Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	Algorithm
C11orf48	79081	hgsc.bcm.edu	37	11	62434994	62434994	+	Splice_Site	DEL	C	C	-	novel		TCGA-WZ-A7V4-01A-11D-A435-10	TCGA-WZ-A7V4-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a7bea22d-c914-41c9-bb43-0b1785b36b5b	5d280fa0-3f46-444a-8d3f-bc1be8090d47	.	C11orf48	NM_024099	exon5	c.538+2G>-	.	.	.	133.0	16.0	141.0	0.0	.	18	.	Atlas-Indel
ZNF141	7700	hgsc.bcm.edu	37	4	367205	367205	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-WZ-A7V4-01A-11D-A435-10	TCGA-WZ-A7V4-10A-01D-A438-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a7bea22d-c914-41c9-bb43-0b1785b36b5b	5d280fa0-3f46-444a-8d3f-bc1be8090d47	.	.	NM_003441	exon4	c.A979G	p.T327A	ACCCTTACTAAAC	.	74.0	18.0	75.0	0.0	.	.	.	Atlas-SNP
OBSCN	84033	hgsc.bcm.edu	37	1	228480321	228480321	+	Silent	SNP	G	G	T	novel		TCGA-WZ-A7V4-01A-11D-A435-10	TCGA-WZ-A7V4-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a7bea22d-c914-41c9-bb43-0b1785b36b5b	5d280fa0-3f46-444a-8d3f-bc1be8090d47	.	.	NM_001271223	exon45	c.G11988T	p.V3996V	CCCTGTGGAGTGG	.	168.0	24.0	185.0	0.0	.	.	.	Atlas-SNP
ANKHD1	54882	hgsc.bcm.edu	37	5	139907915	139907915	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-WZ-A7V4-01A-11D-A435-10	TCGA-WZ-A7V4-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a7bea22d-c914-41c9-bb43-0b1785b36b5b	5d280fa0-3f46-444a-8d3f-bc1be8090d47	.	.	NM_017747	exon29	c.G5384A	p.G1795E	CATCTGGAGTAGG	.	91.0	13.0	128.0	0.0	.	.	.	Atlas-SNP
PIK3CD	5293	hgsc.bcm.edu	37	1	9775907	9775907	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-WZ-A7V4-01A-11D-A435-10	TCGA-WZ-A7V4-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a7bea22d-c914-41c9-bb43-0b1785b36b5b	5d280fa0-3f46-444a-8d3f-bc1be8090d47	.	.	NM_005026	exon5	c.G371A	p.G124D	CCGCAGGCCTCCA	.	82.0	12.0	77.0	0.0	.	.	.	Atlas-SNP
GPR108	56927	hgsc.bcm.edu	37	19	6737580	6737580	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-WZ-A7V4-01A-11D-A435-10	TCGA-WZ-A7V4-10A-01D-A438-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a7bea22d-c914-41c9-bb43-0b1785b36b5b	5d280fa0-3f46-444a-8d3f-bc1be8090d47	.	.	NM_001080452	exon1	c.T8G	p.V3G	TCGCTCACTGCCA	.	17.0	5.0	6.0	0.0	.	.	.	Atlas-SNP
CRIM1	51232	hgsc.bcm.edu	37	2	36623892	36623892	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-WZ-A7V4-01A-11D-A435-10	TCGA-WZ-A7V4-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a7bea22d-c914-41c9-bb43-0b1785b36b5b	5d280fa0-3f46-444a-8d3f-bc1be8090d47	.	.	NM_016441	exon2	c.G467A	p.S156N	TTCCAAGTCAGGA	.	142.0	22.0	163.0	0.0	.	.	.	Atlas-SNP
NRAS	4893	hgsc.bcm.edu	37	1	115256529	115256529	+	Missense_Mutation	SNP	T	T	C	rs11554290	bycluster;byfrequency;byhapmap	TCGA-WZ-A7V4-01A-11D-A435-10	TCGA-WZ-A7V4-10A-01D-A438-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a7bea22d-c914-41c9-bb43-0b1785b36b5b	5d280fa0-3f46-444a-8d3f-bc1be8090d47	NRAS,NS,haematopoietic_neoplasm,-1,2068	NRAS	NM_002524	exon3	c.A182G	p.Q61R	TCTTCTTGTCCAG	.	136.0	18.0	151.0	0.0	.	-1	2068	Atlas-SNP
HECTD4	283450	hgsc.bcm.edu	37	12	112628625	112628625	+	Missense_Mutation	SNP	G	G	T	rs151280588	by1000genomes;alternate_allele	TCGA-WZ-A7V4-01A-11D-A435-10	TCGA-WZ-A7V4-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a7bea22d-c914-41c9-bb43-0b1785b36b5b	5d280fa0-3f46-444a-8d3f-bc1be8090d47	.	.	NM_001109662	exon60	c.C9035A	p.P3012Q	GATGTCGGAATGG	.	115.0	5.0	123.0	0.0	.	.	.	Atlas-SNP
ERVFRD-1	405754	hgsc.bcm.edu	37	6	11105023	11105023	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-WZ-A7V4-01A-11D-A435-10	TCGA-WZ-A7V4-10A-01D-A438-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a7bea22d-c914-41c9-bb43-0b1785b36b5b	5d280fa0-3f46-444a-8d3f-bc1be8090d47	.	.	NM_207582	exon2	c.A521T	p.K174I	GGAGGTTTGGGGA	.	116.0	9.0	133.0	0.0	.	.	.	Atlas-SNP
GPR45	11250	hgsc.bcm.edu	37	2	105859305	105859305	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-WZ-A7V4-01A-11D-A435-10	TCGA-WZ-A7V4-10A-01D-A438-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a7bea22d-c914-41c9-bb43-0b1785b36b5b	5d280fa0-3f46-444a-8d3f-bc1be8090d47	.	.	NM_007227	exon1	c.A990T	p.K330N	CAAAAAATTCCGC	.	131.0	11.0	120.0	0.0	.	.	.	Atlas-SNP
KIAA2018	205717	hgsc.bcm.edu	37	3	113376107	113376107	+	Silent	SNP	C	C	T	novel		TCGA-WZ-A7V4-01A-11D-A435-10	TCGA-WZ-A7V4-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a7bea22d-c914-41c9-bb43-0b1785b36b5b	5d280fa0-3f46-444a-8d3f-bc1be8090d47	KIAA2018,colon,carcinoma,0,1	KIAA2018	NM_001009899	exon7	c.G4422A	p.Q1474Q	TTGTTGCTGTTGC	.	59.0	6.0	53.0	0.0	.	0	1	Atlas-SNP
LRRC43	254050	hgsc.bcm.edu	37	12	122685176	122685176	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-WZ-A7V4-01A-11D-A435-10	TCGA-WZ-A7V4-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a7bea22d-c914-41c9-bb43-0b1785b36b5b	5d280fa0-3f46-444a-8d3f-bc1be8090d47	.	.	NM_001098519	exon9	c.G1589A	p.R530K	AAGACAGGACGGG	.	53.0	13.0	47.0	0.0	.	.	.	Atlas-SNP
DHX29	54505	hgsc.bcm.edu	37	5	54581236	54581236	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-WZ-A7V4-01A-11D-A435-10	TCGA-WZ-A7V4-10A-01D-A438-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a7bea22d-c914-41c9-bb43-0b1785b36b5b	5d280fa0-3f46-444a-8d3f-bc1be8090d47	.	.	NM_019030	exon10	c.T1241C	p.V414A	TTGATTACCCTAA	.	124.0	7.0	151.0	0.0	.	.	.	Atlas-SNP
ZNF814	730051	hgsc.bcm.edu	37	19	58385793	58385793	+	Missense_Mutation	SNP	C	C	T	rs113623532	bycluster	TCGA-WZ-A7V4-01A-11D-A435-10	TCGA-WZ-A7V4-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a7bea22d-c914-41c9-bb43-0b1785b36b5b	5d280fa0-3f46-444a-8d3f-bc1be8090d47	.	.	NM_001144989	exon3	c.G965A	p.R322K	TAAGGTCTTTTCC	.	137.0	12.0	107.0	0.0	0.500	.	.	Atlas-SNP
ZNF814	730051	hgsc.bcm.edu	37	19	58385790	58385790	+	Missense_Mutation	SNP	G	G	T	rs111727691	bycluster	TCGA-WZ-A7V4-01A-11D-A435-10	TCGA-WZ-A7V4-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a7bea22d-c914-41c9-bb43-0b1785b36b5b	5d280fa0-3f46-444a-8d3f-bc1be8090d47	.	.	NM_001144989	exon3	c.C968A	p.P323H	TCATAAGGTCTTT	.	141.0	12.0	112.0	0.0	0.500	.	.	Atlas-SNP
PGAM5	192111	hgsc.bcm.edu	37	12	133291445	133291445	+	Nonsense_Mutation	SNP	C	C	T	rs374915398		TCGA-WZ-A7V4-01A-11D-A435-10	TCGA-WZ-A7V4-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a7bea22d-c914-41c9-bb43-0b1785b36b5b	5d280fa0-3f46-444a-8d3f-bc1be8090d47	.	.	NM_138575	exon2	c.C193T	p.R65X	ATCAGGCGAGAAC	.	107.0	10.0	93.0	0.0	.	.	.	Atlas-SNP
NOL9	79707	hgsc.bcm.edu	37	1	6586826	6586826	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-WZ-A7V4-01A-11D-A435-10	TCGA-WZ-A7V4-10A-01D-A438-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a7bea22d-c914-41c9-bb43-0b1785b36b5b	5d280fa0-3f46-444a-8d3f-bc1be8090d47	.	.	NM_024654	exon11	c.A1889T	p.E630V	AGCTCTTCCGGGG	.	130.0	28.0	124.0	0.0	.	.	.	Atlas-SNP
SMARCA2	6595	hgsc.bcm.edu	37	9	2039776	2039776	+	Silent	SNP	A	A	G	rs13296987	byfrequency	TCGA-WZ-A7V4-01A-11D-A435-10	TCGA-WZ-A7V4-10A-01D-A438-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a7bea22d-c914-41c9-bb43-0b1785b36b5b	5d280fa0-3f46-444a-8d3f-bc1be8090d47	SMARCA2_ENST00000349721,NS,carcinoma,0,2	SMARCA2_ENST00000349721	NM_139045	exon4	c.A666G	p.Q222Q	GCAGCAACAGCAG	.	73.0	5.0	87.0	1.0	0.250	0	2	Atlas-SNP
FKBP8	23770	hgsc.bcm.edu	37	19	18650505	18650505	+	Silent	SNP	C	C	A	rs370114965	alternate_allele	TCGA-WZ-A7V4-01A-11D-A435-10	TCGA-WZ-A7V4-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a7bea22d-c914-41c9-bb43-0b1785b36b5b	5d280fa0-3f46-444a-8d3f-bc1be8090d47	FKBP8,NS,carcinoma,0,1	FKBP8	NM_012181	exon3	c.G318T	p.T106T	GACCAGCGTCTTC	.	35.0	5.0	31.0	0.0	.	0	1	Atlas-SNP
