAGCACCAGGAAAAGA	0.498	58	35
SPTB	6710	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	14	65253771	65253771	+	Missense_Mutation	SNP	G	G	A	rs138556050		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGTCTTGTCCGTGATCCACTT	0.592	42	10
ESRRB	2103	hgsc.bcm.edu;broad.mit.edu	37	14	76905826	76905826	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CGCCAGCGGCGGCTTTGGCCT	0.692	53	22
RIN3	79890	hgsc.bcm.edu;broad.mit.edu	37	14	93118358	93118358	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	tgcccccCACGTCACACCCCA	0.711	12	5
AK7	122481	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	14	96864584	96864584	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCTGACTTTGCGGTGGAGACG	0.547	54	37
TDRD9	122402	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	14	104490932	104490932	+	Missense_Mutation	SNP	C	C	T	rs139118201	by1000genomes	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CAGAAGCAGACGGTAGATCCT	0.343	44	28
ADSSL1	122622	hgsc.bcm.edu;ucsc.edu	37	14	105207555	105207555	+	Silent	SNP	C	C	T	rs138449071	byFrequency	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGGGTGCCAACGCCGCCCTCC	0.612	41	16
CEP170B	283638	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	14	105354097	105354097	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCCATGCCCCGGAAGCGGGCC	0.697	5	9
TJP1	7082	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	15	30003072	30003072	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGTGGAGAGACGCGCTGGTGA	0.498	63	282
SQRDL	58472	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	15	45974846	45974846	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CGTCAAAGACCGCTGCTGCAG	0.478	54	92
PIGB	9488	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	15	55647590	55647590	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTCTATGAACGGAAGTTAAAA	0.358	11	117
IQCH	64799	hgsc.bcm.edu;broad.mit.edu	37	15	67629360	67629360	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCAGCCTCACGGTTCTGCCAT	0.383	9	143
UACA	55075	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	15	70991907	70991907	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GATTGACCCCCTTTTTAGCAA	0.403	66	103
ALPK3	57538	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	15	85382932	85382932	+	Splice_Site	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCTACCTCTAGGTGTCGAGAA	0.647	66	117
ALPK3	57538	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	15	85403041	85403041	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTTGGCCATCGTGCAGGCCTC	0.657	36	44
AGBL1	123624	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	15	86800128	86800128	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCTCTGTGGTGCTTCAGATCC	0.562	10	41
KIF7	374654	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	15	90176401	90176401	+	Missense_Mutation	SNP	C	C	T	rs149548398		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ACCACAGAGCCGTTGCTGCCA	0.622	6	22
MAN2A2	4122	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	15	91455396	91455396	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCAGCTGTCCGTCAGCAGGCA	0.647	47	180
CHD2	1106	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	15	93489391	93489391	+	Missense_Mutation	SNP	T	T	C			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CAGAATTGCATTGACAGCTTC	0.418	49	71
MSLN	10232	hgsc.bcm.edu;broad.mit.edu	37	16	814961	814961	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCCGCATCACGAAGGCCAATG	0.701	12	36
RPUSD1	113000	hgsc.bcm.edu;broad.mit.edu	37	16	836114	836114	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGGTCAGGGTCGGGGGTGGCC	0.726	53	42
PRR25	388199	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	855739	855739	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CAGCGCAGCCGCTCGCAAATG	0.647	25	28
RAB26	25837	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	2202854	2202854	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTACGCCCAGCACGACGTGGC	0.687	18	55
ABCA3	21	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	2367755	2367755	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCCCATCATGCGCATGTACTC	0.627	59	68
NTN3	4917	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	2522004	2522004	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTGCCTCGGGCGCCCCTCAAC	0.706	15	57
NTN3	4917	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	2522180	2522180	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGACTATGGCCGTCTGCCTGC	0.697	21	46
ZNF205	7755	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	3169669	3169669	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGAAGCCCTACGCCTGCACTG	0.682	87	95
ABAT	18	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	8858658	8858658	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CAATGAAAACGCCTTAAAGAC	0.592	25	110
NDE1	54820	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	15758701	15758701	+	Silent	SNP	G	G	A	rs143820142		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AAGATCTGGCGATGACCTACA	0.473	95	81
DNAH3	55567	hgsc.bcm.edu;broad.mit.edu	37	16	21049298	21049298	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ATCTTCTGGGCGAGACTAGAA	0.552	4	46
IL21R	50615	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	27445714	27445714	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ACCTCCAGACGGTCATCTGCA	0.632	48	45
SEZ6L2	26470	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	29900012	29900012	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCCCATGGGCCGGCCGGGGAG	0.637	17	83
C16orf92	0	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	30035371	30035371	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTGGTGGTGGCGTTCTTCTTT	0.582	67	85
TRIM72	493829	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	31230620	31230620	+	Missense_Mutation	SNP	G	G	A	rs140684083	by1000genomes	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GAGACAGTGCGTCAGTTCCGG	0.647	46	160
C16orf58	0	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	31512031	31512031	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AAAGACGATGCGGCCCAGCAT	0.542	16	59
CHD9	80205	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	53190078	53190078	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCAGATGATGCATTTGTACAA	0.388	6	53
CDH5	1003	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	66424460	66424460	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGACAAACCCCGCCCACAACG	0.557	58	55
TRADD	8717	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	67188655	67188655	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CAGCGTGGCGCGGCGGCCCTC	0.706	9	19
SLC9A5	6553	hgsc.bcm.edu;broad.mit.edu	37	16	67289369	67289369	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TACCTGAAGGGAGTCGGTCAG	0.587	59	63
CENPT	80152	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	67863714	67863714	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTCCTGGCCCGTCAGCCTCAG	0.612	59	162
DDX19A	55308	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	70400563	70400563	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGCTTTTCTCCGCCACCTTTG	0.562	43	96
MARVELD3	91862	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	71674814	71674814	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CATGTACGGCGCCAGCGTGGT	0.597	36	39
DHX38	9785	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	72130788	72130788	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTTTTGGGAACGCAGTCGGCA	0.547	171	178
DHX38	9785	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	72133711	72133711	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCGAGGACTACGTGAGGAGGC	0.577	32	22
CDT1	81620	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	88873762	88873762	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CGGCTGCAGCGCTTAGAACGG	0.657	38	47
CBFA2T3	863	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	88958664	88958664	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCAGGCCCAGCACCAGTGTGC	0.627	20	76
CDH15	1013	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	89256813	89256813	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GAACCCACTTCGGACCAGCCT	0.687	8	29
ANKRD11	29123	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	89347172	89347172	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGCTGGGCTCCGGGGGGATGA	0.711	10	104
SPG7	6687	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	89614459	89614459	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CACGCGGCGCGGGAGGGACAC	0.642	55	272
SGSM2	9905	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	2265510	2265510	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTACGCACGGCGCTCATCGAG	0.637	49	160
OR1D2	4991	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	2995776	2995776	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTGGATTTTTCGTGACCCACA	0.468	53	17
ZZEF1	23140	hgsc.bcm.edu;broad.mit.edu	37	17	3999984	3999984	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TTCCAGTTTCCGTAAGAAAAC	0.368	94	28
CHRNE	1145	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	4804399	4804399	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GAGTAGATGACGTCAGTCTCC	0.652	117	69
TP53	7157	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	7577138	7577138	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AAAGCTGTTCCGTCCCAGTAG	0.527	41	14
TP53	7157	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	7578463	7578463	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGCGCGGACGCGGGTGCCGGG	0.612	83	28
PFAS	5198	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	8167651	8167651	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AAGATGCCTCGGAAGGTATGT	0.622	51	11
MYH8	4626	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	10299869	10299869	+	Splice_Site	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGAGGACTCACGTTGCAAGTT	0.463	33	14
DNAH9	1770	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	11660881	11660881	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ACATCAACCCGGCAGACTTGG	0.428	18	71
DNAH9	1770	hgsc.bcm.edu;broad.mit.edu	37	17	11711063	11711063	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CATATCAATCGCATCTTGGAG	0.532	10	128
TRPV2	51393	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	16336966	16336966	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GATGCTGACCGTTGGCACTAA	0.592	41	160
KCNJ12	3768	hgsc.bcm.edu;broad.mit.edu	37	17	21319341	21319341	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCCATGTGCGCGCGCAGCTCA	0.642	31	72
NEK8	284086	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	27065189	27065189	+	Missense_Mutation	SNP	G	G	A	rs138066977		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TTCATCTCGCGTTTCCTGGAG	0.657	18	55
ERBB2	2064	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	37866098	37866098	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TAAGGGCTCCCGCTGCTGGGG	0.597	74	24
KRT10	3858	hgsc.bcm.edu;ucsc.edu	37	17	38978581	38978581	+	Missense_Mutation	SNP	C	C	T	rs117610737	byFrequency	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ATAGCTTCCACGAAAGCTACC	0.567	203	58
KRTAP4-11	653240	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	39274307	39274307	+	Silent	SNP	G	G	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGCAGCACTGGGGCTTGCAGC	0.657	21	96
TUBG1	7283	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	40766567	40766567	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ACTTCATCCCGTGGGGCCCCG	0.652	108	28
FMNL1	752	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	43314943	43314943	+	Silent	SNP	G	G	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGCTGCTGGCGGCCGTGTGCT	0.607	207	97
ITGA3	3675	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	48157736	48157736	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCACCTTCATCGAGGTCAGTG	0.602	12	30
EPN3	55040	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	48616601	48616601	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTGCAGGGGCCGTGGTCCACC	0.607	74	26
VMP1	81671	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	57842391	57842391	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TTAATTTTCCCGAACCACCCT	0.368	20	94
ERN1	2081	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	62144066	62144066	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCTTGGGGAACGGGTACTTCC	0.592	34	5
BTBD17	388419	hgsc.bcm.edu;broad.mit.edu	37	17	72353024	72353024	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CGCCCGCCGCGTCGCCGCCGC	0.771	13	4
BTBD17	388419	hgsc.bcm.edu;broad.mit.edu	37	17	72353354	72353354	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCGACGCGGCGTGGAACTGGT	0.731	17	4
QRICH2	84074	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	74289330	74289330	+	Missense_Mutation	SNP	C	C	T	rs151086130	by1000genomes	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TACACATCCACGCTGATCCAT	0.498	158	57
DNAH17	8632	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	76558007	76558007	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ATACCTGGGCGCCACCTCGGC	0.587	67	11
EPB41L3	23136	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	18	5423406	5423406	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CATGGTATAACGTTTGCTGGA	0.478	38	31
NPC1	4864	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	18	21114452	21114452	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CGCGCTCCACGCGGCTGCCTT	0.587	31	20
RNF125	54941	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	18	29648291	29648291	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGCTCTTATCCGAAGAGTCTT	0.338	33	32
PALM	5064	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	746408	746408	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ACGGCCGGGGCGGCAGAGACC	0.726	19	37
SHD	56961	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	4290594	4290594	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCGAGCATCTGGCTCTGCTGT	0.662	45	101
DUS3L	56931	hgsc.bcm.edu;broad.mit.edu	37	19	5786850	5786850	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CGAGAGCGGCCGTGGAGCTGG	0.642	12	22
VAV1	7409	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	6772867	6772867	+	Missense_Mutation	SNP	C	C	G			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTGCCGGGTGCTGCCGCCCAG	0.677	18	89
PNPLA6	10908	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	7619474	7619474	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGTGGCTGGCCCAGCAGGAGG	0.652	27	81
FBN3	84467	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	8188415	8188415	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGCTGCCCACCGTGTTTCTGC	0.607	41	41
MYO1F	4542	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	8601249	8601249	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCACGCCACCGCGGCCACGTC	0.647	59	80
ZNF559	84527	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	9453655	9453655	+	Nonsense_Mutation	SNP	C	C	T	rs147456906	by1000genomes	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ATATCTTATTCGACATCTAAG	0.438	38	99
ZGLP1	100125288	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	10419252	10419252	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTGGGGTCACGTTTTCTTGGG	0.617	14	24
CNN1	1264	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	11660568	11660568	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGGGTGAGCCCGCCCACAACC	0.632	29	145
MAN2B1	4125	hgsc.bcm.edu;broad.mit.edu	37	19	12768302	12768302	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCGCGTAGTCGTTGGCCACGT	0.682	5	3
TNPO2	30000	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	12817117	12817117	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ACAAGGGTGTCCAGGATGTAG	0.587	23	76
SLC1A6	6511	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	15072860	15072860	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TTGAGGCTGTCGAAGAAGTCC	0.572	82	114
PGLYRP2	114770	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	15580456	15580456	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGTGAAGTGCGGCCAGGTGCG	0.721	13	14
OR10H1	26539	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	15918656	15918656	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CGGAGAGGGCGCACAGGAAGA	0.642	53	123
CTB-52I2.8	0	hgsc.bcm.edu;broad.mit.edu	37	19	18092920	18092920	+	RNA	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGCCTGGACCGTGCGCGTCTG	0.652	13	7
TSSK6	83983	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	19625703	19625703	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCTCGGGTGACGCGTAGGCGG	0.662	9	50
CILP2	148113	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	19655182	19655182	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGTGACGTTCGTGGACCCCCG	0.692	89	193
CD22	933	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	35823774	35823774	+	Missense_Mutation	SNP	G	G	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTGGGGCTGAGGATGGAGTCC	0.542	21	77
WBP7	9757	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	36216664	36216664	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCATACCACCCGGCCTGTCTG	0.602	5	15
LGALS4	3960	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	39299582	39299582	+	Silent	SNP	G	G	A	rs140167180		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CAAAGTTCACGAAGAACCTGG	0.642	7	21
NCCRP1	342897	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	39691350	39691350	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGGCTGCGGCGGACACGGGTG	0.632	220	295
PRX	57716	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	40913824	40913824	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCGGCACTCCGGCTCCTGGCC	0.627	25	69
LIPE	3991	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	42912409	42912409	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGCGTTTGTAGTGCTCCCCGA	0.627	49	247
PPP1R13L	10848	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	45885827	45885827	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGCCGTGCAGCGCGGCCCACC	0.697	33	112
PGLYRP1	8993	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	46522887	46522887	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ATACGAGCCCGTCTTCTCCAA	0.592	31	38
GRIN2D	2906	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	48908573	48908573	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CGACTGTCGCGCCCAGAACCG	0.652	19	8
TSKS	60385	hgsc.bcm.edu;broad.mit.edu	37	19	50265270	50265270	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCAGGATTTCCGTGATGTCTG	0.622	9	119
SPIB	6689	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	50926144	50926144	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCTTCGACCCGGCAGCAGCCG	0.662	50	148
ZNF841	284371	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	52569526	52569526	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGTTTCTCTCCGGTATGAATT	0.398	10	27
LILRB4	11006	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	55175317	55175317	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CGGGAGTACCGTCTGGATAAA	0.587	89	123
NLRP7	199713	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	55451430	55451430	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCAAGGCCATCGACCACGAAC	0.567	100	107
NLRP2	55655	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	55493635	55493635	+	Missense_Mutation	SNP	A	A	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GAGAGATACAAGATGCTGATC	0.542	56	189
NLRP2	55655	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	55494882	55494882	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCAGGAGCTCCTCGGCTGTCT	0.517	35	47
ZSCAN18	65982	hgsc.bcm.edu;broad.mit.edu	37	19	58596148	58596148	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CGCGGGTGGACGGTTGGGGGC	0.726	5	12
MMEL1	79258	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	2541236	2541236	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CACACGGTTCCGTGGTCGGGT	0.602	52	97
CHD5	26038	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	6202326	6202326	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCTCAAACTCGCGTTCCCAGT	0.607	69	113
ICMT	23463	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	6285295	6285295	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCATAGCTGACGCCGCAGATG	0.517	49	96
DNAJC11	55735	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	6697342	6697342	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCACCTTCTCGCTCTTCCTGC	0.567	68	154
RERE	473	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	8674675	8674675	+	Missense_Mutation	SNP	G	G	A	rs142313428		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGATGCCACCGGCAGAGAGCA	0.488	48	181
DNAJC16	23341	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	15874846	15874846	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GATGACAAGGCGGTACAACAT	0.428	36	44
SPEN	23013	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	16202978	16202978	+	Missense_Mutation	SNP	G	G	A	rs139125517		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CGGGAGGTACGAGGCAGAAGG	0.542	48	106
UBR4	23352	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	19501461	19501461	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGAATCAAGTCGGTTCAAATC	0.438	59	125
HSPG2	3339	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	22166340	22166340	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCAAGGTGGCCGTGTGTCCAG	0.627	84	104
HSPG2	3339	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	22168798	22168798	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGGCCTGGGCCGCTGGCTGCA	0.642	13	67
HTR1D	3352	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	23519885	23519885	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGATTTTCACGTGGTTGAAAA	0.567	85	109
EXTL1	2134	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	26349416	26349416	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGTGCAGGGGCGATGGCCTTA	0.542	29	145
TRIM63	84676	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	26387782	26387782	+	Missense_Mutation	SNP	C	C	T	rs139426966		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TTCTCATCTTCGTGCTCCTTG	0.582	24	89
PHC2	1912	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	33837953	33837953	+	Silent	SNP	G	G	A	rs145356735		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGAGCGCCGCGGTCTGCAGCA	0.667	42	62
CSMD2	114784	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	34180250	34180250	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTGATGCGGGCGGTGCCCTCC	0.632	136	251
ZNF691	51058	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	43317024	43317024	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CGGCACGAGCGGATCCACCTG	0.562	40	62
TIE1	7075	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	43779639	43779639	+	Splice_Site	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGTCAGGCTCGGTCAGTGACC	0.577	28	53
PTPRF	5792	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	44056971	44056971	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCATGCTGAGCGCCAGCACCA	0.726	6	6
RAD54L	8438	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	46739410	46739410	+	Missense_Mutation	SNP	G	G	A	rs144207599	byFrequency	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AAGCTGTGCCGTGCCCGAAGG	0.512	7	14
DMRTB1	63948	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	53925205	53925205	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CAAGGGACACGCGGGCAAATG	0.612	20	43
DHCR24	1718	hgsc.bcm.edu;broad.mit.edu	37	1	55337128	55337128	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCTGGGACTCGTGGGTGAACT	0.592	8	105
FAM73A	374986	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	78280851	78280851	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGAGCCTATCGTCTCCAAGAG	0.368	10	72
ZNF644	84146	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	91382483	91382483	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ACAATATGTCGTTGTAAGTGC	0.423	28	55
ABCA4	24	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	94512531	94512531	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCTGGTTCTCGTAGAAGGTGA	0.552	129	198
ALG14	199857	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	95492780	95492780	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGAACCTCCCGGCTTCTTGGA	0.453	32	61
TRMT13	54482	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	100606421	100606421	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCTATTTTAGGTAACATTGAA	0.338	17	49
CELSR2	1952	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	109801232	109801232	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CACCGGACCACGTGGTGGTCT	0.716	7	15
CHIA	27159	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	111857960	111857960	+	Missense_Mutation	SNP	G	G	A	rs140031055		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AAATTCCTGCGCCAGTATGAG	0.547	90	187
FAM46C	54855	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	118166435	118166435	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGGTGGTGAACGAGAGCACCG	0.527	47	70
ITGA10	8515	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	145534934	145534934	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTACTTTGGCCGAAGTGTGGA	0.582	39	223
ANXA9	8416	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	150967084	150967084	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTCCTGATTCGCATCCTTATC	0.468	129	222
SEMA6C	10500	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	151105813	151105813	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGAGAGAGGGCGCGGGAGCCC	0.726	11	30
FLG	2312	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	152282395	152282395	+	Missense_Mutation	SNP	C	C	T	rs139975241		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTCTGCATGACGAGTGCCTGA	0.567	246	486
PGLYRP3	114771	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	153276410	153276410	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ATACCTGGGCGACAGGTGACC	0.552	55	59
RRNAD1	51093	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	156702140	156702140	+	Missense_Mutation	SNP	C	C	T	rs147288369		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGCCTTTACCCGGATGCCTGG	0.592	48	98
SLAMF8	56833	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	159802792	159802792	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TATAGCTGGCGACGGGAGACA	0.542	26	153
CCDC181	57821	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	169364358	169364358	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTGTTTAGAACGCTTAGCTTC	0.398	42	61
SLC9C2	284525	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	173551052	173551052	+	Missense_Mutation	SNP	C	C	T	rs4916373		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TTGCTAAAAACGTCAGCCAAT	0.323	28	33
DARS2	55157	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	173826739	173826739	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCGGGGACATGACCTCATGAG	0.483	33	135
TNN	63923	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	175097740	175097740	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTTGGTGCCCGTTTCCCACAC	0.527	40	155
SOAT1	6646	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	179310292	179310292	+	Silent	SNP	C	C	G			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGGCCACTGGCTATAGCAAGA	0.428	103	208
PTGS2	5743	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	186645692	186645692	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TTGTGTTCCCGCAGCCAGATT	0.507	74	104
PTPRC	5788	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	198671623	198671623	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTTACCTGCACGCACCTCCAA	0.498	144	298
IGFN1	91156	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	201184276	201184276	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CACCCTGACCGTCCAGGGTAA	0.587	26	40
ELF3	1999	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	201982319	201982319	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GATGGTTTTCGTGACTGCAAG	0.597	44	63
ADIPOR1	51094	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	202914187	202914187	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGGCAGAGCACTGCACCCAAA	0.448	52	83
FMOD	2331	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	203311549	203311549	+	Silent	SNP	G	G	A	rs142981560	byFrequency	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCTCGTTCCCGTCCAGGCGCA	0.642	32	56
DSTYK	25778	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	205138721	205138721	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTGATCTTTCGCTCTCCATTC	0.483	17	77
RAB7L1	8934	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	205740772	205740772	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGAGGTGAAGCGCTCCTGCCC	0.517	62	98
CR1	1378	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	207793265	207793265	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ATGGAATCTCGAAGGAGTTAG	0.363	7	15
CR1	1378	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	207793369	207793369	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CAGTGCCAGGCGGATGACAGA	0.468	29	39
MARK1	4139	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	220791991	220791991	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTGCGAGAGCGAGTTTTACGA	0.353	34	81
OBSCN	84033	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	228471282	228471282	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ACGTGCAAGACGGAGCACCCC	0.632	31	55
SIPA1L2	57568	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	232574983	232574983	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGAGACGTCGGCAGCATCAGC	0.667	12	155
KIF26B	55083	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	245848743	245848743	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GAGCTCCTGCGAAGAAGGCCG	0.652	20	38
PCED1A	64773	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	20	2820527	2820527	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CAGCGGGCGGCGCGGCTCCTC	0.637	35	45
BFSP1	631	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	20	17489628	17489628	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTCCCGCTCCGTCAGGAGCTT	0.647	13	18
PLAGL2	5326	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	20	30789887	30789887	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTCCGCCTCCCGGCCCCGAGG	0.567	32	119
DNMT3B	1789	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	20	31368261	31368261	+	Silent	SNP	G	G	A	rs138805251		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCCGCACCCCGGAGATCAGAG	0.652	14	43
BPIFB4	149954	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	20	31671678	31671678	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AAGGCATCACGGGGTAAGGAG	0.627	44	59
DYNLRB1	83658	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	20	33122560	33122560	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CACCTTCCTTCGAATTCGCTC	0.537	51	66
EPB41L1	2036	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	20	34770234	34770234	+	Silent	SNP	G	G	A	rs139137163	byFrequency	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGTTCTACCCGCCTGATCCTG	0.582	44	87
DHX35	60625	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	20	37659354	37659354	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AAGGACCATCCGTGATGACCA	0.438	41	118
SLC13A3	64849	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	20	45217829	45217829	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTATTCTTCCCGAATTACAGC	0.502	26	145
PREX1	57580	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	20	47266679	47266679	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGCCACACAGCGGGTGGGGCT	0.592	82	177
CDH4	1002	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	20	60503309	60503309	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCAACGACAACGCCCCTGAGC	0.627	89	408
CDH4	1002	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	20	60504690	60504690	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ACTCAGCTTGCGCATCCTGTA	0.532	37	111
LAMA5	3911	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	20	60905854	60905854	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGTGGGGGGCCGAGGTCGGGG	0.697	4	8
SLCO4A1	28231	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	20	61288352	61288352	+	Silent	SNP	G	G	A	rs147575435	by1000genomes	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TTATGGGCACGGGGTCGCTGG	0.687	13	106
HELZ2	85441	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	20	62195519	62195519	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCTGCCACCGCAGAGGCGTGA	0.647	14	39
ABHD16B	140701	hgsc.bcm.edu;broad.mit.edu	37	20	62493215	62493215	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTCGCTGGGCCGCTGGCTCGT	0.741	13	10
SON	6651	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	21	34923567	34923567	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GAGGTGCCCTCGACGACAGCG	0.557	27	101
PRDM15	63977	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	21	43230535	43230535	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCGCATGTGTCGGCTCATGGA	0.682	33	28
ICOSLG	23308	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	21	45651221	45651221	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCACCGCCACGACCACAAGCA	0.567	58	73
SLC19A1	6573	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	21	46951531	46951531	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ACCCGCAGGGCGTGTCCCAGC	0.716	70	67
SLC19A1	6573	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	21	46951822	46951822	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCGGGCCGCACGAGAGAGAAG	0.667	6	9
COL6A1	1291	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	21	47423450	47423450	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCGCCCACGACGTGCGGGTGG	0.711	23	69
DIP2A	23181	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	21	47916995	47916995	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TTGTGCATTCGTCTGTGGAAA	0.453	19	18
IL17RA	23765	hgsc.bcm.edu;broad.mit.edu	37	22	17589817	17589817	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCTCCGCGCCGCCCTGGACAG	0.677	7	36
MICAL3	57553	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	22	18387494	18387494	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGATGCAAGACGTTGTTGCGG	0.522	36	272
ARVCF	421	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	22	19960526	19960526	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCTGCAGCACGTGTGACGCCG	0.672	50	176
PI4KA	5297	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	22	21082106	21082106	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGGTCCAACCGAACGAGACGG	0.547	56	93
PPIL2	23759	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	22	22048118	22048118	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CATCACGTTTCGCTCCTGTGC	0.602	133	178
CABIN1	23523	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	22	24479228	24479228	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTGAAGACACGCACCCTTACA	0.582	40	52
SUSD2	56241	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	22	24581087	24581087	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTGGACCAACGACCACGCACT	0.672	29	61
MYO18B	84700	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	22	26164580	26164580	+	Missense_Mutation	SNP	A	A	G			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGCACTGAAAAAAGGCGAGGA	0.617	4	17
INPP5J	27124	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	22	31522443	31522443	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCGGTGGTGACGACAGCGACG	0.657	125	212
ELFN2	114794	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	22	37770333	37770333	+	Silent	SNP	G	G	A	rs144585839		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGTAGTACACGGCTCCCAGCA	0.607	58	128
MFNG	4242	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	22	37882079	37882079	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGGGGGCCCCGGGTTCGGCTG	0.632	26	143
SH3BP1	23616	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	22	38051660	38051660	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCTCAGCCCCGCCCCAGGAGC	0.677	9	9
CACNA1I	8911	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	22	40043868	40043868	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	gaGACATCTCGGAAGCCGGCA	0.562	34	76
TNRC6B	23112	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	22	40662440	40662440	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGGAGGTGGACGCCAGCCCAA	0.502	11	22
SGSM3	27352	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	22	40803287	40803287	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCATCCTGCGCGTGGCACGCC	0.617	44	91
L3MBTL2	83746	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	22	41620136	41620136	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ATCGGGGGTCGCCTACGGCTC	0.607	49	95
CELSR1	9620	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	22	46806347	46806347	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CATTTTTGCCGTCGACTGACA	0.632	78	152
PPP6R2	9701	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	22	50882544	50882544	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGACAAAGGACGGGTGAGCAG	0.667	46	115
TYMP	1890	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	22	50967656	50967656	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AAGCTGCTGGCGCCAGGCCTC	0.642	40	94
PXDN	7837	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	1684083	1684083	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCAGCAAATCCGCCAACCACA	0.587	23	25
DNMT3A	1788	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	25464537	25464537	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGCAATGTAGCGGTCCACCTG	0.627	31	30
HADHA	3030	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	26414365	26414365	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCAGACAAGGCGGGAAGCCAA	0.552	48	44
OTOF	9381	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	26700618	26700618	+	Splice_Site	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGCCTTCTTCCTGTGAATCAG	0.607	23	45
TRIM54	57159	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	27529116	27529116	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTGGCAGGGCGGCCGGAGCCA	0.642	51	115
PLB1	151056	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	28785936	28785936	+	Silent	SNP	C	C	T	rs147698393		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTGACATCAACGTAATTGGAG	0.488	20	98
FAM179A	165186	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	29240816	29240816	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGCCCGCCACGCCTCAGGTGG	0.672	15	34
SRBD1	55133	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	45812861	45812861	+	Missense_Mutation	SNP	C	C	T	rs145594682		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ATTAAAGAGACGAATGATGTT	0.323	38	93
EPAS1	2034	hgsc.bcm.edu;broad.mit.edu	37	2	46574124	46574124	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCCCCACAGTGTGAGCTCCCA	0.617	15	229
CLEC4F	165530	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	71043766	71043766	+	Silent	SNP	G	G	A	rs142908853		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CAGCATTAGCGTTCTTTAAAC	0.418	32	100
CYP26B1	56603	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	72359683	72359683	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTTTGAACACGGGCGCTGTGT	0.612	23	38
DCTN1	1639	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	74595114	74595114	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TAGCGGTGTAGCGTGGCCTGC	0.607	26	102
TLX2	3196	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	74742798	74742798	+	Missense_Mutation	SNP	C	C	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCGCATAGGCCACCCCTACCA	0.652	40	135
HK2	3099	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	75107689	75107689	+	Silent	SNP	C	C	T	rs144796715		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTACCCCGGACGGCACAGGTA	0.577	11	32
TCF7L1	83439	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	85531438	85531438	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ACCCCGCCCTCGCCATGAACG	0.592	81	82
REV1	51455	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	100022891	100022891	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AACTGATGGGCGACTGGGACA	0.453	23	43
IL18R1	8809	hgsc.bcm.edu;broad.mit.edu	37	2	103013337	103013337	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTGTTCTTTCCGAGTCTTAAT	0.413	20	44
RANBP2	5903	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	109383056	109383056	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCAAATGCCCGAAAAAGTAGA	0.388	325	387
POLR1B	84172	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	113322007	113322007	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCCTGCTGGACGGTGTCATGG	0.502	76	146
TMEM177	80775	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	120439264	120439264	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CGGGAACATCGTCCCCAGACA	0.582	99	98
R3HDM1	23518	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	136481617	136481617	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCGGTGGCTCCGGGACCCCCA	0.542	98	89
LRP1B	53353	hgsc.bcm.edu;broad.mit.edu	37	2	141816539	141816539	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCATTAAATCGGTTTATCCTT	0.328	7	93
LRP2	4036	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	170022532	170022532	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TTGTCACACCGGAAACGGTTT	0.388	88	110
LRP2	4036	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	170060607	170060607	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCAAATTTGTGGTCATTGCAA	0.448	76	325
TTN	7273	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	179412628	179412628	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGGGGCAGGACGACCACTGAT	0.448	27	52
TTN	7273	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	179430304	179430304	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGCCTTGACACGGAACTGATA	0.418	79	225
TTN	7273	hgsc.bcm.edu;ucsc.edu	37	2	179604439	179604439	+	Missense_Mutation	SNP	C	C	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AAAAAGAATCCATTTCTTCTT	0.388	33	234
HECW2	57520	hgsc.bcm.edu;broad.mit.edu	37	2	197183524	197183524	+	Missense_Mutation	SNP	G	G	A	rs139251909		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGATTCCTGCGACCCTTCGGC	0.612	7	117
BZW1	9689	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	201683504	201683504	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGGAGGAGATGAAAAAAAACA	0.373	19	33
CD28	940	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	204599561	204599561	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CATGACTCCCCGCCGCCCCGG	0.597	87	191
NDUFS1	4719	hgsc.bcm.edu;ucsc.edu	37	2	207008820	207008820	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCATTGGCTCGGTAAGTCTTT	0.368	28	105
ABCA12	26154	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	215809802	215809802	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTTTCGACTTCGGATCCATGC	0.363	32	33
ATIC	471	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	216209588	216209588	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ACGCCAAGAACGGGCAGGTAA	0.488	30	66
SPEG	10290	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	220334066	220334066	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AATGGCCACCGCATCCAGAGC	0.642	42	41
CCL20	6364	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	228678691	228678691	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCACCTCTGCGGCGAATCAGA	0.473	26	303
HTR2B	3357	hgsc.bcm.edu;ucsc.edu	37	2	231973425	231973425	+	Missense_Mutation	SNP	G	G	A	rs148411901	byFrequency	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ATTGGATTCCGGAAGTAGATC	0.438	37	92
DIS3L2	129563	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	233128091	233128091	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GAATCTCCACGGAATTGCCAA	0.522	17	144
CHRNG	1146	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	233405401	233405401	+	Silent	SNP	G	G	A	rs149931943		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGTGGCGGCCGGATATCGTGC	0.642	24	14
DGKD	8527	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	234371341	234371341	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGAGCTCTGCGCAGTGAGACG	0.597	46	280
UGT1A8	54576	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	234526381	234526381	+	Missense_Mutation	SNP	A	A	G			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GACCAGCCCCATTCCCCTATG	0.572	61	72
HDAC4	9759	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	239975226	239975226	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCTTCGTTCTCGCAAGTCTGA	0.662	53	65
ANKMY1	51281	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	241468876	241468876	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGCTGCCATCGGGGTAGGTCT	0.602	28	59
GPR35	2859	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	241570136	241570136	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ACGATCCGTCGCGCCCTGTAC	0.622	129	159
KIF1A	547	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	241680733	241680733	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCAGCAGGTCGTACTTGCAGT	0.662	12	17
ANO7	50636	hgsc.bcm.edu;broad.mit.edu	37	2	242148714	242148714	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCCGGCTGTTCGACCACGGCG	0.647	4	13
STK25	10494	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	242437037	242437037	+	Silent	SNP	G	G	A	rs67879108		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCACCTCTCCGAAGACGGGCC	0.657	105	113
NR2C2	7182	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	3	15065637	15065637	+	Silent	SNP	T	T	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CAGGTCTTCTTGATCCAGGGA	0.438	31	101
DCLK3	85443	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	3	36779958	36779958	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCTGCAACTTCGCTGCAGCTC	0.612	180	53
MLH1	4292	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	3	37038172	37038172	+	Missense_Mutation	SNP	A	A	C			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AAGTTGATTCAGATCCAAGAC	0.413	52	12
PRSS50	29122	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	3	46759103	46759103	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CAGCGCCCCCGGGGCTTCCCC	0.706	37	13
BSN	8927	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	3	49699985	49699985	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCGTGGTTTCCGACAGCGAAG	0.597	80	30
SEMA3F	6405	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	3	50224060	50224060	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CAAGAATGCCGTGGAGTCTGT	0.627	26	81
IFRD2	7866	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	3	50326252	50326252	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCAGCACGGCGCGGAAAGTAG	0.602	26	9
DNAH1	25981	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	3	52380763	52380763	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCTGGGGTGACGACTTAATTA	0.602	28	9
FLNB	2317	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	3	58108831	58108831	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGAAGGCCCACGGTCCCGGCC	0.542	35	166
ADAMTS9	56999	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	3	64536656	64536656	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CACGTCACAGCGTGCCCCATG	0.552	164	73
ADCY5	111	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	3	123036943	123036943	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCACCAAATCGGTCGTCTACC	0.602	41	14
ACAD11	84129	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	3	132361582	132361582	+	Missense_Mutation	SNP	A	A	G			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCAGTACAGTATAGGCTTGGG	0.328	118	36
ZBTB38	253461	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	3	141163946	141163946	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTTCGATGACGCAAGTGACCA	0.502	49	18
ZBTB38	253461	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	3	141164403	141164403	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AAACATGAACGCATCCACCTG	0.478	75	36
AADACL2	344752	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	3	151461914	151461914	+	Missense_Mutation	SNP	C	C	T	rs145856421		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AATAGATGGACGGCAAACACG	0.358	85	28
MCCC1	56922	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	3	182740306	182740306	+	Missense_Mutation	SNP	A	A	G	rs143892743		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCCTCGCTGTAAAGATTACCA	0.313	16	62
NOP14	8602	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	2943380	2943380	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCCATGATGGCGTGGAAGGAT	0.662	22	34
GRK4	2868	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	3037185	3037185	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCAGCACCCCGTGTTCAAGGA	0.582	67	132
MAN2B2	23324	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	6588894	6588894	+	Splice_Site	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CAGGAGGCCCGGGTGAGTGGT	0.642	23	45
HTRA3	94031	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	8293224	8293224	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ACTGCCCAGCGGGAGGGCAGG	0.657	38	43
DRD5	1816	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	9783925	9783925	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTTTTCGTGGCGCTGCTGGTC	0.632	25	125
PACRGL	133015	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	20715162	20715162	+	Splice_Site	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGCTTACAAGCGTAAGTACTG	0.373	36	57
STAP1	26228	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	68447189	68447189	+	Splice_Site	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCTATGCCAGCGTAAGTGCAC	0.393	68	151
UGT2B11	10720	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	70079942	70079942	+	Missense_Mutation	SNP	G	G	A	rs148268917		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TACACAAACCGTATGTTAAGT	0.418	59	108
SHROOM3	57619	hgsc.bcm.edu;broad.mit.edu	37	4	77662039	77662039	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCCCGAGTGGCGGGACAGGCC	0.711	12	20
BMP2K	55589	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	79793824	79793824	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AACATCAGCCGTCTCAACAAC	0.443	37	67
PRKG2	5593	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	82026998	82026998	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCCTCAGGTCGTCGTGTTATC	0.423	31	131
EGF	1950	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	110915913	110915913	+	Missense_Mutation	SNP	G	G	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCTCACCTCAGGGAAGATGAC	0.428	36	177
TRPC3	7222	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	122835949	122835949	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTGCAAGGTGCGATCCAGTAG	0.483	29	52
SLC25A31	83447	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	128651877	128651877	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGATCAGCCCCGAGGCGCGGT	0.701	39	54
LRBA	987	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	151829999	151829999	+	Missense_Mutation	SNP	T	T	G			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGCTTTGAATTTAAATGTACC	0.363	20	70
LRBA	987	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	151850067	151850067	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGAAGATTCCGTATGCTTTTC	0.388	34	165
SFRP2	6423	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	154709690	154709690	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CAGACGGGGGCGAAGAGCGAG	0.647	40	228
FGB	2244	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	155490927	155490927	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TTCTTCAGCACGTATGACAGA	0.423	50	91
ACSL1	2180	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	4	185724474	185724474	+	Splice_Site	SNP	C	C	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTCCACTCACCGCCACTTCCA	0.557	13	17
AGXT2	64902	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	34998924	34998924	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGGCGCAATGCGAAATGTCTG	0.368	28	39
CARD6	84674	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	40854138	40854138	+	Missense_Mutation	SNP	G	G	C			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTTTCAACCAGCAGCAGCCAC	0.483	76	127
MIER3	166968	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	56231270	56231270	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCATTACCATCGTACTCTCCA	0.313	29	140
CENPK	64105	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	64814369	64814369	+	Missense_Mutation	SNP	C	C	T	rs147863579		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AATTCCATTACGCAGCAGCAG	0.353	36	90
SLC30A5	64924	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	68413208	68413208	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AAAGCCACTCGGATTTTCTCC	0.413	66	102
MARVELD2	153562	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	68716104	68716104	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGGAATTAACGTTGCCTTGTT	0.423	61	121
PDE8B	8622	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	76649192	76649192	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ATTTTGTCTCGCTCAAGAAAC	0.368	28	51
ZCCHC9	84240	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	80604490	80604490	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCACAGAGCACGAAATAACCA	0.448	42	62
KIF3A	11127	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	132051569	132051569	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TTGGCATACCGTAATGTACTG	0.328	7	24
TMCO6	55374	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	140021557	140021557	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTCACTCCGAGCAGTCCACTG	0.617	36	175
PCDHA6	56142	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	140209817	140209817	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTGGTCCTCACGCTACTGCTG	0.706	87	141
ARAP3	64411	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	141035270	141035270	+	Missense_Mutation	SNP	C	C	T	rs138515824	byFrequency	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AAACTTCTGACGGGCAAGGTC	0.597	41	70
SYNPO	11346	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	150029450	150029450	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGCCCAGCCCGGACCCCGCCT	0.687	59	230
SLC36A1	206358	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	150856223	150856223	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CATGGTCATCGTCACCATCCT	0.517	58	90
GPRIN1	114787	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	176025905	176025905	+	Nonsense_Mutation	SNP	C	C	A	rs147380779	byFrequency	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCTGTCTTTCCTGTGGACGCA	0.572	66	126
SNCB	6620	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	176056600	176056600	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGTTTTCTCCGCGGCTGCCAC	0.677	13	55
ADAMTS2	9509	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	178566910	178566910	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCACACTGGCGGGTCCTGAAC	0.642	115	170
HNRNPH1	3187	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	179043155	179043155	+	Silent	SNP	G	G	A	rs115293737	by1000genomes	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCTGGCCACCGTAGCCGCCTC	0.473	41	282
MAPK9	5601	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	179676062	179676062	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTTAGTGCACGCTGTCCGGGC	0.498	128	162
FLT4	2324	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	5	180046723	180046723	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGCCGAAAGCGGAGGCTTCCA	0.657	93	198
TMEM14C	51522	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	6	10725225	10725225	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTTTGGCTACGCAGCACTGGT	0.448	103	328
ABCF1	23	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	6	30552327	30552327	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTGGCGCATGCGTGTCTCCCT	0.612	39	43
FGD2	221472	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	6	36978766	36978766	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGAAGAAGATCGTCCAGGAGC	0.612	15	81
PEX3	8504	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	6	143793364	143793364	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CAGAAATCTCGTTGAGCAGCA	0.348	45	21
WTAP	9589	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	6	160176453	160176453	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CAACTCAGTGCGGGGTATGAA	0.483	36	66
FRMD1	79981	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	6	168463623	168463623	+	Missense_Mutation	SNP	C	C	T	rs115999698	byFrequency	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CACGGTGGGACGACCTTCCTT	0.622	32	65
FAM120B	84498	hgsc.bcm.edu;broad.mit.edu	37	6	170626760	170626760	+	Missense_Mutation	SNP	G	G	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCATGGTGGAGCAGGATAAGA	0.443	7	101
FBXL18	80028	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	5540761	5540761	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCAGCAGGACGCCACCAGAGT	0.687	23	116
HOXA1	3198	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	27135248	27135248	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCTTGGACCACAACTTGAGTG	0.612	32	167
GGCT	79017	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	30538452	30538452	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GAGCACTTTCGTAATTTGTCA	0.338	65	105
HECW1	23072	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	43484733	43484733	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ACCCCAGCACCGGGAGCGAGA	0.716	35	54
TMEM248	55069	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	66415965	66415965	+	Missense_Mutation	SNP	C	C	T	rs143613938	by1000genomes	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTTCCTGACACGTACAGCAAC	0.522	65	323
FKBP6	8468	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	72754699	72754699	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGGTGGAGGCCGCCAAGCTTC	0.572	25	128
MLXIPL	51085	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	73013863	73013863	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CACCTGCAGACGGCTGTGTCC	0.632	53	102
PCLO	27445	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	82584436	82584436	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCATACAAAGGCTCTTTTTCA	0.373	13	76
SEMA3A	10371	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	83823817	83823817	+	Missense_Mutation	SNP	A	A	G			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CAGCCTTGGCACATTGTTCTT	0.418	29	230
AKAP9	10142	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	91737807	91737807	+	Splice_Site	SNP	G	G	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TAATCCTTTAGGTACCCAGGC	0.423	18	104
FBXL13	222235	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	102669158	102669158	+	Missense_Mutation	SNP	C	C	T	rs147832645	byFrequency	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCAGCCAGGACGACATTTTCA	0.343	36	48
TFEC	22797	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	115590971	115590971	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCCTTGATTCGGTAATTAATA	0.299	15	51
CADPS2	93664	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	121965555	121965555	+	Silent	SNP	C	C	G			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGAGCGTCTTCAGCTGGTAAA	0.398	10	16
FLNC	2318	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	128483620	128483620	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CAAGTACACCGCTGTCCAGCA	0.612	47	89
MGAM	8972	hgsc.bcm.edu;broad.mit.edu	37	7	141724872	141724872	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TTGTATGGTGCGCAGACATTC	0.398	23	51
NOBOX	135935	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	144096159	144096159	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AAGGAAGATCGGCCCTTCGCA	0.632	11	28
CNTNAP2	26047	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	147600796	147600796	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTAACTGCGACGCGGACTACA	0.537	17	32
HTR5A	3361	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	154862918	154862918	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ACGAGCTGTCCGGGCGCCGCT	0.677	41	61
RBM33	155435	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	155457901	155457901	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TAAGCCTGGCGCGGAACGGTC	0.453	47	79
MCPH1	79648	hgsc.bcm.edu;ucsc.edu	37	8	6479016	6479016	+	Silent	SNP	C	C	T	rs35999761	by1000genomes	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGCCGTACCGCGGAACCCTCT	0.617	32	51
DMTN	2039	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	21926949	21926949	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GACAGCCGGTCGCCTGGAATC	0.657	18	39
BMP1	649	hgsc.bcm.edu;broad.mit.edu	37	8	22037987	22037987	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTGTCACACCCGGGGAGAAGG	0.612	56	88
KIF13B	23303	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	28989840	28989840	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCGAAGACTACGTGTCTTTGC	0.388	34	81
HTRA4	203100	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	38840023	38840023	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCAGGAAAGGCGTTTTCAAAT	0.428	20	53
ANK1	286	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	41554024	41554024	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ACGTCCGTGGCGGGATCACCA	0.677	27	53
PI15	51050	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	75737579	75737579	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GACTCATCCCCGCCAACCAAT	0.478	57	98
RUNX1T1	862	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	92972726	92972726	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ACTCGCTTTACGGCCACAATT	0.458	25	43
COL22A1	169044	hgsc.bcm.edu;ucsc.edu	37	8	139890478	139890478	+	Missense_Mutation	SNP	C	C	A	rs149836216		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CACCCACTGCCGGACCTTCTC	0.647	5	7
AGO2	27161	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	141595388	141595388	+	Silent	SNP	C	C	T	rs141930048	byFrequency	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGATGGGGGGCGGCGGCGCAG	0.592	33	68
GPR20	2843	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	142367203	142367203	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CACGAGGCTCGTGTGGTGTGG	0.637	12	47
ARC	23237	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	143694472	143694472	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CACTGGCCACGGACTCGCTGT	0.701	12	13
ZFP41	286128	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	144332526	144332526	+	Silent	SNP	C	C	T	rs149671213		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGAAGCCCTACGAATGCACGC	0.592	40	116
ZFP41	286128	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	144332534	144332534	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TACGAATGCACGCACTGTGGG	0.592	42	116
PLEC	5339	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	144991396	144991396	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCGCCCGGAGCGGCGGTCGAT	0.637	24	48
PLEC	5339	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	144999421	144999421	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTGCCGCGCTCGCTCCACCTC	0.741	4	18
PARP10	84875	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	8	145058234	145058234	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGGTGTGGGCGTTGCCAGGGA	0.662	14	39
KDM4C	23081	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	6990511	6990511	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGCAGCAGGCGCCAAGTGATG	0.408	6	33
TRPM6	140803	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	77390827	77390827	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTTCTTGGTCGTGAGGAGCTC	0.537	70	117
SPATA31D1	389763	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	84607751	84607751	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TTGCATGGTCCGGAGACTTCT	0.478	49	102
KIF27	55582	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	86465050	86465050	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ATCTTTTGTTCGTGTTCCTTT	0.423	40	181
ZCCHC6	79670	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	88967854	88967854	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCATCCAAGCGGGTTGACTGT	0.433	97	208
SEMA4D	10507	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	91993634	91993634	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTCCATCTGCGTCTGAGTCAG	0.582	32	42
FGD3	89846	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	95738979	95738979	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ACAAGGATGCCGGCCTGGCCC	0.637	13	36
PTPN3	5774	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	112166752	112166752	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCACCGTCCCGCTTTCGAGGC	0.572	50	76
ZNF618	114991	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	116811427	116811427	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGACAGTGTACGTGACGGATT	0.612	31	236
PAPPA	5069	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	119097282	119097282	+	Silent	SNP	C	C	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCCTCCGTTCCTTCGACAACT	0.642	69	140
CDK5RAP2	55755	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	123215886	123215886	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTCAGCAGGTCGCCCTCCGTG	0.552	102	175
CDK5RAP2	55755	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	123253597	123253597	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GAAGCAACACGTCCTTCTGAT	0.294	19	36
CNTRL	11064	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	123858806	123858806	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AAAATCTTTGCGAGTCCTCAA	0.303	49	82
OR5C1	392391	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	125551233	125551233	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GAACCTCACCCGGGCCGCGGT	0.582	30	151
CRB2	286204	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	126128637	126128637	+	Missense_Mutation	SNP	G	G	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CGCTGCCTCTGTTGGCCAGGT	0.736	17	26
SH2D3C	10044	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	130511902	130511902	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGTGAGTCCCGGATGAGGAAG	0.612	7	15
TRUB2	26995	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	131072049	131072049	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GAAGCCGTCGCGCGTGCGCCG	0.582	27	55
SPTAN1	6709	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	131388869	131388869	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GAGCTGGACCGCCAGATCAAG	0.582	14	65
FIBCD1	84929	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	133780652	133780652	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCACGGTGAGCGGGTACCCGT	0.657	17	53
BRD3	8019	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	136910513	136910513	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AAGCCCTGTGCGTCTGGGTAC	0.592	45	257
NOTCH1	4851	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	139401406	139401406	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGTCGTCCACGTTGATCTCAC	0.672	16	26
CLIC3	9022	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	139889178	139889178	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGATCTCGGCGCTGTGCGGAC	0.677	22	26
TUBB4B	10383	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	140137526	140137526	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGCGCTGACCGTGCCCGAGCT	0.657	31	117
EHMT1	79813	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	140706066	140706066	+	Splice_Site	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CGACTGTGTCGTGTGAGTGCA	0.642	43	55
ASMTL	8623	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	1536976	1536976	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGGGTACTCACGGGCCAGCTC	0.612	16	49
FANCB	2187	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	14883271	14883271	+	Missense_Mutation	SNP	C	C	T	rs142289802	byFrequency	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AAAACTCAAACGCATTTCAAA	0.313	20	7
MAGEB6	158809	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	26212350	26212350	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGGCTGCCAACGGCCAAGATG	0.557	78	19
FAM47A	158724	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	34149532	34149532	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTGTGGGTTCGTCAGTTGTCT	0.577	13	30
RGN	9104	hgsc.bcm.edu;broad.mit.edu	37	X	46951573	46951573	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GATGGACCCCGAGGGTCTTTT	0.463	12	2
CACNA1F	778	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	49088267	49088267	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGGTTTCTTCGCTTAGGGGTC	0.652	7	18
ARHGEF9	23229	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	62857963	62857963	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGACTGGCTGCGCTTGGGTTC	0.493	8	17
ZMYM3	9203	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	70464210	70464210	+	Missense_Mutation	SNP	C	C	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TTGACTGCACCCAGCACTTCC	0.557	19	25
POF1B	79983	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	84563165	84563165	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGCTCCTCCCGTATGTTGCTA	0.358	54	12
IL1RAPL2	26280	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	104999270	104999270	+	Missense_Mutation	SNP	T	T	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTTGAAGTACTGCCAGATGTC	0.378	34	112
MST4	51765	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	131208175	131208175	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTTCAGCAGACGAATCCCCCT	0.363	148	23
GDI1	2664	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	X	153670771	153670771	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGTTGTGAGAGCCAGGTAAGC	0.612	133	34
DYSF	8291	broad.mit.edu;ucsc.edu	37	2	71753455	71753455	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GAAGGTCTTCCGGGCCGAGGA	0.672	84	255
PTPRS	5802	broad.mit.edu;ucsc.edu	37	19	5244109	5244109	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCGGTAGCCGCGGATCAGGCC	0.682	36	174
ADAMTSL3	57188	broad.mit.edu;ucsc.edu	37	15	84651306	84651306	+	Missense_Mutation	SNP	G	G	A	rs150618994		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGCTGCCCCCGACATCGGCGT	0.567	72	120
ZFYVE19	84936	broad.mit.edu;ucsc.edu	37	15	41102150	41102150	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGCACGACTCCGCCAGGAGAA	0.602	45	74
PAPLN	89932	broad.mit.edu;ucsc.edu	37	14	73726060	73726060	+	Missense_Mutation	SNP	G	G	A	rs151048072		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCCCAGGGGCGACCAAGGCAC	0.672	57	30
PTPRD	5789	broad.mit.edu;ucsc.edu	37	9	8636794	8636794	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GAGGCAACTCCGCCAGAGACC	0.413	51	101
XPOT	11260	broad.mit.edu;ucsc.edu	37	12	64811871	64811871	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TTAGGGAGACGCTCATATCAT	0.323	35	79
PCSK7	9159	broad.mit.edu;ucsc.edu	37	11	117100140	117100140	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGGACGCTGCGCTTGGCCCGC	0.617	50	182
ALMS1	7840	broad.mit.edu;ucsc.edu	37	2	73717091	73717091	+	Nonsense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CAAAGGTCTTCGAATGCCATT	0.378	94	178
LRRK1	79705	broad.mit.edu;ucsc.edu	37	15	101567987	101567987	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CAAGGACTACGAGGACCTGCA	0.617	4	10
FBN3	84467	broad.mit.edu;ucsc.edu	37	19	8201185	8201185	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTGGTGCATTCGTCTACATCT	0.677	37	106
SNHG14	104472715	broad.mit.edu;ucsc.edu	37	15	25331678	25331678	+	RNA	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTGCGTGGATCGATGATGACT	0.453	49	207
ADRBK2	157	broad.mit.edu;ucsc.edu	37	22	26118335	26118335	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CGTCGTGCCCCGAAGTTCCTC	0.542	38	135
C9orf152	0	broad.mit.edu;ucsc.edu	37	9	112963591	112963591	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCTCCAGGTGCGTGTGCCATG	0.587	22	142
GGT6	124975	broad.mit.edu;ucsc.edu	37	17	4461802	4461802	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGGGCGCCCCGGAGCGCAGGG	0.692	3	13
ANK1	286	broad.mit.edu;ucsc.edu	37	8	41577305	41577305	+	Silent	SNP	G	G	A	rs61758867	byFrequency	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCTCTGCGTCGTATTGCAACA	0.567	53	109
TAF4	6874	broad.mit.edu;ucsc.edu	37	20	60574065	60574065	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGGATCTCCCGCTCCTGCTCA	0.557	177	284
TRPM6	140803	broad.mit.edu;ucsc.edu	37	9	77376996	77376996	+	Missense_Mutation	SNP	G	G	A	rs141526694	byFrequency	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTGTATCTGCGGAGAGGATTG	0.423	42	73
FBXW12	285231	broad.mit.edu;ucsc.edu	37	3	48422276	48422276	+	Missense_Mutation	SNP	G	G	A	rs144607752	byFrequency	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ATGTGCCAGCGCCTGCTGGAC	0.443	115	37
ZNF687	57592	broad.mit.edu;ucsc.edu	37	1	151261051	151261051	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCAGCTTCAGCGCCCACCAGC	0.572	52	120
CELSR1	9620	broad.mit.edu;ucsc.edu	37	22	46776725	46776725	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGCTTGGTTCGCTCCTCCACC	0.667	23	105
ZFYVE28	57732	broad.mit.edu;ucsc.edu	37	4	2306942	2306942	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGCTGCCCTCCGCTCCTGGCC	0.667	48	86
HEPH	9843	broad.mit.edu;ucsc.edu	37	X	65427138	65427138	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGGATCCCTCGGCCAAGGACT	0.478	5	18
LPAR3	23566	broad.mit.edu;ucsc.edu	37	1	85331490	85331490	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AAGCCCCTGACGGAGAAACCA	0.502	157	220
AP5Z1	9907	broad.mit.edu;ucsc.edu	37	7	4824642	4824642	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGGTGGCCTTCGAGTACTGCC	0.682	46	69
LPCAT2	54947	broad.mit.edu;ucsc.edu	37	16	55613052	55613052	+	Missense_Mutation	SNP	C	C	T	rs142090669	byFrequency	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGCTACATAACGGAGGAAGAG	0.433	19	138
PITPNM2	57605	broad.mit.edu;ucsc.edu	37	12	123479976	123479976	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTATCCAGCTCGTAGGTGGAT	0.647	27	128
ODC1	4953	broad.mit.edu;ucsc.edu	37	2	10582006	10582006	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ATCCATAGACGCCATCATTCA	0.378	35	253
CACNA1H	8912	broad.mit.edu;ucsc.edu	37	16	1250283	1250283	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCCTGCGGCCGTACTACCAGA	0.632	3	27
DHX37	57647	broad.mit.edu;ucsc.edu	37	12	125434988	125434988	+	Missense_Mutation	SNP	C	C	T	rs146274723	byFrequency	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ACACAGCACCCGCCCCCGCTC	0.657	27	34
KDM1A	23028	broad.mit.edu;ucsc.edu	37	1	23405541	23405541	+	Silent	SNP	C	C	T	rs145299191		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TTTATAAATGCGACGCAGTTC	0.507	40	214
DGKK	139189	broad.mit.edu;ucsc.edu	37	X	50147116	50147116	+	RNA	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGCTGGGTCCGGTGGCTGTAA	0.438	19	9
KIAA0430	9665	broad.mit.edu;ucsc.edu	37	16	15711316	15711316	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CACACCAGCCGTCCGTTTCCT	0.512	17	57
PRSS55	203074	broad.mit.edu;ucsc.edu	37	8	10383214	10383214	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGAGCCCACCGCCCTCAGCCC	0.662	13	23
NPR3	4883	broad.mit.edu;ucsc.edu	37	5	32739001	32739001	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GAGACAAACACGACTTTGAAG	0.428	51	96
USP20	10868	broad.mit.edu;ucsc.edu	37	9	132631191	132631191	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTGCAGCCCCGTCCACCACCA	0.672	17	101
IBA57	200205	broad.mit.edu;ucsc.edu	37	1	228362946	228362946	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTGACGGCCCGCACCCACCAC	0.647	25	178
SSMEM1	136263	broad.mit.edu;ucsc.edu	37	7	129856218	129856218	+	Nonsense_Mutation	SNP	C	C	T	rs146470357		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCACCATTCCCGACAGAAGCC	0.438	120	201
ZNF416	55659	broad.mit.edu;ucsc.edu	37	19	58084870	58084870	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGTGAAAGACCGCACATGCCC	0.502	13	50
USP32	84669	broad.mit.edu;ucsc.edu	37	17	58259033	58259033	+	Silent	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCCCCAAAGTCCGTGGGCTGC	0.483	14	55
CXXC11	285093	broad.mit.edu;ucsc.edu	37	2	242815361	242815361	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTCCATGACCGTGTGCGTCTT	0.662	105	226
C6	729	broad.mit.edu;ucsc.edu	37	5	41159281	41159281	+	Nonsense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TTGCATTCTCGGGTTCTCGAT	0.493	56	83
GPER	2852	broad.mit.edu;ucsc.edu	37	7	1132151	1132151	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CATGATCCTCGCGGTGGTGCT	0.687	51	97
OR51G1	79324	broad.mit.edu;ucsc.edu	37	11	4944910	4944910	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGATGAGGGCGTATGAGAGAA	0.547	26	90
TUBGCP2	10844	broad.mit.edu;ucsc.edu	37	10	135101799	135101799	+	Missense_Mutation	SNP	T	T	C			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CATGAGGAAGTAGCGCTTGAT	0.682	15	55
TENM2	57451	broad.mit.edu;ucsc.edu	37	5	167689238	167689238	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CGGGTGACCACGGGCGTGTCC	0.572	3	11
TMEM156	80008	broad.mit.edu;ucsc.edu	37	4	38990512	38990512	+	Missense_Mutation	SNP	C	C	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AAGTATTTTGCGGATAGTGAG	0.358	85	160
RP11-468E2.4	0	broad.mit.edu;ucsc.edu	37	14	24629769	24629769	+	Missense_Mutation	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGTATCCCCCGCAGGCGGAAG	0.562	23	16
SMYD1	150572	broad.mit.edu;ucsc.edu	37	2	88387390	88387390	+	Silent	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGCTGGCGGCGCGCATCATGT	0.607	14	19
TYW1B	441250	broad.mit.edu;ucsc.edu	37	7	72281140	72281140	+	RNA	SNP	G	G	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TTGCCAAATCGAAAATCAATG	0.448	100	141
CLIC4	25932	broad.mit.edu;hgsc.bcm.edu	37	1	25167273	25167273	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGTGGTGGCCAAAAAATATCG	0.373	63	108
RNF220	55182	broad.mit.edu;hgsc.bcm.edu	37	1	45110396	45110397	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTGCAGCGGCAAAGAGAACCCG	0.599	49	114
DBT	1629	broad.mit.edu;hgsc.bcm.edu	37	1	100684291	100684293	+	In_Frame_Del	DEL	TCT	TCT	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TTCAACAACATCTTCTTCTGAAT	0.384	69	135
LCE1A	353131	broad.mit.edu;hgsc.bcm.edu	37	1	152800020	152800020	+	Frame_Shift_Del	DEL	C	C	-	rs4990424		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ctcccaagtgccccactccta	0.652	41	151
DISP1	84976	broad.mit.edu;hgsc.bcm.edu	37	1	223176292	223176293	+	Frame_Shift_Del	DEL	TG	TG	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTTTTAGTTATGTGTGTCTACA	0.361	30	142
PFN4	375189	broad.mit.edu;hgsc.bcm.edu	37	2	24344101	24344103	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AAATACAGTCCTTCTCTTCGGGC	0.453	93	102
VPS54	51542	broad.mit.edu;hgsc.bcm.edu	37	2	64199337	64199339	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGGTATCTTTAGGAGGACAAATA	0.286	14	46
FAHD2B	151313	broad.mit.edu;hgsc.bcm.edu	37	2	97749725	97749725	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ACCGACACCTGGGGGGGTCCC	0.552	16	53
POTEF	728378	broad.mit.edu;hgsc.bcm.edu	37	2	130872806	130872806	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGCTGTCCTCTTTTTGTTGTC	0.403	34	143
POTEE	445582	broad.mit.edu;hgsc.bcm.edu	37	2	132021077	132021078	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TTGAAAGTGTGAAAAAAAAGAA	0.416	19	42
TTN	7273	broad.mit.edu;hgsc.bcm.edu	37	2	179598102	179598102	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TTATTCGGTATTTTTTACTGG	0.468	86	108
HTR2B	3357	broad.mit.edu;hgsc.bcm.edu	37	2	231973400	231973401	+	Frame_Shift_Del	DEL	TT	TT	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTTGAAAAACTTAGAGTTCTCT	0.426	34	68
SLC9C1	285335	broad.mit.edu;hgsc.bcm.edu	37	3	112005610	112005610	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTCAGTACTGAAAAAAAACTC	0.353	12	33
ZBTB20	26137	broad.mit.edu;hgsc.bcm.edu	37	3	114058003	114058003	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGTGCCTGCAGGGGGGGTCCC	0.632	88	28
NPHP3	27031	broad.mit.edu;hgsc.bcm.edu	37	3	132403500	132403502	+	In_Frame_Del	DEL	TTC	TTC	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TTTCATAAAGTTCTTCTGCTTTA	0.419	40	20
CDH10	1008	broad.mit.edu;hgsc.bcm.edu	37	5	24491704	24491706	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGATGATGCAGAGGAGGATGGCG	0.483	55	109
PPIP5K2	23262	broad.mit.edu;hgsc.bcm.edu	37	5	102537324	102537324	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AAACACTGGGAAAAAGAAATG	0.313	13	15
MCC	4163	broad.mit.edu;hgsc.bcm.edu	37	5	112363035	112363037	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCCTGGAGTTCTCCTCCTCTAGC	0.507	52	89
KDM3B	51780	broad.mit.edu;hgsc.bcm.edu	37	5	137721747	137721749	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TTCCAAAGGAAAGAAGAAGAGAG	0.419	65	142
PSD2	84249	broad.mit.edu;hgsc.bcm.edu	37	5	139189297	139189298	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AACATTCTGGAAGATTCAGCGG	0.619	77	148
PCDHA12	56137	broad.mit.edu;hgsc.bcm.edu	37	5	140255597	140255601	+	Frame_Shift_Del	DEL	TAAAA	TAAAA	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ATTTTGAGCTTAAAATAAAAACAAA	0.366	20	81
HIGD2A	192286	broad.mit.edu;hgsc.bcm.edu	37	5	175815916	175815917	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ACAGGAATCCAGAGAGTTTCAA	0.564	94	153
SNAP91	9892	broad.mit.edu;hgsc.bcm.edu	37	6	84417562	84417563	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGAGTAGTGGCTTTGCAGACCG	0.559	98	59
FKBP9	11328	broad.mit.edu;hgsc.bcm.edu	37	7	33014804	33014804	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTGGTGTGATCCCCCCCAATT	0.443	34	72
MCM7	4176	broad.mit.edu;hgsc.bcm.edu	37	7	99690987	99690989	+	In_Frame_Del	DEL	TCT	TCT	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TTCATTCACATCTTCTTTCTCCA	0.527	107	207
SLC13A4	26266	broad.mit.edu;hgsc.bcm.edu	37	7	135375977	135375977	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGCATAGCCTCCCCCAACCAG	0.507	36	62
SLC4A2	6522	broad.mit.edu;hgsc.bcm.edu	37	7	150761737	150761737	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GAGCCTCCCCGACTGGAGAAA	0.687	35	60
CLU	1191	broad.mit.edu;hgsc.bcm.edu	37	8	27468075	27468076	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AAACAGCAGCAGAGTCTTCATC	0.584	28	40
MTFR1	9650	broad.mit.edu;hgsc.bcm.edu	37	8	66620197	66620197	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GATGAAGTTGAAAAAGGAATT	0.443	43	124
VPS13B	157680	broad.mit.edu;hgsc.bcm.edu	37	8	100796702	100796702	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CAAATCCCCACAGGTATTTGA	0.468	39	69
TBC1D31	93594	broad.mit.edu;hgsc.bcm.edu	37	8	124105886	124105886	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GATAATTCCATTTTTGCCTGG	0.348	18	42
RGS3	5998	broad.mit.edu;hgsc.bcm.edu	37	9	116246504	116246506	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCCACGAGCACTTCTTCTTGTAA	0.473	38	77
PPP1R26	9858	broad.mit.edu;hgsc.bcm.edu	37	9	138379043	138379043	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CAGAGGGCCAGGGGGGTCCCA	0.701	71	135
TAF3	83860	broad.mit.edu;hgsc.bcm.edu	37	10	8007427	8007427	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGCCCCAGCACCCCCACTGGT	0.488	61	83
SVIL	6840	broad.mit.edu;hgsc.bcm.edu	37	10	29760116	29760116	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCACCACCATCCCCCCCTGGA	0.527	16	20
SVIL	6840	broad.mit.edu;hgsc.bcm.edu	37	10	29822002	29822004	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	tctccttccccttcttcttcttc	0.498	12	48
SLK	9748	broad.mit.edu;hgsc.bcm.edu	37	10	105727509	105727511	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GAAAAATGTCCTTCTTCAATTTC	0.483	41	156
PWWP2B	170394	broad.mit.edu;hgsc.bcm.edu	37	10	134218375	134218375	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TTCGAAGGCGCCCCCTTCCCT	0.751	11	29
TUBGCP2	10844	broad.mit.edu;hgsc.bcm.edu	37	10	135103416	135103418	+	In_Frame_Del	DEL	GTT	GTT	-	rs141945979	byFrequency	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGTACTTGTCGTTGTAATCCTCC	0.581	15	73
QSER1	79832	broad.mit.edu;hgsc.bcm.edu	37	11	32997894	32997895	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTTCGGTGCAGAAAAAAAATGA	0.292	20	44
HIPK3	10114	broad.mit.edu;hgsc.bcm.edu	37	11	33308890	33308891	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCACTGCACTGAAAAAATTGAA	0.391	34	169
MTA2	9219	broad.mit.edu;hgsc.bcm.edu	37	11	62362913	62362916	+	Frame_Shift_Del	DEL	GAGA	GAGA	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTTGTGTAAGGAGAGAGACTTTGA	0.51	36	157
RCE1	9986	broad.mit.edu;hgsc.bcm.edu	37	11	66612694	66612696	+	In_Frame_Del	DEL	TCT	TCT	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTGGGGAACATCTTCTTGTCTGC	0.527	30	51
TBX10	347853	broad.mit.edu;hgsc.bcm.edu	37	11	67402373	67402373	+	Frame_Shift_Del	DEL	G	G	-	rs144542807		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCACCTGGAAGGGGGGGAACA	0.677	43	58
PCF11	51585	broad.mit.edu;hgsc.bcm.edu	37	11	82877339	82877340	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TCAGAAAAACAGGGGACAAAAC	0.411	11	18
CACNB3	784	broad.mit.edu;hgsc.bcm.edu	37	12	49221502	49221504	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCCGCCACCTGGAGGAGGACTAT	0.631	33	148
OAS1	4938	broad.mit.edu;hgsc.bcm.edu	37	12	113354493	113354494	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ATTATGACTTTAAAAACCCCAT	0.431	78	123
GPATCH2L	55668	broad.mit.edu;hgsc.bcm.edu	37	14	76668169	76668173	+	Frame_Shift_Del	DEL	AAGAA	AAGAA	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AAAATGCCACAAGAAAAGAGCCCTG	0.488	40	48
UNC79	57578	broad.mit.edu;hgsc.bcm.edu	37	14	93963615	93963615	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGCGAGTACAGGGGGTTGCAG	0.493	28	16
ZNF770	54989	broad.mit.edu;hgsc.bcm.edu	37	15	35274621	35274621	+	Frame_Shift_Del	DEL	T	T	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TTGGCCAAGATTTTTTTAACA	0.328	11	26
TSR3	115939	broad.mit.edu;hgsc.bcm.edu	37	16	1400178	1400180	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTTCAGGTCCAAGAAGCCCTTGC	0.591	21	44
FAM65A	79567	broad.mit.edu;hgsc.bcm.edu	37	16	67572573	67572575	+	Splice_Site	DEL	AGG	AGG	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCTCTCCTTCAGGAGTTTCCCGG	0.66	87	90
ATMIN	23300	broad.mit.edu;hgsc.bcm.edu	37	16	81076800	81076801	+	Frame_Shift_Del	DEL	TG	TG	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AATGGAAAACTGTGCACAAAAC	0.376	22	67
GPS2	2874	broad.mit.edu;hgsc.bcm.edu	37	17	7216932	7216935	+	Frame_Shift_Del	DEL	AGTG	AGTG	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTGGGCCCATAGTGAGGTGGGGGC	0.574	103	38
ALDH3A1	218	broad.mit.edu;hgsc.bcm.edu	37	17	19641649	19641649	+	Frame_Shift_Del	DEL	G	G	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGCCGGGCTCGGGGGGTATCT	0.627	139	67
NF1	4763	broad.mit.edu;hgsc.bcm.edu	37	17	29562657	29562660	+	Frame_Shift_Del	DEL	TGTT	TGTT	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CTGGTTACTCTGTTTGATTCTCGG	0.412	236	86
FBXL20	84961	broad.mit.edu;hgsc.bcm.edu	37	17	37420470	37420471	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCTGGCAGTCATAGAGTTCTAT	0.48	166	77
PLEKHH3	79990	broad.mit.edu;hgsc.bcm.edu	37	17	40820242	40820244	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GTCTTGGCATGGAGGAGAAGAGC	0.65	40	15
ADNP2	22850	broad.mit.edu;hgsc.bcm.edu	37	18	77896426	77896426	+	Frame_Shift_Del	DEL	A	A	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ATTAGATCCTAAAAAATATGA	0.358	34	29
MCOLN1	57192	broad.mit.edu;hgsc.bcm.edu	37	19	7594070	7594072	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCTACCTGACCTTCTTCCACAAC	0.581	21	82
SALL4	57167	broad.mit.edu;hgsc.bcm.edu	37	20	50400983	50400983	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGGGTAGGAACCCCCCCACTC	0.562	24	115
ZNF831	128611	broad.mit.edu;hgsc.bcm.edu	37	20	57769140	57769140	+	Frame_Shift_Del	DEL	G	G	-	rs55786258	by1000genomes	TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGGCACAGTTGGGGGGGGACA	0.682	18	56
DIP2A	23181	broad.mit.edu;hgsc.bcm.edu	37	21	47954526	47954527	+	Frame_Shift_Ins	INS	-	-	G			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GGCAGTACGGTGGGGGTCACAG	0.535	26	31
SHROOM2	357	broad.mit.edu;hgsc.bcm.edu	37	X	9900853	9900853	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	CCCCAGTTCGCCCCCCAGAAA	0.627	23	42
ACOT9	23597	broad.mit.edu;hgsc.bcm.edu	37	X	23723697	23723698	+	Frame_Shift_Ins	INS	-	-	A			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGATCCGATTGAAAATGTTCCG	0.401	97	36
POU3F4	5456	broad.mit.edu;hgsc.bcm.edu	37	X	82764415	82764418	+	Frame_Shift_Del	DEL	CTGA	CTGA	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	GCCATGATCTCTGACTGGAGGAAG	0.485	12	5
SLC6A14	11254	broad.mit.edu;hgsc.bcm.edu	37	X	115582769	115582770	+	Frame_Shift_Ins	INS	-	-	T			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGGATTTGCTATTTTTTCTATA	0.332	157	48
USP26	83844	broad.mit.edu;hgsc.bcm.edu	37	X	132161205	132161205	+	Frame_Shift_Del	DEL	A	A	-	rs61758857		TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGGTATCTTTAAAAAAAAGTA	0.388	84	36
ATP11C	286410	broad.mit.edu;hgsc.bcm.edu	37	X	138869332	138869334	+	Splice_Site	DEL	TCT	TCT	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	AGCTACTTACTCTTCTATTTCTT	0.345	28	14
FAM50A	9130	broad.mit.edu;hgsc.bcm.edu	37	X	153678435	153678437	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	ACGCCACTGTGGAGAAGGATGAG	0.616	93	63
ARID1A	8289	broad.mit.edu	37	1	27088659	27088659	+	Frame_Shift_Del	DEL	C	C	-			TCGA-HT-8564-01A-11D-2395-08	TCGA-HT-8564-10A-01D-2396-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f41cf33f-58da-40f9-890d-cec026fe2f70	7bdf8707-ae9f-433e-837e-789e5883a173	TGCAGAGGAACCCCCAGATGC	0.512	13	225
