Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	Algorithm
RAB42	115273	hgsc.bcm.edu	37	1	28920547	28920547	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	.,1	.	NM_001193532	exon2	c.574delT	p.W192fs	.	.	68.0	13.0	75.0	0.0	.	10	1	Atlas-Indel
CAMSAP3	57662	hgsc.bcm.edu	37	19	7675802	7675802	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	.	.	NM_001080429	exon10	c.A1115T	p.N372I	CTCAGAACAACAG	.	57.0	12.0	85.0	0.0	.	.	.	Atlas-SNP
SLC25A42	284439	hgsc.bcm.edu	37	19	19218819	19218819	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	.	.	NM_178526	exon7	c.T614C	p.F205S	TGAGCTTCTTCAC	.	71.0	13.0	76.0	0.0	.	.	.	Atlas-SNP
AIRE	326	hgsc.bcm.edu	37	21	45716314	45716314	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	.	.	NM_000383	exon13	c.T1552G	p.S518A	CTGGAGTCCCTTC	.	64.0	8.0	104.0	0.0	.	.	.	Atlas-SNP
KDM2A	22992	hgsc.bcm.edu	37	11	67022423	67022423	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	.	.	NM_012308	exon21	c.G3386A	p.C1129Y	GAGGATGCAAGCA	.	64.0	9.0	99.0	0.0	.	.	.	Atlas-SNP
RNR1	6052	hgsc.bcm.edu	37	MT	1282	1282	+	RNA	SNP	G	G	A	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	.	.	.	.	.	.	AACCCTGATGAAG	.	20.0	13.0	14.0	0.0	.	.	.	Atlas-SNP
APOBEC3B	9582	hgsc.bcm.edu	37	22	39382074	39382074	+	Silent	SNP	C	C	T	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	APOBEC3B,NS,carcinoma,+1,1	APOBEC3B	NM_004900	exon3	c.C432T	p.R144R	AGCCCGCGTGACG	.	37.0	3.0	43.0	0.0	.	+1	1	Atlas-SNP
TP53	7157	hgsc.bcm.edu	37	17	7574027	7574027	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	TP53_ENST00000269305,NS,carcinoma,0,16	TP53_ENST00000269305	NM_000546	exon10	c.G1000T	p.G334W	CACGCCCACGGAT	.	76.0	10.0	106.0	0.0	.	0	16	Atlas-SNP
ERBB2	2064	hgsc.bcm.edu	37	17	37879626	37879626	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	.	.	NM_004448	exon17	c.G2001C	p.L667F	GGTCTTGGGGGTG	.	84.0	17.0	109.0	0.0	.	.	.	Atlas-SNP
CMTM5	116173	hgsc.bcm.edu	37	14	23847656	23847656	+	Silent	SNP	C	C	T	rs371218018		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	.	.	NM_138460	exon2	c.C225T	p.F75F	CCTCTTCCTCTAT	.	144.0	26.0	135.0	0.0	.	.	.	Atlas-SNP
PLEKHA8P1	51054	hgsc.bcm.edu	37	12	45567287	45567287	+	RNA	SNP	C	C	T	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	PLEKHA8P1,NS,carcinoma,+2,1	PLEKHA8P1	.	.	.	.	AGAGGGCTTCAGT	.	117.0	9.0	105.0	0.0	.	+2	1	Atlas-SNP
RBM4	5936	hgsc.bcm.edu	37	11	66411186	66411186	+	Silent	SNP	T	T	A	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	.	.	NM_002896	exon3	c.T678A	p.R226R	CTGCCGTGCTGCC	.	51.0	11.0	51.0	0.0	.	.	.	Atlas-SNP
PRKXP1	441733	hgsc.bcm.edu	37	15	101094337	101094337	+	RNA	SNP	G	G	A	rs191146252	by1000genomes	TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	.	.	.	.	.	.	GTCCCTGTAGATG	.	122.0	15.0	102.0	0.0	0.000	.	.	Atlas-SNP
ITPR2	3709	hgsc.bcm.edu	37	12	26636703	26636703	+	Silent	SNP	C	C	T	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	ITPR2,NS,carcinoma,-1,1	ITPR2	NM_002223	exon42	c.G5940A	p.K1980K	TACATTCTTCTCA	.	253.0	27.0	185.0	1.0	.	-1	1	Atlas-SNP
FAM198B	51313	hgsc.bcm.edu	37	4	159092431	159092431	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	.	.	NM_016613	exon2	c.A97T	p.R33W	GGGTCCTTGGACG	.	83.0	7.0	109.0	0.0	.	.	.	Atlas-SNP
RORA	6095	hgsc.bcm.edu	37	15	60849113	60849113	+	Silent	SNP	C	C	T	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	.	.	NM_134260	exon3	c.G234A	p.Q78Q	GCCATTCTGCCTC	.	178.0	18.0	151.0	0.0	.	.	.	Atlas-SNP
FAM149B1	317662	hgsc.bcm.edu	37	10	74994957	74994957	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	.	.	NM_173348	exon12	c.C1483T	p.H495Y	AAACCCCATGGCG	.	74.0	11.0	80.0	0.0	.	.	.	Atlas-SNP
RORA	6095	hgsc.bcm.edu	37	15	60849111	60849111	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	.	.	NM_134260	exon3	c.A236T	p.N79I	TTGCCATTCTGCC	.	176.0	17.0	150.0	0.0	.	.	.	Atlas-SNP
ATP13A2	23400	hgsc.bcm.edu	37	1	17318882	17318882	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	.	.	NM_022089	exon18	c.C1861T	p.P621S	TGACTGGCACCGG	.	80.0	8.0	78.0	0.0	.	.	.	Atlas-SNP
EIF4G3	8672	hgsc.bcm.edu	37	1	21299496	21299496	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	.	.	NM_001198803	exon11	c.C455T	p.T152I	CTTACAGTTTTTT	.	69.0	13.0	64.0	0.0	.	.	.	Atlas-SNP
OXLD1	339229	hgsc.bcm.edu	37	17	79632527	79632527	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	.	.	NM_001039842	exon2	c.G148A	p.A50T	CAGGGGCTTGCGC	.	60.0	9.0	59.0	0.0	.	.	.	Atlas-SNP
ZNF850	342892	hgsc.bcm.edu	37	19	37239994	37239994	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	.	.	NM_001193552	exon5	c.T1948C	p.C650R	TCCCACATTCCTG	.	20.0	6.0	20.0	0.0	.	.	.	Atlas-SNP
DMXL1	1657	hgsc.bcm.edu	37	5	118469192	118469192	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	.	.	NM_005509	exon12	c.T1573A	p.S525T	TAGGTGTCCTTTG	.	81.0	15.0	85.0	0.0	.	.	.	Atlas-SNP
KRT9	3857	hgsc.bcm.edu	37	17	39727976	39727976	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	.	.	NM_000226	exon1	c.T269C	p.F90S	CCCCCAAAGCCAC	.	136.0	21.0	145.0	0.0	.	.	.	Atlas-SNP
AIRE	326	hgsc.bcm.edu	37	21	45716315	45716315	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	.	.	NM_000383	exon13	c.C1553T	p.S518F	TGGAGTCCCTTCT	.	64.0	9.0	104.0	0.0	.	.	.	Atlas-SNP
CNOT3	4849	hgsc.bcm.edu	37	19	54646888	54646888	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	CNOT3,NS,carcinoma,+1,6	CNOT3	NM_014516	exon3	c.A59C	p.E20A	TGTCCGAGGGCGT	.	71.0	10.0	75.0	0.0	.	+1	6	Atlas-SNP
NRAS	4893	hgsc.bcm.edu	37	1	115256529	115256529	+	Missense_Mutation	SNP	T	T	C	rs11554290	bycluster;byfrequency;byhapmap	TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	NRAS,NS,haematopoietic_neoplasm,-1,2068	NRAS	NM_002524	exon3	c.A182G	p.Q61R	TCTTCTTGTCCAG	.	101.0	18.0	97.0	0.0	.	-1	2068	Atlas-SNP
KIAA0368	23392	hgsc.bcm.edu	37	9	114132781	114132781	+	Silent	SNP	G	G	A	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	.	.	NM_001080398	exon46	c.C5442T	p.I1814I	CTTCAAGATATCA	.	112.0	12.0	88.0	0.0	.	.	.	Atlas-SNP
THOC5	8563	hgsc.bcm.edu	37	22	29916094	29916094	+	Splice_Site	SNP	C	C	G	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	.	.	NM_001002877	exon16	c.1278-1G>C	.	AGGATGCTGCAGA	.	52.0	10.0	57.0	0.0	.	.	.	Atlas-SNP
PRKCSH	5589	hgsc.bcm.edu	37	19	11558370	11558370	+	Silent	SNP	G	G	A	rs77563879	bycluster	TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	PRKCSH,caecum,carcinoma,0,1	PRKCSH	NM_001001329	exon11	c.G966A	p.E322E	GGAGGAGGAAGAA	.	54.0	3.0	77.0	1.0	.	0	1	Atlas-SNP
DENND4B	9909	hgsc.bcm.edu	37	1	153907287	153907287	+	Missense_Mutation	SNP	G	G	C	rs199597671		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	.	.	NM_014856	exon18	c.C2722G	p.Q908E	GCTGCTGCTGCTG	.	34.0	5.0	35.0	0.0	.	.	.	Atlas-SNP
MIR548N	100302152	hgsc.bcm.edu	37	2	179500487	179500487	+	RNA	SNP	G	G	A	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	.	.	.	.	.	.	GAACAAGTAATAT	.	103.0	13.0	96.0	0.0	.	.	.	Atlas-SNP
FMN2	56776	hgsc.bcm.edu	37	1	240371435	240371435	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	FMN2,NS,carcinoma,-1,2	FMN2	NM_020066	exon5	c.C3323T	p.P1108L	GCATACCTCCTCC	.	71.0	18.0	77.0	0.0	.	-1	2	Atlas-SNP
ITGA4	3676	hgsc.bcm.edu	37	2	182400167	182400167	+	Silent	SNP	C	C	T	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	ITGA4,NS,carcinoma,0,1	ITGA4	NM_000885	exon28	c.C3012T	p.F1004F	TGGCTTCTTTAAA	.	269.0	34.0	237.0	0.0	.	0	1	Atlas-SNP
FZD8	8325	hgsc.bcm.edu	37	10	35930262	35930262	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	.	.	NM_031866	exon1	c.G96C	p.E32D	TGCCAGCTCCTTG	.	41.0	11.0	51.0	0.0	.	.	.	Atlas-SNP
SUPT20HL1	100130302	hgsc.bcm.edu	37	X	24382379	24382379	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	.	.	NM_001136234	exon1	c.C1502T	p.A501V	TTGCTGCTGCTGC	.	173.0	13.0	94.0	0.0	.	.	.	Atlas-SNP
AIRE	326	hgsc.bcm.edu	37	21	45716316	45716316	+	Silent	SNP	C	C	T	novel		TCGA-XY-A89B-01A-11D-A435-10	TCGA-XY-A89B-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	33cb241d-2efe-4922-af5a-389ea190a083	f478c02b-426c-4d7c-824f-ef1b8d222670	.	.	NM_000383	exon13	c.C1554T	p.S518S	GGAGTCCCTTCTG	.	64.0	7.0	104.0	0.0	.	.	.	Atlas-SNP
