Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	transcript_name	strand	transcript_status	amino_acid_change	ucsc_cons	normal_depth	normal_vaf	tumor_depth	tumor_vaf	rna_depth	rna_vaf	polyphen	sift	condel	domain
CNR2	1269	genome.wustl.edu	37	1	24201513	24201513	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_001841.2	-1	reviewed	p.A199T	0.000	124	0%	123	48%	0	-	benign(0.058)	tolerated(0.42)	neutral(0.018)	HMMPfam_7tm_1,superfamily_SSF81321
EPHA10	284656	genome.wustl.edu	37	1	38227215	38227215	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_001099439.1	-1	validated	p.G238R	1.000	25	0%	42	31%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
POGZ	23126	genome.wustl.edu	37	1	151378183	151378183	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_015100.2	-1	reviewed	p.R1110W	1.000	93	0%	131	27.5%	46	32.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ADAM15	8751	genome.wustl.edu	37	1	155030437	155030437	+	Silent	SNP	C	C	T	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_207197.1	+1	reviewed	p.G509	0.072	56	0%	134	29.9%	118	27.9%	-	-	-	HMMPfam_ADAM_CR,HMMSmart_SM00608
NCSTN	23385	genome.wustl.edu	37	1	160319913	160319913	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_015331.2	+1	reviewed	p.Y152F	0.978	359	0%	378	52.9%	50	62%	probably_damaging(0.991)	tolerated(0.14)	deleterious(0.694)	NULL
CFH	3075	genome.wustl.edu	37	1	196648907	196648907	+	Silent	SNP	G	G	A	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_000186.3	+1	reviewed	p.P258	0.001	229	0%	171	52%	43	69.7%	-	-	-	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
ST3GAL5	8869	genome.wustl.edu	37	2	86075105	86075105	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_003896.3	-1	reviewed	p.H181Y	0.865	184	0%	138	33.3%	4	75%	benign(0)	tolerated(1)	-	HMMPfam_Glyco_transf_29
TPRXL	348825	genome.wustl.edu	37	3	14106103	14106103	+	Missense_Mutation	SNP	A	A	T	rs144265507	by1000genomes	TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	ENST00000326972	+1	known	p.S143C	0.965	8	0.000	12	0.583	0	-	unknown(0)	-	-	NULL
ADCY5	111	genome.wustl.edu	37	3	123038612	123038612	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_183357.1	-1	validated	p.R722H	1.000	103	0%	137	37.2%	1	0%	probably_damaging(0.979)	tolerated(0.13)	deleterious(0.674)	HMMPfam_DUF1053
PIK3CA	5290	genome.wustl.edu	37	3	178921553	178921553	+	Missense_Mutation	SNP	T	T	A	rs121913284		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_006218.2	+1	reviewed	p.N345K	1.000	99	0%	87	35.6%	7	28.5%	probably_damaging(1)	tolerated(0.23)	deleterious(0.541)	HMMSmart_C2,HMMSmart_PI3K_C2,superfamily_C2_CaLB
PAIP1	10605	genome.wustl.edu	37	5	43547955	43547955	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_006451.4	-1	reviewed	p.L166V	1.000	240	0%	189	46.6%	44	40.9%	benign(0.008)	tolerated(0.19)	neutral(0.050)	HMMPfam_MIF4G,HMMSmart_SM00543,superfamily_ARM repeat
APC	324	genome.wustl.edu	37	5	112175618	112175618	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_000038.4	+1	reviewed	p.P1443fs	1.000	-	-	-	-	-	-	-	-	-	NULL
SLC36A1	206358	genome.wustl.edu	37	5	150838428	150838428	+	Silent	SNP	G	G	A	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_078483.2	+1	reviewed	p.P25	0.056	50	0%	41	43.9%	1	0%	-	-	-	NULL
TBC1D9B	23061	genome.wustl.edu	37	5	179294722	179294722	+	Silent	SNP	C	C	T	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	ENST00000444477	-1	known	p.P149	0.004	72	1.4%	71	36.6%	2	50%	-	-	-	NULL
CRIP3	401262	genome.wustl.edu	37	6	43273590	43273590	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_206922.2	-1	validated	p.C193R	1.000	118	0%	138	37.7%	0	-	possibly_damaging(0.805)	deleterious(0.04)	deleterious(0.652)	superfamily_SSF57716
FBXO5	26271	genome.wustl.edu	37	6	153296656	153296656	+	Silent	SNP	A	A	T	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_012177.3	-1	reviewed	p.I68	0.006	228	0.9%	182	44%	5	20%	-	-	-	NULL
C7orf66	154907	genome.wustl.edu	37	7	108524103	108524103	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_001024607.1	-1	predicted	p.S104fs	0.002	-	-	-	-	-	-	-	-	-	NULL
AKR1B15	441282	genome.wustl.edu	37	7	134260262	134260262	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_001080538.2	+1	validated	p.P174S	1.000	198	0%	167	36.5%	0	-	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMPfam_Aldo_ket_red,superfamily_NAD(P)-linked oxidoreductase
COMMD5	28991	genome.wustl.edu	37	8	146076491	146076491	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_001081003.1	-1	validated	p.P78L	0.003	11	0%	13	61.5%	31	51.6%	benign(0.003)	tolerated(0.07)	neutral(0.319)	HMMPfam_HCaRG
INVS	27130	genome.wustl.edu	37	9	103054845	103054845	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_014425.2	+1	reviewed	p.P769L	0.000	55	0%	44	40.9%	5	0%	benign(0)	tolerated(0.09)	neutral(0.296)	NULL
ABCA2	20	genome.wustl.edu	37	9	139917297	139917297	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_212533.2	-1	reviewed	p.R129H	1.000	17	0%	24	20.8%	5	60%	benign(0.009)	tolerated(0.06)	neutral(0.323)	NULL
PTEN	5728	genome.wustl.edu	37	10	89720719	89720719	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	ENST00000371953	+1	known	p.E291fs	1.000	-	-	-	-	-	-	-	-	-	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_PTEN_C2
PTEN	5728	genome.wustl.edu	37	10	89720805	89720808	+	Frame_Shift_Del	DEL	CTTT	CTTT	-	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	CTTT	CTTT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	ENST00000371953	+1	known	p.T319fs	1.000:0.999:1.000:1.000	-	-	-	-	-	-	-	-	-	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_PTEN_C2
KIF20B	9585	genome.wustl.edu	37	10	91497575	91497575	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_016195.2	+1	validated	p.R953fs	0.005	-	-	-	-	-	-	-	-	-	NULL
FRA10AC1	118924	genome.wustl.edu	37	10	95445036	95445036	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_145246.4	-1	reviewed	p.H198Y	1.000	532	0%	305	34.4%	29	51.7%	probably_damaging(0.983)	tolerated(0.09)	deleterious(0.726)	HMMPfam_Fra10Ac1
FRA10AC1	118924	genome.wustl.edu	37	10	95445037	95445037	+	Silent	SNP	C	C	T	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_145246.4	-1	reviewed	p.E197	1.000	529	0%	307	34.2%	30	53.3%	-	-	-	HMMPfam_Fra10Ac1
OR56B4	196335	genome.wustl.edu	37	11	6129905	6129905	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_001005181.1	+1	provisional	p.R299S	0.340	48	0%	55	38.2%	0	-	probably_damaging(0.98)	deleterious(0)	deleterious(0.869)	superfamily_SSF81321
ENSG00000181950	0	genome.wustl.edu	37	11	55234703	55234703	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	ENST00000314689	+1	known	p.H58N	0.096	121	0%	112	42.9%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
FAM55B	120406	genome.wustl.edu	37	11	114577408	114577408	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_182495.5	+1	validated	p.R479Q	0.881	144	0%	138	44.9%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
CDKL1	8814	genome.wustl.edu	37	14	50844367	50844368	+	Frame_Shift_Ins	INS	-	-	A	rs78942968	byCluster;by1000genomes	TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	ENST00000356146	-1	known	p.P478fs	0.013:0.018	-	-	-	-	-	-	-	-	-	NULL
WDR24	84219	genome.wustl.edu	37	16	739382	739382	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_032259.2	-1	provisional	p.E87K	1.000	52	0%	55	40%	12	41.6%	benign(0.003)	tolerated(0.36)	neutral(0.020)	HMMSmart_SM00320,superfamily_WD40 repeat-like
CTCF	10664	genome.wustl.edu	37	16	67654642	67654642	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_006565.2	+1	reviewed	p.R377C	1.000	131	0%	104	69.2%	19	89.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_C2H2 and C2HC zinc fingers
TUBG1	7283	genome.wustl.edu	37	17	40766431	40766431	+	Splice_Site	SNP	G	G	A	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_001070.4	+1	reviewed	e9+1	1.000	126	0%	137	30.7%	3	100%	-	-	-	-
C17orf72	92340	genome.wustl.edu	37	17	62075765	62075765	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	ENST00000425164	+1	known	p.P14R	0.001	4	0.000	7	0.571	0	-	benign(0.008)	tolerated(0.06)	neutral(0.323)	NULL
UNC13D	201294	genome.wustl.edu	37	17	73830485	73830485	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_199242.2	-1	reviewed	p.T740M	0.999	17	0%	15	33.3%	7	0%	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	NULL
ENSG00000175388	0	genome.wustl.edu	37	18	10773600	10773600	+	Silent	SNP	C	C	T	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	ENST00000383408	-1	known	p.P128	0.495	161	0%	147	34.7%	0	-	-	-	-	NULL
SPEF1	25876	genome.wustl.edu	37	20	3760358	3760358	+	Silent	SNP	G	G	A	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_015417.4	-1	validated	p.P58	0.944	166	0%	155	36.1%	2	100%	-	-	-	HMMPfam_DUF1042,superfamily_Calponin-homology domain CH-domain
UBASH3A	53347	genome.wustl.edu	37	21	43838614	43838614	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_018961.2	+1	validated	p.S314R	0.994	59	0%	68	42.6%	1	0%	probably_damaging(0.994)	deleterious(0.01)	deleterious(0.858)	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain
ABCD1	215	genome.wustl.edu	37	X	152990934	152990934	+	Silent	SNP	C	C	T	novel		TCGA-BG-A186-01A-11D-A12J-09	TCGA-BG-A186-10A-01D-A12J-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	be71dee6-f7e9-4b60-9b64-460e05d9e303	95e1c8fd-0ef8-4ebf-99ff-ca3265281d5d	NM_000033.3	+1	reviewed	p.F71	1.000	12	0%	12	41.7%	3	0%	-	-	-	HMMPfam_ABC_membrane_2
