Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	Algorithm
GRM5	2915	hgsc.bcm.edu	37	11	88338026	88338026	+	Silent	SNP	G	G	A	novel		TCGA-ZM-AA0N-01A-21D-A435-10	TCGA-ZM-AA0N-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a14779a4-7bb5-4393-bf69-2fb981af9662	d558f583-6c20-4f1d-a431-dda54d4d3f05	.	.	NM_000842	exon5	c.C1254T	p.L418L	TGGGCAGAGGGAC	.	110.0	18.0	110.0	0.0	.	.	.	Atlas-SNP
SLC18A1	6570	hgsc.bcm.edu	37	8	20005148	20005148	+	Silent	SNP	G	G	A	novel		TCGA-ZM-AA0N-01A-21D-A435-10	TCGA-ZM-AA0N-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a14779a4-7bb5-4393-bf69-2fb981af9662	d558f583-6c20-4f1d-a431-dda54d4d3f05	.	.	NM_003053	exon14	c.C1296T	p.I432I	ATCAGCGATGGCG	.	172.0	12.0	133.0	0.0	.	.	.	Atlas-SNP
FAM83B	222584	hgsc.bcm.edu	37	6	54806767	54806767	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-ZM-AA0N-01A-21D-A435-10	TCGA-ZM-AA0N-10A-01D-A438-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a14779a4-7bb5-4393-bf69-2fb981af9662	d558f583-6c20-4f1d-a431-dda54d4d3f05	.	.	NM_001010872	exon5	c.A2998G	p.M1000V	GGATTTATGCAAA	.	137.0	21.0	127.0	0.0	.	.	.	Atlas-SNP
CYTB	0	hgsc.bcm.edu	37	MT	15831	15831	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-ZM-AA0N-01A-21D-A435-10	TCGA-ZM-AA0N-10A-01D-A438-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a14779a4-7bb5-4393-bf69-2fb981af9662	d558f583-6c20-4f1d-a431-dda54d4d3f05	.	.	ENST00000361789	exon1	c.T1085C	p.I362T	CAACAATCCTAAT	.	14.0	12.0	13.0	0.0	.	.	.	Atlas-SNP
ADAM22	53616	hgsc.bcm.edu	37	7	87780609	87780609	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-ZM-AA0N-01A-21D-A435-10	TCGA-ZM-AA0N-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a14779a4-7bb5-4393-bf69-2fb981af9662	d558f583-6c20-4f1d-a431-dda54d4d3f05	.	.	NM_021722	exon20	c.G1655C	p.R552T	GAGATAGACAATG	.	110.0	7.0	110.0	0.0	.	.	.	Atlas-SNP
HRC	3270	hgsc.bcm.edu	37	19	49657751	49657751	+	Silent	SNP	A	A	G	novel		TCGA-ZM-AA0N-01A-21D-A435-10	TCGA-ZM-AA0N-10A-01D-A438-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a14779a4-7bb5-4393-bf69-2fb981af9662	d558f583-6c20-4f1d-a431-dda54d4d3f05	HRC,caecum,carcinoma,0,1	HRC	NM_002152	exon1	c.T744C	p.D248D	ATCATCATCGTCA	.	52.0	5.0	60.0	0.0	.	0	1	Atlas-SNP
EMID1	129080	hgsc.bcm.edu	37	22	29654850	29654850	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-ZM-AA0N-01A-21D-A435-10	TCGA-ZM-AA0N-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a14779a4-7bb5-4393-bf69-2fb981af9662	d558f583-6c20-4f1d-a431-dda54d4d3f05	.	.	NM_133455	exon15	c.C1249A	p.P417T	GGCACCCCCAGCC	.	81.0	9.0	58.0	0.0	.	.	.	Atlas-SNP
GABRG2	2566	hgsc.bcm.edu	37	5	161528257	161528257	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ZM-AA0N-01A-21D-A435-10	TCGA-ZM-AA0N-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a14779a4-7bb5-4393-bf69-2fb981af9662	d558f583-6c20-4f1d-a431-dda54d4d3f05	.	.	NM_198904	exon5	c.G565A	p.E189K	GATGCTGAGTGCC	.	52.0	8.0	74.0	0.0	.	.	.	Atlas-SNP
MIR3134	100422990	hgsc.bcm.edu	37	9	115060100	115060100	+	RNA	SNP	A	A	C	rs7870091	bycluster;byfrequency;by2hit2allele	TCGA-ZM-AA0N-01A-21D-A435-10	TCGA-ZM-AA0N-10A-01D-A438-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a14779a4-7bb5-4393-bf69-2fb981af9662	d558f583-6c20-4f1d-a431-dda54d4d3f05	.	.	.	.	.	.	AAAAAAAAAAAAA	.	33.0	6.0	39.0	0.0	0.019	.	.	Atlas-SNP
EPS8L3	79574	hgsc.bcm.edu	37	1	110300454	110300454	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-ZM-AA0N-01A-21D-A435-10	TCGA-ZM-AA0N-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a14779a4-7bb5-4393-bf69-2fb981af9662	d558f583-6c20-4f1d-a431-dda54d4d3f05	.	.	NM_139053	exon10	c.C867A	p.F289L	CTTCTGGAAGCAG	.	164.0	27.0	124.0	0.0	.	.	.	Atlas-SNP
KIF9-AS1	285352	hgsc.bcm.edu	37	3	47276935	47276935	+	RNA	SNP	G	G	C	novel		TCGA-ZM-AA0N-01A-21D-A435-10	TCGA-ZM-AA0N-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a14779a4-7bb5-4393-bf69-2fb981af9662	d558f583-6c20-4f1d-a431-dda54d4d3f05	.	.	.	.	.	.	AGTAGGGAATATG	.	42.0	7.0	61.0	0.0	.	.	.	Atlas-SNP
USP19	10869	hgsc.bcm.edu	37	3	49146542	49146542	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ZM-AA0N-01A-21D-A435-10	TCGA-ZM-AA0N-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a14779a4-7bb5-4393-bf69-2fb981af9662	d558f583-6c20-4f1d-a431-dda54d4d3f05	.	.	NM_001199160	exon27	c.G4109A	p.G1370E	TGGGGCCCCCAGG	.	142.0	22.0	187.0	0.0	.	.	.	Atlas-SNP
ARL2	402	hgsc.bcm.edu	37	11	64786160	64786160	+	Silent	SNP	C	C	T	novel		TCGA-ZM-AA0N-01A-21D-A435-10	TCGA-ZM-AA0N-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a14779a4-7bb5-4393-bf69-2fb981af9662	d558f583-6c20-4f1d-a431-dda54d4d3f05	ARL2,NS,carcinoma,+1,1	ARL2	NM_001667	exon3	c.C294T	p.R98R	CCAGCGCATGCAG	.	43.0	7.0	53.0	0.0	.	+1	1	Atlas-SNP
ND4	0	hgsc.bcm.edu	37	MT	11324	11324	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-ZM-AA0N-01A-21D-A435-10	TCGA-ZM-AA0N-10A-01D-A438-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a14779a4-7bb5-4393-bf69-2fb981af9662	d558f583-6c20-4f1d-a431-dda54d4d3f05	.	.	ENST00000361381	exon1	c.T565C	p.S189P	TCAAACTCCTGAG	.	29.0	12.0	11.0	0.0	.	.	.	Atlas-SNP
DHDH	27294	hgsc.bcm.edu	37	19	49442835	49442835	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-ZM-AA0N-01A-21D-A435-10	TCGA-ZM-AA0N-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a14779a4-7bb5-4393-bf69-2fb981af9662	d558f583-6c20-4f1d-a431-dda54d4d3f05	.	.	NM_014475	exon4	c.G496C	p.D166H	GCCGTAGACCGGG	.	87.0	13.0	79.0	0.0	.	.	.	Atlas-SNP
HSH2D	84941	hgsc.bcm.edu	37	19	16263920	16263920	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-ZM-AA0N-01A-21D-A435-10	TCGA-ZM-AA0N-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a14779a4-7bb5-4393-bf69-2fb981af9662	d558f583-6c20-4f1d-a431-dda54d4d3f05	.	.	NM_032855	exon6	c.G283A	p.E95K	CCCGGGGAGAAGG	.	74.0	15.0	47.0	0.0	.	.	.	Atlas-SNP
ACER3	55331	hgsc.bcm.edu	37	11	76726118	76726118	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-ZM-AA0N-01A-21D-A435-10	TCGA-ZM-AA0N-10A-01D-A438-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a14779a4-7bb5-4393-bf69-2fb981af9662	d558f583-6c20-4f1d-a431-dda54d4d3f05	.	.	NM_018367	exon8	c.T556C	p.F186L	TTGGGATTTTTAT	.	38.0	7.0	51.0	0.0	.	.	.	Atlas-SNP
TTC40	54777	hgsc.bcm.edu	37	10	134663865	134663865	+	Silent	SNP	G	G	A	novel		TCGA-ZM-AA0N-01A-21D-A435-10	TCGA-ZM-AA0N-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a14779a4-7bb5-4393-bf69-2fb981af9662	d558f583-6c20-4f1d-a431-dda54d4d3f05	.	.	NM_001200049	exon41	c.C5835T	p.S1945S	GCCCACGCTCAGC	.	101.0	12.0	116.0	0.0	.	.	.	Atlas-SNP
GDAP1	54332	hgsc.bcm.edu	37	8	75272458	75272458	+	Missense_Mutation	SNP	A	A	T	rs368695731	alternate_allele	TCGA-ZM-AA0N-01A-21D-A435-10	TCGA-ZM-AA0N-10A-01D-A438-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a14779a4-7bb5-4393-bf69-2fb981af9662	d558f583-6c20-4f1d-a431-dda54d4d3f05	.	.	NM_018972	exon3	c.A397T	p.M133L	TTGCCAATGGATG	.	79.0	8.0	86.0	0.0	.	.	.	Atlas-SNP
OXA1L	5018	hgsc.bcm.edu	37	14	23239418	23239418	+	Silent	SNP	G	G	A	novel		TCGA-ZM-AA0N-01A-21D-A435-10	TCGA-ZM-AA0N-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a14779a4-7bb5-4393-bf69-2fb981af9662	d558f583-6c20-4f1d-a431-dda54d4d3f05	.	.	NM_005015	exon5	c.G780A	p.S260S	TTCCTCGGAGATG	.	117.0	9.0	98.0	0.0	.	.	.	Atlas-SNP
BEND3	57673	hgsc.bcm.edu	37	6	107389963	107389963	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-ZM-AA0N-01A-21D-A435-10	TCGA-ZM-AA0N-10A-01D-A438-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a14779a4-7bb5-4393-bf69-2fb981af9662	d558f583-6c20-4f1d-a431-dda54d4d3f05	.	.	NM_001080450	exon5	c.G2432A	p.R811H	TTGGGGCGGCGGC	.	73.0	13.0	69.0	0.0	.	.	.	Atlas-SNP
DENND6A	201627	hgsc.bcm.edu	37	3	57631406	57631406	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-ZM-AA0N-01A-21D-A435-10	TCGA-ZM-AA0N-10A-01D-A438-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a14779a4-7bb5-4393-bf69-2fb981af9662	d558f583-6c20-4f1d-a431-dda54d4d3f05	.	.	NM_152678	exon11	c.C1019G	p.T340S	CGGGTAGTATATT	.	55.0	12.0	44.0	0.0	.	.	.	Atlas-SNP
