Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	Algorithm
KRAS	3845	hgsc.bcm.edu	37	12	25398285	25398285	+	Missense_Mutation	SNP	C	C	T	rs121913530	bycluster	TCGA-4K-AA1H-01A-11D-A435-10	TCGA-4K-AA1H-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d16db8a0-c864-4e5d-be62-73087e35b0c1	642a50a5-f7ea-4e8c-a370-94d09c675725	KRAS_ENST00000256078,NS,adenocarcinoma,+1,25136	KRAS_ENST00000256078	NM_004985	exon2	c.G34A	p.G12S	CGCCACCAGCTCC	.	188.0	23.0	143.0	0.0	.	+1	25136	Atlas-SNP
KRT4	3851	hgsc.bcm.edu	37	12	53207603	53207603	+	Silent	SNP	A	A	G	rs7135148	bycluster;by2hit2allele;byhapmap	TCGA-4K-AA1H-01A-11D-A435-10	TCGA-4K-AA1H-10A-01D-A438-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d16db8a0-c864-4e5d-be62-73087e35b0c1	642a50a5-f7ea-4e8c-a370-94d09c675725	KRT4,rectum,carcinoma,0,1	KRT4	NM_002272	exon1	c.T240C	p.F80F	AGTGCCAAAGCCT	.	91.0	12.0	70.0	0.0	.	0	1	Atlas-SNP
MIR3134	100422990	hgsc.bcm.edu	37	9	115060100	115060100	+	RNA	SNP	A	A	C	rs7870091	bycluster;byfrequency;by2hit2allele	TCGA-4K-AA1H-01A-11D-A435-10	TCGA-4K-AA1H-10A-01D-A438-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d16db8a0-c864-4e5d-be62-73087e35b0c1	642a50a5-f7ea-4e8c-a370-94d09c675725	.	.	.	.	.	.	AAAAAAAAAAAAA	.	31.0	4.0	29.0	0.0	0.019	.	.	Atlas-SNP
EML6	400954	hgsc.bcm.edu	37	2	55138179	55138179	+	Silent	SNP	G	G	A	novel		TCGA-4K-AA1H-01A-11D-A435-10	TCGA-4K-AA1H-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d16db8a0-c864-4e5d-be62-73087e35b0c1	642a50a5-f7ea-4e8c-a370-94d09c675725	.	.	NM_001039753	exon24	c.G3498A	p.E1166E	TTCAGAGGTAATA	.	315.0	19.0	252.0	0.0	.	.	.	Atlas-SNP
SLCO3A1	28232	hgsc.bcm.edu	37	15	92694221	92694221	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-4K-AA1H-01A-11D-A435-10	TCGA-4K-AA1H-10A-01D-A438-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d16db8a0-c864-4e5d-be62-73087e35b0c1	642a50a5-f7ea-4e8c-a370-94d09c675725	.	.	NM_013272	exon9	c.T1730C	p.L577P	GAGTTCTTTTTCT	.	92.0	4.0	45.0	0.0	.	.	.	Atlas-SNP
EPHX1	2052	hgsc.bcm.edu	37	1	226019577	226019577	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-4K-AA1H-01A-11D-A435-10	TCGA-4K-AA1H-10A-01D-A438-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d16db8a0-c864-4e5d-be62-73087e35b0c1	642a50a5-f7ea-4e8c-a370-94d09c675725	.	.	NM_001136018	exon3	c.T281C	p.I94T	AAGTCATCTCCTA	.	125.0	7.0	106.0	0.0	.	.	.	Atlas-SNP
LTA4H	4048	hgsc.bcm.edu	37	12	96400148	96400148	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-4K-AA1H-01A-11D-A435-10	TCGA-4K-AA1H-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d16db8a0-c864-4e5d-be62-73087e35b0c1	642a50a5-f7ea-4e8c-a370-94d09c675725	.	.	NM_000895	exon16	c.C1474A	p.L492M	CCTTCAGGTCTGT	.	87.0	4.0	45.0	0.0	.	.	.	Atlas-SNP
NCOA3	8202	hgsc.bcm.edu	37	20	46279845	46279845	+	Silent	SNP	G	G	A	novel		TCGA-4K-AA1H-01A-11D-A435-10	TCGA-4K-AA1H-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d16db8a0-c864-4e5d-be62-73087e35b0c1	642a50a5-f7ea-4e8c-a370-94d09c675725	NCOA3,NS,carcinoma,0,1	NCOA3	NM_181659	exon20	c.G3771A	p.Q1257Q	GCAGCAGCAGCAG	.	81.0	14.0	76.0	0.0	.	0	1	Atlas-SNP
SLTM	79811	hgsc.bcm.edu	37	15	59192108	59192108	+	Silent	SNP	T	T	C	novel		TCGA-4K-AA1H-01A-11D-A435-10	TCGA-4K-AA1H-10A-01D-A438-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d16db8a0-c864-4e5d-be62-73087e35b0c1	642a50a5-f7ea-4e8c-a370-94d09c675725	.	.	NM_024755	exon7	c.A618G	p.Q206Q	TACTTCTTGTGTA	.	78.0	6.0	52.0	0.0	.	.	.	Atlas-SNP
KRT4	3851	hgsc.bcm.edu	37	12	53207606	53207606	+	Silent	SNP	G	G	A	rs79164931	bycluster;by1000genomes	TCGA-4K-AA1H-01A-11D-A435-10	TCGA-4K-AA1H-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d16db8a0-c864-4e5d-be62-73087e35b0c1	642a50a5-f7ea-4e8c-a370-94d09c675725	KRT4,rectum,carcinoma,0,3	KRT4	NM_002272	exon1	c.C237T	p.G79G	GCCAAAGCCTCCA	.	93.0	11.0	70.0	0.0	.	0	3	Atlas-SNP
OR51B4	79339	hgsc.bcm.edu	37	11	5322649	5322649	+	Silent	SNP	G	G	A	rs377539411		TCGA-4K-AA1H-01A-11D-A435-10	TCGA-4K-AA1H-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d16db8a0-c864-4e5d-be62-73087e35b0c1	642a50a5-f7ea-4e8c-a370-94d09c675725	.	.	NM_033179	exon1	c.C528T	p.C176C	ATGGAGGCAAAAT	.	94.0	4.0	105.0	0.0	.	.	.	Atlas-SNP
