Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	Algorithm
DSPP	1834	hgsc.bcm.edu	37	4	88537205	88537213	+	In_Frame_Del	DEL	GACAGCAGT	GACAGCAGT	-	novel		TCGA-2G-AAHP-05A-11D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	GACAGCAGT	GACAGCAGT	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	e5dab1ce-fa7a-4dda-8d9a-fdc3a104a2e1	6cc28f85-5c08-46da-89e5-536025497482	.	DSPP	NM_014208	exon5	c.3390_3398del	p.1130_1133del	.	.	46.0	34.0	48.0	0.0	.	174	.	Atlas-Indel
NAA16	79612	hgsc.bcm.edu	37	13	41894924	41894924	+	Silent	SNP	G	G	T	novel		TCGA-2G-AAHP-05A-11D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	e5dab1ce-fa7a-4dda-8d9a-fdc3a104a2e1	6cc28f85-5c08-46da-89e5-536025497482	.	.	NM_001110798	exon4	c.G366T	p.L122L	CTCACTGTTGCAG	.	86.0	17.0	96.0	0.0	.	.	.	Atlas-SNP
C12orf65	91574	hgsc.bcm.edu	37	12	123741505	123741505	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-2G-AAHP-05A-11D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	e5dab1ce-fa7a-4dda-8d9a-fdc3a104a2e1	6cc28f85-5c08-46da-89e5-536025497482	.	.	NM_001194995	exon3	c.A428C	p.K143T	GGAAAAAAAGAGC	.	234.0	26.0	199.0	0.0	.	.	.	Atlas-SNP
NSD1	64324	hgsc.bcm.edu	37	5	176636782	176636782	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-2G-AAHP-05A-11D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	e5dab1ce-fa7a-4dda-8d9a-fdc3a104a2e1	6cc28f85-5c08-46da-89e5-536025497482	.	.	NM_022455	exon5	c.C1382G	p.T461R	ACTGCACAAATGA	.	144.0	29.0	199.0	0.0	.	.	.	Atlas-SNP
LAMA5	3911	hgsc.bcm.edu	37	20	60886012	60886012	+	Silent	SNP	C	C	A	novel		TCGA-2G-AAHP-05A-11D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	e5dab1ce-fa7a-4dda-8d9a-fdc3a104a2e1	6cc28f85-5c08-46da-89e5-536025497482	.	.	NM_005560	exon74	c.G10227T	p.G3409G	CCGAGTCCCGAGG	.	53.0	12.0	74.0	0.0	.	.	.	Atlas-SNP
ST6GALNAC1	55808	hgsc.bcm.edu	37	17	74623260	74623260	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2G-AAHP-05A-11D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	e5dab1ce-fa7a-4dda-8d9a-fdc3a104a2e1	6cc28f85-5c08-46da-89e5-536025497482	.	.	NM_018414	exon4	c.G1061A	p.S354N	GGGAGGCTGGCCA	.	57.0	7.0	69.0	0.0	.	.	.	Atlas-SNP
CHMP6	79643	hgsc.bcm.edu	37	17	78971136	78971136	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-2G-AAHP-05A-11D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	e5dab1ce-fa7a-4dda-8d9a-fdc3a104a2e1	6cc28f85-5c08-46da-89e5-536025497482	.	.	NM_024591	exon6	c.A490T	p.T164S	GCAATCACTCAGG	.	90.0	5.0	127.0	0.0	.	.	.	Atlas-SNP
RNF213	57674	hgsc.bcm.edu	37	17	78321501	78321501	+	Silent	SNP	C	C	T	novel		TCGA-2G-AAHP-05A-11D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	e5dab1ce-fa7a-4dda-8d9a-fdc3a104a2e1	6cc28f85-5c08-46da-89e5-536025497482	.	.	NM_001256071	exon29	c.C9366T	p.H3122H	CGTCCACCTCGGC	.	156.0	26.0	161.0	0.0	.	.	.	Atlas-SNP
PCDHB2	56133	hgsc.bcm.edu	37	5	140476082	140476082	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2G-AAHP-05A-11D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	e5dab1ce-fa7a-4dda-8d9a-fdc3a104a2e1	6cc28f85-5c08-46da-89e5-536025497482	PCDHB2,trunk,malignant_melanoma,0,1	PCDHB2	NM_018936	exon1	c.G1708A	p.G570S	CAGAACGGCTCCG	.	20.0	3.0	42.0	0.0	.	0	1	Atlas-SNP
ZDHHC8P1	150244	hgsc.bcm.edu	37	22	23742934	23742934	+	RNA	SNP	T	T	C	novel		TCGA-2G-AAHP-05A-11D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	e5dab1ce-fa7a-4dda-8d9a-fdc3a104a2e1	6cc28f85-5c08-46da-89e5-536025497482	.	.	.	.	.	.	CATCCATGGCTGA	.	20.0	4.0	14.0	0.0	.	.	.	Atlas-SNP
DOCK11	139818	hgsc.bcm.edu	37	X	117680026	117680026	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-2G-AAHP-05A-11D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	e5dab1ce-fa7a-4dda-8d9a-fdc3a104a2e1	6cc28f85-5c08-46da-89e5-536025497482	.	.	NM_144658	exon6	c.C505G	p.Q169E	ATAAAACAAGGCT	.	41.0	9.0	73.0	0.0	.	.	.	Atlas-SNP
KRAS	3845	hgsc.bcm.edu	37	12	25380275	25380275	+	Missense_Mutation	SNP	T	T	A	rs17851045	bycluster	TCGA-2G-AAHP-05A-11D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	e5dab1ce-fa7a-4dda-8d9a-fdc3a104a2e1	6cc28f85-5c08-46da-89e5-536025497482	KRAS_ENST00000256078,colon,carcinoma,0,429	KRAS_ENST00000256078	NM_004985	exon3	c.A183T	p.Q61H	CTCCTCTTGACCT	.	165.0	32.0	126.0	0.0	.	0	429	Atlas-SNP
NELL2	4753	hgsc.bcm.edu	37	12	45173782	45173782	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2G-AAHP-05A-11D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	e5dab1ce-fa7a-4dda-8d9a-fdc3a104a2e1	6cc28f85-5c08-46da-89e5-536025497482	NELL2_ENST00000437801,NS,carcinoma,-1,2	NELL2_ENST00000437801	NM_001145107	exon5	c.G509A	p.G170D	CGATGGCCACTAC	.	187.0	16.0	177.0	0.0	.	-1	2	Atlas-SNP
PCDHB16	57717	hgsc.bcm.edu	37	5	140563836	140563836	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2G-AAHP-05A-11D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	e5dab1ce-fa7a-4dda-8d9a-fdc3a104a2e1	6cc28f85-5c08-46da-89e5-536025497482	PCDHB16,NS,carcinoma,0,1	PCDHB16	NM_020957	exon1	c.G1702A	p.G568S	CAGAACGGCTCCG	.	8.0	4.0	8.0	0.0	.	0	1	Atlas-SNP
FRS2	10818	hgsc.bcm.edu	37	12	69964184	69964184	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-2G-AAHP-05A-11D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	e5dab1ce-fa7a-4dda-8d9a-fdc3a104a2e1	6cc28f85-5c08-46da-89e5-536025497482	.	.	NM_001042555	exon7	c.T140C	p.L47S	TGATTTTATACAC	.	193.0	24.0	179.0	0.0	.	.	.	Atlas-SNP
RNF8	9025	hgsc.bcm.edu	37	6	37358600	37358600	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-2G-AAHP-05A-11D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	e5dab1ce-fa7a-4dda-8d9a-fdc3a104a2e1	6cc28f85-5c08-46da-89e5-536025497482	.	.	NM_183078	exon7	c.T1319A	p.F440Y	GAGGATTCTCTCT	.	73.0	11.0	88.0	0.0	.	.	.	Atlas-SNP
CSAG4	100130935	hgsc.bcm.edu	37	X	151896817	151896817	+	RNA	SNP	C	C	T	novel		TCGA-2G-AAHP-05A-11D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	e5dab1ce-fa7a-4dda-8d9a-fdc3a104a2e1	6cc28f85-5c08-46da-89e5-536025497482	.	.	.	.	.	.	GCCTATCCACATT	.	227.0	66.0	226.0	0.0	.	.	.	Atlas-SNP
NAV1	89796	hgsc.bcm.edu	37	1	201778383	201778383	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-2G-AAHP-05A-11D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	e5dab1ce-fa7a-4dda-8d9a-fdc3a104a2e1	6cc28f85-5c08-46da-89e5-536025497482	.	.	NM_020443	exon21	c.C4299G	p.I1433M	CATCATCAAAGGG	.	406.0	51.0	400.0	0.0	.	.	.	Atlas-SNP
ARHGAP24	83478	hgsc.bcm.edu	37	4	86491797	86491797	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-2G-AAHP-05A-11D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	e5dab1ce-fa7a-4dda-8d9a-fdc3a104a2e1	6cc28f85-5c08-46da-89e5-536025497482	.	.	NM_001025616	exon2	c.A103G	p.T35A	GTCAAGACTTGGC	.	118.0	16.0	141.0	0.0	.	.	.	Atlas-SNP
PCDHB16	57717	hgsc.bcm.edu	37	5	140563835	140563835	+	Silent	SNP	C	C	T	rs370851835		TCGA-2G-AAHP-05A-11D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	e5dab1ce-fa7a-4dda-8d9a-fdc3a104a2e1	6cc28f85-5c08-46da-89e5-536025497482	PCDHB16,bladder,carcinoma,+2,2	PCDHB16	NM_020957	exon1	c.C1701T	p.N567N	GCAGAACGGCTCC	.	8.0	4.0	8.0	0.0	.	+2	2	Atlas-SNP
CNKSR2	22866	hgsc.bcm.edu	37	X	21519642	21519642	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2G-AAHP-05A-11D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	e5dab1ce-fa7a-4dda-8d9a-fdc3a104a2e1	6cc28f85-5c08-46da-89e5-536025497482	.	.	NM_001168647	exon8	c.C746T	p.P249L	AGTCACCTGCAGA	.	255.0	51.0	206.0	0.0	.	.	.	Atlas-SNP
ZC3H7A	29066	hgsc.bcm.edu	37	16	11859005	11859005	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-2G-AAHP-05A-11D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	e5dab1ce-fa7a-4dda-8d9a-fdc3a104a2e1	6cc28f85-5c08-46da-89e5-536025497482	.	.	NM_014153	exon15	c.G1724C	p.C575S	TCAAAACATTTCT	.	119.0	20.0	112.0	0.0	.	.	.	Atlas-SNP
BRWD1	54014	hgsc.bcm.edu	37	21	40582800	40582800	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-2G-AAHP-05A-11D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	e5dab1ce-fa7a-4dda-8d9a-fdc3a104a2e1	6cc28f85-5c08-46da-89e5-536025497482	.	.	NM_018963	exon35	c.A3956G	p.K1319R	TGTTTCTTCCAGT	.	127.0	9.0	145.0	0.0	.	.	.	Atlas-SNP
RYR2	6262	hgsc.bcm.edu	37	1	237789007	237789007	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-2G-AAHP-05A-11D-A42Y-10	TCGA-2G-AAHP-10A-01D-A433-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	e5dab1ce-fa7a-4dda-8d9a-fdc3a104a2e1	6cc28f85-5c08-46da-89e5-536025497482	.	.	NM_001035	exon40	c.A6069C	p.L2023F	TGATTTAACAATT	.	73.0	10.0	65.0	0.0	.	.	.	Atlas-SNP
