Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	Algorithm
KIT	3815	hgsc.bcm.edu	37	4	55594221	55594221	+	Missense_Mutation	SNP	A	A	G	rs121913512	bycluster	TCGA-YU-A90S-01A-11D-A435-10	TCGA-YU-A90S-10A-01D-A438-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	786db3db-1833-4d7f-8168-a9f029de4c19	d44ef07d-f21c-4327-893b-536b55976470	KIT,NS,malignant_melanoma,0,38	KIT	NM_000222	exon13	c.A1924G	p.K642E	GAACTCAAAGTCC	.	160.0	8.0	164.0	0.0	.	0	38	Atlas-SNP
KEAP1	9817	hgsc.bcm.edu	37	19	10610444	10610444	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-YU-A90S-01A-11D-A435-10	TCGA-YU-A90S-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	786db3db-1833-4d7f-8168-a9f029de4c19	d44ef07d-f21c-4327-893b-536b55976470	.	.	NM_012289	exon2	c.C266T	p.P89L	GCGGCCGGTGCAT	.	89.0	4.0	87.0	0.0	.	.	.	Atlas-SNP
CADM1	23705	hgsc.bcm.edu	37	11	115080343	115080343	+	Silent	SNP	G	G	T	novel		TCGA-YU-A90S-01A-11D-A435-10	TCGA-YU-A90S-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	786db3db-1833-4d7f-8168-a9f029de4c19	d44ef07d-f21c-4327-893b-536b55976470	CADM1,NS,carcinoma,0,6	CADM1	NM_014333	exon8	c.C1029A	p.T343T	GGTGGTGGTTGTT	.	43.0	4.0	50.0	1.0	.	0	6	Atlas-SNP
PSG4	5672	hgsc.bcm.edu	37	19	43699192	43699192	+	Missense_Mutation	SNP	G	G	T	rs367853186	alternate_allele	TCGA-YU-A90S-01A-11D-A435-10	TCGA-YU-A90S-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	786db3db-1833-4d7f-8168-a9f029de4c19	d44ef07d-f21c-4327-893b-536b55976470	.	.	NM_002780	exon4	c.C943A	p.H315N	CATATCGGTCCCG	.	55.0	4.0	42.0	0.0	.	.	.	Atlas-SNP
ESRRA	2101	hgsc.bcm.edu	37	11	64082666	64082666	+	Silent	SNP	A	A	G	novel		TCGA-YU-A90S-01A-11D-A435-10	TCGA-YU-A90S-10A-01D-A438-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	786db3db-1833-4d7f-8168-a9f029de4c19	d44ef07d-f21c-4327-893b-536b55976470	ESRRA,colon,carcinoma,0,1	ESRRA	NM_004451	exon6	c.A936G	p.L312L	GCAACTAGTGCGG	.	73.0	5.0	66.0	0.0	.	0	1	Atlas-SNP
MUC2	4583	hgsc.bcm.edu	37	11	1092884	1092884	+	Missense_Mutation	SNP	C	C	T	rs201415503		TCGA-YU-A90S-01A-11D-A435-10	TCGA-YU-A90S-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	786db3db-1833-4d7f-8168-a9f029de4c19	d44ef07d-f21c-4327-893b-536b55976470	MUC2_ENST00000441003,NS,carcinoma,0,8	MUC2_ENST00000441003	NM_002457	exon30	c.C4703T	p.T1568M	CCACCACGGTGAC	.	69.0	3.0	62.0	2.0	.	0	8	Atlas-SNP
BCL11B	64919	hgsc.bcm.edu	37	14	99641568	99641568	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-YU-A90S-01A-11D-A435-10	TCGA-YU-A90S-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	786db3db-1833-4d7f-8168-a9f029de4c19	d44ef07d-f21c-4327-893b-536b55976470	BCL11B,colon,carcinoma,0,1	BCL11B	NM_138576	exon4	c.G1605C	p.E535D	CTCCTCCTCGTCC	.	16.0	2.0	14.0	0.0	.	0	1	Atlas-SNP
