Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	Algorithm
KIT	3815	hgsc.bcm.edu	37	4	55599320	55599320	+	Missense_Mutation	SNP	G	G	C	rs121913506	bycluster	TCGA-4K-AA1G-01A-11D-A435-10	TCGA-4K-AA1G-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	14124f8f-2370-40de-94e3-012ff511bac1	3644a980-951f-4811-b56c-4d02e52f5252	KIT,colon,carcinoma,0,932	KIT	NM_000222	exon17	c.G2446C	p.D816H	GCCAGAGACATCA	.	55.0	39.0	74.0	0.0	.	0	932	Atlas-SNP
CD46	4179	hgsc.bcm.edu	37	1	207941164	207941164	+	Silent	SNP	C	C	T	novel		TCGA-4K-AA1G-01A-11D-A435-10	TCGA-4K-AA1G-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	14124f8f-2370-40de-94e3-012ff511bac1	3644a980-951f-4811-b56c-4d02e52f5252	.	.	NM_172359	exon8	c.C942T	p.A314A	CAGTGCCTCAGGT	.	109.0	31.0	110.0	0.0	.	.	.	Atlas-SNP
RPL19	6143	hgsc.bcm.edu	37	17	37360424	37360424	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-4K-AA1G-01A-11D-A435-10	TCGA-4K-AA1G-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	14124f8f-2370-40de-94e3-012ff511bac1	3644a980-951f-4811-b56c-4d02e52f5252	RPL19,NS,carcinoma,-1,1	RPL19	NM_000981	exon5	c.C451T	p.R151C	AAGGCCCGCAAGA	.	27.0	3.0	42.0	1.0	.	-1	1	Atlas-SNP
IRG1	730249	hgsc.bcm.edu	37	13	77531565	77531565	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-4K-AA1G-01A-11D-A435-10	TCGA-4K-AA1G-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	14124f8f-2370-40de-94e3-012ff511bac1	3644a980-951f-4811-b56c-4d02e52f5252	.	.	NM_001258406	exon4	c.G879C	p.E293D	AGCAGAGAGAGCC	.	89.0	26.0	146.0	0.0	.	.	.	Atlas-SNP
PRDM8	56978	hgsc.bcm.edu	37	4	81123252	81123252	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-4K-AA1G-01A-11D-A435-10	TCGA-4K-AA1G-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	14124f8f-2370-40de-94e3-012ff511bac1	3644a980-951f-4811-b56c-4d02e52f5252	PRDM8,colon,carcinoma,0,1	PRDM8	NM_001099403	exon4	c.G636C	p.Q212H	AGACCAGCAGCAG	.	89.0	5.0	162.0	1.0	.	0	1	Atlas-SNP
SETD1A	9739	hgsc.bcm.edu	37	16	30974776	30974776	+	Silent	SNP	T	T	C	novel		TCGA-4K-AA1G-01A-11D-A435-10	TCGA-4K-AA1G-10A-01D-A438-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	14124f8f-2370-40de-94e3-012ff511bac1	3644a980-951f-4811-b56c-4d02e52f5252	.	.	NM_014712	exon5	c.T540C	p.Y180Y	ATACTATGAACTA	.	75.0	15.0	103.0	0.0	.	.	.	Atlas-SNP
DYNC1LI1	51143	hgsc.bcm.edu	37	3	32578558	32578558	+	Nonsense_Mutation	SNP	G	G	C	novel		TCGA-4K-AA1G-01A-11D-A435-10	TCGA-4K-AA1G-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	14124f8f-2370-40de-94e3-012ff511bac1	3644a980-951f-4811-b56c-4d02e52f5252	.	.	NM_016141	exon6	c.C777G	p.Y259X	ATCTCTGTAGTCA	.	249.0	54.0	300.0	0.0	.	.	.	Atlas-SNP
ZBTB10	65986	hgsc.bcm.edu	37	8	81426189	81426189	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-4K-AA1G-01A-11D-A435-10	TCGA-4K-AA1G-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	14124f8f-2370-40de-94e3-012ff511bac1	3644a980-951f-4811-b56c-4d02e52f5252	.	.	NM_023929	exon3	c.G1906A	p.V636M	AGGAATGTGAATG	.	92.0	17.0	100.0	0.0	.	.	.	Atlas-SNP
RBM23	55147	hgsc.bcm.edu	37	14	23374412	23374412	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-4K-AA1G-01A-11D-A435-10	TCGA-4K-AA1G-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	14124f8f-2370-40de-94e3-012ff511bac1	3644a980-951f-4811-b56c-4d02e52f5252	.	.	NM_001077351	exon8	c.C617A	p.S206Y	CCCTTAGAACGAC	.	95.0	17.0	109.0	0.0	.	.	.	Atlas-SNP
FBXO16	157574	hgsc.bcm.edu	37	8	28304723	28304723	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-4K-AA1G-01A-11D-A435-10	TCGA-4K-AA1G-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	14124f8f-2370-40de-94e3-012ff511bac1	3644a980-951f-4811-b56c-4d02e52f5252	.	.	NM_172366	exon7	c.C808T	p.Q270X	TGTCCTGCAATTT	.	60.0	12.0	59.0	0.0	.	.	.	Atlas-SNP
SIAE	54414	hgsc.bcm.edu	37	11	124517336	124517336	+	Silent	SNP	G	G	A	novel		TCGA-4K-AA1G-01A-11D-A435-10	TCGA-4K-AA1G-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	14124f8f-2370-40de-94e3-012ff511bac1	3644a980-951f-4811-b56c-4d02e52f5252	.	.	NM_170601	exon7	c.C891T	p.I297I	GTCTTCGATGAGT	.	39.0	17.0	64.0	0.0	.	.	.	Atlas-SNP
MUC4	4585	hgsc.bcm.edu	37	3	195505828	195505828	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-4K-AA1G-01A-11D-A435-10	TCGA-4K-AA1G-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	14124f8f-2370-40de-94e3-012ff511bac1	3644a980-951f-4811-b56c-4d02e52f5252	MUC4_ENST00000463781,NS,carcinoma,-1,3	MUC4_ENST00000463781	NM_018406	exon2	c.C12623G	p.P4208R	GGAAGAGGGGTGG	.	101.0	5.0	103.0	0.0	.	-1	3	Atlas-SNP
FBXO2	26232	hgsc.bcm.edu	37	1	11709267	11709267	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-4K-AA1G-01A-11D-A435-10	TCGA-4K-AA1G-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	14124f8f-2370-40de-94e3-012ff511bac1	3644a980-951f-4811-b56c-4d02e52f5252	.	.	NM_012168	exon5	c.C633G	p.S211R	AGCGTCGCTGCGG	.	72.0	14.0	84.0	0.0	.	.	.	Atlas-SNP
SLC35E3	55508	hgsc.bcm.edu	37	12	69140302	69140302	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-4K-AA1G-01A-11D-A435-10	TCGA-4K-AA1G-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	14124f8f-2370-40de-94e3-012ff511bac1	3644a980-951f-4811-b56c-4d02e52f5252	.	.	NM_018656	exon1	c.G145C	p.V49L	ACCCTGGTGCACT	.	139.0	37.0	120.0	0.0	.	.	.	Atlas-SNP
PIK3C2A	5286	hgsc.bcm.edu	37	11	17121444	17121444	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-4K-AA1G-01A-11D-A435-10	TCGA-4K-AA1G-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	14124f8f-2370-40de-94e3-012ff511bac1	3644a980-951f-4811-b56c-4d02e52f5252	.	.	NM_002645	exon25	c.C4081G	p.Q1361E	TAGTTTGGGGTTG	.	70.0	21.0	104.0	0.0	.	.	.	Atlas-SNP
