Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	Algorithm
KRTAP9-1	728318	hgsc.bcm.edu	37	17	39346593	39346595	+	In_Frame_Del	DEL	CCT	CCT	-	rs377187211	bycluster	TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	CCT	CCT	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	KRTAP9-1_ENST00000398470,colon,carcinoma,0,2	KRTAP9-1	NM_001190460	exon1	c.454_456del	p.152_152del	.	.	98.0	28.0	65.0	0.0	.	34	.	Atlas-Indel
DHFRL1	200895	hgsc.bcm.edu	37	3	93779801	93779803	+	In_Frame_Del	DEL	CTT	CTT	-	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	CTT	CTT	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	.	DHFRL1	NM_001195643	exon2	c.554_556del	p.185_186del	.	.	93.0	10.0	98.0	0.0	.	25	.	Atlas-Indel
ZNF567	163081	hgsc.bcm.edu	37	19	37211070	37211071	+	Frame_Shift_Del	DEL	TG	TG	-	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	TG	TG	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	.	ZNF567	NM_152603	exon4	c.1350_1351del	p.450_451del	.	.	133.0	19.0	124.0	0.0	.	61	.	Atlas-Indel
FAM214B	80256	hgsc.bcm.edu	37	9	35106621	35106621	+	Missense_Mutation	SNP	G	G	A	rs373199885		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	KIAA1539,NS,carcinoma,+1,1	KIAA1539	NM_025182	exon5	c.C973T	p.R325W	CCTTCCGGAGGCT	.	66.0	3.0	42.0	0.0	.	+1	1	Atlas-SNP
UBB	7314	hgsc.bcm.edu	37	17	16285479	16285479	+	Silent	SNP	C	C	G	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	.	.	NM_018955	exon2	c.C258G	p.G86G	GACCGGCAAGACC	.	106.0	13.0	95.0	0.0	.	.	.	Atlas-SNP
CCDC152	100129792	hgsc.bcm.edu	37	5	42799496	42799496	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	.	.	NM_001134848	exon8	c.G578C	p.R193T	TAGCAAGAGTTCA	.	145.0	26.0	198.0	0.0	.	.	.	Atlas-SNP
FMNL2	114793	hgsc.bcm.edu	37	2	153476069	153476069	+	Silent	SNP	C	C	A	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	FMNL2,rectum,carcinoma,0,2	FMNL2	NM_052905	exon15	c.C1674A	p.P558P	GCCGCCCCCTCCT	.	60.0	16.0	60.0	0.0	.	0	2	Atlas-SNP
KAT6B	23522	hgsc.bcm.edu	37	10	76781908	76781908	+	Silent	SNP	A	A	G	rs79644703		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	MYST4,colon,carcinoma,0,18	MYST4	NM_012330	exon16	c.A3291G	p.E1097E	AGAGGAAGAAGAA	.	35.0	6.0	37.0	2.0	1.000	0	18	Atlas-SNP
BTN2A3P	54718	hgsc.bcm.edu	37	6	26422353	26422353	+	RNA	SNP	C	C	T	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	BTN2A3,NS,carcinoma,0,9	BTN2A3	.	.	.	.	ATGGAACCAGCTG	.	73.0	5.0	47.0	0.0	.	0	9	Atlas-SNP
MST1P2	11209	hgsc.bcm.edu	37	1	16974458	16974458	+	RNA	SNP	G	G	C	rs57783259		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	.	.	.	.	.	.	GGTGGGGGGGCGG	.	484.0	29.0	244.0	0.0	.	.	.	Atlas-SNP
KRT73	319101	hgsc.bcm.edu	37	12	53002138	53002138	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	.	.	NM_175068	exon9	c.G1465A	p.G489R	AGCCCCCGCTGAC	.	112.0	14.0	52.0	0.0	.	.	.	Atlas-SNP
OR2T4	127074	hgsc.bcm.edu	37	1	248525639	248525639	+	Missense_Mutation	SNP	A	A	C	rs76878172	alternate_allele	TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	OR2T4,brain,glioma,0,1	OR2T4	NM_001004696	exon1	c.A757C	p.I253L	TTACTCATCCTCC	.	648.0	32.0	453.0	1.0	.	0	1	Atlas-SNP
ZNF99	7652	hgsc.bcm.edu	37	19	22940462	22940462	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	ZNF99,colon,carcinoma,+1,1	ZNF99	NM_001080409	exon4	c.T2249G	p.V750G	TTATGTACAGTAA	.	54.0	4.0	34.0	1.0	.	+1	1	Atlas-SNP
TTN	7273	hgsc.bcm.edu	37	2	179399008	179399008	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	.	.	NM_001267550	exon358	c.T102334A	p.S34112T	CACAGGAGATCCG	.	181.0	53.0	131.0	0.0	.	.	.	Atlas-SNP
C17orf98	388381	hgsc.bcm.edu	37	17	36997456	36997456	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	.	.	NM_001080465	exon1	c.C187T	p.L63F	GCAAAAGGGGCGG	.	111.0	18.0	59.0	0.0	.	.	.	Atlas-SNP
SUPT20HL1	100130302	hgsc.bcm.edu	37	X	24382423	24382423	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	.	.	NM_001136234	exon1	c.G1546C	p.A516P	GCTGCTGCTGCTC	.	160.0	9.0	71.0	0.0	.	.	.	Atlas-SNP
COL22A1	169044	hgsc.bcm.edu	37	8	139629170	139629170	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	COL22A1,right_upper_lobe,carcinoma,-1,1	COL22A1	NM_152888	exon54	c.C3857T	p.A1286V	CCGGGTGCACCAG	.	91.0	17.0	88.0	0.0	.	-1	1	Atlas-SNP
ZNF99	7652	hgsc.bcm.edu	37	19	22940463	22940463	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	ZNF99,colon,carcinoma,+2,1	ZNF99	NM_001080409	exon4	c.G2248A	p.V750I	TATGTACAGTAAG	.	54.0	4.0	34.0	1.0	.	+2	1	Atlas-SNP
AR	367	hgsc.bcm.edu	37	X	66765222	66765222	+	Silent	SNP	G	G	A	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	.	.	NM_000044	exon1	c.G234A	p.Q78Q	GCAGCAGCAGCAA	.	139.0	8.0	104.0	0.0	.	.	.	Atlas-SNP
ANO7	50636	hgsc.bcm.edu	37	2	242163124	242163124	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	ANO7,colon,carcinoma,+1,1	ANO7	NM_001001891	exon23	c.C2622G	p.D874E	GCCTGACATCCCA	.	212.0	50.0	129.0	0.0	.	+1	1	Atlas-SNP
UBR4	23352	hgsc.bcm.edu	37	1	19483407	19483407	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	.	.	NM_020765	exon41	c.C5773T	p.Q1925X	AGAGCTGCAGAAC	.	292.0	43.0	226.0	0.0	.	.	.	Atlas-SNP
MORC3	23515	hgsc.bcm.edu	37	21	37705948	37705948	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	.	.	NM_015358	exon2	c.G44T	p.C15F	AGCTTTGCCCGAA	.	155.0	20.0	103.0	0.0	.	.	.	Atlas-SNP
PNPLA6	10908	hgsc.bcm.edu	37	19	7615464	7615464	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	.	.	NM_001166111	exon18	c.C2035T	p.Q679X	GTGATCCAGCGAG	.	160.0	20.0	74.0	0.0	.	.	.	Atlas-SNP
KRTAP9-1	728318	hgsc.bcm.edu	37	17	39346622	39346622	+	Missense_Mutation	SNP	T	T	A	rs79470847	bycluster	TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	KRTAP9-1_ENST00000398470,caecum,carcinoma,0,2	KRTAP9-1_ENST00000398470	NM_001190460	exon1	c.T484A	p.C162S	CAGCCTTGCTGCC	.	104.0	40.0	49.0	0.0	0.500	0	2	Atlas-SNP
NF1	4763	hgsc.bcm.edu	37	17	29496939	29496939	+	Silent	SNP	C	C	T	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	.	.	NM_001128147	exon5	c.C510T	p.D170D	AGAAGACAATGTT	.	96.0	13.0	93.0	0.0	.	.	.	Atlas-SNP
ODF2	4957	hgsc.bcm.edu	37	9	131262420	131262420	+	Silent	SNP	C	C	T	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	.	.	NM_153435	exon21	c.C2568T	p.S856S	CCGCAGCATGCAG	.	119.0	37.0	84.0	0.0	.	.	.	Atlas-SNP
EP400	57634	hgsc.bcm.edu	37	12	132547084	132547084	+	Silent	SNP	G	G	A	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	.	.	NM_015409	exon47	c.G8172A	p.Q2724Q	GCAGCAGCAGCAA	.	174.0	9.0	90.0	0.0	.	.	.	Atlas-SNP
COL18A1	80781	hgsc.bcm.edu	37	21	46909431	46909431	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	.	.	NM_030582	exon18	c.C2495T	p.A832V	CGGGGGCGAAGGT	.	126.0	14.0	56.0	0.0	.	.	.	Atlas-SNP
LINC00467	84791	hgsc.bcm.edu	37	1	211591127	211591127	+	RNA	SNP	A	A	G	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	.	.	.	.	.	.	GCGGCAATGAGGG	.	396.0	66.0	246.0	0.0	.	.	.	Atlas-SNP
OTX2	5015	hgsc.bcm.edu	37	14	57271040	57271040	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	.	.	NM_001270525	exon2	c.C139T	p.R47C	CCCGGCGCTGTTT	.	191.0	31.0	109.0	0.0	.	.	.	Atlas-SNP
KRTAP9-1	728318	hgsc.bcm.edu	37	17	39346591	39346591	+	Silent	SNP	C	C	T	rs76923645		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	KRTAP9-1_ENST00000398470,caecum,carcinoma,0,2	KRTAP9-1_ENST00000398470	NM_001190460	exon1	c.C453T	p.P151P	CCAGCCCACCTGC	.	97.0	28.0	61.0	0.0	0.500	0	2	Atlas-SNP
AR	367	hgsc.bcm.edu	37	X	66765223	66765223	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	.	.	NM_000044	exon1	c.C235G	p.Q79E	CAGCAGCAGCAAG	.	144.0	8.0	107.0	0.0	.	.	.	Atlas-SNP
KCNS1	3787	hgsc.bcm.edu	37	20	43726455	43726455	+	Silent	SNP	G	G	A	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	.	.	NM_002251	exon4	c.C958T	p.L320L	CCAGCAGCGTGAG	.	62.0	16.0	39.0	0.0	.	.	.	Atlas-SNP
POPDC3	64208	hgsc.bcm.edu	37	6	105609640	105609640	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	.	.	NM_022361	exon2	c.G145A	p.G49R	GGAGCCCGAAGAA	.	157.0	21.0	147.0	0.0	.	.	.	Atlas-SNP
HIST1H3C	8352	hgsc.bcm.edu	37	6	26045698	26045698	+	Silent	SNP	G	G	A	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	.	.	NM_003531	exon1	c.G60A	p.Q20Q	CAAGCAGCTTGCT	.	165.0	33.0	103.0	0.0	.	.	.	Atlas-SNP
CARD10	29775	hgsc.bcm.edu	37	22	37912055	37912055	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	.	.	NM_014550	exon3	c.G624T	p.M208I	GGCGATCATGTAG	.	224.0	31.0	117.0	0.0	.	.	.	Atlas-SNP
EPHB4	2050	hgsc.bcm.edu	37	7	100419938	100419938	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	.	.	NM_004444	exon4	c.T763G	p.C255G	GAGCACAGCTGCA	.	126.0	15.0	47.0	0.0	.	.	.	Atlas-SNP
OR2T4	127074	hgsc.bcm.edu	37	1	248525640	248525640	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	OR2T4,brain,glioma,+1,1	OR2T4	NM_001004696	exon1	c.T758C	p.I253T	TACTCATCCTCCT	.	60.0	19.0	8.0	0.0	.	+1	1	Atlas-SNP
GGA3	23163	hgsc.bcm.edu	37	17	73237088	73237088	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	.	.	NM_138619	exon11	c.G997T	p.D333Y	TCGTGTCCAGCTC	.	176.0	20.0	112.0	0.0	.	.	.	Atlas-SNP
FRG1B	284802	hgsc.bcm.edu	37	20	29625928	29625928	+	RNA	SNP	G	G	C	novel		TCGA-2G-AAFH-01A-12D-A42Y-10	TCGA-2G-AAFH-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	258cf1c4-41c5-4e54-ad57-0961483d99ba	bb501e72-c643-4afb-b1e8-56593b08cb2f	.	.	.	.	.	.	GAACTTGTTGGGC	.	123.0	6.0	138.0	0.0	.	.	.	Atlas-SNP
