Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	Algorithm
KIAA0040	9674	hgsc.bcm.edu	37	1	175129933	175129934	+	Frame_Shift_Ins	INS	-	-	CATC	novel		TCGA-2G-AAGI-01A-11D-A42Y-10	TCGA-2G-AAGI-10A-01D-A433-10	-	-	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	30f7d68d-4e46-4877-aecf-41abb5337d40	30b85f09-03f5-4f99-9b77-03a51c118dc8	KIAA0040,colon,carcinoma,0,1	KIAA0040	NM_001162893	exon5	c.217_218insGATG	p.K73fs	.	.	142.0	20.0	130.0	0.0	.	2	.	Atlas-Indel
KLHDC2	23588	hgsc.bcm.edu	37	14	50249093	50249093	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-2G-AAGI-01A-11D-A42Y-10	TCGA-2G-AAGI-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	30f7d68d-4e46-4877-aecf-41abb5337d40	30b85f09-03f5-4f99-9b77-03a51c118dc8	.	.	NM_014315	exon11	c.G962C	p.W321S	GGTTATGGCACAC	.	165.0	39.0	119.0	0.0	.	.	.	Atlas-SNP
PSME4	23198	hgsc.bcm.edu	37	2	54155274	54155274	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-2G-AAGI-01A-11D-A42Y-10	TCGA-2G-AAGI-10A-01D-A433-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	30f7d68d-4e46-4877-aecf-41abb5337d40	30b85f09-03f5-4f99-9b77-03a51c118dc8	.	.	NM_014614	exon11	c.A1483G	p.N495D	AGTCATTTGGATC	.	168.0	44.0	169.0	0.0	.	.	.	Atlas-SNP
STON1	11037	hgsc.bcm.edu	37	2	48809124	48809124	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-2G-AAGI-01A-11D-A42Y-10	TCGA-2G-AAGI-10A-01D-A433-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	30f7d68d-4e46-4877-aecf-41abb5337d40	30b85f09-03f5-4f99-9b77-03a51c118dc8	.	.	NM_001198595	exon3	c.A1352G	p.N451S	ATGGGAACCTGGA	.	187.0	44.0	148.0	0.0	.	.	.	Atlas-SNP
MSH6	2956	hgsc.bcm.edu	37	2	48026849	48026849	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-2G-AAGI-01A-11D-A42Y-10	TCGA-2G-AAGI-10A-01D-A433-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	30f7d68d-4e46-4877-aecf-41abb5337d40	30b85f09-03f5-4f99-9b77-03a51c118dc8	.	.	NM_000179	exon4	c.A1727C	p.D576A	CAGATGATCGCCA	.	219.0	78.0	153.0	0.0	.	.	.	Atlas-SNP
WNT5B	81029	hgsc.bcm.edu	37	12	1755317	1755317	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-2G-AAGI-01A-11D-A42Y-10	TCGA-2G-AAGI-10A-01D-A433-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	30f7d68d-4e46-4877-aecf-41abb5337d40	30b85f09-03f5-4f99-9b77-03a51c118dc8	.	.	NM_032642	exon5	c.A979G	p.K327E	CAGTTCAAGAGCG	.	133.0	55.0	62.0	0.0	.	.	.	Atlas-SNP
MIR3134	100422990	hgsc.bcm.edu	37	9	115060046	115060046	+	RNA	SNP	G	G	C	novel		TCGA-2G-AAGI-01A-11D-A42Y-10	TCGA-2G-AAGI-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	30f7d68d-4e46-4877-aecf-41abb5337d40	30b85f09-03f5-4f99-9b77-03a51c118dc8	.	.	.	.	.	.	AAATAAGAGCATT	.	24.0	20.0	22.0	0.0	.	.	.	Atlas-SNP
SRCAP	10847	hgsc.bcm.edu	37	16	30732775	30732775	+	Silent	SNP	C	C	A	rs368322185	alternate_allele	TCGA-2G-AAGI-01A-11D-A42Y-10	TCGA-2G-AAGI-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	30f7d68d-4e46-4877-aecf-41abb5337d40	30b85f09-03f5-4f99-9b77-03a51c118dc8	SRCAP,NS,carcinoma,+2,1	SRCAP	NM_006662	exon21	c.C3519A	p.P1173P	ATCTCCCGATATG	.	29.0	2.0	56.0	0.0	.	+2	1	Atlas-SNP
UMODL1	89766	hgsc.bcm.edu	37	21	43531009	43531009	+	Missense_Mutation	SNP	G	G	A	rs200274014		TCGA-2G-AAGI-01A-11D-A42Y-10	TCGA-2G-AAGI-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	30f7d68d-4e46-4877-aecf-41abb5337d40	30b85f09-03f5-4f99-9b77-03a51c118dc8	.	.	NM_173568	exon11	c.G1677A	p.M559I	CCCCATGGGCGGT	.	307.0	74.0	182.0	0.0	.	.	.	Atlas-SNP
ITPR1	3708	hgsc.bcm.edu	37	3	4747945	4747945	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-2G-AAGI-01A-11D-A42Y-10	TCGA-2G-AAGI-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	30f7d68d-4e46-4877-aecf-41abb5337d40	30b85f09-03f5-4f99-9b77-03a51c118dc8	.	.	NM_001099952	exon37	c.G4725T	p.M1575I	AGCCATGAACTGG	.	108.0	26.0	73.0	0.0	.	.	.	Atlas-SNP
POU5F1P4	645682	hgsc.bcm.edu	37	1	155403978	155403978	+	RNA	SNP	C	C	T	novel		TCGA-2G-AAGI-01A-11D-A42Y-10	TCGA-2G-AAGI-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	30f7d68d-4e46-4877-aecf-41abb5337d40	30b85f09-03f5-4f99-9b77-03a51c118dc8	.	.	.	.	.	.	ACTCCTCGGTCCC	.	314.0	69.0	264.0	0.0	.	.	.	Atlas-SNP
LRP5L	91355	hgsc.bcm.edu	37	22	25755835	25755835	+	Silent	SNP	G	G	A	novel		TCGA-2G-AAGI-01A-11D-A42Y-10	TCGA-2G-AAGI-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	30f7d68d-4e46-4877-aecf-41abb5337d40	30b85f09-03f5-4f99-9b77-03a51c118dc8	.	.	NM_001135772	exon3	c.C225T	p.D75D	GTCCATGTCCTCT	.	122.0	71.0	163.0	0.0	.	.	.	Atlas-SNP
HECTD4	283450	hgsc.bcm.edu	37	12	112641514	112641514	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2G-AAGI-01A-11D-A42Y-10	TCGA-2G-AAGI-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	30f7d68d-4e46-4877-aecf-41abb5337d40	30b85f09-03f5-4f99-9b77-03a51c118dc8	.	.	NM_001109662	exon54	c.G7930A	p.A2644T	GCAGAGCAGTTCC	.	202.0	66.0	175.0	0.0	.	.	.	Atlas-SNP
RHBDF1	64285	hgsc.bcm.edu	37	16	108513	108513	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-2G-AAGI-01A-11D-A42Y-10	TCGA-2G-AAGI-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	30f7d68d-4e46-4877-aecf-41abb5337d40	30b85f09-03f5-4f99-9b77-03a51c118dc8	.	.	NM_022450	exon18	c.C2394A	p.Y798X	TTTCCGGTACAGG	.	132.0	6.0	162.0	0.0	.	.	.	Atlas-SNP
TET1	80312	hgsc.bcm.edu	37	10	70332383	70332383	+	Silent	SNP	C	C	G	novel		TCGA-2G-AAGI-01A-11D-A42Y-10	TCGA-2G-AAGI-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	30f7d68d-4e46-4877-aecf-41abb5337d40	30b85f09-03f5-4f99-9b77-03a51c118dc8	.	.	NM_030625	exon2	c.C288G	p.S96S	AGAGTCCTTAACC	.	102.0	38.0	104.0	0.0	.	.	.	Atlas-SNP
DSG2	1829	hgsc.bcm.edu	37	18	29122743	29122743	+	Silent	SNP	C	C	T	novel		TCGA-2G-AAGI-01A-11D-A42Y-10	TCGA-2G-AAGI-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	30f7d68d-4e46-4877-aecf-41abb5337d40	30b85f09-03f5-4f99-9b77-03a51c118dc8	DSG2,NS,malignant_melanoma,+1,2	DSG2	NM_001943	exon14	c.C2262T	p.S754S	GGCTTCCAGAGAC	.	88.0	35.0	115.0	0.0	.	+1	2	Atlas-SNP
