Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	Algorithm
ARHGAP39	80728	hgsc.bcm.edu	37	8	145806589	145806590	+	Frame_Shift_Ins	INS	-	-	CACTCACC	novel		TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	-	-	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	.	ARHGAP39	NM_025251	exon4	c.153_154insGGTGAGTG	p.C51fs	.	.	214.0	18.0	160.0	0.0	.	80	.	Atlas-Indel
KRTAP9-1	728318	hgsc.bcm.edu	37	17	39346593	39346595	+	In_Frame_Del	DEL	CCT	CCT	-	rs377187211	bycluster	TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	CCT	CCT	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	KRTAP9-1_ENST00000398470,colon,carcinoma,0,2	KRTAP9-1	NM_001190460	exon1	c.454_456del	p.152_152del	.	.	83.0	29.0	61.0	0.0	.	34	.	Atlas-Indel
WNT5A	7474	hgsc.bcm.edu	37	3	55504144	55504144	+	Silent	SNP	G	G	A	novel		TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	WNT5A,NS,carcinoma,0,1	WNT5A	NM_003392	exon5	c.C1119T	p.I373I	GTCCACGATCTCC	.	150.0	19.0	135.0	0.0	.	0	1	Atlas-SNP
NRD1	4898	hgsc.bcm.edu	37	1	52306066	52306066	+	Missense_Mutation	SNP	T	T	A	rs72663147	bycluster	TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	NRD1,NS,other,0,1	NRD1	NM_001101662	exon2	c.A462T	p.E154D	ATCATCTTCTTCT	.	80.0	15.0	36.0	1.0	.	0	1	Atlas-SNP
MN1	4330	hgsc.bcm.edu	37	22	28193690	28193690	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	.	.	NM_002430	exon1	c.A2842G	p.R948G	TGTCCCTTTTTCT	.	73.0	4.0	101.0	0.0	.	.	.	Atlas-SNP
MFSD2B	388931	hgsc.bcm.edu	37	2	24246462	24246462	+	Silent	SNP	G	G	A	novel		TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	.	.	NM_001080473	exon12	c.G1179A	p.L393L	CATGCTGCCAGAC	.	212.0	18.0	105.0	0.0	.	.	.	Atlas-SNP
TM9SF2	9375	hgsc.bcm.edu	37	13	100192991	100192991	+	Silent	SNP	G	G	T	rs149415928	alternate_allele	TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	.	.	NM_004800	exon8	c.G852T	p.A284A	ATGGGCGTCTAGA	.	160.0	74.0	211.0	0.0	.	.	.	Atlas-SNP
SIGLEC9	27180	hgsc.bcm.edu	37	19	51628989	51628989	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	.	.	NM_001198558	exon2	c.C557T	p.S186F	CCGTGTCCCCCCT	.	50.0	18.0	65.0	0.0	.	.	.	Atlas-SNP
EFHB	151651	hgsc.bcm.edu	37	3	19975292	19975292	+	Silent	SNP	T	T	A	novel		TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	.	.	NM_144715	exon1	c.A219T	p.G73G	TTCTAATCCCATT	.	373.0	29.0	314.0	0.0	.	.	.	Atlas-SNP
PTMA	5757	hgsc.bcm.edu	37	2	232577559	232577559	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	PTMA,NS,carcinoma,0,2	PTMA	NM_001099285	exon5	c.T334C	p.X112Q	GATGACTAGACAG	.	48.0	2.0	50.0	0.0	.	0	2	Atlas-SNP
UTP14A	10813	hgsc.bcm.edu	37	X	129060014	129060014	+	Silent	SNP	C	C	T	rs61738615		TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	.	.	NM_006649	exon13	c.C1869T	p.D623D	AAAGGACGTGGAC	.	377.0	142.0	190.0	0.0	0.014	.	.	Atlas-SNP
NFATC3	4775	hgsc.bcm.edu	37	16	68119617	68119617	+	Silent	SNP	G	G	A	novel		TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	.	.	NM_173163	exon1	c.G33A	p.E11E	CGACGAGCTCGAC	.	22.0	8.0	40.0	0.0	.	.	.	Atlas-SNP
TTC28	23331	hgsc.bcm.edu	37	22	28559108	28559108	+	Silent	SNP	A	A	G	novel		TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	.	.	NM_001145418	exon6	c.T1413C	p.A471A	CTCTGCAGCCCGG	.	58.0	28.0	81.0	0.0	.	.	.	Atlas-SNP
PPFIA2	8499	hgsc.bcm.edu	37	12	81760903	81760903	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	PPFIA2,NS,carcinoma,-1,1	PPFIA2	NM_001220476	exon13	c.A1529T	p.E510V	AAAGATTCTTCAA	.	501.0	107.0	495.0	0.0	.	-1	1	Atlas-SNP
TANC1	85461	hgsc.bcm.edu	37	2	159992709	159992709	+	Silent	SNP	C	C	G	rs375201296	alternate_allele	TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	TANC1,NS,carcinoma,0,2	TANC1	NM_033394	exon5	c.C264G	p.P88P	AGGTCCCGTCAGG	.	44.0	9.0	62.0	0.0	.	0	2	Atlas-SNP
NRD1	4898	hgsc.bcm.edu	37	1	52306079	52306079	+	Missense_Mutation	SNP	T	T	A	rs62648104	bycluster	TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	.	.	NM_001101662	exon2	c.A449T	p.E150V	TCTTCCTCCACCT	.	179.0	18.0	228.0	0.0	0.976	.	.	Atlas-SNP
TDRD6	221400	hgsc.bcm.edu	37	6	46659709	46659709	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	.	.	NM_001168359	exon1	c.G3844A	p.G1282R	AAAATAGGAGATT	.	172.0	32.0	227.0	0.0	.	.	.	Atlas-SNP
ABTB1	80325	hgsc.bcm.edu	37	3	127395400	127395400	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	.	.	NM_172027	exon6	c.G502A	p.A168T	TTTGGGGCCCTGC	.	144.0	9.0	118.0	0.0	.	.	.	Atlas-SNP
TMEM102	284114	hgsc.bcm.edu	37	17	7339839	7339839	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	.	.	NM_178518	exon3	c.G541C	p.E181Q	AGCGAAGAAAGTT	.	119.0	49.0	145.0	0.0	.	.	.	Atlas-SNP
RBM39	9584	hgsc.bcm.edu	37	20	34300982	34300982	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	.	.	NM_184234	exon12	c.C1133T	p.A378V	TGTAGAGCTTGCT	.	90.0	38.0	88.0	0.0	.	.	.	Atlas-SNP
PRSS3P2	154754	hgsc.bcm.edu	37	7	142478944	142478944	+	RNA	SNP	G	G	A	rs377675720		TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	.	.	.	.	.	.	CCTGCCGTTCTTG	.	49.0	5.0	18.0	0.0	.	.	.	Atlas-SNP
EGR4	1961	hgsc.bcm.edu	37	2	73519001	73519001	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	.	.	NM_001965	exon2	c.A1354T	p.T452S	AAGGGGTGGGCGG	.	14.0	8.0	23.0	0.0	.	.	.	Atlas-SNP
TMPRSS15	5651	hgsc.bcm.edu	37	21	19666630	19666630	+	Missense_Mutation	SNP	C	C	T	rs202100185	bycluster;by1000genomes	TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	.	.	NM_002772	exon21	c.G2443A	p.V815I	TGCTGACGAGAGA	.	203.0	11.0	155.0	0.0	0.001	.	.	Atlas-SNP
TTC28	23331	hgsc.bcm.edu	37	22	28559107	28559107	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	.	.	NM_001145418	exon6	c.G1414A	p.A472T	CCTCTGCAGCCCG	.	58.0	28.0	77.0	0.0	.	.	.	Atlas-SNP
RHPN2	85415	hgsc.bcm.edu	37	19	33517507	33517507	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	RHPN2,face,carcinoma,0,2	RHPN2	NM_033103	exon3	c.G217A	p.V73M	GCCGCACTTGCTC	.	22.0	3.0	21.0	1.0	.	0	2	Atlas-SNP
SLC30A9	10463	hgsc.bcm.edu	37	4	41992712	41992712	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	.	.	NM_006345	exon1	c.G44C	p.W15S	GTAGCTGGTCCTC	.	67.0	33.0	80.0	0.0	.	.	.	Atlas-SNP
AP5Z1	9907	hgsc.bcm.edu	37	7	4830438	4830438	+	Silent	SNP	C	C	T	novel		TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	.	.	NM_014855	exon16	c.C2073T	p.P691P	CCTGCCCAGGTGT	.	56.0	12.0	36.0	0.0	.	.	.	Atlas-SNP
PEF1	553115	hgsc.bcm.edu	37	1	32096374	32096374	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	PEF1,NS,carcinoma,+1,1	PEF1	NM_012392	exon5	c.G695A	p.R232H	GCAGAGCGTGGGC	.	42.0	2.0	69.0	1.0	.	+1	1	Atlas-SNP
AHNAK	79026	hgsc.bcm.edu	37	11	62294188	62294188	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	AHNAK,mucosal,malignant_melanoma,0,2	AHNAK	NM_001620	exon5	c.A7701C	p.L2567F	CATCTTTAACTTA	.	154.0	8.0	214.0	0.0	.	0	2	Atlas-SNP
KRTAP9-1	728318	hgsc.bcm.edu	37	17	39346622	39346622	+	Missense_Mutation	SNP	T	T	A	rs79470847	bycluster	TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	KRTAP9-1_ENST00000398470,caecum,carcinoma,0,2	KRTAP9-1_ENST00000398470	NM_001190460	exon1	c.T484A	p.C162S	CAGCCTTGCTGCC	.	96.0	25.0	56.0	0.0	0.500	0	2	Atlas-SNP
LY6G5B	58496	hgsc.bcm.edu	37	6	31639021	31639021	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	.	.	NM_021221	exon2	c.C147G	p.I49M	TACCATCAGCAGC	.	182.0	9.0	215.0	0.0	.	.	.	Atlas-SNP
ANKRD30BP2	149992	hgsc.bcm.edu	37	21	14417695	14417695	+	RNA	SNP	T	T	C	novel		TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	.	.	.	.	.	.	TTAGATTATACAG	.	131.0	25.0	101.0	0.0	.	.	.	Atlas-SNP
EPHA3	2042	hgsc.bcm.edu	37	3	89480495	89480495	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	.	.	NM_005233	exon13	c.G2332C	p.A778P	GAAGCTGCTTATA	.	116.0	54.0	163.0	0.0	.	.	.	Atlas-SNP
TRIP12	9320	hgsc.bcm.edu	37	2	230650472	230650472	+	Splice_Site	SNP	C	C	T	novel		TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	.	.	NM_004238	exon34	c.4869+1G>A	.	AGCTCACCTCATT	.	78.0	43.0	79.0	0.0	.	.	.	Atlas-SNP
HIVEP1	3096	hgsc.bcm.edu	37	6	12125357	12125357	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	.	.	NM_002114	exon4	c.G5329A	p.V1777M	ACAGACGTGAGAC	.	156.0	16.0	160.0	0.0	.	.	.	Atlas-SNP
KRTAP9-1	728318	hgsc.bcm.edu	37	17	39346591	39346591	+	Silent	SNP	C	C	T	rs76923645		TCGA-2G-AAFZ-01A-11D-A42Y-10	TCGA-2G-AAFZ-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6e4ca9a5-5e0a-43cb-9415-8379c4ef3a09	2499651e-d997-4ae7-bad7-8945ce31b25c	KRTAP9-1_ENST00000398470,caecum,carcinoma,0,2	KRTAP9-1_ENST00000398470	NM_001190460	exon1	c.C453T	p.P151P	CCAGCCCACCTGC	.	82.0	29.0	61.0	0.0	0.500	0	2	Atlas-SNP
