Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	Algorithm
WDFY1	57590	hgsc.bcm.edu	37	2	224809898	224809898	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-XE-A8H1-01A-11D-A435-10	TCGA-XE-A8H1-10A-01D-A438-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	308bc9ed-2d07-4805-8c9b-721b6dac164d	74fe1db1-9f3c-4457-804a-9432ce8156f5	.	.	NM_020830	exon1	c.A104G	p.K35R	TCCTCCTTGGGGA	.	32.0	7.0	32.0	0.0	.	.	.	Atlas-SNP
SPHK2	56848	hgsc.bcm.edu	37	19	49131956	49131956	+	Silent	SNP	C	C	A	novel		TCGA-XE-A8H1-01A-11D-A435-10	TCGA-XE-A8H1-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	308bc9ed-2d07-4805-8c9b-721b6dac164d	74fe1db1-9f3c-4457-804a-9432ce8156f5	.	.	NM_020126	exon7	c.C891A	p.G297G	CCTGGGCCTCGAC	.	22.0	7.0	31.0	0.0	.	.	.	Atlas-SNP
MMACHC	25974	hgsc.bcm.edu	37	1	45973168	45973168	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-XE-A8H1-01A-11D-A435-10	TCGA-XE-A8H1-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	308bc9ed-2d07-4805-8c9b-721b6dac164d	74fe1db1-9f3c-4457-804a-9432ce8156f5	.	.	NM_015506	exon2	c.G222A	p.M74I	CCGAATGCTGACT	.	116.0	20.0	115.0	0.0	.	.	.	Atlas-SNP
DCAF8L2	347442	hgsc.bcm.edu	37	X	27765692	27765692	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-XE-A8H1-01A-11D-A435-10	TCGA-XE-A8H1-10A-01D-A438-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	308bc9ed-2d07-4805-8c9b-721b6dac164d	74fe1db1-9f3c-4457-804a-9432ce8156f5	.	.	NM_001136533	exon1	c.A680G	p.H227R	CAGACCATGTCGG	.	117.0	43.0	104.0	0.0	.	.	.	Atlas-SNP
FAM86HP	729375	hgsc.bcm.edu	37	3	129818153	129818153	+	RNA	SNP	A	A	C	novel		TCGA-XE-A8H1-01A-11D-A435-10	TCGA-XE-A8H1-10A-01D-A438-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	308bc9ed-2d07-4805-8c9b-721b6dac164d	74fe1db1-9f3c-4457-804a-9432ce8156f5	.	.	.	.	.	.	GGAAACAGTTTCT	.	623.0	26.0	630.0	0.0	.	.	.	Atlas-SNP
BRCA1	672	hgsc.bcm.edu	37	17	41234509	41234509	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-XE-A8H1-01A-11D-A435-10	TCGA-XE-A8H1-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	308bc9ed-2d07-4805-8c9b-721b6dac164d	74fe1db1-9f3c-4457-804a-9432ce8156f5	BRCA1,NS,carcinoma,0,1	BRCA1	NM_007300	exon12	c.C4269A	p.S1423R	AGGCTGGCTCCCA	.	115.0	6.0	112.0	0.0	.	0	1	Atlas-SNP
