Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	Algorithm
KCNA4	3739	hgsc.bcm.edu	37	11	30032345	30032347	+	In_Frame_Del	DEL	CTC	CTC	-	novel		TCGA-2G-AAHP-01A-12D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	CTC	CTC	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a1cc9688-b055-48ba-a634-7f51a8df3220	6cc28f85-5c08-46da-89e5-536025497482	.	KCNA4	NM_002233	exon2	c.1880_1882del	p.627_628del	.	.	87.0	28.0	171.0	0.0	.	158	.	Pindel,Atlas-Indel
FMNL2	114793	hgsc.bcm.edu	37	2	153476069	153476069	+	Silent	SNP	C	C	A	novel		TCGA-2G-AAHP-01A-12D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a1cc9688-b055-48ba-a634-7f51a8df3220	6cc28f85-5c08-46da-89e5-536025497482	FMNL2,rectum,carcinoma,0,2	FMNL2	NM_052905	exon15	c.C1674A	p.P558P	GCCGCCCCCTCCT	.	96.0	17.0	86.0	0.0	.	0	2	Atlas-SNP
ADARB2-AS1	642394	hgsc.bcm.edu	37	10	1578121	1578121	+	RNA	SNP	G	G	C	novel		TCGA-2G-AAHP-01A-12D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a1cc9688-b055-48ba-a634-7f51a8df3220	6cc28f85-5c08-46da-89e5-536025497482	.	.	.	.	.	.	GTCCCAGTCTTTT	.	65.0	7.0	53.0	0.0	.	.	.	Atlas-SNP
CACNA1E	777	hgsc.bcm.edu	37	1	181765833	181765833	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2G-AAHP-01A-12D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a1cc9688-b055-48ba-a634-7f51a8df3220	6cc28f85-5c08-46da-89e5-536025497482	.	.	NM_001205293	exon47	c.G6238A	p.G2080S	TCAGGGGGCAGGG	.	125.0	38.0	124.0	0.0	.	.	.	Atlas-SNP
E2F7	144455	hgsc.bcm.edu	37	12	77449732	77449732	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-2G-AAHP-01A-12D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a1cc9688-b055-48ba-a634-7f51a8df3220	6cc28f85-5c08-46da-89e5-536025497482	.	.	NM_203394	exon3	c.T272G	p.I91S	GCACTAATGAGCA	.	224.0	43.0	151.0	0.0	.	.	.	Atlas-SNP
DNMT1	1786	hgsc.bcm.edu	37	19	10254526	10254526	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2G-AAHP-01A-12D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a1cc9688-b055-48ba-a634-7f51a8df3220	6cc28f85-5c08-46da-89e5-536025497482	.	.	NM_001130823	exon29	c.G3032A	p.R1011Q	TTGATCCGGCCAA	.	337.0	72.0	277.0	0.0	.	.	.	Atlas-SNP
HOXD9	3235	hgsc.bcm.edu	37	2	176988290	176988290	+	Missense_Mutation	SNP	C	C	A	rs200417886		TCGA-2G-AAHP-01A-12D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a1cc9688-b055-48ba-a634-7f51a8df3220	6cc28f85-5c08-46da-89e5-536025497482	.	.	NM_014213	exon1	c.C794A	p.P265Q	CGCAGCCGCAGCA	.	156.0	9.0	129.0	0.0	.	.	.	Atlas-SNP
HDLBP	3069	hgsc.bcm.edu	37	2	242189261	242189261	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2G-AAHP-01A-12D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a1cc9688-b055-48ba-a634-7f51a8df3220	6cc28f85-5c08-46da-89e5-536025497482	.	.	NM_005336	exon12	c.C1507T	p.R503C	CCATGCGAGATGC	.	35.0	12.0	44.0	0.0	.	.	.	Atlas-SNP
ANKRD50	57182	hgsc.bcm.edu	37	4	125592523	125592523	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2G-AAHP-01A-12D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a1cc9688-b055-48ba-a634-7f51a8df3220	6cc28f85-5c08-46da-89e5-536025497482	.	.	NM_020337	exon4	c.G1909A	p.V637M	AATCCACTTTTAC	.	94.0	52.0	121.0	0.0	.	.	.	Atlas-SNP
PCLO	27445	hgsc.bcm.edu	37	7	82581494	82581494	+	Missense_Mutation	SNP	T	T	A	rs78195222	bycluster	TCGA-2G-AAHP-01A-12D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a1cc9688-b055-48ba-a634-7f51a8df3220	6cc28f85-5c08-46da-89e5-536025497482	Q9Y6V0-3,rectum,carcinoma,0,15	Q9Y6V0-3	NM_014510	exon5	c.A8775T	p.E2925D	TTCATCTTCTATT	.	85.0	5.0	63.0	0.0	0.500	0	15	Atlas-SNP
LCE1F	353137	hgsc.bcm.edu	37	1	152749040	152749040	+	Missense_Mutation	SNP	G	G	T	rs200171226	byfrequency	TCGA-2G-AAHP-01A-12D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a1cc9688-b055-48ba-a634-7f51a8df3220	6cc28f85-5c08-46da-89e5-536025497482	.	.	NM_178354	exon1	c.G193T	p.G65C	GGGGGTGGTGGCT	.	147.0	13.0	135.0	0.0	0.034	.	.	Atlas-SNP
DENND4B	9909	hgsc.bcm.edu	37	1	153907297	153907297	+	Silent	SNP	C	C	T	novel		TCGA-2G-AAHP-01A-12D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a1cc9688-b055-48ba-a634-7f51a8df3220	6cc28f85-5c08-46da-89e5-536025497482	DENND4B_ENST00000361217,NS,carcinoma,0,6	DENND4B_ENST00000361217	NM_014856	exon18	c.G2712A	p.Q904Q	CTGCTGCTGCTGC	.	57.0	9.0	51.0	0.0	.	0	6	Atlas-SNP
PTGR1	22949	hgsc.bcm.edu	37	9	114356535	114356535	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-2G-AAHP-01A-12D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a1cc9688-b055-48ba-a634-7f51a8df3220	6cc28f85-5c08-46da-89e5-536025497482	.	.	NM_001146108	exon3	c.A119C	p.E40A	AAAGCTTCAAGCA	.	111.0	55.0	132.0	0.0	.	.	.	Atlas-SNP
