Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	Algorithm
TCTN1	79600	hgsc.bcm.edu	37	12	111052124	111052124	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-2G-AALS-01A-12D-A42Y-10	TCGA-2G-AALS-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	34d1f451-0b1c-4caf-bd25-c4b7fc096820	120ca414-0a11-4d4b-8742-6e6b7532ab65	.	.	NM_024549	exon1	c.G137A	p.G46E	CCTTCGGAACTTT	.	129.0	16.0	85.0	0.0	.	.	.	Atlas-SNP
ZRANB1	54764	hgsc.bcm.edu	37	10	126673488	126673488	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-2G-AALS-01A-12D-A42Y-10	TCGA-2G-AALS-10A-01D-A433-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	34d1f451-0b1c-4caf-bd25-c4b7fc096820	120ca414-0a11-4d4b-8742-6e6b7532ab65	.	.	NM_017580	exon9	c.A2054G	p.D685G	GGCTTGACCGCTA	.	99.0	5.0	84.0	0.0	.	.	.	Atlas-SNP
VPS72	6944	hgsc.bcm.edu	37	1	151156791	151156791	+	Splice_Site	SNP	A	A	T	novel		TCGA-2G-AALS-01A-12D-A42Y-10	TCGA-2G-AALS-10A-01D-A433-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	34d1f451-0b1c-4caf-bd25-c4b7fc096820	120ca414-0a11-4d4b-8742-6e6b7532ab65	.	.	NM_005997	exon5	c.562+2T>A	.	AGACTTACCCAGT	.	93.0	11.0	83.0	0.0	.	.	.	Atlas-SNP
PIK3C2G	5288	hgsc.bcm.edu	37	12	18573943	18573943	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-2G-AALS-01A-12D-A42Y-10	TCGA-2G-AALS-10A-01D-A433-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	34d1f451-0b1c-4caf-bd25-c4b7fc096820	120ca414-0a11-4d4b-8742-6e6b7532ab65	.	.	NM_004570	exon16	c.T2261C	p.L754P	AACTACTGGAATA	.	127.0	12.0	89.0	0.0	.	.	.	Atlas-SNP
CHST2	9435	hgsc.bcm.edu	37	3	142840933	142840933	+	Nonsense_Mutation	SNP	C	C	G	rs140050898	bycluster;byfrequency;alternate_allele	TCGA-2G-AALS-01A-12D-A42Y-10	TCGA-2G-AALS-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	34d1f451-0b1c-4caf-bd25-c4b7fc096820	120ca414-0a11-4d4b-8742-6e6b7532ab65	CHST2,NS,carcinoma,0,1	CHST2	NM_004267	exon2	c.C1275G	p.Y425X	GCGGTACGAGGAC	.	89.0	4.0	72.0	0.0	.	0	1	Atlas-SNP
SP1	6667	hgsc.bcm.edu	37	12	53776737	53776737	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-2G-AALS-01A-12D-A42Y-10	TCGA-2G-AALS-10A-01D-A433-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	34d1f451-0b1c-4caf-bd25-c4b7fc096820	120ca414-0a11-4d4b-8742-6e6b7532ab65	.	.	NM_138473	exon3	c.A1006C	p.M336L	AGCAACATGGGAA	.	132.0	17.0	106.0	0.0	.	.	.	Atlas-SNP
STAU2	27067	hgsc.bcm.edu	37	8	74464275	74464275	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-2G-AALS-01A-12D-A42Y-10	TCGA-2G-AALS-10A-01D-A433-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	34d1f451-0b1c-4caf-bd25-c4b7fc096820	120ca414-0a11-4d4b-8742-6e6b7532ab65	.	.	NM_001164380	exon13	c.A1502C	p.E501A	AAATATTCCAGTT	.	136.0	19.0	142.0	0.0	.	.	.	Atlas-SNP
ZBTB7C	201501	hgsc.bcm.edu	37	18	45567151	45567151	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2G-AALS-01A-12D-A42Y-10	TCGA-2G-AALS-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	34d1f451-0b1c-4caf-bd25-c4b7fc096820	120ca414-0a11-4d4b-8742-6e6b7532ab65	ZBTB7C,NS,carcinoma,0,1	ZBTB7C	NM_001039360	exon2	c.G328A	p.A110T	TGGCTGCGTTGAG	.	74.0	3.0	87.0	0.0	.	0	1	Atlas-SNP
LRRC37B	114659	hgsc.bcm.edu	37	17	30374805	30374805	+	Silent	SNP	A	A	G	novel		TCGA-2G-AALS-01A-12D-A42Y-10	TCGA-2G-AALS-10A-01D-A433-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	34d1f451-0b1c-4caf-bd25-c4b7fc096820	120ca414-0a11-4d4b-8742-6e6b7532ab65	.	.	NM_052888	exon9	c.A2268G	p.P756P	GAATCCAGAAGGA	.	82.0	10.0	66.0	0.0	.	.	.	Atlas-SNP
GJA9	81025	hgsc.bcm.edu	37	1	39340498	39340498	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-2G-AALS-01A-12D-A42Y-10	TCGA-2G-AALS-10A-01D-A433-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	34d1f451-0b1c-4caf-bd25-c4b7fc096820	120ca414-0a11-4d4b-8742-6e6b7532ab65	.	.	NM_030772	exon2	c.A1273G	p.T425A	CCCATGTAGCTCT	.	238.0	33.0	193.0	0.0	.	.	.	Atlas-SNP
SYNE1	23345	hgsc.bcm.edu	37	6	152589280	152589280	+	Silent	SNP	G	G	C	novel		TCGA-2G-AALS-01A-12D-A42Y-10	TCGA-2G-AALS-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	34d1f451-0b1c-4caf-bd25-c4b7fc096820	120ca414-0a11-4d4b-8742-6e6b7532ab65	.	.	NM_182961	exon100	c.C18726G	p.A6242A	CTGCTCGGCTAAT	.	111.0	6.0	88.0	0.0	.	.	.	Atlas-SNP
TIMELESS	8914	hgsc.bcm.edu	37	12	56817448	56817448	+	Silent	SNP	C	C	T	novel		TCGA-2G-AALS-01A-12D-A42Y-10	TCGA-2G-AALS-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	34d1f451-0b1c-4caf-bd25-c4b7fc096820	120ca414-0a11-4d4b-8742-6e6b7532ab65	TIMELESS,NS,carcinoma,0,1	TIMELESS	NM_003920	exon17	c.G2010A	p.E670E	CTCCTCCTCTTCT	.	90.0	4.0	45.0	1.0	.	0	1	Atlas-SNP
KAT6B	23522	hgsc.bcm.edu	37	10	76781860	76781860	+	Missense_Mutation	SNP	A	A	C	rs11001248	bycluster	TCGA-2G-AALS-01A-12D-A42Y-10	TCGA-2G-AALS-10A-01D-A433-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	34d1f451-0b1c-4caf-bd25-c4b7fc096820	120ca414-0a11-4d4b-8742-6e6b7532ab65	.	.	NM_012330	exon16	c.A3243C	p.E1081D	GGAGGAAGAAGAG	.	102.0	7.0	51.0	0.0	.	.	.	Atlas-SNP
MYH7	4625	hgsc.bcm.edu	37	14	23893198	23893198	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-2G-AALS-01A-12D-A42Y-10	TCGA-2G-AALS-10A-01D-A433-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	34d1f451-0b1c-4caf-bd25-c4b7fc096820	120ca414-0a11-4d4b-8742-6e6b7532ab65	.	.	NM_000257	exon23	c.G2840A	p.C947Y	TCTGAGCACTCAT	.	81.0	12.0	101.0	0.0	.	.	.	Atlas-SNP
TTC24	164118	hgsc.bcm.edu	37	1	156551835	156551835	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-2G-AALS-01A-12D-A42Y-10	TCGA-2G-AALS-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	34d1f451-0b1c-4caf-bd25-c4b7fc096820	120ca414-0a11-4d4b-8742-6e6b7532ab65	.	.	NM_001105669	exon2	c.G679T	p.E227X	CTTGCCGAGAGGA	.	69.0	4.0	49.0	0.0	.	.	.	Atlas-SNP
PCDHB10	56126	hgsc.bcm.edu	37	5	140573719	140573719	+	Missense_Mutation	SNP	G	G	A	rs148484995	bycluster;byfrequency;by1000genomes	TCGA-2G-AALS-01A-12D-A42Y-10	TCGA-2G-AALS-10A-01D-A433-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	34d1f451-0b1c-4caf-bd25-c4b7fc096820	120ca414-0a11-4d4b-8742-6e6b7532ab65	PCDHB10,NS,lymphoid_neoplasm,-2,1	PCDHB10	NM_018930	exon1	c.G1594A	p.G532S	CGCGTGGGCGCCA	.	57.0	4.0	43.0	0.0	0.039	-2	1	Atlas-SNP
