Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	Algorithm
TRIM13	10206	hgsc.bcm.edu	37	13	50588497	50588500	+	RNA	DEL	ACAC	ACAC	-	rs10676627	alternate_allele	TCGA-2G-AAHG-01A-11D-A42Y-10	TCGA-2G-AAHG-10A-01D-A433-10	ACAC	ACAC	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	10eaeb31-4b4d-4a4e-b429-25eaf4d45fa9	6a857e34-f9b6-4512-980b-8bc82ecddee7	.	TRIM13	.	.	.	.	.	.	27.0	16.0	23.0	0.0	.	30	.	Atlas-Indel
MESP2	145873	hgsc.bcm.edu	37	15	90320134	90320134	+	Silent	SNP	A	A	G	novel		TCGA-2G-AAHG-01A-11D-A42Y-10	TCGA-2G-AAHG-10A-01D-A433-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	10eaeb31-4b4d-4a4e-b429-25eaf4d45fa9	6a857e34-f9b6-4512-980b-8bc82ecddee7	MESP2,NS,carcinoma,0,1	MESP2	NM_001039958	exon1	c.A546G	p.Q182Q	GGGGCAAGGGCAG	.	11.0	3.0	14.0	0.0	.	0	1	Atlas-SNP
ATP5S	27109	hgsc.bcm.edu	37	14	50789405	50789405	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2G-AAHG-01A-11D-A42Y-10	TCGA-2G-AAHG-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	10eaeb31-4b4d-4a4e-b429-25eaf4d45fa9	6a857e34-f9b6-4512-980b-8bc82ecddee7	.	.	NM_015684	exon3	c.C329T	p.S110F	CCGACTCTTGTAT	.	132.0	30.0	122.0	0.0	.	.	.	Atlas-SNP
RPLP0	6175	hgsc.bcm.edu	37	12	120637138	120637138	+	Silent	SNP	G	G	A	novel		TCGA-2G-AAHG-01A-11D-A42Y-10	TCGA-2G-AAHG-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	10eaeb31-4b4d-4a4e-b429-25eaf4d45fa9	6a857e34-f9b6-4512-980b-8bc82ecddee7	.	.	NM_053275	exon3	c.C205T	p.L69L	TTTCCAGGTGCCC	.	101.0	20.0	86.0	0.0	.	.	.	Atlas-SNP
ZNF99	7652	hgsc.bcm.edu	37	19	22941279	22941279	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-2G-AAHG-01A-11D-A42Y-10	TCGA-2G-AAHG-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	10eaeb31-4b4d-4a4e-b429-25eaf4d45fa9	6a857e34-f9b6-4512-980b-8bc82ecddee7	ZNF99,NS,carcinoma,0,1	ZNF99	NM_001080409	exon4	c.G1432C	p.E478Q	GTTTCTCTCCAGT	.	62.0	3.0	50.0	1.0	.	0	1	Atlas-SNP
TAOK2	9344	hgsc.bcm.edu	37	16	29998788	29998788	+	Silent	SNP	G	G	A	novel		TCGA-2G-AAHG-01A-11D-A42Y-10	TCGA-2G-AAHG-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	10eaeb31-4b4d-4a4e-b429-25eaf4d45fa9	6a857e34-f9b6-4512-980b-8bc82ecddee7	TAOK2_ENST00000308893,colon,carcinoma,+1,1	TAOK2_ENST00000308893	NM_016151	exon16	c.G3195A	p.A1065A	GGCAGCGGGGGGC	.	89.0	23.0	82.0	0.0	.	+1	1	Atlas-SNP
C5orf56	441108	hgsc.bcm.edu	37	5	131811504	131811504	+	RNA	SNP	C	C	T	novel		TCGA-2G-AAHG-01A-11D-A42Y-10	TCGA-2G-AAHG-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	10eaeb31-4b4d-4a4e-b429-25eaf4d45fa9	6a857e34-f9b6-4512-980b-8bc82ecddee7	.	.	.	.	.	.	GGACACCGCGTCT	.	51.0	19.0	51.0	0.0	.	.	.	Atlas-SNP
FGF20	26281	hgsc.bcm.edu	37	8	16853180	16853180	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2G-AAHG-01A-11D-A42Y-10	TCGA-2G-AAHG-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	10eaeb31-4b4d-4a4e-b429-25eaf4d45fa9	6a857e34-f9b6-4512-980b-8bc82ecddee7	FGF20,leg,malignant_melanoma,0,1	FGF20	NM_019851	exon2	c.G374A	p.G125E	AGTTCTCCTTTGT	.	143.0	35.0	82.0	0.0	.	0	1	Atlas-SNP
MESP2	145873	hgsc.bcm.edu	37	15	90320132	90320132	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-2G-AAHG-01A-11D-A42Y-10	TCGA-2G-AAHG-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	10eaeb31-4b4d-4a4e-b429-25eaf4d45fa9	6a857e34-f9b6-4512-980b-8bc82ecddee7	MESP2,NS,carcinoma,-2,1	MESP2	NM_001039958	exon1	c.C544G	p.Q182E	CAGGGGCAAGGGC	.	11.0	2.0	14.0	0.0	.	-2	1	Atlas-SNP
VCX3B	425054	hgsc.bcm.edu	37	X	8434340	8434340	+	Silent	SNP	G	G	A	novel		TCGA-2G-AAHG-01A-11D-A42Y-10	TCGA-2G-AAHG-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	10eaeb31-4b4d-4a4e-b429-25eaf4d45fa9	6a857e34-f9b6-4512-980b-8bc82ecddee7	.	.	NM_001001888	exon3	c.G657A	p.Q219Q	GAGCCAGGTGGAG	.	434.0	179.0	289.0	1.0	.	.	.	Atlas-SNP
ZNF433	163059	hgsc.bcm.edu	37	19	12126012	12126012	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2G-AAHG-01A-11D-A42Y-10	TCGA-2G-AAHG-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	10eaeb31-4b4d-4a4e-b429-25eaf4d45fa9	6a857e34-f9b6-4512-980b-8bc82ecddee7	.	.	NM_001080411	exon4	c.C1670T	p.T557I	TCTCCAGTGTGAG	.	171.0	55.0	137.0	0.0	.	.	.	Atlas-SNP
COL18A1	80781	hgsc.bcm.edu	37	21	46924434	46924434	+	Splice_Site	SNP	A	A	C	rs28696990	bycluster	TCGA-2G-AAHG-01A-11D-A42Y-10	TCGA-2G-AAHG-10A-01D-A433-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	10eaeb31-4b4d-4a4e-b429-25eaf4d45fa9	6a857e34-f9b6-4512-980b-8bc82ecddee7	.	.	NM_130445	exon35	c.2825-2A>C	.	CCCCCCAGGCCCC	.	52.0	25.0	12.0	0.0	.	.	.	Atlas-SNP
FAM60A	58516	hgsc.bcm.edu	37	12	31440707	31440707	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2G-AAHG-01A-11D-A42Y-10	TCGA-2G-AAHG-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	10eaeb31-4b4d-4a4e-b429-25eaf4d45fa9	6a857e34-f9b6-4512-980b-8bc82ecddee7	.	.	NM_021238	exon6	c.C367T	p.H123Y	TACTGTGAGCATC	.	101.0	14.0	47.0	0.0	.	.	.	Atlas-SNP
ACACA	31	hgsc.bcm.edu	37	17	35445916	35445916	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-2G-AAHG-01A-11D-A42Y-10	TCGA-2G-AAHG-10A-01D-A433-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	10eaeb31-4b4d-4a4e-b429-25eaf4d45fa9	6a857e34-f9b6-4512-980b-8bc82ecddee7	ACACA_ENST00000353139,bladder,carcinoma,+2,2	ACACA_ENST00000353139	NM_198834	exon55	c.A6985C	p.I2329L	ATTTGATGTTTTC	.	302.0	83.0	273.0	0.0	.	+2	2	Atlas-SNP
WBP1	23559	hgsc.bcm.edu	37	2	74685732	74685732	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2G-AAHG-01A-11D-A42Y-10	TCGA-2G-AAHG-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	10eaeb31-4b4d-4a4e-b429-25eaf4d45fa9	6a857e34-f9b6-4512-980b-8bc82ecddee7	.	.	NM_012477	exon1	c.G3A	p.M1I	AGGTATGGCTCGG	.	152.0	44.0	111.0	0.0	.	.	.	Atlas-SNP
