Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	Algorithm
C1orf56	54964	hgsc.bcm.edu	37	1	151020692	151020701	+	Frame_Shift_Del	DEL	GCTTCCCAGT	GCTTCCCAGT	-	novel		TCGA-ZM-AA0B-01A-11D-A435-10	TCGA-ZM-AA0B-10A-01D-A438-10	GCTTCCCAGT	GCTTCCCAGT	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	084a80d6-bc9b-40e7-8964-49d8f56e651f	c4912418-4a95-409b-8512-ac4c94533b97	.	C1orf56	NM_017860	exon1	c.368_377del	p.123_126del	.	.	57.0	25.0	74.0	0.0	.	25	.	Pindel,Atlas-Indel
ARL2BP	23568	hgsc.bcm.edu	37	16	57283712	57283712	+	Silent	SNP	C	C	T	novel		TCGA-ZM-AA0B-01A-11D-A435-10	TCGA-ZM-AA0B-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	084a80d6-bc9b-40e7-8964-49d8f56e651f	c4912418-4a95-409b-8512-ac4c94533b97	.	.	NM_012106	exon4	c.C241T	p.L81L	GAACAGCTGCTGC	.	58.0	7.0	62.0	0.0	.	.	.	Atlas-SNP
ZNF585A	199704	hgsc.bcm.edu	37	19	37643935	37643935	+	Missense_Mutation	SNP	C	C	T	rs368991030		TCGA-ZM-AA0B-01A-11D-A435-10	TCGA-ZM-AA0B-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	084a80d6-bc9b-40e7-8964-49d8f56e651f	c4912418-4a95-409b-8512-ac4c94533b97	ZNF585A,colon,carcinoma,0,1	ZNF585A	NM_199126	exon6	c.G701A	p.R234Q	ATTCTTCGGTGTG	.	124.0	5.0	105.0	0.0	.	0	1	Atlas-SNP
CRY2	1408	hgsc.bcm.edu	37	11	45869127	45869127	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZM-AA0B-01A-11D-A435-10	TCGA-ZM-AA0B-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	084a80d6-bc9b-40e7-8964-49d8f56e651f	c4912418-4a95-409b-8512-ac4c94533b97	CRY2,colon,carcinoma,0,1	CRY2	NM_021117	exon1	c.G149T	p.R50L	GGTTCCGCAAAGG	.	20.0	2.0	20.0	0.0	.	0	1	Atlas-SNP
EIF2B2	8892	hgsc.bcm.edu	37	14	75475839	75475839	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-ZM-AA0B-01A-11D-A435-10	TCGA-ZM-AA0B-10A-01D-A438-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	084a80d6-bc9b-40e7-8964-49d8f56e651f	c4912418-4a95-409b-8512-ac4c94533b97	.	.	NM_014239	exon8	c.A1004G	p.Y335C	CTTCCTACATCTA	.	120.0	31.0	182.0	0.0	.	.	.	Atlas-SNP
KCNH5	27133	hgsc.bcm.edu	37	14	63447863	63447863	+	Silent	SNP	A	A	G	novel		TCGA-ZM-AA0B-01A-11D-A435-10	TCGA-ZM-AA0B-10A-01D-A438-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	084a80d6-bc9b-40e7-8964-49d8f56e651f	c4912418-4a95-409b-8512-ac4c94533b97	.	.	NM_172375	exon6	c.T669C	p.I223I	GGTAAGAATTAAA	.	86.0	14.0	104.0	0.0	.	.	.	Atlas-SNP
FUT8	2530	hgsc.bcm.edu	37	14	66028473	66028473	+	Silent	SNP	C	C	T	rs372888976		TCGA-ZM-AA0B-01A-11D-A435-10	TCGA-ZM-AA0B-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	084a80d6-bc9b-40e7-8964-49d8f56e651f	c4912418-4a95-409b-8512-ac4c94533b97	.	.	NM_178155	exon3	c.C192T	p.A64A	AATGGCCGAATCT	.	50.0	5.0	51.0	0.0	.	.	.	Atlas-SNP
DSPP	1834	hgsc.bcm.edu	37	4	88536437	88536437	+	Missense_Mutation	SNP	A	A	G	rs200670885		TCGA-ZM-AA0B-01A-11D-A435-10	TCGA-ZM-AA0B-10A-01D-A438-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	084a80d6-bc9b-40e7-8964-49d8f56e651f	c4912418-4a95-409b-8512-ac4c94533b97	.	.	NM_014208	exon5	c.A2623G	p.N875D	AGCAGCAACAGCA	.	71.0	4.0	108.0	0.0	.	.	.	Atlas-SNP
RBM33	155435	hgsc.bcm.edu	37	7	155556646	155556646	+	Silent	SNP	G	G	T	novel		TCGA-ZM-AA0B-01A-11D-A435-10	TCGA-ZM-AA0B-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	084a80d6-bc9b-40e7-8964-49d8f56e651f	c4912418-4a95-409b-8512-ac4c94533b97	.	.	NM_053043	exon15	c.G3120T	p.G1040G	AGCGGGGCCCCAC	.	101.0	23.0	182.0	0.0	.	.	.	Atlas-SNP
ATP13A2	23400	hgsc.bcm.edu	37	1	17312499	17312499	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ZM-AA0B-01A-11D-A435-10	TCGA-ZM-AA0B-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	084a80d6-bc9b-40e7-8964-49d8f56e651f	c4912418-4a95-409b-8512-ac4c94533b97	.	.	NM_001141974	exon27	c.C3458T	p.S1153L	AGCACTGAGGGGA	.	42.0	10.0	54.0	0.0	.	.	.	Atlas-SNP
MIR3134	100422990	hgsc.bcm.edu	37	9	115060100	115060100	+	RNA	SNP	A	A	C	rs7870091	bycluster;byfrequency;by2hit2allele	TCGA-ZM-AA0B-01A-11D-A435-10	TCGA-ZM-AA0B-10A-01D-A438-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	084a80d6-bc9b-40e7-8964-49d8f56e651f	c4912418-4a95-409b-8512-ac4c94533b97	.	.	.	.	.	.	AAAAAAAAAAAAA	.	53.0	8.0	24.0	0.0	0.019	.	.	Atlas-SNP
HELZ	9931	hgsc.bcm.edu	37	17	65119087	65119087	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-ZM-AA0B-01A-11D-A435-10	TCGA-ZM-AA0B-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	084a80d6-bc9b-40e7-8964-49d8f56e651f	c4912418-4a95-409b-8512-ac4c94533b97	.	.	NM_014877	exon26	c.C3629G	p.P1210R	CTTACAGGTAAAG	.	93.0	17.0	88.0	0.0	.	.	.	Atlas-SNP
ATP6V1C2	245973	hgsc.bcm.edu	37	2	10908882	10908882	+	Missense_Mutation	SNP	C	C	T	rs201753402	by1000genomes	TCGA-ZM-AA0B-01A-11D-A435-10	TCGA-ZM-AA0B-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	084a80d6-bc9b-40e7-8964-49d8f56e651f	c4912418-4a95-409b-8512-ac4c94533b97	.	.	NM_001039362	exon6	c.C416T	p.T139M	CCCGAACGGCCGC	.	55.0	9.0	102.0	0.0	0.000	.	.	Atlas-SNP
DDX17	10521	hgsc.bcm.edu	37	22	38895499	38895499	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-ZM-AA0B-01A-11D-A435-10	TCGA-ZM-AA0B-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	084a80d6-bc9b-40e7-8964-49d8f56e651f	c4912418-4a95-409b-8512-ac4c94533b97	.	.	NM_006386	exon3	c.G444C	p.E148D	ATCAACCTCATAC	.	105.0	18.0	98.0	0.0	.	.	.	Atlas-SNP
ZNF653	115950	hgsc.bcm.edu	37	19	11597957	11597957	+	Silent	SNP	G	G	A	novel		TCGA-ZM-AA0B-01A-11D-A435-10	TCGA-ZM-AA0B-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	084a80d6-bc9b-40e7-8964-49d8f56e651f	c4912418-4a95-409b-8512-ac4c94533b97	.	.	NM_138783	exon5	c.C1188T	p.C396C	TAGCAAGCACAGG	.	51.0	19.0	47.0	0.0	.	.	.	Atlas-SNP
ACOT9	23597	hgsc.bcm.edu	37	X	23740077	23740077	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ZM-AA0B-01A-11D-A435-10	TCGA-ZM-AA0B-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	084a80d6-bc9b-40e7-8964-49d8f56e651f	c4912418-4a95-409b-8512-ac4c94533b97	.	.	NM_001037171	exon8	c.C509T	p.P170L	TGTTCTGGGCTCA	.	67.0	19.0	72.0	0.0	.	.	.	Atlas-SNP
